BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0550.1
         (1631 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g17140 hypothetical protein                                       1101  0.0
At1g48090 unknown protein                                             487  e-137
At4g17130 hypothetical protein                                        142  2e-33
At4g21490 NADH dehydrogenase like protein                             125  2e-28
At2g20800 putative NADH-ubiquinone oxireductase                       117  7e-26
At4g05020 unknown protein                                             114  4e-25
At4g28220 putative NADH dehydrogenase                                 110  9e-24
At5g24740 VPS13 - like protein                                         89  2e-17
At1g07180 unknown protein                                              62  2e-09
At2g29990 putative NADH dehydrogenase (ubiquinone oxidoreductase)      59  2e-08
At3g19190 hypothetical protein                                         42  0.003
At2g14510 putative receptor-like protein kinase                        34  0.61
At2g36570 putative receptor-like protein kinase                        33  1.0
At3g53030 serine protein kinase - like                                 33  1.8
At3g28344 P-glycoprotein, 5' partial                                   33  1.8
At1g53090 phytochrome A supressor spa1, putative                       33  1.8
At4g33400 Dem -like protein                                            32  3.0
At5g10280 putative transcription factor MYB92                          32  3.9
At5g55760 transcription regulator Sir2-like protein                    31  5.2
At5g02390 putative protein                                             31  5.2

>At4g17140 hypothetical protein
          Length = 1322

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 659/1456 (45%), Positives = 856/1456 (58%), Gaps = 263/1456 (18%)

Query: 143  LFSTIIGNLKLSISNIHIRYEDGES------NPGHPFAAGVMLDKLSAVTVDDTGKETFI 196
            + +TI+GNLKLSISNIHIRYED ES      NPGHPF+AGV L+KLSAVT+D++GKETFI
Sbjct: 4    VINTIVGNLKLSISNIHIRYEDLESLCYKCSNPGHPFSAGVTLEKLSAVTIDESGKETFI 63

Query: 197  TGGALDLIQKL-----SSMDLFAYQRITKNINSFL---NCKMRIVKQPLNPKSLSCWSVE 248
            TGG LD IQK+     + ++L          N  L   N  M  + +    +     SVE
Sbjct: 64   TGGTLDSIQKVPIVRSTEIELGCSLEGLVFCNRSLYETNIWMTALGKEYPCQETKAGSVE 123

Query: 249  LDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEPVTGK 308
            LDRLA YLDSD+ PWH  K WE L P EW QIF++GTKDGKPAD L +KH Y+L+PV+G 
Sbjct: 124  LDRLAFYLDSDMSPWHIDKPWEVLTPFEWDQIFRYGTKDGKPADCLTRKHFYILQPVSGN 183

Query: 309  GNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHFR 368
              YSK   NE +++ QPLQKA VNLDDVT+ LSK GYRD+MKLADNFAAFNQRLKYAH+R
Sbjct: 184  AKYSKSQANESSNAVQPLQKAYVNLDDVTLCLSKGGYRDVMKLADNFAAFNQRLKYAHYR 243

Query: 369  PPVPVKADPRSWWKYAYRAVSDQMKKA--------------------------------- 395
            P VPVK D +SWWKYAYR VS+Q+K A                                 
Sbjct: 244  PSVPVKIDAKSWWKYAYRVVSEQIKIARYLNVNLYLFFLTDAGFLRNLHRLWKHLPLQFL 303

Query: 396  SGKMSWEQVLRYTSLRKRYIYLYASLLKSDPSQVTISGNKEIEDLDHELDIELILQWRML 455
            +G+MSWE VL+YTSLRKRYI  YASLLKSD S++ +  ++EIE LD ELD ++ILQWRML
Sbjct: 304  TGRMSWEHVLKYTSLRKRYITQYASLLKSDISRIVVDDDEEIEALDRELDTDVILQWRML 363

Query: 456  AHKFVEQSAEPNLSVRKQKAGNSWWSFGWTGKSPKEDSEELSFSEEDWNRLNKIIGYKEG 515
            AHKFVE+S +     +KQ+A +SWW FG   +    + E + F++EDW RLNK+IGYKEG
Sbjct: 364  AHKFVERSVQAENYSKKQQAKSSWWPFGGKSEVSGGEGESIQFTDEDWERLNKVIGYKEG 423

Query: 516  DDGQSPVNSKADVMHTFLVVHMNHNASKLIGEAQDLVAELSCEDLSCSVKLYPETKVFDI 575
            D+     N+K D +HTFL V M  +ASKL    ++ +AELSCE L+CSVKL+PETK+ DI
Sbjct: 424  DEQSIINNAKPDALHTFLEVQMKRSASKLYDGEKECLAELSCEGLNCSVKLFPETKIADI 483

Query: 576  KLGSYQLSSPKGLLAESAASFDSLVGVFKYKPFDDKVDWSMVAKASPCYMTYMKDSINQI 635
            KLG Y+LSSP GLLAE                                   Y+KDSI+ I
Sbjct: 484  KLGRYRLSSPSGLLAE-----------------------------------YLKDSIDGI 508

Query: 636  VKFFETNATVSQTIALETAAAVQLKIDEVKRTAQQQMNRALKDHARFSLDL-DIAAPKIT 694
            V FFE++  VSQTIALETAAAVQ   D+ K    ++M+  L    +F L L D++A    
Sbjct: 509  VNFFESSTAVSQTIALETAAAVQ---DDYKHELTEEMDMYL----QFDLVLSDVSA---- 557

Query: 695  IPTDFYPDNTHATKLLLDLGNLMIRTQDDSRQESAEDNMYLRFDLVLSDVSAFLFDGDYH 754
                          LL+D G+   +     R  S+     + F                 
Sbjct: 558  --------------LLVD-GDYSWKQLSSKRASSSGRESSVTF----------------- 585

Query: 755  WSEISVNKLTHSTNTSFFPIIDRCGVILQLQQILLETPYYPSTRLAVRLPSLAFHFSPAR 814
                              P+ID+CGV+L+LQQI    P YPSTRLAVRLPSL FHFSPAR
Sbjct: 586  -----------------LPVIDKCGVLLKLQQIRRPNPAYPSTRLAVRLPSLGFHFSPAR 628

Query: 815  YHRLMHVIKIFEEGDDGSSEFLRPWNQADLEGWLSLLTWK------------VMVSFICA 862
            YHRLM V +IF+  DD SS+ LRPW +AD EGWLS+L+WK            ++  FI  
Sbjct: 629  YHRLMQVAQIFQTKDDESSQILRPWEEADFEGWLSILSWKGREASWQRRYLCLVGPFIYV 688

Query: 863  SLTIGGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKI-TLLEAGDHILSMFDKRITAFAD 921
              + G  +  ++ +     + +  V L  G++ ++ I       + ++   +  I  F  
Sbjct: 689  LESPGSKSYKKYTSLRGKHIYKVPVELAGGVEHVLSIRNASRISEKVMEDVNALILMFDS 748

Query: 922  DKFQRDGIDVKTGSVV-VKSTDPISGLSETSSDHDDIESELDNQGVIDVAISERLFVTGV 980
            +  ++       G+V     + PI+GLS+TSSD +  ESE + +   D++  E ++VTGV
Sbjct: 749  EDSRKTWHSRLQGAVYRASGSAPIAGLSDTSSDSE--ESETEQKDGFDLSNLESVYVTGV 806

Query: 981  LDELKVCFSYSYQPDQSLMKVLLNQEKRLFEFRAIGG----------------------- 1017
            LDELK+CFSY +Q D S M VLL +E +LFEFRA+GG                       
Sbjct: 807  LDELKICFSYGHQDDASFMAVLLARESKLFEFRALGGKVRWWYASKLSFCHFLFFLLKVC 866

Query: 1018 -----QVEVSMKDNDIFIGTILKSLEVEDLVCYSQPSQPRYLARSFIGAADEKSLFYDTM 1072
                 QVEVSM+ +D+FIGT+LKSLE+EDL     PS                  F D  
Sbjct: 867  LPLTNQVEVSMRGSDMFIGTVLKSLEIEDLSSEMLPS------------------FEDAE 908

Query: 1073 RENVESSGLIPTESDDKFYEAPETLADSDVYMQSPGGTSEYPSSSSNEIKFNYSSLEPPK 1132
              + E      +E ++KFYEAPE L DS                       +Y+SL  P 
Sbjct: 909  SRSPERLDPTSSEGEEKFYEAPEILVDS----------------------IDYTSLRTPS 946

Query: 1133 FSRIIGLLPTDAPSTSTKEHELNDTLESFVKAQIIIYDQNSTRYNNIDKQVIVTLATLTF 1192
            FSRI GLLP D  + +   +E  ++L+SFVKAQI+IY Q S +Y NID QV+VTLATL+F
Sbjct: 947  FSRIDGLLPVDNKNITKPSNETTESLDSFVKAQIVIYHQTSPQYKNIDNQVMVTLATLSF 1006

Query: 1193 FCRRPTILAIMEFINSINIENGNLATSSDSSSTSMVKNDLSNDLDVLHVTTVEEHAVKGL 1252
            FCRRPTILAI+EF+N+IN+E+ +  +  D+S  +        D          + AVKGL
Sbjct: 1007 FCRRPTILAILEFVNAINVEDPSCESFEDNSPVAGEHTSPRRD----GFEDSRDAAVKGL 1062

Query: 1253 LGKGKSRVMFSLTLKMAQAQILLMKENETKLACLSQESLLAEIKVFPSSFSIKAALGN-L 1311
            LGKGKSR++F+L L MA+AQI LM EN TK A LSQ++LL +IKV   SF  ++ L   L
Sbjct: 1063 LGKGKSRIIFNLELNMARAQIFLMNENGTKFATLSQDNLLTDIKV---SFRTRSVLRQVL 1119

Query: 1312 KISDDSLSSSH---------------------------FYYWACDMRNPGGRSFVELEFT 1344
            +I +  +++S                            F++  C MR       + L FT
Sbjct: 1120 EIYESVMTASQTTICTFGSVICETLEELLLLRYWLFVSFHFSLCGMRMDCVDE-IHLVFT 1178

Query: 1345 SFSCDDEDYEGYDFSLFGELSEVRIVYLNRFLQEIVGYFMGLVPNSPRSVVKVTDQVTNS 1404
            SFS  DEDYEG+D+ L G+ SEVRIVYLNRF+QE+  YFMGLVP+  + VVK+ DQ+T+S
Sbjct: 1179 SFSIIDEDYEGFDYCLSGQFSEVRIVYLNRFIQEVAEYFMGLVPSDSKGVVKMKDQITDS 1238

Query: 1405 EKWFSASDIEGSPAVKFDLSLRKPIILMPRNRDSLDFLRLDIVHITVRNTFQWIGGSKSE 1464
            EKWF+ S+IEGSPA+K DLSL+KPII+MPR+ DS D+L+LDIVHITV NTFQW  G K+E
Sbjct: 1239 EKWFTTSEIEGSPALKLDLSLKKPIIVMPRHTDSPDYLKLDIVHITVDNTFQWFAGDKNE 1298

Query: 1465 INAVHLETLMVQVEDI 1480
            +NAVH+ET+ + V  +
Sbjct: 1299 LNAVHVETMKIMVRTL 1314


>At1g48090 unknown protein
          Length = 4099

 Score =  487 bits (1254), Expect = e-137
 Identities = 308/933 (33%), Positives = 490/933 (52%), Gaps = 142/933 (15%)

Query: 5   QVAYLLQRYLGNYVRGLNKEALKISVWKGDVELKNMQLKPEALNALKLPVKVKAGFLGSV 64
           +V +LL+RYLG YV GL+ EAL+ISVWKGDV LK+++LK EALN+LKLPV VK+GF+G++
Sbjct: 7   EVLHLLRRYLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTI 66

Query: 65  KLKVPWSRLGQDPVLVYLDRIFLLAEPAT-------------------------QVEGCS 99
            LKVPW  LG++PV+V +DR+F+LA PA                          Q +   
Sbjct: 67  TLKVPWKSLGKEPVIVLIDRVFVLAYPAPDDRTLKFFTLVGTEFAYTNYIPGGRQGKASR 126

Query: 100 EDAVQEAKKIRIEEMELKLWE-KSQQLKSEMKT-INPSSQGSA--KKLFSTIIGNLKLSI 155
             A  +        MEL  +E ++  L++  K+ +    QG++    + +TIIGNLK+SI
Sbjct: 127 NQASADRGTSYFWLMELHGYEAETATLEARAKSKLGSPPQGNSWLGSIIATIIGNLKVSI 186

Query: 156 SNIHIRYEDG-------------------ESNPGHPFAAGVMLDKLSAVTVDDTGKETFI 196
           SN+HIRYED                     SNPGHPFAAG+ L KL+AVT+D+ G ETF 
Sbjct: 187 SNVHIRYEDSTRDSSEILASFFSYFNNICSSNPGHPFAAGITLAKLAAVTMDEEGNETFD 246

Query: 197 TGGALDLIQKLSSMDLFAYQRITKNINSFLNCKMRIVKQPLNPKSLSCWSVELDRLAVYL 256
           T GALD ++K                                       S++L+RLA+Y 
Sbjct: 247 TSGALDKLRK---------------------------------------SLQLERLALYH 267

Query: 257 DSDIIPWHASKEWEDLLPSEWFQIFKFGTKDG---KPADRLLQKHSYVLEPVTGKGNYSK 313
           DS+  PW   K+W+++ P EW ++F+ G K+    K   +      Y+L P+ G   Y +
Sbjct: 268 DSNSFPWEIEKQWDNITPEEWIEMFEDGIKEQTEHKIKSKWALNRHYLLSPINGSLKYHR 327

Query: 314 LLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHFRPPVPV 373
           L   E  + + P ++A V L+DV ++++++ Y D +KL +  + +   ++ +H RP VPV
Sbjct: 328 LGNQERNNPEIPFERASVILNDVNVTITEEQYHDWIKLVEVVSRYKTYIEISHLRPMVPV 387

Query: 374 KADPRSWWKYAYRAVSDQMKKASGKMSWEQVLRYTSLRKRYIYLYASLLKSDPSQVTISG 433
              PR WW++A +A   Q +           L YT    RYI LYA+ L+    Q +   
Sbjct: 388 SEAPRLWWRFAAQASLQQKR-----------LWYT----RYIQLYANFLQ----QSSDVN 428

Query: 434 NKEIEDLDHELDIELILQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFGWTGKS---PK 490
             E+ +++ +LD ++IL WR+LAH  VE       + +++     W+SF W  ++   P+
Sbjct: 429 YPEMREIEKDLDSKVILLWRLLAHAKVESVKSKEAAEQRKLKKGGWFSFNWRTEAEDDPE 488

Query: 491 EDSE-------ELSFSEEDWNRLNKIIGYKEGDDGQSPVNSKADVMHTFLV-VHMNHNAS 542
            DS        E   ++++W  +NK++ ++  ++           M  FLV V +   A+
Sbjct: 489 VDSVAGGSKLMEERLTKDEWKAINKLLSHQPDEEMNLYSGKDMQNMTHFLVTVSIGQGAA 548

Query: 543 KLIGEAQDLVAELSCEDLSCSVKLYPETKVFDIKLGSYQLSSPKGLLAESAAS---FDSL 599
           +++   Q  V     E L  + K    +   D+ L  Y LS+P+G LA+S +S    ++L
Sbjct: 549 RIVDINQTEVLCGRFEQLDVTTKFRHRSTQCDVSLRFYGLSAPEGSLAQSVSSERKTNAL 608

Query: 600 VGVFKYKPFDDKVDWSMVAKASPCYMTYMKDSINQIVKFFETNATVSQTIALETAAAVQL 659
           +  F   P  + +DW + A  SPC+ T   +S +++++F + +  VS T+ALETAA +Q+
Sbjct: 609 MASFVNAPIGENIDWRLSATISPCHATIWTESYDRVLEFVKRSNAVSPTVALETAAVLQM 668

Query: 660 KIDEVKRTAQQQMNRALKDHARFSLDLDIAAPKITIPTDFYPDNTHATKLLLDLGNLMIR 719
           K++EV R AQ+Q+   L++ +RF+LD+DI APK+ IP      +  ++  LLD GN  + 
Sbjct: 669 KLEEVTRRAQEQLQIVLEEQSRFALDIDIDAPKVRIPLRASGSSKCSSHFLLDFGNFTLT 728

Query: 720 TQDDSRQESAEDNMYLRFDLVLSDVSAFLFD--GDYHWSEISVNKLTHSTNTS------- 770
           T  D+R E    N+Y RF +   D++AF  D   D     + +   T+    S       
Sbjct: 729 TM-DTRSEEQRQNLYSRFCISGRDIAAFFTDCGSDNQGCSLVMEDFTNQPILSPILEKAD 787

Query: 771 -FFPIIDRCGVILQLQQILLETPYYPSTRLAVRLPSLAFHFSPARYHRLMHVIKIF---- 825
             + +IDRCG+ + + QI +  P YPSTR+++++P++  HFSP RY R+M +  I     
Sbjct: 788 NVYSLIDRCGMAVIVDQIKVPHPSYPSTRISIQVPNIGVHFSPTRYMRIMQLFDILYGAM 847

Query: 826 ----EEGDDGSSEFLRPWNQADLEGWLSLLTWK 854
               +   D   + ++PW+  DL     +L WK
Sbjct: 848 KTYSQAPVDHMPDGIQPWSPTDLASDARILVWK 880



 Score =  308 bits (788), Expect = 2e-83
 Identities = 219/724 (30%), Positives = 354/724 (48%), Gaps = 102/724 (14%)

Query: 939  KSTDPISG--LSETSS-DHDDIESELDNQGVIDVAISERLFVTGVLDELKVCF--SYSYQ 993
            +++ P+SG  L +TS  D D  E +  N    D      L +TG L E K+        +
Sbjct: 979  QASAPLSGDVLGQTSDGDGDFHEPQTRNMKAAD------LVITGALVETKLYLYGKIKNE 1032

Query: 994  PDQSLMKVLLNQEKRLFEFRAIGGQVEVSMKDNDIFIGTILKSLEVEDLVCYSQPSQPRY 1053
             D+ + +VLL       +  A GG+V +   ++ + + T L SL+++D +   Q    +Y
Sbjct: 1033 CDEQVEEVLL------LKVLASGGKVHLISSESGLTVRTKLHSLKIKDELQQQQSGSAQY 1086

Query: 1054 LARSF---------------------IGAADEKSLFYDTMRENVESSGLIPTE--SDDKF 1090
            LA S                      +G AD++  + D + E      L PTE  + D  
Sbjct: 1087 LAYSVLKNEDIQESLGTCDSFDKEMPVGHADDEDAYTDALPE-----FLSPTEPGTPDMD 1141

Query: 1091 YEAPETLADSDVYM---QSPGGTSEYPSSSSNEIKFNYSSLEPPKFSRIIGLLPTDAPST 1147
                  + DSD ++    + GG  E  +S    +                     D    
Sbjct: 1142 MIQCSMMMDSDEHVGLEDTEGGFHEKDTSQGKSL--------------------CDEVFY 1181

Query: 1148 STKEHELNDTLESFVKAQIIIYDQNSTRYNNIDKQVIVTLATLTFFCRRPTILAIMEFIN 1207
              +  E +D    FV    +    +S  YN ID Q+ + ++ L FFC RPT++A++ F  
Sbjct: 1182 EVQGGEFSD----FVSVVFLTRSSSSHDYNGIDTQMSIRMSKLEFFCSRPTVVALIGF-- 1235

Query: 1208 SINIENGNLATSSDSSSTSMVKND------LSNDLDVLHVTTVEEHAVKGLLGKGKSRVM 1261
                         D S+ S ++ND      +    D    T  E   ++GLLG GK RV+
Sbjct: 1236 -----------GFDLSTASYIENDKDANTLVPEKSDSEKETNDESGRIEGLLGYGKDRVV 1284

Query: 1262 FSLTLKMAQAQILLMKENETKLACLSQESLLAEIKVFPSSFSIKAALGNLKISDDSLSSS 1321
            F L + +    + L KE+ ++LA   QE  + +IKV PSS S++  LGN K+ D SL S 
Sbjct: 1285 FYLNMNVDNVTVFLNKEDGSQLAMFVQERFVLDIKVHPSSLSVEGTLGNFKLCDKSLDSG 1344

Query: 1322 HFYYWACDMRNPGGRSFVELEFTSFSCDDEDYEGYDFSLFGELSEVRIVYLNRFLQEIVG 1381
            + + W CD+R+PG  S ++ +F+S+S  D+DYEGYD+SL G+LS VRIV+L RF+QE+  
Sbjct: 1345 NCWSWLCDIRDPGVESLIKFKFSSYSAGDDDYEGYDYSLSGKLSAVRIVFLYRFVQEVTA 1404

Query: 1382 YFMGLVPNSPRSVVKVTDQVTNSEKWFSASDIEGSPAVKFDLSLRKPIILMPRNRDSLDF 1441
            YFMGL       V+K+ D+V   E      +++G+ AVK DLSL  PII++PR+  S D+
Sbjct: 1405 YFMGLATPHSEEVIKLVDKVGGFEWLIQKDEMDGATAVKLDLSLDTPIIVVPRDSLSKDY 1464

Query: 1442 LRLDIVHITVRNTFQWIGGSKSEINAVHLETLMVQVEDINLNVGTGTDLGESIIKDVNGL 1501
            ++LD+  + V N   W G  + +  AV ++ L  ++  +N++VG    +G+ +I++  GL
Sbjct: 1465 IQLDLGQLEVSNEISWHGCPEKDATAVRVDVLHAKILGLNMSVGINGSIGKPMIREGQGL 1524

Query: 1502 SVIIHRSLRDLSHQFPSIEIIIKMEELKAAMSNKEYQIITECAVSNFSEVPDIPSPLNQY 1561
             + + RSLRD+  + P++ + +K++ L A MS+KEY II  C   N  E P +P      
Sbjct: 1525 DIFVRRSLRDVFKKVPTLSVEVKIDFLHAVMSDKEYDIIVSCTSMNLFEEPKLP------ 1578

Query: 1562 SSKTLNGATDDIVPEVTSGADSVTTD---VEASVLLKIWVSINLVELSLYTGISRDASLA 1618
                  G++     ++   AD V  +   + +  +  + V IN   L L   ++ ++SLA
Sbjct: 1579 --PDFRGSSSGPKAKMRLLADKVNLNSQMIMSRTVTILAVDINYALLELRNSVNEESSLA 1636

Query: 1619 TVQV 1622
             V V
Sbjct: 1637 HVAV 1640


>At4g17130 hypothetical protein
          Length = 747

 Score =  142 bits (357), Expect = 2e-33
 Identities = 76/144 (52%), Positives = 101/144 (69%), Gaps = 2/144 (1%)

Query: 1479 DINLNVGTGTDLGESIIKDVNGLSVIIHRSLRDLSHQFPSIEIIIKMEELKAAMSNKEYQ 1538
            DINLNVG+G ++GESII+DV G+SV I+RSLRDL HQ PSIE+ I+++EL+AA+SN+EYQ
Sbjct: 2    DINLNVGSGAEIGESIIQDVKGVSVTINRSLRDLLHQIPSIEVSIEIDELRAALSNREYQ 61

Query: 1539 IITECAVSNFSEVPDIPSPLNQYSSKTLNGATDDIVPEVTSGADSVTTDVEASVLLKIWV 1598
            I+TECA SN SE+P    PL+     +     + +  E T+ A +  TD   S  +K+ V
Sbjct: 62   ILTECAQSNISELPHAVPPLSGDVVTSSRNLHETLTSEDTNAAQTEKTDTWIS--MKVSV 119

Query: 1599 SINLVELSLYTGISRDASLATVQV 1622
             INLVEL LY G +RD  LA VQ+
Sbjct: 120  VINLVELCLYAGTARDTPLAAVQI 143


>At4g21490 NADH dehydrogenase like protein
          Length = 478

 Score =  125 bits (315), Expect = 2e-28
 Identities = 69/123 (56%), Positives = 86/123 (69%), Gaps = 4/123 (3%)

Query: 820 HVIKIFEEGDDGSSEFLRPWNQADLEGWLSLLTWKVMVSFICASLTIGGPTGVEFAASLH 879
           H +K  E+     S  +  + +A L G L+    K M+ F+      GGPTGVEFA+ LH
Sbjct: 173 HFLKEVEDAQRIRSTVIDSFEKASLPG-LNEQERKRMLHFVVVG---GGPTGVEFASELH 228

Query: 880 DFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQRDGIDVKTGSVVVK 939
           DFVNEDLV+LYP  K++V+ITLLEA DHIL+MFDKRIT FA++KF RDGIDVK GS+VVK
Sbjct: 229 DFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDKRITEFAEEKFTRDGIDVKLGSMVVK 288

Query: 940 STD 942
             D
Sbjct: 289 VND 291


>At2g20800 putative NADH-ubiquinone oxireductase
          Length = 582

 Score =  117 bits (292), Expect = 7e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%), Gaps = 1/80 (1%)

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEF+A LHDF+ +D+ ++YP +++  KITLLEAGDHIL+MFDKRITAFA++KFQR
Sbjct: 234 GGPTGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQR 293

Query: 927 DGIDVKTGSVVVKST-DPIS 945
           DGID+KTGS+VV  T D IS
Sbjct: 294 DGIDLKTGSMVVGVTADEIS 313


>At4g05020 unknown protein
          Length = 582

 Score =  114 bits (286), Expect = 4e-25
 Identities = 56/73 (76%), Positives = 61/73 (82%)

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEFAA LHDFV EDLV LYP  K  V+ITLLEA DHIL+MFDKRIT FA++KF R
Sbjct: 230 GGPTGVEFAAELHDFVTEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSR 289

Query: 927 DGIDVKTGSVVVK 939
           DGIDVK GS+V K
Sbjct: 290 DGIDVKLGSMVTK 302


>At4g28220 putative NADH dehydrogenase
          Length = 571

 Score =  110 bits (274), Expect = 9e-24
 Identities = 48/76 (63%), Positives = 65/76 (85%)

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEFAA LHDF+ ED+ ++YP +K++VKITL+++GDHIL+ FD+RI++FA+ KF R
Sbjct: 222 GGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTR 281

Query: 927 DGIDVKTGSVVVKSTD 942
           DGIDV+TG  V+  TD
Sbjct: 282 DGIDVQTGMRVMSVTD 297


>At5g24740 VPS13 - like protein
          Length = 3306

 Score = 89.4 bits (220), Expect = 2e-17
 Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 5/112 (4%)

Query: 9   LLQRYLGNYVRGLNKEALKISVWKGDVELKNMQLKPEALNALKLPVKVKAGFLGSVKLKV 68
           LL  YLG Y++ + K+ LKIS+W G+V L+N++L PEA   L+LP+ +K G +G + +K+
Sbjct: 12  LLLGYLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKI 71

Query: 69  PWSRLGQDPVLVYLDRIFLLAEPATQVEGCSEDAVQE----AKKIRIEEMEL 116
           PW +L +DPV + ++ +F+ A      E  S D V++     KK ++   EL
Sbjct: 72  PWKKLHRDPVTIMIEDVFICASQRNDQE-WSSDVVEKREFAGKKAKLASAEL 122



 Score = 47.0 bits (110), Expect = 9e-05
 Identities = 115/602 (19%), Positives = 214/602 (35%), Gaps = 81/602 (13%)

Query: 282 KFGTKDGKPADRLLQKHSYVLEPVTGKGNYSKLLLNEVADSKQ-----PLQKAVVNLDDV 336
           +F  K  K A   L K S  +    G  +Y   +  +V  S +     P       L DV
Sbjct: 109 EFAGKKAKLASAELAKLSRRVFDNPGGNSYMSYITAKVNRSGELYDDLPQYSISAELTDV 168

Query: 337 TISLSKDGYRDIMKLADNFAAFNQRLKYAHFRP-PVPVKADP----RSWWKYAYRAVSDQ 391
            ++L++   + I+ L D       R +Y  +RP    +   P    + WW YA  +V   
Sbjct: 169 VVTLNEFQLQQILILLDYLQTSQLRERYGRYRPCSTSLSRKPPGWQKLWWHYAQNSVLSD 228

Query: 392 MKKASGKMSWEQVLRYTSLRKRYIYLYASLLKSDPSQVTISGNKEIEDLDHELDIELILQ 451
               S ++  E++ + + +     Y  A+               E+++   EL + +   
Sbjct: 229 SIDKSIRLGLEELEKKSDIDDILSYRSAA-------------EGEMQEACSELTVNMGAT 275

Query: 452 WRMLAHKFVEQSA---EPN--LSVRKQKAGNSWWSFGWTGKSPKEDSEELS--FSEE--- 501
               + K  EQSA   EP+   ++ K +   +W S G  G    EDS + S   S+E   
Sbjct: 276 GATRSEK--EQSAPEKEPSDDPTLNKSRGWLNWLSRGMLGAGGTEDSSQFSGVVSDEVVK 333

Query: 502 DWNRLNKIIGYKEGDDGQSPVNSKADVMHTFLVVHMNHNASKLIGEAQDLVAELSCEDLS 561
           D ++  K           S             V   +     + G +  ++ EL    + 
Sbjct: 334 DIHKATKFYPLSSSPRNTSATGKICTCSIRLNVRKFSATLQHISGSSSQVITELDILGVI 393

Query: 562 CSVKLYPETKVFDIKLGSYQLSSP---KGLLA-----------ESAASFDSLVGVFKYKP 607
              K + ++    + + S +L  P   K +L            E+  S+ + + + K   
Sbjct: 394 VECKSWKDSTAMILSVISGRLVYPHNGKEILTMKRVCSQSDTLETKPSYGARLELSK--- 450

Query: 608 FDDKVDWSMVAKASPCYMTYMKDSINQIVKFF--------ETNATVSQTIALETAAAVQL 659
            D  V  S+ A   P    Y    I  +  FF        +    +S    LE+   +  
Sbjct: 451 -DHDVALSLKATLQPLEAAYDGGFILAVSNFFSGSRYFKLQHERILSSLNGLESETRLAA 509

Query: 660 KIDEVKRTAQQQMNRALKDHARFSLDLDIAAPKITIPTDFYPDNTHATKLLLDLGNLMIR 719
           K + +           L    +   DLDI    ++ P       ++   L+L+  ++   
Sbjct: 510 KAEYL-----------LSSRNKVKWDLDIKDLTLSFPGRLVESESYNLVLVLESLSITSS 558

Query: 720 TQDD----SRQESAEDNMYLRFDLVLSDVSAFLFDGDYHWSEISV----NKLTHSTNTSF 771
           + D      R +S  D++       +  + AF     Y   +I +     KL        
Sbjct: 559 STDALSQIPRLQSDVDHVVNSLQSSVEALDAFQVKDLYDHFDIKICNLEMKLMKIHPFQE 618

Query: 772 FPIIDRCGVILQLQQ-ILLETPYYPSTRLAVRLPSLAFHFSPARYHRLMHVIKIFEEGDD 830
            P++++  ++++    I+ E        +   LP    HFSP+ +  +M VI+  +  D 
Sbjct: 619 LPLVEKSSLLIKFASCIIPEESILKQLEVEATLPMFNVHFSPSIFKGVMSVIEYLDIQDH 678

Query: 831 GS 832
           G+
Sbjct: 679 GT 680


>At1g07180 unknown protein
          Length = 510

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEF+  L DF+ +D+ + Y  +KD +++TL+EA D ILS FD R+  +A  +  +
Sbjct: 249 GGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARD-ILSSFDDRLRHYAIKQLNK 307

Query: 927 DGIDVKTGSVVVKSTDP 943
            G+ +  G  +VK   P
Sbjct: 308 SGVKLVRG--IVKEVKP 322


>At2g29990 putative NADH dehydrogenase (ubiquinone oxidoreductase)
          Length = 508

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEF+  L DF+ +D+ + Y  +KD + +TL+EA D ILS FD R+  +A  +  +
Sbjct: 247 GGPTGVEFSGELSDFIMKDVRQRYAHVKDDIHVTLIEARD-ILSSFDDRLRRYAIKQLNK 305

Query: 927 DGIDVKTGSV 936
            G+    G V
Sbjct: 306 SGVRFVRGIV 315


>At3g19190 hypothetical protein
          Length = 1814

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 6   VAYLLQRYLGNYVRG-LNKEALKISVWKGDVELKNMQLKPEALN-ALKLPVKVKAGFLGS 63
           V +LL++ LG  + G ++ + L I +  G ++L ++ +  + LN     P+ +K G +GS
Sbjct: 24  VKFLLKKKLGKLILGDIDLDQLDIQLRDGTIQLSDLAINVDYLNDKFDAPLVIKEGSIGS 83

Query: 64  VKLKVPWSRLGQDPVLVYLDRIFLLAEPATQVEGCSEDAVQEAKKIRIEEMELKL---WE 120
           + +K+PW   G     V +D + L+  P  +    S +    +   R +   ++L     
Sbjct: 84  LLVKMPWKTNG---CQVEVDELELVLAPRLESNKSSSNEASTSASTREDLHNIRLEIGKH 140

Query: 121 KSQQLKSEMKTINPSSQGSAK---KLFSTIIGNLKLSISNIHIRYE 163
           +++ L +  K+ +       K   K+    + +  + I N+ I ++
Sbjct: 141 ENEMLMNAAKSASIDVHEGVKTVAKIVKWFLTSFHVKIKNLIIAFD 186


>At2g14510 putative receptor-like protein kinase
          Length = 868

 Score = 34.3 bits (77), Expect = 0.61
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 1051 PRYLARSFIGAADEKSLFYDTMRENVESSGLIPTESDDKFYE---APETLADSDVY-MQS 1106
            P Y  ++++    +   F   + E++    +I  +S DK Y    A   LA+ D+  +  
Sbjct: 733  PEYYLKNWLTEKSDVYSFGIVLLESITGQPVIE-QSRDKSYIVEWAKSMLANGDIESIMD 791

Query: 1107 PGGTSEYPSSSSNEIKFNYSSLEPPKFSRIIGLLPTDAPSTSTKEHELNDTLESFVKAQI 1166
            P    +Y SSSS      + +LE       I    T  P+ +   HELN+ LE +   +I
Sbjct: 792  PNLHQDYDSSSS------WKALELAMLC--INPSSTQRPNMTRVAHELNECLEIYNLTKI 843

Query: 1167 IIYDQNSTR 1175
               DQNS++
Sbjct: 844  RSQDQNSSK 852


>At2g36570 putative receptor-like protein kinase
          Length = 672

 Score = 33.5 bits (75), Expect = 1.0
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 1141 PTDAPSTSTKEHE-----LNDTLESFVKAQII--IYDQNSTRYNNIDKQVIVTLATLTFF 1193
            P  A S + +E E     L   + S VK +    ++D    RY NI+++++  L  +   
Sbjct: 565  PRSAASVAVEEEEEAVVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEEMVAML-HIGLA 623

Query: 1194 C------RRPTILAIMEFINSINIENGNLATSSDSSSTSM 1227
            C      +RPT+  +++ +  I +E   +    D S  SM
Sbjct: 624  CVVPQPEKRPTMAEVVKMVEEIRVEQSPVGEDFDESRNSM 663


>At3g53030 serine protein kinase - like
          Length = 529

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 878 LHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQRDGIDVKTGSVV 937
           LH ++N     + P +KD       E  D + +  +KR      +  +++ ++VK G+VV
Sbjct: 462 LHPWINSGPRSIKPSLKD-------ENSDKLDTEKNKR------ENEEQEAVEVKMGNVV 508

Query: 938 VKSTDPISGLSETSS 952
           + S D   G+S++SS
Sbjct: 509 ISSLDSKPGMSQSSS 523


>At3g28344 P-glycoprotein, 5' partial
          Length = 626

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 53/213 (24%), Positives = 84/213 (38%), Gaps = 22/213 (10%)

Query: 913  DKRITAFADDKFQRDGIDVKTGSVVVKSTDPISGLSETSSDHDDIESELDNQGVIDVAIS 972
            D  ITA A   F+   I V TG V+  +    + L++ S     + + LD    ID    
Sbjct: 319  DGYITAKA--LFETFMILVSTGRVIADAGSMTTDLAKGSDAVGSVFAVLDRYTSIDPEDP 376

Query: 973  ---ERLFVTGVLDELKVCFSYSYQPDQSLMKVLLNQEKRLFEFRAIGGQVEVSMKDNDIF 1029
               E   +TG ++ L V FSY  +PD  + K   N   ++ E ++    V  S       
Sbjct: 377  DGYETERITGQVEFLDVDFSYPTRPDVIIFK---NFSIKIEEGKSTA-IVGPSGSGKSTI 432

Query: 1030 IGTI---------LKSLEVEDLVCYSQPSQPRYLARSFIGAADEKSLFYDTMRENVESSG 1080
            IG I         +  ++  D+  Y   S  R++A      + E +LF  T+REN+   G
Sbjct: 433  IGLIERFYDPLKGIVKIDGRDIRSYHLRSLRRHIAL----VSQEPTLFAGTIRENIIYGG 488

Query: 1081 LIPTESDDKFYEAPETLADSDVYMQSPGGTSEY 1113
            +     + +  EA +     D       G   Y
Sbjct: 489  VSDKIDEAEIIEAAKAANAHDFITSLTEGYDTY 521


>At1g53090 phytochrome A supressor spa1, putative
          Length = 794

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 19/160 (11%)

Query: 913  DKRITAFADDKFQRDGIDVKTGSVVVKSTDPISGLSETSSDHDDIESELDNQGVIDV-AI 971
            +K+I  F  +   +DG D+    V + S   +SG+   S     + S  + +GV+ V  +
Sbjct: 505  NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASS-NFEGVVQVWDV 563

Query: 972  SERLFVTGVLDELKVCFSYSYQPDQSLMKVLLNQEKRLFEFRAIGGQVEVSMKDNDIFIG 1031
            +    VT + +  K  +S  Y           + +  L    +  G V++   +  + IG
Sbjct: 564  ARNQLVTEMKEHEKRVWSIDYS----------SADPTLLASGSDDGSVKLWSINQGVSIG 613

Query: 1032 TILKSLEVEDLVCYSQPSQP-RYLARSFIGAADEKSLFYD 1070
            TI       ++ C   PS+  R LA    G+AD K  +YD
Sbjct: 614  TIKTK---ANICCVQFPSETGRSLA---FGSADHKVYYYD 647


>At4g33400 Dem -like protein
          Length = 645

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 25/128 (19%)

Query: 995  DQSLMKVLLNQEKRLFEFRAIGGQVEVSMKDNDIFIGTILKSL-EVEDLVCYSQPSQPRY 1053
            D+  +K   +Q +  F  +A+      S +D  +F+ +    L E    V +++ ++ + 
Sbjct: 154  DEMQLKAYKDQRRVDFVAKAVWAMKFASSEDFSVFVSSYNNCLFENNHGVEFNEANKAKI 213

Query: 1054 LARSFIGAADEKSLFYDTMRENVESSGLIPTESDDKFYEAPETLADSDVYMQSPGGTSEY 1113
              + FIG A+                   P  +DD  +E  +     D+ +QSPGG S  
Sbjct: 214  YGKDFIGWAN-------------------PEAADDSMWEDAD-----DILLQSPGGGSAT 249

Query: 1114 PSSSSNEI 1121
            P+  + ++
Sbjct: 250  PARDTQDL 257


>At5g10280 putative transcription factor MYB92
          Length = 334

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 1071 TMRENVESSGLIPTESDD---KFYEAPETLADSDVYMQSPGGTSEYPSSSSNEIKFNYSS 1127
            T+  N+E S + P   DD   KF    E L  S +++  P  T+  P+  ++++ FN   
Sbjct: 239  TLNSNMEPSSVFPQNLDDNHFKFSTQRENLPVSPIWLSDPSSTT--PAHVNDDLIFNQYG 296

Query: 1128 LEP--PKFSRIIGLLPTDAPSTSTKEHELNDTLES 1160
            +E      +   G     + S +  +H L+D++ S
Sbjct: 297  IEDVNSNITSSSGQESGASASAAWPDHLLDDSIFS 331


>At5g55760 transcription regulator Sir2-like protein
          Length = 473

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 5/103 (4%)

Query: 1517 PSIEIIIKMEEL-KAAMSNKEYQIITECAVSNFSEVPDIPSPLN----QYSSKTLNGATD 1571
            PS  +  K+EEL K    +K   + T   +S    +PD   P      Q   K L  A+ 
Sbjct: 26   PSHLLQCKIEELAKLIQKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKDLPKASL 85

Query: 1572 DIVPEVTSGADSVTTDVEASVLLKIWVSINLVELSLYTGISRD 1614
                 + S       ++E + +LK  +S N+  L L +GI R+
Sbjct: 86   PFHRAMPSMTHMALVELERAGILKFVISQNVDGLHLRSGIPRE 128


>At5g02390 putative protein
          Length = 835

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 487 KSPKEDSEELSFSEEDWNRLNKIIGYKEGDDGQSPVNSKADVMHTFLVVHMNHN 540
           K  K D EE  F      ++    G+ E DD  SP  SKA  +    ++HMN N
Sbjct: 251 KKEKSDDEEAWFDP----KMRHTKGFSENDDDTSPRRSKA-CLDALNLIHMNRN 299


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,019,356
Number of Sequences: 26719
Number of extensions: 1596739
Number of successful extensions: 4514
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4458
Number of HSP's gapped (non-prelim): 54
length of query: 1631
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1518
effective length of database: 8,299,349
effective search space: 12598411782
effective search space used: 12598411782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)