BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.6
(262 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA73389.1| hypothetical protein FG03921.1 [Gibberella zeae P... 51 3e-05
gb|AAC95598.1| orf 73 [Ateline herpesvirus 3] gi|9631264|ref|NP_... 50 6e-05
gb|AAC55139.1| MC011L [Molluscum contagiosum virus subtype 1] gi... 49 1e-04
gb|AAQ94686.1| PA0724 [Pseudomonas phage Pf1] 47 5e-04
ref|ZP_00138785.2| hypothetical protein Paer03002920 [Pseudomona... 47 5e-04
sp|Q921F4|HNRLL_MOUSE Heterogeneous nuclear ribonucleoprotein L-... 46 0.001
ref|NP_659051.2| heterogeneous nuclear ribonucleoprotein L-like ... 46 0.001
dbj|BAC28858.1| unnamed protein product [Mus musculus] 46 0.001
dbj|BAB28521.1| unnamed protein product [Mus musculus] 46 0.001
ref|XP_547317.1| PREDICTED: similar to Formin-binding protein 3 ... 45 0.002
ref|YP_068017.1| LMP1 [Cercopithecine herpesvirus 15] gi|1802554... 45 0.002
emb|CAG82021.1| unnamed protein product [Yarrowia lipolytica CLI... 44 0.006
gb|AAY28519.1| biofilm-associated protein [Staphylococcus epider... 43 0.008
ref|YP_177781.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculo... 43 0.010
ref|NP_854752.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2... 43 0.010
ref|YP_034724.1| surface protein, pentapeptide repeat domain [Ba... 43 0.010
ref|ZP_00380257.1| COG0744: Membrane carboxypeptidase (penicilli... 43 0.010
gb|AAK45353.1| PE_PGRS family protein [Mycobacterium tuberculosi... 43 0.010
ref|XP_640706.1| hypothetical protein DDB0205614 [Dictyostelium ... 43 0.010
gb|AAD28806.1| adsorption protein [Xanthomonas phage phi-Xv] 43 0.010
>gb|EAA73389.1| hypothetical protein FG03921.1 [Gibberella zeae PH-1]
gi|46116158|ref|XP_384097.1| hypothetical protein
FG03921.1 [Gibberella zeae PH-1]
Length = 623
Score = 51.2 bits (121), Expect = 3e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGDSG G +G GSG GDKG GG + SD+GS SG+
Sbjct: 546 GGDSGSGSGSGSGSGSGDKGSGGGDGGSDSGSGSGS 581
Score = 35.4 bits (80), Expect = 1.6
Identities = 21/44 (47%), Positives = 24/44 (53%), Gaps = 7/44 (15%)
Query: 194 VVGGDSGDGGNNGGGSGHGDKGDGGDEDDS------DNGSDSGA 231
V D GG +G GSG GDKG G DE S D+GS SG+
Sbjct: 513 VTRDDKSGGGGSGSGSGSGDKG-GDDESGSGGDSGGDSGSGSGS 555
>gb|AAC95598.1| orf 73 [Ateline herpesvirus 3] gi|9631264|ref|NP_048045.1| orf 73
[Ateline herpesvirus 3] gi|11278193|pir||T42987
hypothetical protein 73 - ateline herpesvirus 3 (strain
73)
Length = 447
Score = 50.1 bits (118), Expect = 6e-05
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G D+GDGGD +D D+G D G
Sbjct: 189 GGDGGDGGDGGDGEDGDDEGDGGDGEDEDDGGDGG 223
Score = 48.5 bits (114), Expect = 2e-04
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G GD GDGGD D + G D G
Sbjct: 114 GGDGGDGGDGGDGEDGGDGGDGGDGGDGEEGGDGG 148
Score = 47.0 bits (110), Expect = 5e-04
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDG + G G GD GDGGD +D ++G D G
Sbjct: 219 GGDGGDGEDGGDGGDGGDGGDGGDGEDGEDGGDGG 253
Score = 47.0 bits (110), Expect = 5e-04
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GD G+ G G GD GDG D DD D+G D G
Sbjct: 156 GGDEGDEGDGGDGGDGGDGGDGEDGDDEDDGGDGG 190
Score = 45.4 bits (106), Expect = 0.002
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GGD GDGG+ G GD GDG DEDD +G D
Sbjct: 192 GGDGGDGGDGEDGDDEGDGGDGEDEDDGGDGGD 224
Score = 45.4 bits (106), Expect = 0.002
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GD G+ G G GD GDGGD +D D+ D G
Sbjct: 153 GGDGGDEGDEGDGGDGGDGGDGGDGEDGDDEDDGG 187
Score = 45.1 bits (105), Expect = 0.002
Identities = 19/34 (55%), Positives = 21/34 (60%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GDGG+ G G GD DG DEDD +G D G
Sbjct: 160 GDEGDGGDGGDGGDGGDGEDGDDEDDGGDGGDGG 193
Score = 44.7 bits (104), Expect = 0.003
Identities = 19/35 (54%), Positives = 21/35 (59%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G D GDGGD D +G D G
Sbjct: 231 GGDGGDGGDGGDGEDGEDGGDGGDGGDGGDGGDGG 265
Score = 43.5 bits (101), Expect = 0.006
Identities = 18/35 (51%), Positives = 21/35 (59%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G D+ DGGD D +G D G
Sbjct: 165 GGDGGDGGDGGDGEDGDDEDDGGDGGDGGDGGDGG 199
Score = 42.4 bits (98), Expect = 0.013
Identities = 18/34 (52%), Positives = 21/34 (60%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GGD GDGG+ G GD GDGGD D +G +S
Sbjct: 234 GGDGGDGGDGEDGEDGGDGGDGGDGGDGGDGGES 267
Score = 42.4 bits (98), Expect = 0.013
Identities = 18/35 (51%), Positives = 20/35 (56%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDG G G + GDGGDE D +G D G
Sbjct: 135 GGDGGDGEEGGDGGDWEEGGDGGDEGDEGDGGDGG 169
Score = 42.0 bits (97), Expect = 0.017
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GGD GDGG+ G GD GDGGD ++ +G D
Sbjct: 117 GGDGGDGGDGEDGGDGGDGGDGGDGEEGGDGGD 149
Score = 41.6 bits (96), Expect = 0.023
Identities = 18/35 (51%), Positives = 20/35 (56%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G D DGGD D +G D G
Sbjct: 228 GGDGGDGGDGGDGGDGEDGEDGGDGGDGGDGGDGG 262
Score = 40.8 bits (94), Expect = 0.039
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GGD GD G G GD+GDGGD D +G D
Sbjct: 144 GGDGGDWEEGGDGGDEGDEGDGGDGGDGGDGGD 176
Score = 40.8 bits (94), Expect = 0.039
Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 9/44 (20%)
Query: 196 GGDSGDGGNNG----GGSGH-----GDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G GG G GD GD GDE D +G D G
Sbjct: 129 GGDGGDGGDGGDGEEGGDGGDWEEGGDGGDEGDEGDGGDGGDGG 172
Score = 40.8 bits (94), Expect = 0.039
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 9/44 (20%)
Query: 196 GGDSGDGGNN---------GGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ G G GD GDGGD +D D+ D G
Sbjct: 168 GGDGGDGGDGEDGDDEDDGGDGGDGGDGGDGGDGEDGDDEGDGG 211
Score = 40.4 bits (93), Expect = 0.050
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 196 GGDSGDG------GNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD GDG G+ G G D GDGGD +D +G D G
Sbjct: 195 GGDGGDGEDGDDEGDGGDGEDEDDGGDGGDGEDGGDGGDGG 235
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D DGG+ G G GD GDGGD D +G D
Sbjct: 213 GEDEDDGGDGGDGEDGGDGGDGGDGGDGGDGED 245
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D DGG+ G G GD GDG D DD +G D
Sbjct: 180 GDDEDDGGDGGDGGDGGDGGDGEDGDDEGDGGD 212
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/35 (48%), Positives = 20/35 (56%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD DGG+ G G GD +GGD D + G D G
Sbjct: 123 GGDGEDGGDGGDGGDGGDGEEGGDGGDWEEGGDGG 157
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/35 (48%), Positives = 20/35 (56%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G D DG + G G GD GDGGD +D +G D G
Sbjct: 102 GRDGRDGRDGGDGGDGGDGGDGGDGEDGGDGGDGG 136
Score = 39.3 bits (90), Expect = 0.11
Identities = 16/35 (45%), Positives = 21/35 (59%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G D GDGG+ G G + GDGGD ++ +G D G
Sbjct: 126 GEDGGDGGDGGDGGDGEEGGDGGDWEEGGDGGDEG 160
Score = 38.5 bits (88), Expect = 0.19
Identities = 17/35 (48%), Positives = 19/35 (53%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G D DGG+ G G GD GDG D D +G D G
Sbjct: 105 GRDGRDGGDGGDGGDGGDGGDGEDGGDGGDGGDGG 139
Score = 38.5 bits (88), Expect = 0.19
Identities = 18/35 (51%), Positives = 21/35 (59%), Gaps = 3/35 (8%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G D GDGG+ G G GD GDG D +D +G D G
Sbjct: 225 GEDGGDGGDGGDG---GDGGDGEDGEDGGDGGDGG 256
Score = 38.1 bits (87), Expect = 0.25
Identities = 17/35 (48%), Positives = 19/35 (53%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD DG + G GD GDGGD D +G D G
Sbjct: 96 GGDGRDGRDGRDGRDGGDGGDGGDGGDGGDGEDGG 130
Score = 36.6 bits (83), Expect = 0.73
Identities = 20/47 (42%), Positives = 24/47 (50%), Gaps = 12/47 (25%)
Query: 196 GGDSGDGGN-----NGGGSGH-------GDKGDGGDEDDSDNGSDSG 230
G D GDGG+ +GG G GD GDGGD D ++G D G
Sbjct: 204 GDDEGDGGDGEDEDDGGDGGDGEDGGDGGDGGDGGDGGDGEDGEDGG 250
Score = 36.6 bits (83), Expect = 0.73
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GDG + G GD DGGD D +G D G
Sbjct: 208 GDGGDGEDEDDGGDGGDGEDGGDGGDGGDGGDGG 241
Score = 35.8 bits (81), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GGD DG + G G GD GDGGD +S+ ++
Sbjct: 240 GGDGEDGEDGGDGGDGGDGGDGGDGGESEEEAE 272
Score = 33.9 bits (76), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDN 225
GGD GDGG+ G G G+ + +E++++N
Sbjct: 249 GGDGGDGGDGGDGGDGGESEEEAEENEAEN 278
>gb|AAC55139.1| MC011L [Molluscum contagiosum virus subtype 1]
gi|7515103|pir||T30613 hypothetical protein 11L -
Molluscum contagiosum virus 1
gi|9628943|ref|NP_043962.1| MC011L [Molluscum
contagiosum virus]
Length = 297
Score = 49.3 bits (116), Expect = 1e-04
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D GDGGN G G GD GD GD+DD D+G D
Sbjct: 184 GDDGGDGGNGGNGGDGGDGGDDGDDDDDDDGDD 216
>gb|AAQ94686.1| PA0724 [Pseudomonas phage Pf1]
Length = 439
Score = 47.0 bits (110), Expect = 5e-04
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GGD GDGGN GGG G GD G G D D G+
Sbjct: 258 GGDGGDGGNTGGGDGGGDNGGGNDNGGGDGGT 289
Score = 37.0 bits (84), Expect = 0.56
Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 2/37 (5%)
Query: 196 GGDSGDGGNNGGGSG--HGDKGDGGDEDDSDNGSDSG 230
GGD+G G +NGGG G G G GG+ + +GS G
Sbjct: 273 GGDNGGGNDNGGGDGGTGGSDGSGGNGEGGGDGSGGG 309
Score = 33.1 bits (74), Expect = 8.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 196 GGDSGDGGNNG-GGSGHGDKGDGGDEDDSDNGSDSG 230
GGD G GG++G GG+G G GDG D G G
Sbjct: 284 GGDGGTGGSDGSGGNGEGG-GDGSGGGDGSGGGTGG 318
>ref|ZP_00138785.2| hypothetical protein Paer03002920 [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 285
Score = 47.0 bits (110), Expect = 5e-04
Identities = 19/32 (59%), Positives = 20/32 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GGD GDGGN GGG G GD G G D D G+
Sbjct: 104 GGDGGDGGNTGGGDGGGDNGGGNDNGGGDGGT 135
Score = 37.0 bits (84), Expect = 0.56
Identities = 17/37 (45%), Positives = 22/37 (58%), Gaps = 2/37 (5%)
Query: 196 GGDSGDGGNNGGGSG--HGDKGDGGDEDDSDNGSDSG 230
GGD+G G +NGGG G G G GG+ + +GS G
Sbjct: 119 GGDNGGGNDNGGGDGGTGGSDGSGGNGEGGGDGSGGG 155
Score = 33.1 bits (74), Expect = 8.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 196 GGDSGDGGNNG-GGSGHGDKGDGGDEDDSDNGSDSG 230
GGD G GG++G GG+G G GDG D G G
Sbjct: 130 GGDGGTGGSDGSGGNGEGG-GDGSGGGDGSGGGTGG 164
>sp|Q921F4|HNRLL_MOUSE Heterogeneous nuclear ribonucleoprotein L-like
Length = 591
Score = 46.2 bits (108), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD GDG GG G G++G+GG+E D +G + G+
Sbjct: 59 GGDGGDGDGGSGGGGDGEEGEGGEEGDEGDGDEGGS 94
Score = 41.2 bits (95), Expect = 0.030
Identities = 20/39 (51%), Positives = 25/39 (63%), Gaps = 5/39 (12%)
Query: 196 GGDSGDGGNNGGGSGH----GDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ GGG G G++GD GD D+ +G D G
Sbjct: 62 GGD-GDGGSGGGGDGEEGEGGEEGDEGDGDEGGSGGDEG 99
Score = 33.1 bits (74), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D G GG G G G GGD ++ + G +
Sbjct: 52 GSDSDSGGGDGGDGDGGSGGGGDGEEGEGGEE 83
>ref|NP_659051.2| heterogeneous nuclear ribonucleoprotein L-like [Mus musculus]
gi|37514843|gb|AAH12849.2| Heterogeneous nuclear
ribonucleoprotein L-like [Mus musculus]
Length = 594
Score = 46.2 bits (108), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD GDG GG G G++G+GG+E D +G + G+
Sbjct: 59 GGDGGDGDGGSGGGGDGEEGEGGEEGDEGDGDEGGS 94
Score = 41.2 bits (95), Expect = 0.030
Identities = 20/39 (51%), Positives = 25/39 (63%), Gaps = 5/39 (12%)
Query: 196 GGDSGDGGNNGGGSGH----GDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ GGG G G++GD GD D+ +G D G
Sbjct: 62 GGD-GDGGSGGGGDGEEGEGGEEGDEGDGDEGGSGGDEG 99
Score = 33.1 bits (74), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D G GG G G G GGD ++ + G +
Sbjct: 52 GSDSDSGGGDGGDGDGGSGGGGDGEEGEGGEE 83
>dbj|BAC28858.1| unnamed protein product [Mus musculus]
Length = 326
Score = 46.2 bits (108), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD GDG GG G G++G+GG+E D +G + G+
Sbjct: 59 GGDGGDGDGGSGGGGDGEEGEGGEEGDEGDGDEGGS 94
Score = 41.2 bits (95), Expect = 0.030
Identities = 20/39 (51%), Positives = 25/39 (63%), Gaps = 5/39 (12%)
Query: 196 GGDSGDGGNNGGGSGH----GDKGDGGDEDDSDNGSDSG 230
GGD GDGG+ GGG G G++GD GD D+ +G D G
Sbjct: 62 GGD-GDGGSGGGGDGEEGEGGEEGDEGDGDEGGSGGDEG 99
Score = 33.1 bits (74), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D G GG G G G GGD ++ + G +
Sbjct: 52 GSDSDSGGGDGGDGDGGSGGGGDGEEGEGGEE 83
>dbj|BAB28521.1| unnamed protein product [Mus musculus]
Length = 588
Score = 46.2 bits (108), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GGD GDG GG G G++G+GG+E D +G + G+
Sbjct: 56 GGDGGDGDGGSGGGGDGEEGEGGEEGDEGDGDEGGS 91
Score = 34.3 bits (77), Expect = 3.6
Identities = 22/47 (46%), Positives = 24/47 (50%), Gaps = 14/47 (29%)
Query: 196 GGDSGDGGNNGGGSGH-------GDKGD------GGDEDDSDNGSDS 229
GGD GDGG+ GGG G GD+GD GGDE S G S
Sbjct: 59 GGD-GDGGSGGGGDGEEGEGGEEGDEGDGDEGGSGGDESGSGGGPRS 104
>ref|XP_547317.1| PREDICTED: similar to Formin-binding protein 3 (Formin-binding
protein 11) (FBP 11) [Canis familiaris]
Length = 673
Score = 45.1 bits (105), Expect = 0.002
Identities = 20/36 (55%), Positives = 23/36 (63%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
GDSGD G++GG GD GD GD DS + DSG L
Sbjct: 83 GDSGDFGDSGGSGDSGDSGDFGDSGDSGDSGDSGTL 118
Score = 42.7 bits (99), Expect = 0.010
Identities = 19/36 (52%), Positives = 22/36 (60%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
GDSGD G++G GD GD GD DS + DSG L
Sbjct: 440 GDSGDFGDSGDSGDSGDSGDSGDSGDSGHSGDSGDL 475
Score = 41.6 bits (96), Expect = 0.023
Identities = 18/35 (51%), Positives = 21/35 (59%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
D GD G++GG GD GD GD DS + DSG L
Sbjct: 320 DFGDSGDSGGSGDSGDSGDFGDSGDSGDSGDSGTL 354
Score = 41.2 bits (95), Expect = 0.030
Identities = 18/34 (52%), Positives = 22/34 (63%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD+GD G++GG G GD GD GD D + DSG
Sbjct: 205 GDAGDFGDSGGSGGSGDSGDIGDSGDFGDFGDSG 238
Score = 40.8 bits (94), Expect = 0.039
Identities = 18/34 (52%), Positives = 20/34 (57%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD G+ G G GD GD GD DS + DSG
Sbjct: 80 GDIGDSGDFGDSGGSGDSGDSGDFGDSGDSGDSG 113
Score = 40.4 bits (93), Expect = 0.050
Identities = 18/34 (52%), Positives = 20/34 (57%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G +G GD GD GD DS + DSG
Sbjct: 244 GDSGDSGGSGDSGDFGDSGDFGDSGDSGDFGDSG 277
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
DSGD G++G GD GD GD DS + DSG
Sbjct: 435 DSGDSGDSGDFGDSGDSGDSGDSGDSGDSGDSG 467
Score = 38.9 bits (89), Expect = 0.15
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD D G++G G GD GD GD DS + DSG
Sbjct: 316 GDVADFGDSGDSGGSGDSGDSGDFGDSGDSGDSG 349
Score = 38.9 bits (89), Expect = 0.15
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G+ G GD GD GD DS + SG
Sbjct: 437 GDSGDSGDFGDSGDSGDSGDSGDSGDSGDSGHSG 470
Score = 38.5 bits (88), Expect = 0.19
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD GD G DS + DSG
Sbjct: 446 GDSGDSGDSGDSGDSGDSGDSGHSGDSGDLRDSG 479
Score = 38.1 bits (87), Expect = 0.25
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
D GD G +GG GD GD GD DS DSG
Sbjct: 66 DFGDSGGSGGSGDSGDIGDSGDFGDSGGSGDSG 98
Score = 37.7 bits (86), Expect = 0.33
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD G GD D + DSG
Sbjct: 449 GDSGDSGDSGDSGDSGDSGHSGDSGDLRDSGDSG 482
Score = 37.7 bits (86), Expect = 0.33
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD D G++GG G GD GD GD D + DSG
Sbjct: 283 GDVADFGDSGGSGGSGDSGDIGDSGDFGDFGDSG 316
Score = 37.4 bits (85), Expect = 0.43
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G+ G GD GD GD DS SG
Sbjct: 187 GDSGDSGDFGDSGDFGDSGDAGDFGDSGGSGGSG 220
Score = 37.0 bits (84), Expect = 0.56
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD GD GD D + DSG
Sbjct: 259 GDSGDFGDSGDSGDFGDSGDFGDSGDVADFGDSG 292
Score = 36.6 bits (83), Expect = 0.73
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GDSGD G++G G GD GD DS + DS
Sbjct: 452 GDSGDSGDSGDSGDSGHSGDSGDLRDSGDSGDS 484
Score = 36.6 bits (83), Expect = 0.73
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD D G++G G GD GD GD D + DSG
Sbjct: 238 GDVADFGDSGDSGGSGDSGDFGDSGDFGDSGDSG 271
Score = 36.6 bits (83), Expect = 0.73
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
D GD G++GG GD GD GD DS + D G
Sbjct: 242 DFGDSGDSGGSGDSGDFGDSGDFGDSGDSGDFG 274
Score = 36.6 bits (83), Expect = 0.73
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ G GD GD GD DS + DSG
Sbjct: 250 GGSGDSGDFGDSGDFGDSGDSGDFGDSGDFGDSG 283
Score = 36.2 bits (82), Expect = 0.95
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
DSGD G++G GD GD GD D+ + DSG
Sbjct: 182 DSGDFGDSGDSGDFGDSGDFGDSGDAGDFGDSG 214
Score = 36.2 bits (82), Expect = 0.95
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD D G++GG G GD GD GD D + SG
Sbjct: 62 GDVADFGDSGGSGGSGDSGDIGDSGDFGDSGGSG 95
Score = 36.2 bits (82), Expect = 0.95
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD GD GD S DSG
Sbjct: 190 GDSGDFGDSGDFGDSGDAGDFGDSGGSGGSGDSG 223
Score = 35.8 bits (81), Expect = 1.2
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD + G G G GD GD DS + DSG
Sbjct: 59 GDSGDVADFGDSGGSGGSGDSGDIGDSGDFGDSG 92
Score = 35.8 bits (81), Expect = 1.2
Identities = 16/36 (44%), Positives = 18/36 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGAL 232
GD GD G +G GD GD GD DS + G L
Sbjct: 86 GDFGDSGGSGDSGDSGDFGDSGDSGDSGDSGTLGTL 121
Score = 35.4 bits (80), Expect = 1.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSG G +G GD GD GD S + DSG
Sbjct: 68 GDSGGSGGSGDSGDIGDSGDFGDSGGSGDSGDSG 101
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD G G DS + DSG
Sbjct: 196 GDSGDFGDSGDAGDFGDSGGSGGSGDSGDIGDSG 229
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD G++G + GD GD G DS + DSG
Sbjct: 229 GDFGDFGDSGDVADFGDSGDSGGSGDSGDFGDSG 262
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ G GD G GD DS + DSG
Sbjct: 74 GGSGDSGDIGDSGDFGDSGGSGDSGDSGDFGDSG 107
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD + GG G GD GD D D + DSG
Sbjct: 160 GDCGDVADFGGSGGSGDSGDFWDSGDFGDSGDSG 193
Score = 34.7 bits (78), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GD GD G +GG GD GD GD D + D
Sbjct: 208 GDFGDSGGSGGSGDSGDIGDSGDFGDFGDSGD 239
Score = 34.3 bits (77), Expect = 3.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ G GD GD GD D + DSG
Sbjct: 217 GGSGDSGDIGDSGDFGDFGDSGDVADFGDSGDSG 250
Score = 34.3 bits (77), Expect = 3.6
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ G GD GD GD D + DSG
Sbjct: 295 GGSGDSGDIGDSGDFGDFGDSGDVADFGDSGDSG 328
Score = 33.9 bits (76), Expect = 4.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD G++G + GD GD G DS + D G
Sbjct: 307 GDFGDFGDSGDVADFGDSGDSGGSGDSGDSGDFG 340
Score = 33.9 bits (76), Expect = 4.7
Identities = 16/34 (47%), Positives = 17/34 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G+ G GD GD D DS SG
Sbjct: 265 GDSGDSGDFGDSGDFGDSGDVADFGDSGGSGGSG 298
Score = 33.9 bits (76), Expect = 4.7
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD G+ G GD GD GD DS + +D G
Sbjct: 256 GDFGDSGDFGDSGDSGDFGDSGDFGDSGDVADFG 289
Score = 33.9 bits (76), Expect = 4.7
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSG G +G GD GD GD DS + +D G
Sbjct: 289 GDSGGSGGSGDSGDIGDSGDFGDFGDSGDVADFG 322
Score = 33.5 bits (75), Expect = 6.2
Identities = 16/34 (47%), Positives = 17/34 (49%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD GD G+ G GD D GD DS DSG
Sbjct: 301 GDIGDSGDFGDFGDSGDVADFGDSGDSGGSGDSG 334
Score = 33.5 bits (75), Expect = 6.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ GD GD GD DS + DSG
Sbjct: 172 GGSGDSGDFWDSGDFGDSGDSGDFGDSGDFGDSG 205
Score = 33.5 bits (75), Expect = 6.2
Identities = 15/31 (48%), Positives = 18/31 (57%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GDSGD G++G GD D GD DS G+
Sbjct: 458 GDSGDSGDSGHSGDSGDLRDSGDSGDSALGA 488
Score = 33.5 bits (75), Expect = 6.2
Identities = 18/37 (48%), Positives = 20/37 (53%), Gaps = 3/37 (8%)
Query: 197 GDSGDGGNNGGGSGHGDKG---DGGDEDDSDNGSDSG 230
GDSGD G++G GD G D GD DS DSG
Sbjct: 220 GDSGDIGDSGDFGDFGDSGDVADFGDSGDSGGSGDSG 256
Score = 33.5 bits (75), Expect = 6.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSG G++G GD GD GD D + D G
Sbjct: 247 GDSGGSGDSGDFGDSGDFGDSGDSGDFGDSGDFG 280
Score = 33.5 bits (75), Expect = 6.2
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDD-SDNGSDSGA 231
GD GD G++G GD GD GD D D+G G+
Sbjct: 184 GDFGDSGDSGDFGDSGDFGDSGDAGDFGDSGGSGGS 219
Score = 33.5 bits (75), Expect = 6.2
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD D GD S DSG
Sbjct: 268 GDSGDFGDSGDFGDSGDVADFGDSGGSGGSGDSG 301
Score = 33.1 bits (74), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD ++G GD GD GD D + D+G
Sbjct: 175 GDSGDFWDSGDFGDSGDSGDFGDSGDFGDSGDAG 208
Score = 33.1 bits (74), Expect = 8.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD + G G GD GD DS + DSG
Sbjct: 235 GDSGDVADFGDSGDSGGSGDSGDFGDSGDFGDSG 268
Score = 33.1 bits (74), Expect = 8.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GDSGD G++G GD GD GD D SG
Sbjct: 142 GDSGDSGDSGAIGDSGDFGDCGDVADFGGSGGSG 175
>ref|YP_068017.1| LMP1 [Cercopithecine herpesvirus 15] gi|18025540|gb|AAB37763.2|
LMP1 [cercopithicine herpesvirus 15]
Length = 589
Score = 45.1 bits (105), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GG+ GDGGN GG+G G GDGG+ D NG+
Sbjct: 260 GGNEGDGGNRDGGNGDGGNGDGGNVGDGGNGN 291
Score = 44.7 bits (104), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
GG+ GDGGN GG+G G GDGG+ D + G D
Sbjct: 281 GGNVGDGGNGNGGNGDGGNGDGGNGDGGNEGPD 313
Score = 40.4 bits (93), Expect = 0.050
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 15/49 (30%)
Query: 197 GDSGDGGNNGGGS---------------GHGDKGDGGDEDDSDNGSDSG 230
GD G+GGN GGG GD GDGGD +D + G D G
Sbjct: 360 GDGGNGGNGGGGGDPDHLPHPIQATDGGNSGDGGDGGDGEDGEGGGDRG 408
Score = 37.0 bits (84), Expect = 0.56
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 197 GDSGDGGNNG-GGSGHGDKGDGGDED--DSDNGSD 228
G +GDGGN G GG+G+G GDGG+ D + D G++
Sbjct: 276 GGNGDGGNVGDGGNGNGGNGDGGNGDGGNGDGGNE 310
Score = 33.9 bits (76), Expect = 4.7
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 10/44 (22%)
Query: 197 GDSGDGGNNGGG----------SGHGDKGDGGDEDDSDNGSDSG 230
G GDGGN G G+G +GDGGD D + G+ G
Sbjct: 327 GGEGDGGNEGPDPLPYPIQATDGGNGGQGDGGDGDGGNGGNGGG 370
Score = 33.5 bits (75), Expect = 6.2
Identities = 17/37 (45%), Positives = 23/37 (61%), Gaps = 3/37 (8%)
Query: 197 GDSGDGGN-NGGGSGHGDKGDGGDED--DSDNGSDSG 230
G +GDGGN +GG G G G+GG+ D + D G+ G
Sbjct: 271 GGNGDGGNGDGGNVGDGGNGNGGNGDGGNGDGGNGDG 307
>emb|CAG82021.1| unnamed protein product [Yarrowia lipolytica CLIB99]
gi|50548483|ref|XP_501711.1| hypothetical protein
[Yarrowia lipolytica]
Length = 1114
Score = 43.5 bits (101), Expect = 0.006
Identities = 23/48 (47%), Positives = 27/48 (55%), Gaps = 5/48 (10%)
Query: 187 VVAPTMVVVGG-DSGDGGN----NGGGSGHGDKGDGGDEDDSDNGSDS 229
V AP+ GG D D GN N G+G G G+G D D SDNG+DS
Sbjct: 659 VTAPSATSTGGYDGSDSGNGSDDNDDGNGDGSNGNGSDNDGSDNGNDS 706
Score = 38.9 bits (89), Expect = 0.15
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
D D GN+ G+G+G G+G DD+ NGSD
Sbjct: 698 DGSDNGNDSDGNGNGSDGNGNGSDDNGNGSD 728
Score = 37.0 bits (84), Expect = 0.56
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDG-GDEDDSDNGSDSGA 231
G D +G + G +G+G G+G G + ++ NGSDSGA
Sbjct: 1018 GSDGSNGNGSDGSNGNGSDGNGNGSDGNNSNGSDSGA 1054
Score = 36.6 bits (83), Expect = 0.73
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G DS GN G+G+G +G DD+ NGSD
Sbjct: 703 GNDSDGNGNGSDGNGNGSDDNGNGSDDNGNGSD 735
Score = 35.8 bits (81), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G+ DG N G G+G+ DG + + SD+G+ +G
Sbjct: 1024 GNGSDGSNGNGSDGNGNGSDGNNSNGSDSGASNG 1057
Score = 35.8 bits (81), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G +G+G + G+G D G+G D++ + NGSD
Sbjct: 758 GSNGNGSDGSNGNGSDDNGNGSDDNGNGNGSD 789
Score = 35.4 bits (80), Expect = 1.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 197 GDSGDGGNNGG----GSGHGDKGDGGDEDDSDNGSDSGA 231
G+ DG N G G+G D G+G DD+ NGSD +
Sbjct: 761 GNGSDGSNGNGSDDNGNGSDDNGNGNGSDDNGNGSDDNS 799
Score = 35.4 bits (80), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G D D GN G +G+G DG D + +G+ +G+
Sbjct: 678 GSDDNDDGNGDGSNGNGSDNDGSDNGNDSDGNGNGS 713
Score = 34.3 bits (77), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D +G + G +G+G +G DD+ NGSD
Sbjct: 894 GSDGSNGNGSDGSNGNGSDDNGNGSDDNGNGSD 926
Score = 34.3 bits (77), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSD 228
G D G++ G+G+G +G DD+ NGSD
Sbjct: 771 GSDDNGNGSDDNGNGNGSDDNGNGSDDNSNGSD 803
Score = 33.5 bits (75), Expect = 6.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
G G GN G+G+G G G+ D NG+ S
Sbjct: 931 GSDGSNGNGSDGNGNGSDGSNGNGSDGSNGNGS 963
Score = 33.5 bits (75), Expect = 6.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
G G GN G+G+G G G+ D NG+ S
Sbjct: 871 GSDGSNGNGSDGNGNGSDGSNGNGSDGSNGNGS 903
Score = 33.5 bits (75), Expect = 6.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
G G GN G+G+G G G+ D NG+ S
Sbjct: 740 GSDGSNGNGSDGNGNGSDGSNGNGSDGSNGNGS 772
>gb|AAY28519.1| biofilm-associated protein [Staphylococcus epidermidis]
Length = 2742
Score = 43.1 bits (100), Expect = 0.008
Identities = 22/49 (44%), Positives = 25/49 (50%), Gaps = 9/49 (18%)
Query: 191 TMVVVGGDSGDGGNNGGG---------SGHGDKGDGGDEDDSDNGSDSG 230
T V+ D+ D GNN G SG+GD GD DSDN SDSG
Sbjct: 2573 TTVIDSDDNSDNGNNSGAGDNSDSDNNSGNGDNSGAGDNSDSDNNSDSG 2621
Score = 37.0 bits (84), Expect = 0.56
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GD+ D NN SG+GD + GD DSDN S +G
Sbjct: 2627 GDNSDSDNN---SGNGDSSNAGDNSDSDNNSGNG 2657
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/36 (44%), Positives = 21/36 (57%), Gaps = 3/36 (8%)
Query: 197 GDSGDGGNNG---GGSGHGDKGDGGDEDDSDNGSDS 229
GDS + G+N SG+GD GD DSDN S++
Sbjct: 2639 GDSSNAGDNSDSDNNSGNGDNSSAGDNSDSDNSSNN 2674
Score = 33.9 bits (76), Expect = 4.7
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 198 DSGDGGNNGGG--------SGHGDKGDGGDEDDSDNGSDSG 230
+SG+G N+G G S GD + GD DSDN S +G
Sbjct: 2599 NSGNGDNSGAGDNSDSDNNSDSGDNSNAGDNSDSDNNSGNG 2639
>ref|YP_177781.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|41353641|emb|CAE55352.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium tuberculosis H37Rv]
gi|7476131|pir||B70893 hypothetical glycine-rich protein
Rv1068c - Mycobacterium tuberculosis (strain H37RV)
gi|6226412|sp|O53416|PG20_MYCTU Hypothetical PE-PGRS
family protein PE_PGRS20
Length = 463
Score = 42.7 bits (99), Expect = 0.010
Identities = 18/34 (52%), Positives = 22/34 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG GDGGN G G+G G KG+GG+ D G D+
Sbjct: 385 GGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDA 418
Score = 33.1 bits (74), Expect = 8.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG +G GG G G+ D G+GG D+ N + G
Sbjct: 287 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGG 321
>ref|NP_854752.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|31617847|emb|CAD93957.1| PE-PGRS FAMILY PROTEIN
[Mycobacterium bovis AF2122/97]
Length = 763
Score = 42.7 bits (99), Expect = 0.010
Identities = 18/34 (52%), Positives = 22/34 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG GDGGN G G+G G KG+GG+ D G D+
Sbjct: 685 GGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDA 718
Score = 33.1 bits (74), Expect = 8.0
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Query: 195 VGGDSGDGGN---------NGG-GSGHGDKGDGGDEDDSDNGSDSG 230
VGG++G+GGN NGG G G G G GG + ++G D G
Sbjct: 564 VGGNAGNGGNGGSAGWLSGNGGTGGGGGTAGAGGQGGNGNSGIDPG 609
Score = 33.1 bits (74), Expect = 8.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG +G GG G G+ D G+GG D+ N + G
Sbjct: 590 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGG 624
>ref|YP_034724.1| surface protein, pentapeptide repeat domain [Bacillus thuringiensis
serovar konkukian str. 97-27] gi|49332036|gb|AAT62682.1|
surface protein, pentapeptide repeat domain [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 342
Score = 42.7 bits (99), Expect = 0.010
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
Query: 197 GDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSG 230
GD+G GGN GGSG GD G G G D+ GS SG
Sbjct: 202 GDNGSGGNGSGGSGSGDNGSGGSGSGDNGSGGSGSG 237
Score = 41.6 bits (96), Expect = 0.023
Identities = 16/35 (45%), Positives = 21/35 (59%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GD+G GGN GG+G GD G G D + D+G+
Sbjct: 77 GDNGSGGNGSGGNGSGDNGSGDDGSGGNGSGDNGS 111
Score = 39.7 bits (91), Expect = 0.086
Identities = 17/35 (48%), Positives = 19/35 (53%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SGD G+ G GSG GD G DD G+ SG
Sbjct: 73 GSGSGDNGSGGNGSGGNGSGDNGSGDDGSGGNGSG 107
Score = 38.5 bits (88), Expect = 0.19
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 2/36 (5%)
Query: 197 GDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSG 230
G SG G N GGSG GD G G G D+ GS SG
Sbjct: 212 GGSGSGDNGSGGSGSGDNGSGGSGSGDNGSGGSGSG 247
Score = 38.5 bits (88), Expect = 0.19
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GD+G GGN GG+G G G GG+ + SG+
Sbjct: 167 GDNGSGGNGSGGNGSGGNGSGGNGSGGNGSGSSGS 201
Score = 38.5 bits (88), Expect = 0.19
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 2/36 (5%)
Query: 197 GDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSG 230
G SG G N GGSG GD G G G D+ GS SG
Sbjct: 222 GGSGSGDNGSGGSGSGDNGSGGSGSGDNGSGGSGSG 257
Score = 38.5 bits (88), Expect = 0.19
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 2/36 (5%)
Query: 197 GDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSG 230
G SG G N GGSG GD G G G D+ GS SG
Sbjct: 232 GGSGSGDNGSGGSGSGDNGSGGSGSGDNGSGGSGSG 267
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G GGN GGSG GD G GG+ + +G+
Sbjct: 117 GGNGSGGNGSGGSGSGDNGSGGNGSGGNGSGGNGS 151
Score = 38.1 bits (87), Expect = 0.25
Identities = 17/31 (54%), Positives = 19/31 (60%), Gaps = 1/31 (3%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
GD+G GGN GG+G G G GG DNGS
Sbjct: 107 GDNGSGGNGSGGNGSGGNGSGG-SGSGDNGS 136
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 19/35 (53%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G GGN G SG GD G GG+ D+G+
Sbjct: 187 GGNGSGGNGSGSSGSGDNGSGGNGSGGSGSGDNGS 221
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G GGN GG+G G G GG+ S D+G+
Sbjct: 172 GGNGSGGNGSGGNGSGGNGSGGNGSGSSGSGDNGS 206
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GD+G GGN GG+G G G GG+ + SG+
Sbjct: 132 GDNGSGGNGSGGNGSGGNGSGGNGSGGNGSGGSGS 166
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G GGN GGSG GD G GG+ + +G+
Sbjct: 152 GGNGSGGNGSGGSGSGDNGSGGNGSGGNGSGGNGS 186
Score = 37.7 bits (86), Expect = 0.33
Identities = 18/31 (58%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS 227
G SG G N GGSG GD G GG DNGS
Sbjct: 242 GGSGSGDNGSGGSGSGDNGSGGS-GSGDNGS 271
Score = 37.0 bits (84), Expect = 0.56
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 198 DSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
DSG GN GSG GD G GG+ + D+G+
Sbjct: 63 DSGSDGNGSDGSGSGDNGSGGNGSGGNGSGDNGS 96
Score = 36.6 bits (83), Expect = 0.73
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G GGN GG+G G G GG+ D+G+
Sbjct: 137 GGNGSGGNGSGGNGSGGNGSGGNGSGGSGSGDNGS 171
Score = 35.4 bits (80), Expect = 1.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDN 225
G SG G N GGSG GD G GG N
Sbjct: 252 GGSGSGDNGSGGSGSGDNGSGGSGSQGGN 280
Score = 35.0 bits (79), Expect = 2.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GD+G G + GG+G GD G GG+ + +G+
Sbjct: 92 GDNGSGDDGSGGNGSGDNGSGGNGSGGNGSGGNGS 126
Score = 35.0 bits (79), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
GD G GGN G +G G G GG+ + SG+
Sbjct: 97 GDDGSGGNGSGDNGSGGNGSGGNGSGGNGSGGSGS 131
Score = 35.0 bits (79), Expect = 2.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 197 GDSGDGGNNGGGSGHGDKGDG--GDEDDSDNGSDSG 230
G +G GGN GG+G G G G G D+ G+ SG
Sbjct: 177 GGNGSGGNGSGGNGSGGNGSGSSGSGDNGSGGNGSG 212
Score = 34.3 bits (77), Expect = 3.6
Identities = 15/34 (44%), Positives = 17/34 (49%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
G SGD G+ G GSG G G D+ GS S
Sbjct: 243 GSGSGDNGSGGSGSGDNGSGGSGSGDNGSGGSGS 276
Score = 33.9 bits (76), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSGA 231
G +G G N GG+G G G GG+ D+G+
Sbjct: 102 GGNGSGDNGSGGNGSGGNGSGGNGSGGSGSGDNGS 136
Score = 33.9 bits (76), Expect = 4.7
Identities = 15/35 (42%), Positives = 17/35 (47%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SG G+ G GSG GD G + GS SG
Sbjct: 183 GNGSGGNGSGGNGSGSSGSGDNGSGGNGSGGSGSG 217
Score = 33.1 bits (74), Expect = 8.0
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G SG G N GG+G G G G D+ GS SG
Sbjct: 197 GSSGSGDNGSGGNGSGGSGSG---DNGSGGSGSG 227
Score = 33.1 bits (74), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G +G GGN GG+G G G G D+ G+ SG
Sbjct: 147 GGNGSGGNGSGGNGSGGSGSG---DNGSGGNGSG 177
Score = 33.1 bits (74), Expect = 8.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G +G GGN GG+G G G G D+ G+ SG
Sbjct: 112 GGNGSGGNGSGGNGSGGSGSG---DNGSGGNGSG 142
>ref|ZP_00380257.1| COG0744: Membrane carboxypeptidase (penicillin-binding protein)
[Brevibacterium linens BL2]
Length = 793
Score = 42.7 bits (99), Expect = 0.010
Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 2/36 (5%)
Query: 196 GGDSGDGGNNGGGS--GHGDKGDGGDEDDSDNGSDS 229
GGD+G GG+NG GS G GD G G D DNG S
Sbjct: 743 GGDTGSGGDNGSGSDTGGGDNGSGSDTGGGDNGGGS 778
Score = 41.2 bits (95), Expect = 0.030
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD+G GG+NG G G G GD G D+ +GSD+G
Sbjct: 726 GGDTGSGGDNGSG-GDGGGGDTGSGGDNGSGSDTG 759
Score = 40.4 bits (93), Expect = 0.050
Identities = 19/36 (52%), Positives = 21/36 (57%), Gaps = 2/36 (5%)
Query: 196 GGDSGDGGNNGGG--SGHGDKGDGGDEDDSDNGSDS 229
GGD+G GG+ GGG GD G G D DNGS S
Sbjct: 732 GGDNGSGGDGGGGDTGSGGDNGSGSDTGGGDNGSGS 767
Score = 37.4 bits (85), Expect = 0.43
Identities = 19/37 (51%), Positives = 23/37 (61%), Gaps = 5/37 (13%)
Query: 197 GDSGDGGNNGGGSGHGDKGDGGDEDDSDNGS--DSGA 231
GD+GDGG+ G G GD G GGD D GS D+G+
Sbjct: 721 GDTGDGGDTGSG---GDNGSGGDGGGGDTGSGGDNGS 754
Score = 33.9 bits (76), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G +GG+ GG GD GD G D+ +G D G
Sbjct: 708 GSSKDEGGDTGGDGDTGDGGDTGSGGDNGSGGDGG 742
>gb|AAK45353.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|15840502|ref|NP_335539.1| PE_PGRS family protein
[Mycobacterium tuberculosis CDC1551]
Length = 533
Score = 42.7 bits (99), Expect = 0.010
Identities = 18/34 (52%), Positives = 22/34 (63%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDS 229
GG GDGGN G G+G G KG+GG+ D G D+
Sbjct: 455 GGTGGDGGNGGLGAGSGAKGNGGNGGDGGKGGDA 488
Score = 33.1 bits (74), Expect = 8.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG +G GG G G+ D G+GG D+ N + G
Sbjct: 357 GGTAGAGGQGGNGNSGIDPGNGGQGADTGNAGNGG 391
>ref|XP_640706.1| hypothetical protein DDB0205614 [Dictyostelium discoideum]
gi|60468720|gb|EAL66722.1| hypothetical protein
DDB0205614 [Dictyostelium discoideum]
Length = 539
Score = 42.7 bits (99), Expect = 0.010
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD G+GGN G G G+ G+GG+ + NG D G
Sbjct: 410 GGDGGNGGNGGNGGNGGNGGNGGNGGNGGNGGDGG 444
Score = 38.1 bits (87), Expect = 0.25
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GG+ G+GGN G G G+ G+GG+ + +G D G
Sbjct: 413 GGNGGNGGNGGNGGNGGNGGNGGNGGNGGDGGDVG 447
Score = 37.0 bits (84), Expect = 0.56
Identities = 15/31 (48%), Positives = 19/31 (60%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNG 226
GG+ G+GGN G G G+ G+GGD D G
Sbjct: 419 GGNGGNGGNGGNGGNGGNGGNGGDGGDVGGG 449
Score = 36.2 bits (82), Expect = 0.95
Identities = 15/35 (42%), Positives = 20/35 (56%)
Query: 196 GGDSGDGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
G GDGGN G G G+ G+GG+ + NG + G
Sbjct: 407 GFAGGDGGNGGNGGNGGNGGNGGNGGNGGNGGNGG 441
>gb|AAD28806.1| adsorption protein [Xanthomonas phage phi-Xv]
Length = 328
Score = 42.7 bits (99), Expect = 0.010
Identities = 21/37 (56%), Positives = 25/37 (66%), Gaps = 2/37 (5%)
Query: 196 GGDSGDGGNNGGGSGHGDKG-DGGDEDDSDNGSDSGA 231
GGD GDGG++GGG G D G DGG + D GSD G+
Sbjct: 159 GGD-GDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGS 194
Score = 40.8 bits (94), Expect = 0.039
Identities = 21/36 (58%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 197 GDSG-DGGNNGGGSGHGDKG-DGGDEDDSDNGSDSG 230
GD G DGG +GG G GD G DGG + SD GSD G
Sbjct: 162 GDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGSDGG 197
Score = 37.7 bits (86), Expect = 0.33
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 200 GDGGNNGGGSGHGD-KGDGGDEDDSDNGSD 228
GDGG++GGG G D GDGG + SD G D
Sbjct: 170 GDGGSDGGGDGGSDGGGDGGSDGGSDGGGD 199
Score = 36.6 bits (83), Expect = 0.73
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 196 GGDSG-DGGNNGGGSGHGDKGDGGDEDDSDNGSDSG 230
GGD G DGG +GG G GD G G D +G G
Sbjct: 169 GGDGGSDGGGDGGSDGGGDGGSDGGSDGGGDGDGDG 204
Score = 33.1 bits (74), Expect = 8.0
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 196 GGDSG-DGGNNGGG--SGHGDKGDGGDEDDSDNGSD 228
GGD G DGG++GGG G GD GDG + D D+ D
Sbjct: 185 GGDGGSDGGSDGGGDGDGDGD-GDGDGDVDGDHPGD 219
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,703,770
Number of Sequences: 2540612
Number of extensions: 20175779
Number of successful extensions: 293101
Number of sequences better than 10.0: 1185
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 388
Number of HSP's that attempted gapping in prelim test: 242066
Number of HSP's gapped (non-prelim): 27047
length of query: 262
length of database: 863,360,394
effective HSP length: 125
effective length of query: 137
effective length of database: 545,783,894
effective search space: 74772393478
effective search space used: 74772393478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)
Lotus: description of TM0008.6