BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.10
(155 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA80334.1| ubiquitin extension protein [Lupinus albus] gi|5... 310 6e-84
gb|AAQ76040.1| ubiquitin extension protein [Cucumis sativus] 310 8e-84
emb|CAA80333.1| ubiquitin extension protein [Lupinus albus] gi|5... 309 2e-83
gb|AAL66206.1| ubiquitin extension protein [Pyrus communis] 309 2e-83
emb|CAA71132.1| ubiquitin extension protein [Solanum tuberosum] ... 308 2e-83
emb|CAA11268.1| ubiquitin extension protein [Nicotiana tabacum] ... 308 3e-83
gb|AAO38879.1| ubiquitin/ribosomal fusion protein [Malus x domes... 306 8e-83
emb|CAA77735.1| ubiquitin monomer/ribosomal protein [Solanum tub... 305 2e-82
gb|AAN28749.1| At2g47110/F14M4.6 [Arabidopsis thaliana] gi|21593... 305 3e-82
gb|AAG13985.1| ubiquitin/ribosomal protein 27a [Prunus avium] 305 3e-82
emb|CAB71885.1| ubiquitin extension protein (UBQ5) [Arabidopsis ... 303 9e-82
gb|AAA62699.1| ubiquitin 297 5e-80
ref|NP_908721.1| ubiquitin / ribosomal protein S27a [Oryza sativ... 297 5e-80
pir||JS0657 ubiquitin / ribosomal protein S27a - maize gi|902527... 296 9e-80
ref|XP_475630.1| putative ubiquitin / ribosomal protein S27a [Or... 296 9e-80
gb|AAA62698.1| ubiquitin 296 1e-79
gb|AAM62617.1| ubiquitin extension protein, putative [Arabidopsi... 291 3e-78
gb|AAA70104.1| ubiquitin fusion protein gi|1589387|prf||2211240A... 291 3e-78
gb|AAW56553.1| ubiquitin/s27a 40s ribosomal protein [Nicotiana b... 291 5e-78
emb|CAA63150.1| ORF [Zea mays] 290 8e-78
>emb|CAA80334.1| ubiquitin extension protein [Lupinus albus] gi|541954|pir||S40240
ubiquitin/ribosomal protein S27a fusion protein - white
lupine
Length = 155
Score = 310 bits (795), Expect = 6e-84
Identities = 152/155 (98%), Positives = 153/155 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNAECGAGTFMANHFDRHYCGKCG TYVYQKA A
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGQTYVYQKADA 155
>gb|AAQ76040.1| ubiquitin extension protein [Cucumis sativus]
Length = 156
Score = 310 bits (794), Expect = 8e-84
Identities = 151/153 (98%), Positives = 152/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVY KA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKA 153
>emb|CAA80333.1| ubiquitin extension protein [Lupinus albus] gi|541953|pir||S40239
ubiquitin/ribosomal protein S27a fusion protein - white
lupine
Length = 155
Score = 309 bits (791), Expect = 2e-83
Identities = 151/155 (97%), Positives = 152/155 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPN ECGAGTFMANHFDRHYCGKCG TYVYQKA A
Sbjct: 121 CPNTECGAGTFMANHFDRHYCGKCGKTYVYQKADA 155
>gb|AAL66206.1| ubiquitin extension protein [Pyrus communis]
Length = 154
Score = 309 bits (791), Expect = 2e-83
Identities = 151/153 (98%), Positives = 152/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDDS KVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSRKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>emb|CAA71132.1| ubiquitin extension protein [Solanum tuberosum]
gi|25294255|pir||T52334 ubiquitin extension protein
[imported] - potato
Length = 156
Score = 308 bits (790), Expect = 2e-83
Identities = 151/153 (98%), Positives = 152/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK +KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>emb|CAA11268.1| ubiquitin extension protein [Nicotiana tabacum]
gi|59800131|gb|AAX07419.1| ubiquitin/s27a 40S ribosomal
protein [Nicotiana benthamiana] gi|25294256|pir||T52335
ubiquitin extension protein [imported] - common tobacco
Length = 156
Score = 308 bits (789), Expect = 3e-83
Identities = 151/155 (97%), Positives = 152/155 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK +KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNAECGAGTFMANHFDRHYCGKCGLTYVY KA A
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGA 155
>gb|AAO38879.1| ubiquitin/ribosomal fusion protein [Malus x domestica]
Length = 156
Score = 306 bits (785), Expect = 8e-83
Identities = 149/153 (97%), Positives = 152/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSD+IDNVKAKIQDKEGIPPDQQRLIFAGKQLED RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDDSG+VQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGQVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>emb|CAA77735.1| ubiquitin monomer/ribosomal protein [Solanum tuberosum]
gi|19397|emb|CAA41207.1| ubiquitin [Lycopersicon
esculentum] gi|282979|pir||S25305 ubiquitin / ribosomal
protein S27a - potato gi|349055|gb|AAA19247.1|
ubiquitin/ribosomal fusion protein
Length = 156
Score = 305 bits (782), Expect = 2e-82
Identities = 149/153 (97%), Positives = 151/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK +KVKLAVLQFYKVDD+GKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVY KA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKA 153
>gb|AAN28749.1| At2g47110/F14M4.6 [Arabidopsis thaliana] gi|21593980|gb|AAM65909.1|
ubiquitin extension protein (UBQ6) [Arabidopsis
thaliana] gi|22655410|gb|AAM98297.1| At2g47110/F14M4.6
[Arabidopsis thaliana] gi|3522953|gb|AAC34235.1|
ubiquitin extension protein (UBQ6) [Arabidopsis
thaliana] gi|14030651|gb|AAK53000.1| At2g47110/F14M4.6
[Arabidopsis thaliana] gi|18407264|ref|NP_566095.1|
ubiquitin extension protein 6 (UBQ6) / 40S ribosomal
protein S27A (RPS27aB) [Arabidopsis thaliana]
gi|166936|gb|AAA32907.1| ubiquitin extension protein
(UBQ6)
Length = 157
Score = 305 bits (780), Expect = 3e-82
Identities = 149/155 (96%), Positives = 151/155 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVD SGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK A
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGA 155
>gb|AAG13985.1| ubiquitin/ribosomal protein 27a [Prunus avium]
Length = 156
Score = 305 bits (780), Expect = 3e-82
Identities = 149/153 (97%), Positives = 151/153 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK +KVKLAVLQFYK DDSGKVQ+LRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKGDDSGKVQKLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
>emb|CAB71885.1| ubiquitin extension protein (UBQ5) [Arabidopsis thaliana]
gi|21537196|gb|AAM61537.1| ubiquitin extension protein
UBQ5 [Arabidopsis thaliana] gi|22655050|gb|AAM98116.1|
At3g62250/T17J13_210 [Arabidopsis thaliana]
gi|15529190|gb|AAK97689.1| AT3g62250/T17J13_210
[Arabidopsis thaliana] gi|15228715|ref|NP_191784.1|
ubiquitin extension protein 5 (UBQ5) / 40S ribosomal
protein S27A (RPS27aC) [Arabidopsis thaliana]
gi|166934|gb|AAA32906.1| ubiquitin extension protein
(UBQ5)
Length = 157
Score = 303 bits (776), Expect = 9e-82
Identities = 147/152 (96%), Positives = 150/152 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYK+D SGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 152
CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQK 152
>gb|AAA62699.1| ubiquitin
Length = 155
Score = 297 bits (761), Expect = 5e-80
Identities = 147/155 (94%), Positives = 150/155 (95%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDS-GKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKK KHKH+KVKLAVLQFYKVDDS GKV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDSTGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPNA+CGAGTFMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 155
>ref|NP_908721.1| ubiquitin / ribosomal protein S27a [Oryza sativa (japonica
cultivar-group)] gi|13366017|dbj|BAB39294.1| ubiquitin /
ribosomal protein S27a.1 [Oryza sativa (japonica
cultivar-group)]
Length = 155
Score = 297 bits (761), Expect = 5e-80
Identities = 147/155 (94%), Positives = 150/155 (95%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKK KHKH+KVKLAVLQFYKVDD +GKV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPNAECGAGTFMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYNQQA 155
>pir||JS0657 ubiquitin / ribosomal protein S27a - maize gi|902527|gb|AAA70105.1|
ubiquitin fusion protein gi|168651|gb|AAA33519.1|
ubiquitin fusion protein gi|1589388|prf||2211240B
ubiquitin fusion protein
Length = 155
Score = 296 bits (759), Expect = 9e-80
Identities = 146/155 (94%), Positives = 149/155 (95%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDD +GKV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPN ECGAG FMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 155
>ref|XP_475630.1| putative ubiquitin / ribosomal protein S27a [Oryza sativa (japonica
cultivar-group)] gi|55168056|gb|AAV43924.1| putative
ubiquitin fusion protein [Oryza sativa (japonica
cultivar-group)] gi|51038109|gb|AAT93912.1| putative
ubiquitin extension protein [Oryza sativa (japonica
cultivar-group)]
Length = 155
Score = 296 bits (759), Expect = 9e-80
Identities = 146/155 (94%), Positives = 150/155 (96%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVDD +GKV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPN +CGAGTFMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 155
>gb|AAA62698.1| ubiquitin
Length = 155
Score = 296 bits (758), Expect = 1e-79
Identities = 146/155 (94%), Positives = 150/155 (96%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKK KHKH+KVKLAVLQFYKVDD +GKV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPNA+CGAGTFMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 155
>gb|AAM62617.1| ubiquitin extension protein, putative [Arabidopsis thaliana]
gi|8778573|gb|AAF79581.1| F28C11.5 [Arabidopsis
thaliana] gi|15220742|ref|NP_173755.1| ubiquitin
extension protein, putative / 40S ribosomal protein S27A
(RPS27aA) [Arabidopsis thaliana] gi|25294254|pir||H86367
protein F28C11.5 [imported] - Arabidopsis thaliana
gi|9295695|gb|AAF87001.1| F26F24.28 [Arabidopsis
thaliana]
Length = 156
Score = 291 bits (746), Expect = 3e-78
Identities = 141/153 (92%), Positives = 147/153 (95%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKH H+KVKLAVLQFYKVD SGKVQRL+KE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CP+ CG GTFMA+HFDRHYCGKCG TYV++KA
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 153
>gb|AAA70104.1| ubiquitin fusion protein gi|1589387|prf||2211240A ubiquitin fusion
protein
Length = 155
Score = 291 bits (746), Expect = 3e-78
Identities = 143/155 (92%), Positives = 148/155 (95%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLVLRLRGGAKKRKKKTYTKPKK KHKH+KVKL+VLQFYKVDD + KV RLRK
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKTKHKHKKVKLSVLQFYKVDDTTSKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
ECPN+ECGAG FMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 ECPNSECGAGVFMANHFDRHYCGKCGLTYVYNQKA 155
>gb|AAW56553.1| ubiquitin/s27a 40s ribosomal protein [Nicotiana benthamiana]
Length = 156
Score = 291 bits (744), Expect = 5e-78
Identities = 142/155 (91%), Positives = 149/155 (95%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITL+VESSDTIDNVKAKI+DKEGIPP QQRLIFAGKQ+EDG TLADYN
Sbjct: 1 MQIFVKTLTGKTITLKVESSDTIDNVKAKIEDKEGIPPYQQRLIFAGKQVEDGCTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRL GGAKKRKKKTYTKPKKIKHK +KVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLHGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNA+CGAGT+MANHFDR+YCGKCGLTYVY KA A
Sbjct: 121 CPNAKCGAGTYMANHFDRYYCGKCGLTYVYNKAGA 155
>emb|CAA63150.1| ORF [Zea mays]
Length = 155
Score = 290 bits (742), Expect = 8e-78
Identities = 143/155 (92%), Positives = 148/155 (95%), Gaps = 1/155 (0%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDD-SGKVQRLRK 119
IQKESTLHLV+RLRGGAKK KKKTYTKPKKIKHKH+KVKLAVLQFYKVDD +GKV RLRK
Sbjct: 61 IQKESTLHLVVRLRGGAKKPKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 120 ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAA 154
+CPNAEC AG FMANHFDRHYCGKCGLTYVY + A
Sbjct: 121 DCPNAECHAGVFMANHFDRHYCGKCGLTYVYNQQA 155
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,471,903
Number of Sequences: 2540612
Number of extensions: 9614685
Number of successful extensions: 36308
Number of sequences better than 10.0: 1683
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 33359
Number of HSP's gapped (non-prelim): 2929
length of query: 155
length of database: 863,360,394
effective HSP length: 117
effective length of query: 38
effective length of database: 566,108,790
effective search space: 21512134020
effective search space used: 21512134020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)
Lotus: description of TM0008.10