BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.8
(338 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61038.1| S-ribonuclease binding protein SBP1, putative [Ar... 383 e-105
gb|AAO42398.1| putative S-ribonuclease binding protein SBP1 [Ara... 382 e-104
dbj|BAD95238.1| At1g10650 [Arabidopsis thaliana] 379 e-104
gb|AAF17669.1| F20B24.9 [Arabidopsis thaliana] 366 e-100
ref|NP_176260.1| expressed protein [Arabidopsis thaliana] gi|425... 363 3e-99
gb|AAB71973.1| Unknown protein [Arabidopsis thaliana] gi|2540427... 352 7e-96
ref|XP_463997.1| putative S-ribonuclease binding protein SBP1 [O... 236 6e-61
ref|XP_463998.1| putative S-ribonuclease binding protein SBP1 [O... 219 9e-56
ref|NP_912418.1| unknown protein [Oryza sativa (japonica cultiva... 188 2e-46
gb|AAF28357.2| S-ribonuclease binding protein SBP1 [Petunia x hy... 181 3e-44
gb|AAR92230.1| S-RNase-binding protein [Solanum chacoense] 177 3e-43
gb|AAS76633.1| S-RNase binding protein 1 [Solanum chacoense] 177 5e-43
gb|AAK15576.1| putative S-ribonuclease binding protein SBP1 [Ara... 164 5e-39
emb|CAB10548.1| hypothetical protein [Arabidopsis thaliana] gi|7... 145 1e-33
gb|AAM91645.1| unknown protein [Arabidopsis thaliana] gi|3068414... 145 1e-33
gb|AAM14227.1| unknown protein [Arabidopsis thaliana] gi|1738082... 135 2e-30
gb|AAM63608.1| unknown [Arabidopsis thaliana] gi|18398566|ref|NP... 133 9e-30
ref|XP_467205.1| S-ribonuclease binding protein SBP1-like [Oryza... 131 3e-29
gb|AAF25971.1| F6N18.12 [Arabidopsis thaliana] 125 2e-27
gb|AAM65075.1| inhibitor of apoptosis-like protein [Arabidopsis ... 122 1e-26
>gb|AAM61038.1| S-ribonuclease binding protein SBP1, putative [Arabidopsis
thaliana]
Length = 337
Score = 383 bits (983), Expect = e-105
Identities = 197/351 (56%), Positives = 256/351 (72%), Gaps = 27/351 (7%)
Query: 1 MFGGNNGNRLLPVFLDENQFQCQTNA-TNQLQLFGNLQAGRNVDPVSYIGNEHISSMIQP 59
M GNNGN PVF++ENQ Q QTN +NQL L GN+ G VDPV+Y N+++ MI+P
Sbjct: 1 MLSGNNGNTAPPVFMNENQLQYQTNLRSNQLHLLGNMGGGCTVDPVNYFANDNLVPMIRP 60
Query: 60 NKRSREMEDIS-----KKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERN 114
NKR RE E IS ++Q+LQ+SLNYN ++ +P N +STGLRLSYDDDE N
Sbjct: 61 NKRGREAESISNNIQRQQQKLQMSLNYNY--NNTSVREEVPKENLVSTGLRLSYDDDEHN 118
Query: 115 SSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMAS 174
SSVTSASGS+ A I SL D++R +L RQ++E D +IK+Q Q+++GVRDMKQ+H+AS
Sbjct: 119 SSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIAS 178
Query: 175 LLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRN 234
LT++EKG+ KKL+EK+ EI +MN+KN+EL ERIKQVA+EAQNWHYRAKYNESVVN L+
Sbjct: 179 FLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKA 238
Query: 235 NLQQAISH------GVEQGKEGFGDSEVDDAA-SYIDPNNFLSIPGAPMKSIHPRYQGME 287
NLQQA+SH +QGKEGFGDSE+DDAA SYIDPNN ++ IH R
Sbjct: 239 NLQQAMSHNNSVIAAADQGKEGFGDSEIDDAASSYIDPNNNNNM------GIHQR----- 287
Query: 288 NLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYLS 338
+ C+ C K+VS+L++PCRHLSLCK+CD F +CPVC+ +K++ V+V+ S
Sbjct: 288 -MRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS 337
>gb|AAO42398.1| putative S-ribonuclease binding protein SBP1 [Arabidopsis thaliana]
gi|27754499|gb|AAO22697.1| putative S-ribonuclease
binding protein SBP1 [Arabidopsis thaliana]
gi|15220181|ref|NP_172535.1| expressed protein
[Arabidopsis thaliana] gi|67037423|gb|AAY63560.1| RING
domain protein [Arabidopsis thaliana]
Length = 339
Score = 382 bits (980), Expect = e-104
Identities = 197/351 (56%), Positives = 254/351 (72%), Gaps = 25/351 (7%)
Query: 1 MFGGNNGNRLLPVFLDENQFQCQTNA-TNQLQLFGNLQAGRNVDPVSYIGNEHISSMIQP 59
M GNNGN PVF++ENQ Q QTN +NQL L GN+ G VDPV+Y N+++ MI+P
Sbjct: 1 MLSGNNGNTAPPVFMNENQLQYQTNLRSNQLHLLGNMGGGCTVDPVNYFANDNLVPMIRP 60
Query: 60 NKRSREMEDIS-----KKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERN 114
NKR RE E IS ++Q+LQ+SLNYN ++ +P N +STGLRLSYDDDE N
Sbjct: 61 NKRGREAESISNNIQRQQQKLQMSLNYNY--NNTSVREEVPKENLVSTGLRLSYDDDEHN 118
Query: 115 SSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMAS 174
SSVTSASGS+ A I SL D++R +L RQ++E D +IK+Q Q+++GVRDMKQ+H+AS
Sbjct: 119 SSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIAS 178
Query: 175 LLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRN 234
LT++EKG+ KKL+EK+ EI +MN+KN+EL ERIKQVA+EAQNWHYRAKYNESVVN L+
Sbjct: 179 FLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKA 238
Query: 235 NLQQAISH------GVEQGKEGFGDSEVDDAA-SYIDPNNFLSIPGAPMKSIHPRYQGME 287
NLQQA+SH +QGKEGFGDSE+DDAA SYIDPNN IH R
Sbjct: 239 NLQQAMSHNNSVIAAADQGKEGFGDSEIDDAASSYIDPNN----NNNNNMGIHQR----- 289
Query: 288 NLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYLS 338
+ C+ C K+VS+L++PCRHLSLCK+CD F +CPVC+ +K++ V+V+ S
Sbjct: 290 -MRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS 339
>dbj|BAD95238.1| At1g10650 [Arabidopsis thaliana]
Length = 339
Score = 379 bits (974), Expect = e-104
Identities = 196/351 (55%), Positives = 253/351 (71%), Gaps = 25/351 (7%)
Query: 1 MFGGNNGNRLLPVFLDENQFQCQTNA-TNQLQLFGNLQAGRNVDPVSYIGNEHISSMIQP 59
M GNNGN PVF++ENQ Q QTN +NQL GN+ G VDPV+Y N+++ MI+P
Sbjct: 1 MLSGNNGNTAPPVFMNENQLQYQTNLRSNQLHSLGNMGGGCTVDPVNYFANDNLVPMIRP 60
Query: 60 NKRSREMEDIS-----KKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERN 114
NKR RE E IS ++Q+LQ+SLNYN ++ +P N +STGLRLSYDDDE N
Sbjct: 61 NKRGREAESISNNIQRQQQKLQMSLNYNY--NNTSVREEVPKENLVSTGLRLSYDDDEHN 118
Query: 115 SSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMAS 174
SSVTSASGS+ A I SL D++R +L RQ++E D +IK+Q Q+++GVRDMKQ+H+AS
Sbjct: 119 SSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIAS 178
Query: 175 LLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRN 234
LT++EKG+ KKL+EK+ EI +MN+KN+EL ERIKQVA+EAQNWHYRAKYNESVVN L+
Sbjct: 179 FLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKA 238
Query: 235 NLQQAISH------GVEQGKEGFGDSEVDDAA-SYIDPNNFLSIPGAPMKSIHPRYQGME 287
NLQQA+SH +QGKEGFGDSE+DDAA SYIDPNN IH R
Sbjct: 239 NLQQAMSHNNSVIAAADQGKEGFGDSEIDDAASSYIDPNN----NNNNNMGIHQR----- 289
Query: 288 NLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYLS 338
+ C+ C K+VS+L++PCRHLSLCK+CD F +CPVC+ +K++ V+V+ S
Sbjct: 290 -MRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS 339
>gb|AAF17669.1| F20B24.9 [Arabidopsis thaliana]
Length = 368
Score = 366 bits (940), Expect = e-100
Identities = 197/380 (51%), Positives = 254/380 (66%), Gaps = 54/380 (14%)
Query: 1 MFGGNNGNRLLPVFLDENQFQCQTNA-TNQLQLFGNLQAGRNVDPVSYIGNEHISSMIQP 59
M GNNGN PVF++ENQ Q QTN +NQL L GN+ G VDPV+Y N+++ MI+P
Sbjct: 1 MLSGNNGNTAPPVFMNENQLQYQTNLRSNQLHLLGNMGGGCTVDPVNYFANDNLVPMIRP 60
Query: 60 NKRSREMEDIS-----KKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERN 114
NKR RE E IS ++Q+LQ+SLNYN ++ +P N +STGLRLSYDDDE N
Sbjct: 61 NKRGREAESISNNIQRQQQKLQMSLNYNY--NNTSVREEVPKENLVSTGLRLSYDDDEHN 118
Query: 115 SSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQ------------------ 156
SSVTSASGS+ A I SL D++R +L RQ++E D +IK+Q
Sbjct: 119 SSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFIKIQVLIVSACRLCFYVKRFFD 178
Query: 157 -----------KEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELA 205
Q+++GVRDMKQ+H+AS LT++EKG+ KKL+EK+ EI +MN+KN+EL
Sbjct: 179 SNVFVCFYVVQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQEKDHEINDMNKKNKELV 238
Query: 206 ERIKQVAVEAQNWHYRAKYNESVVNALRNNLQQAISH------GVEQGKEGFGDSEVDDA 259
ERIKQVA+EAQNWHYRAKYNESVVN L+ NLQQA+SH +QGKEGFGDSE+DDA
Sbjct: 239 ERIKQVAMEAQNWHYRAKYNESVVNVLKANLQQAMSHNNSVIAAADQGKEGFGDSEIDDA 298
Query: 260 A-SYIDPNNFLSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGF 318
A SYIDPNN IH R + C+ C K+VS+L++PCRHLSLCK+CD F
Sbjct: 299 ASSYIDPNN----NNNNNMGIHQR------MRCKMCNVKEVSVLIVPCRHLSLCKECDVF 348
Query: 319 INVCPVCQMIKTASVEVYLS 338
+CPVC+ +K++ V+V+ S
Sbjct: 349 TKICPVCKSLKSSCVQVFFS 368
>ref|NP_176260.1| expressed protein [Arabidopsis thaliana]
gi|42571929|ref|NP_974055.1| expressed protein
[Arabidopsis thaliana] gi|66865906|gb|AAY57587.1| RING
finger family protein [Arabidopsis thaliana]
Length = 340
Score = 363 bits (933), Expect = 3e-99
Identities = 189/354 (53%), Positives = 257/354 (72%), Gaps = 34/354 (9%)
Query: 1 MFGGNNGNRLLPVFLDENQFQCQTNAT-NQLQLFGNLQAGRNVDPVSYIGNEHISSMIQP 59
M GGNN N + V ++++QF+ Q+N + NQL L G ++AG +DPV+Y N++++ M++
Sbjct: 1 MLGGNNDNPVPQVLMNDSQFRYQSNTSLNQLHLLGTMRAGCTIDPVNYFANDNLAPMMRL 60
Query: 60 NK-RSREMED---ISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNS 115
N R RE E+ + ++Q+LQISLNYN ++ +P N +STGLRLSYDDDERNS
Sbjct: 61 NSTRGRETENNNIMQRQQKLQISLNYNYNNNNTVVQDEVPKQNLVSTGLRLSYDDDERNS 120
Query: 116 SVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASL 175
SVTSA+GS+T P + SLGDNIR +L+RQ +ELD +IK + +Q+++GVRD+KQ+H+ S
Sbjct: 121 SVTSANGSITTP--VYQSLGDNIRLDLNRQNDELDQFIKFRADQMAKGVRDIKQRHVTSF 178
Query: 176 LTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNN 235
+T++EK + KKL+EK+ EIE+MN+KNREL ++IKQVAVEAQNWHY+AKYNESVVNAL+ N
Sbjct: 179 VTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVN 238
Query: 236 LQQAISHGVE------------QGKEGFGDSEVDD-AASYIDPNNFLSIPGAPMKSIHPR 282
LQQ +SHG + Q KEGFGDSE+DD AASY N+L+IPG P
Sbjct: 239 LQQVMSHGNDNNAVGGGVADHHQMKEGFGDSEIDDEAASY----NYLNIPGMP------- 287
Query: 283 YQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVY 336
+ C+ C K+VS+LL+PCRHLSLCKDCD F VCPVCQ +KT+SV+V+
Sbjct: 288 ---STGMRCKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVF 338
>gb|AAB71973.1| Unknown protein [Arabidopsis thaliana] gi|25404279|pir||C96631
hypothetical protein F8A5.13 [imported] - Arabidopsis
thaliana
Length = 372
Score = 352 bits (904), Expect = 7e-96
Identities = 183/342 (53%), Positives = 250/342 (72%), Gaps = 34/342 (9%)
Query: 13 VFLDENQFQCQTNAT-NQLQLFGNLQAGRNVDPVSYIGNEHISSMIQPNK-RSREMED-- 68
V ++++QF+ Q+N + NQL L G ++AG +DPV+Y N++++ M++ N R RE E+
Sbjct: 45 VLMNDSQFRYQSNTSLNQLHLLGTMRAGCTIDPVNYFANDNLAPMMRLNSTRGRETENNN 104
Query: 69 -ISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNSSVTSASGSMTAP 127
+ ++Q+LQISLNYN ++ +P N +STGLRLSYDDDERNSSVTSA+GS+T P
Sbjct: 105 IMQRQQKLQISLNYNYNNNNTVVQDEVPKQNLVSTGLRLSYDDDERNSSVTSANGSITTP 164
Query: 128 PSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLLTSIEKGIVKKL 187
+ SLGDNIR +L+RQ +ELD +IK + +Q+++GVRD+KQ+H+ S +T++EK + KKL
Sbjct: 165 --VYQSLGDNIRLDLNRQNDELDQFIKFRADQMAKGVRDIKQRHVTSFVTALEKDVSKKL 222
Query: 188 REKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNNLQQAISHGVE-- 245
+EK+ EIE+MN+KNREL ++IKQVAVEAQNWHY+AKYNESVVNAL+ NLQQ +SHG +
Sbjct: 223 QEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSHGNDNN 282
Query: 246 ----------QGKEGFGDSEVDD-AASYIDPNNFLSIPGAPMKSIHPRYQGMENLSCRAC 294
Q KEGFGDSE+DD AASY N+L+IPG P + C+ C
Sbjct: 283 AVGGGVADHHQMKEGFGDSEIDDEAASY----NYLNIPGMP----------STGMRCKLC 328
Query: 295 KAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVY 336
K+VS+LL+PCRHLSLCKDCD F VCPVCQ +KT+SV+V+
Sbjct: 329 NVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVF 370
>ref|XP_463997.1| putative S-ribonuclease binding protein SBP1 [Oryza sativa
(japonica cultivar-group)] gi|41052555|dbj|BAD07737.1|
putative S-ribonuclease binding protein SBP1 [Oryza
sativa (japonica cultivar-group)]
Length = 343
Score = 236 bits (603), Expect = 6e-61
Identities = 141/346 (40%), Positives = 217/346 (61%), Gaps = 15/346 (4%)
Query: 1 MFGGNNGNRLLPV--FLDENQFQCQTNATN-QLQLFGN--LQAGRNVDPVSYIGNEHISS 55
MFG + P E+QF A+ QLQLFG+ + A + +YI N H+S+
Sbjct: 5 MFGSGHWGGSFPYASIPKESQFVFDAKASPLQLQLFGSAAVPAVGSTGYYNYIANNHLSA 64
Query: 56 MIQPNKRSREMEDISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNS 115
M Q + ++ K+ LQ+SLNY ++ D A I NP+A+STGLRLSY+++E ++
Sbjct: 65 MNQERNTNNDVGH-EKQLNLQMSLNYFPVEN-LDRLARIGNPSAVSTGLRLSYENNE-HT 121
Query: 116 SVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASL 175
S+TS SG+M++ P I+ S D + ELD++ +E + Y LQ EQL + ++D+KQ+ M
Sbjct: 122 SITSGSGNMSSLP-IMASFVDEVMAELDKENKEFNCYFGLQVEQLVKCMKDVKQRQMVEF 180
Query: 176 LTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNN 235
L S+E+G+ KKL+EKE E+E MNRK++EL E+I+QVA+E Q+W A +N+SV N++++
Sbjct: 181 LASLERGVGKKLKEKELEVEAMNRKSKELNEQIRQVALEVQSWQSVALHNQSVANSMKSK 240
Query: 236 LQQAISHGVEQGKEGFGDSEVDDAASYIDPNNFLSIPGAPMKSIHPRYQGMEN---LSCR 292
L Q ++H +EG GDSEVD+ AS N ++PG +S M + +CR
Sbjct: 241 LMQMVAHSSNLTREGSGDSEVDNTAS---SQNVNAVPGVFFQSGLLGINSMADGGLGACR 297
Query: 293 ACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYLS 338
C+ K+ ++L++PCRHL LC DC+ +VCPVC+ K+ SVE+ +S
Sbjct: 298 LCRMKEAAVLVMPCRHLCLCADCEKNADVCPVCRFPKSCSVEINMS 343
>ref|XP_463998.1| putative S-ribonuclease binding protein SBP1 [Oryza sativa
(japonica cultivar-group)] gi|51963846|ref|XP_506706.1|
PREDICTED OJ1007_D04.4-2 gene product [Oryza sativa
(japonica cultivar-group)] gi|41052556|dbj|BAD07738.1|
putative S-ribonuclease binding protein SBP1 [Oryza
sativa (japonica cultivar-group)]
Length = 279
Score = 219 bits (558), Expect = 9e-56
Identities = 119/271 (43%), Positives = 183/271 (66%), Gaps = 9/271 (3%)
Query: 71 KKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNSSVTSASGSMTAPPSI 130
K+ LQ+SLNY ++ D A I NP+A+STGLRLSY+++E ++S+TS SG+M++ P I
Sbjct: 15 KQLNLQMSLNYFPVEN-LDRLARIGNPSAVSTGLRLSYENNE-HTSITSGSGNMSSLP-I 71
Query: 131 ILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREK 190
+ S D + ELD++ +E + Y LQ EQL + ++D+KQ+ M L S+E+G+ KKL+EK
Sbjct: 72 MASFVDEVMAELDKENKEFNCYFGLQVEQLVKCMKDVKQRQMVEFLASLERGVGKKLKEK 131
Query: 191 EEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNNLQQAISHGVEQGKEG 250
E E+E MNRK++EL E+I+QVA+E Q+W A +N+SV N++++ L Q ++H +EG
Sbjct: 132 ELEVEAMNRKSKELNEQIRQVALEVQSWQSVALHNQSVANSMKSKLMQMVAHSSNLTREG 191
Query: 251 FGDSEVDDAASYIDPNNFLSIPGAPMKSIHPRYQGMEN---LSCRACKAKDVSMLLIPCR 307
GDSEVD+ AS N ++PG +S M + +CR C+ K+ ++L++PCR
Sbjct: 192 SGDSEVDNTAS---SQNVNAVPGVFFQSGLLGINSMADGGLGACRLCRMKEAAVLVMPCR 248
Query: 308 HLSLCKDCDGFINVCPVCQMIKTASVEVYLS 338
HL LC DC+ +VCPVC+ K+ SVE+ +S
Sbjct: 249 HLCLCADCEKNADVCPVCRFPKSCSVEINMS 279
>ref|NP_912418.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|29893607|gb|AAP06861.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 342
Score = 188 bits (478), Expect = 2e-46
Identities = 95/242 (39%), Positives = 150/242 (61%), Gaps = 7/242 (2%)
Query: 98 NALSTGLRLSYDDDERNSSVTSASGSMTAPPSIIL--SLGDNIRTELDRQQEELDHYIKL 155
+A+STGL LS +D + +G+ + ++L L D+I E+ R ++D +IK
Sbjct: 106 SAVSTGLALSLEDRRHGGGSGAGAGNSSGDSPLLLLPMLDDDISREVQRLDADMDRFIKA 165
Query: 156 QKEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEA 215
Q E+L + + + Q L S+E I++K+R+KE E+EN+N++N EL ++IKQ+AVE
Sbjct: 166 QSERLRQSILEKVQAKQFEALASVEDKILRKIRDKEAEVENINKRNSELEDQIKQLAVEV 225
Query: 216 QNWHYRAKYNESVVNALRNNLQQAISHGVEQGKEGFGDSEVDDAASYIDPNNFLSIPGAP 275
W RAKYNES++NAL+ NL+Q +H + KEG GDSEVDD AS + ++ P
Sbjct: 226 GAWQQRAKYNESMINALKYNLEQVCAHQSKDFKEGCGDSEVDDTASCCN-GGAANLQLMP 284
Query: 276 MKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEV 335
++ H + + +CR CK+ + MLL+PCRHL LCK+C+ ++ CP+CQ K +E+
Sbjct: 285 KENRHSK----DLTACRVCKSSEACMLLLPCRHLCLCKECESKLSFCPLCQSSKILGMEI 340
Query: 336 YL 337
Y+
Sbjct: 341 YM 342
>gb|AAF28357.2| S-ribonuclease binding protein SBP1 [Petunia x hybrida]
Length = 332
Score = 181 bits (459), Expect = 3e-44
Identities = 102/285 (35%), Positives = 160/285 (55%), Gaps = 35/285 (12%)
Query: 57 IQPNKRSREMEDISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNSS 116
++P ++ + +D + QIS S P ++STGL LS D+ SS
Sbjct: 79 LEPKRKRPKEQDFLENNNSQIS------------SIDFLQPRSVSTGLGLSLDNGRLASS 126
Query: 117 VTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLL 176
SA + +GD+I EL RQ E+D YIK+Q ++L + + + Q + +
Sbjct: 127 GDSAFLGL---------VGDDIERELQRQDAEIDRYIKVQGDRLRQAILEKVQANQLQTV 177
Query: 177 TSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNNL 236
T +E+ +++KLREKE E+E++N+KN EL R +Q+A+EA W RAKYNE+++N L+ NL
Sbjct: 178 TYVEEKVIQKLREKETEVEDINKKNMELELRTEQLALEANAWQQRAKYNENLINTLKVNL 237
Query: 237 QQAISHGVEQGKEGFGDSEVDDAASYIDPN----NFLSIPGAPMKSIHPRYQGMENLSCR 292
+ + KEG GDSEVDD AS + + L MK E ++C+
Sbjct: 238 EHVYAQS-RDSKEGCGDSEVDDTASCCNGRATDLHLLCRDSNEMK---------ELMTCK 287
Query: 293 ACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYL 337
C+ +VSMLL+PC+HL LCK+C+ +++CP+CQ K +E+Y+
Sbjct: 288 VCRVNEVSMLLLPCKHLCLCKECESKLSLCPLCQSTKYIGMEIYM 332
>gb|AAR92230.1| S-RNase-binding protein [Solanum chacoense]
Length = 342
Score = 177 bits (450), Expect = 3e-43
Identities = 101/285 (35%), Positives = 159/285 (55%), Gaps = 35/285 (12%)
Query: 57 IQPNKRSREMEDISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNSS 116
++P K+ + +D + QIS S + ++STGL LS D+ SS
Sbjct: 89 LEPKKKRPKEQDFMENNNSQIS------------SVDLLQRRSVSTGLGLSLDNGRLASS 136
Query: 117 VTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLL 176
SA + +GD+I EL RQ E+D YIK+Q ++L + V + Q + +
Sbjct: 137 CDSAFLGL---------VGDDIERELQRQDAEIDRYIKVQGDRLRQAVLEKVQANQIQAI 187
Query: 177 TSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNNL 236
T +E+ +++KLRE++ E++++N+KN EL R++Q+ +EA W RAKYNE+++N L+ NL
Sbjct: 188 TYVEEKVLQKLRERDTEVDDINKKNMELELRMEQLDLEANAWQQRAKYNENLINTLKVNL 247
Query: 237 QQAISHGVEQGKEGFGDSEVDDAASYIDPN----NFLSIPGAPMKSIHPRYQGMENLSCR 292
Q + KEG GDSEVDD AS + + L MK E ++CR
Sbjct: 248 QHVYAQS-RDSKEGCGDSEVDDTASCCNGRATDLHLLCRDSKEMK---------ELMTCR 297
Query: 293 ACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYL 337
C+ +V ML +PC+HL LCK+C+ +++CP+CQ IK +EVY+
Sbjct: 298 VCRTNEVGMLWLPCKHLGLCKECESKLSLCPLCQSIKYIGMEVYM 342
>gb|AAS76633.1| S-RNase binding protein 1 [Solanum chacoense]
Length = 337
Score = 177 bits (448), Expect = 5e-43
Identities = 101/285 (35%), Positives = 159/285 (55%), Gaps = 35/285 (12%)
Query: 57 IQPNKRSREMEDISKKQRLQISLNYNVCQDDADWSASIPNPNALSTGLRLSYDDDERNSS 116
++P K+ + +D + QIS S + ++STGL LS D+ SS
Sbjct: 84 LEPKKKRPKEQDFMENNNSQIS------------SVDLFQRRSVSTGLGLSLDNGRLASS 131
Query: 117 VTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLL 176
SA + +GD+I EL RQ E+D YIK+Q ++L + V + Q + +
Sbjct: 132 CDSAFLGL---------VGDDIERELQRQDAEIDRYIKVQGDRLRQAVLEKVQANQIQAI 182
Query: 177 TSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVNALRNNL 236
T +E+ +++KLRE++ E++++N+KN EL R++Q+ +EA W RAKYNE+++N L+ NL
Sbjct: 183 TYVEEKVLQKLRERDTEVDDINKKNMELELRMEQLDLEANAWQQRAKYNENLINTLKVNL 242
Query: 237 QQAISHGVEQGKEGFGDSEVDDAASYIDPN----NFLSIPGAPMKSIHPRYQGMENLSCR 292
Q + KEG GDSEVDD AS + + L MK E ++CR
Sbjct: 243 QHVYAQS-RDSKEGCGDSEVDDTASCCNGRATDLHLLCRDSKEMK---------ELMTCR 292
Query: 293 ACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYL 337
C+ +V MLL+PC+HL LCK+C+ +++CP+CQ K +EVY+
Sbjct: 293 VCRTNEVCMLLLPCKHLCLCKECESKLSLCPLCQSTKYIGMEVYM 337
>gb|AAK15576.1| putative S-ribonuclease binding protein SBP1 [Arabidopsis thaliana]
gi|11993871|gb|AAG42919.1| putative S-ribonuclease
binding protein SBP1 [Arabidopsis thaliana]
gi|62320820|dbj|BAD93762.1| S-ribonuclease binding like
protein [Arabidopsis thaliana]
gi|20147309|gb|AAM10368.1| F2G19.22/F2G19.22
[Arabidopsis thaliana] gi|17979239|gb|AAL49936.1|
F2G19.22/F2G19.22 [Arabidopsis thaliana]
gi|15220096|ref|NP_175141.1| expressed protein
[Arabidopsis thaliana] gi|12321008|gb|AAG50626.1|
S-ribonuclease binding protein SBP1, putative
[Arabidopsis thaliana] gi|11692936|gb|AAG40071.1|
F2G19.2 [Arabidopsis thaliana] gi|25405174|pir||B96511
probable S-ribonuclease binding protein SBP1 [imported]
- Arabidopsis thaliana
Length = 325
Score = 164 bits (414), Expect = 5e-39
Identities = 89/239 (37%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 99 ALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQKE 158
++STGL LS D N+ V S+ GS +++ +GD+I EL RQ ++D ++K+Q +
Sbjct: 109 SVSTGLGLSLD----NARVASSDGS-----ALLSLVGDDIDRELQRQDADIDRFLKIQGD 159
Query: 159 QLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNW 218
QL + D ++ ++ +E+ +V+KLREK+EE+E +NRKN+EL R++Q+ +EA+ W
Sbjct: 160 QLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTMEAEAW 219
Query: 219 HYRAKYNESVVNALRNNLQQAISHGVEQGKEGFGDSEVDDAASYIDPNNFLSIPGAPMKS 278
RAKYNE+++ AL NL +A EG GDSEVDD AS + +
Sbjct: 220 QQRAKYNENMIAALNYNLDRAQGR-PRDSIEGCGDSEVDDTASCFNGRD----------- 267
Query: 279 IHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEVYL 337
+ + CR C +++ MLL+PC H+ LCK+C+ ++ CP+CQ K +EVY+
Sbjct: 268 -NSNNNTKTMMMCRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSSKFLGMEVYM 325
>emb|CAB10548.1| hypothetical protein [Arabidopsis thaliana]
gi|7268520|emb|CAB78771.1| hypothetical protein
[Arabidopsis thaliana] gi|7485189|pir||G71446
hypothetical protein - Arabidopsis thaliana
Length = 297
Score = 145 bits (367), Expect = 1e-33
Identities = 85/248 (34%), Positives = 136/248 (54%), Gaps = 38/248 (15%)
Query: 97 PNALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQ 156
PN +STGLRL +D + S SL ++ ++ RQ++ELD +I+ Q
Sbjct: 77 PNVVSTGLRLFHDQSQNQQQFFS-------------SLPGDVTGKIKRQRDELDRFIQTQ 123
Query: 157 KEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQ 216
E+L R + D +++ LL + E+ + +KLR+KE E+E R++ EL R+ + EA+
Sbjct: 124 GEELRRTLADNRERRYVELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEAR 183
Query: 217 NWHYRAKYNESVVNALRNNLQQAISHGVEQ-------GKEGFGDSEVDDAAS-YIDPNNF 268
NW RA E+ V++L +LQQAI++ ++ G++G E +DA S Y+DP
Sbjct: 184 NWQLRAATREAEVSSLHAHLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPER- 242
Query: 269 LSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCD-GFINVCPVCQM 327
++ I P SCR C+ K +++ +PC+HL LC CD G + VCP+C
Sbjct: 243 -------IELIGP--------SCRICRRKSATVMALPCQHLILCNGCDVGAVRVCPICLA 287
Query: 328 IKTASVEV 335
+KT+ VEV
Sbjct: 288 VKTSGVEV 295
>gb|AAM91645.1| unknown protein [Arabidopsis thaliana] gi|30684141|ref|NP_193503.2|
expressed protein [Arabidopsis thaliana]
Length = 314
Score = 145 bits (367), Expect = 1e-33
Identities = 85/248 (34%), Positives = 136/248 (54%), Gaps = 38/248 (15%)
Query: 97 PNALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKLQ 156
PN +STGLRL +D + S SL ++ ++ RQ++ELD +I+ Q
Sbjct: 94 PNVVSTGLRLFHDQSQNQQQFFS-------------SLPGDVTGKIKRQRDELDRFIQTQ 140
Query: 157 KEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQ 216
E+L R + D +++ LL + E+ + +KLR+KE E+E R++ EL R+ + EA+
Sbjct: 141 GEELRRTLADNRERRYVELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEAR 200
Query: 217 NWHYRAKYNESVVNALRNNLQQAISHGVEQ-------GKEGFGDSEVDDAAS-YIDPNNF 268
NW RA E+ V++L +LQQAI++ ++ G++G E +DA S Y+DP
Sbjct: 201 NWQLRAATREAEVSSLHAHLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPER- 259
Query: 269 LSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCD-GFINVCPVCQM 327
++ I P SCR C+ K +++ +PC+HL LC CD G + VCP+C
Sbjct: 260 -------IELIGP--------SCRICRRKSATVMALPCQHLILCNGCDVGAVRVCPICLA 304
Query: 328 IKTASVEV 335
+KT+ VEV
Sbjct: 305 VKTSGVEV 312
>gb|AAM14227.1| unknown protein [Arabidopsis thaliana] gi|17380822|gb|AAL36098.1|
unknown protein [Arabidopsis thaliana]
gi|9759447|dbj|BAB10244.1| unnamed protein product
[Arabidopsis thaliana] gi|15238000|ref|NP_199516.1|
expressed protein [Arabidopsis thaliana]
Length = 300
Score = 135 bits (340), Expect = 2e-30
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 37/253 (14%)
Query: 96 NPNALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKL 155
NPN +STGLRLS R S ++ P + ++ E+ Q +EL+ ++++
Sbjct: 75 NPNVVSTGLRLS-----REQSQNQEQRFLSFP------ITGDVAGEIKSQTDELNRFLQI 123
Query: 156 QKEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEA 215
Q EQL R + + +++ LL + E+ + ++LREKE EIE R++ EL R Q+ EA
Sbjct: 124 QGEQLKRMLAENSERNYRELLRTTEESVRRRLREKEAEIEKATRRHVELEARATQIETEA 183
Query: 216 QNWHYRAKYNESVVNALRNNLQQA--ISHG------VE-QGKEGFGDSEVDDAAS-YIDP 265
+ W RA E+ +L+ L QA ++HG VE Q G E +DA S Y+DP
Sbjct: 184 RAWQMRAAAREAEATSLQAQLHQAVVVAHGGGVITTVEPQSGSVDGVDEAEDAESAYVDP 243
Query: 266 NNFLSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVC 325
+ ++ I P CR C+ + ++L +PCRHL +C +CDG + +CP+C
Sbjct: 244 DR--------VEMIGP--------GCRICRRRSATVLALPCRHLVMCTECDGSVRICPLC 287
Query: 326 QMIKTASVEVYLS 338
K +SVEV+ S
Sbjct: 288 LSTKNSSVEVFYS 300
>gb|AAM63608.1| unknown [Arabidopsis thaliana] gi|18398566|ref|NP_564408.1|
expressed protein [Arabidopsis thaliana]
Length = 312
Score = 133 bits (334), Expect = 9e-30
Identities = 81/254 (31%), Positives = 130/254 (50%), Gaps = 47/254 (18%)
Query: 95 PNPNALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNI-RTELDRQQEELDHYI 153
P N + TGLRL +D+ I L +++ ++RQ EELD ++
Sbjct: 88 PPSNMVHTGLRLFSGEDQAQK---------------ISHLSEDVFAAHINRQSEELDEFL 132
Query: 154 KLQKEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAV 213
Q E+L R + + ++ H +LL ++E+ +V+KLREKE EIE R++ EL R Q+
Sbjct: 133 HAQAEELRRTLAEKRKMHYKALLGAVEESLVRKLREKEVEIERATRRHNELVARDSQLRA 192
Query: 214 EAQNWHYRAKYNESVVNALRNNLQQAI------------SHGVEQGKEGFGDSEVDDAAS 261
E Q W RAK +E +L++ LQQA+ S E+G S VDDA S
Sbjct: 193 EVQVWQERAKAHEDAAASLQSQLQQAVNQCAGGCVSAQDSRAAEEGLLCTTISGVDDAES 252
Query: 262 -YIDPNNFLSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDCDGFIN 320
Y+DP + ++ +C+AC+ ++ +++++PCRHLS+C CD
Sbjct: 253 VYVDP------------------ERVKRPNCKACREREATVVVLPCRHLSICPGCDRTAL 294
Query: 321 VCPVCQMIKTASVE 334
CP+C ++ +SVE
Sbjct: 295 ACPLCLTLRNSSVE 308
>ref|XP_467205.1| S-ribonuclease binding protein SBP1-like [Oryza sativa (japonica
cultivar-group)] gi|41052730|dbj|BAD07587.1|
S-ribonuclease binding protein SBP1-like [Oryza sativa
(japonica cultivar-group)]
Length = 342
Score = 131 bits (330), Expect = 3e-29
Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 44/323 (13%)
Query: 42 VDPVSYIGNEHISSMIQPNKRSRE------------MEDISKKQRLQISLNYNVCQDDAD 89
V P Y + S + + NKRSRE + ++ Q Q + N+ Q
Sbjct: 36 VSPEVYFPSGGASGINRRNKRSREAIAMAPPPAKEELVNLFTLQPQQSTSFVNMAQLHNR 95
Query: 90 WSASIPNPNA--LSTGLRLSYDDDERNSSVTSASGSMTA-----PPSIILSLGDNIRTEL 142
SAS A +STGLRL+ D+ ++ S + A P +S D + ++
Sbjct: 96 VSASPSRAPAALVSTGLRLALDEQQQQQQQQQESKRLKALCYSSSPMPFVSFSDELAGQM 155
Query: 143 DRQQEELDHYIKLQKEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNR 202
RQ EELD +IK Q EQL R + D ++H +LL + E+ ++LREK E E R+
Sbjct: 156 KRQDEELDRFIKEQGEQLRRAMADRVRRHNRALLVAAERSAARRLREKALEAEREARRGA 215
Query: 203 ELAERIKQVAVEAQNWHYRAKYNESVVNALRNNLQQAISHGVEQGKE---GFGDSEVDDA 259
EL ER+ ++ EA W +A ++ +L LQQA + G E G +
Sbjct: 216 ELEERLARLRSEAAAWQAKALSEQAAAVSLHAQLQQAAAAARASGDELRGGEAGPAESSS 275
Query: 260 ASYIDPNNFLSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSLCKDC--DG 317
++Y+D PR G + +C C+ + +++L+PCRHLSLC DC G
Sbjct: 276 SAYVD----------------PRRSGSDR-ACLTCRLRPATVVLLPCRHLSLCGDCFAAG 318
Query: 318 FINV---CPVCQMIKTASVEVYL 337
++V CPVC ++T VE L
Sbjct: 319 DVDVAMACPVCHCVRTGGVEAIL 341
>gb|AAF25971.1| F6N18.12 [Arabidopsis thaliana]
Length = 277
Score = 125 bits (314), Expect = 2e-27
Identities = 81/263 (30%), Positives = 130/263 (48%), Gaps = 56/263 (21%)
Query: 95 PNPNALSTGLRLSYDDDERNSSVTSASGSMTAPPSIILSLGDNI-RTELDRQQEELDHYI 153
P N + TGLRL +D+ I L +++ ++RQ EELD ++
Sbjct: 44 PPSNMVHTGLRLFSGEDQAQK---------------ISHLSEDVFAAHINRQSEELDEFL 88
Query: 154 KLQ---------KEQLSRGVRDMKQKHMASLLTSIEKGIVKKLREKEEEIENMNRKNREL 204
Q E+L R + + ++ H +LL ++E+ +V+KLREKE EIE R++ EL
Sbjct: 89 HAQVLISYETIWAEELRRTLAEKRKMHYKALLGAVEESLVRKLREKEVEIERATRRHNEL 148
Query: 205 AERIKQVAVEAQNWHYRAKYNESVVNALRNNLQQAI------------SHGVEQGKEGFG 252
R Q+ E Q W RAK +E +L++ LQQA+ S E+G
Sbjct: 149 VARDSQLRAEVQVWQERAKAHEDAAASLQSQLQQAVNQCAGGCVSAQDSRAAEEGLLCTT 208
Query: 253 DSEVDDAAS-YIDPNNFLSIPGAPMKSIHPRYQGMENLSCRACKAKDVSMLLIPCRHLSL 311
S VDDA S Y+DP + ++ +C+AC+ ++ +++++PCRHLS+
Sbjct: 209 ISGVDDAESVYVDP------------------ERVKRPNCKACREREATVVVLPCRHLSI 250
Query: 312 CKDCDGFINVCPVCQMIKTASVE 334
C CD CP+C ++ +SVE
Sbjct: 251 CPGCDRTALACPLCLTLRNSSVE 273
>gb|AAM65075.1| inhibitor of apoptosis-like protein [Arabidopsis thaliana]
Length = 358
Score = 122 bits (307), Expect = 1e-26
Identities = 77/243 (31%), Positives = 129/243 (52%), Gaps = 24/243 (9%)
Query: 114 NSSVTSASGSMTAPPSIILSLGDNIRTELDRQQEELDHYIKL---QKEQLSRGVRDMKQK 170
+S V +A+ + T P L +I + +++QQ E+D ++ L Q E++ + + +++
Sbjct: 121 SSCVNAATTTTTTTPFSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKR 180
Query: 171 HMASLLTSIEKGIVKKLREKEEEIENMNRKNRELAERIKQVAVEAQNWHYRAKYNESVVN 230
+++ +IE+G+VK+LR KEEE E + + N L ER+K +++E Q W A+ NE+ N
Sbjct: 181 QARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTNEATAN 240
Query: 231 ALRNNLQQAISHGVEQGKEGFG----DSEVDDAASYIDPNNFLSIPGAPMKSIHPRYQGM 286
LR NL+ ++ V+ G G +E DDA S S G +++ R G+
Sbjct: 241 HLRTNLEHVLAQ-VKDVSRGAGLEKNMNEEDDAESCCGS----SCGGGGEETVRRRV-GL 294
Query: 287 ENLS-----------CRACKAKDVSMLLIPCRHLSLCKDCDGFINVCPVCQMIKTASVEV 335
E + CR C ++ +LL+PCRHL LC C ++ CP+C K ASV V
Sbjct: 295 EREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHV 354
Query: 336 YLS 338
+S
Sbjct: 355 NMS 357
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,057,502
Number of Sequences: 2540612
Number of extensions: 22929779
Number of successful extensions: 104405
Number of sequences better than 10.0: 1513
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 1106
Number of HSP's that attempted gapping in prelim test: 102460
Number of HSP's gapped (non-prelim): 2734
length of query: 338
length of database: 863,360,394
effective HSP length: 128
effective length of query: 210
effective length of database: 538,162,058
effective search space: 113014032180
effective search space used: 113014032180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)
Lotus: description of TM0008.8