
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0520.2
(280 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46800 carnitine/acylcarnitine translocase-like protein 230 6e-61
At2g33820 mitochondrial basic amino acid carrier (BAC1) 80 1e-15
At3g54110 uncoupling protein (ucp/PUMP) 62 4e-10
At1g79900 putative carnitine/acylcarnitine translocase 62 4e-10
At5g58970 uncoupling protein AtUCP2 54 7e-08
At1g25380 unknown protein 52 5e-07
At2g22500 putative mitochondrial dicarboxylate carrier protein 49 2e-06
At4g01100 putative carrier protein 48 7e-06
At1g14140 mitochondrial uncoupling protein - like 48 7e-06
At5g66380 unknown protein 47 1e-05
At4g26180 putative mitochondrial carrier protein 46 2e-05
At5g48970 mitochondrial carrier protein-like 45 6e-05
At1g34065 allinase like protein 44 1e-04
At1g14560 mitochondrial carrier like protein 42 3e-04
At5g01340 unknown protein 42 4e-04
At3g55640 Ca-dependent solute carrier - like protein 41 6e-04
At3g21390 unknown protein 41 6e-04
At4g32400 adenylate translocator (brittle-1) - like protein 41 8e-04
At5g09470 mitochondrial carrier-like protein 40 0.001
At3g53940 unknown protein 40 0.001
>At5g46800 carnitine/acylcarnitine translocase-like protein
Length = 300
Score = 230 bits (587), Expect = 6e-61
Identities = 152/312 (48%), Positives = 183/312 (57%), Gaps = 47/312 (15%)
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
M D KDL +GTV GAAQL+VGHPFDTIKVKLQSQPTP PGQLPRY+GAIDAVKQT+A+E
Sbjct: 1 MADAWKDLASGTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASE 60
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSH------------PGAGAGLAVSF 108
G +GLYKG GAPLATVAAFNA LFTVRGQME L RS GAGAG AVSF
Sbjct: 61 GTKGLYKGMGAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSF 120
Query: 109 LVCPTELIKCRFH*WRFNCHVLVTFSVHSFYQL---M*ILSSLITNK---KNLTIKLVLV 162
L CPTELIKCR T SV + + M + ++ ++ + L L
Sbjct: 121 LACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPT 180
Query: 163 LQQPMP*NQIAKGTS*MNLSACLEILQQFI--------LKS*SVMVAEGLTVASFRFLVY 214
+ +P N + A E ++F+ L S+++A G+ ASF +VY
Sbjct: 181 FAREVPGN--------ATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVY 232
Query: 215 GTGVVKK*FK-------*MTREIQNFQVQLMLLEGF*PEGITGLYKGFGTAMFRSVPVNA 267
T VVK + T + F+ L EG+ GLYKGFG AM RSVP NA
Sbjct: 233 PTDVVKSVLQVDDYKNPRYTGSMDAFRKILK------SEGVKGLYKGFGPAMARSVPANA 286
Query: 268 ACFLAYKMTRSA 279
ACFLAY+MTRS+
Sbjct: 287 ACFLAYEMTRSS 298
>At2g33820 mitochondrial basic amino acid carrier (BAC1)
Length = 311
Score = 80.1 bits (196), Expect = 1e-15
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
K+ +AG + G A + VGHPFDT+KVKLQ T + G RY + + L EG +GL
Sbjct: 16 KEYVAGMMAGLATVAVGHPFDTVKVKLQKHNTDVQGL--RYKNGLHCASRILQTEGVKGL 73
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALFR-SHPGAG------------AGLAVSFLVCP 112
Y+G + +A ++ +F + Q + R + P G G +SF++CP
Sbjct: 74 YRGATSSFMGMAFESSLMFGIYSQAKLFLRGTLPDDGPRPEIIVPSAMFGGAIISFVLCP 133
Query: 113 TELIKCR 119
TEL+KCR
Sbjct: 134 TELVKCR 140
Score = 37.4 bits (85), Expect = 0.009
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 15 GAAQLIVGHPFDTIKVKLQSQPTP-IPGQLPRYSGAIDAVKQTLAAEGPRGLYKGRGAPL 73
GA V P + +K ++Q Q T + RY+ +D QT+ +G G+++G A L
Sbjct: 124 GAIISFVLCPTELVKCRMQIQGTDSLVPNFRRYNSPLDCAVQTVKNDGVTGIFRGGSATL 183
Query: 74 ATVAAFNAALFTV 86
NA FTV
Sbjct: 184 LRECTGNAVFFTV 196
Score = 29.3 bits (64), Expect = 2.5
Identities = 11/30 (36%), Positives = 18/30 (59%)
Query: 247 GITGLYKGFGTAMFRSVPVNAACFLAYKMT 276
G+ G Y G G + R+ P NAA +A++ +
Sbjct: 273 GLKGCYAGLGPTIVRAFPANAAAIVAWEFS 302
>At3g54110 uncoupling protein (ucp/PUMP)
Length = 306
Score = 61.6 bits (148), Expect = 4e-10
Identities = 42/133 (31%), Positives = 64/133 (47%), Gaps = 14/133 (10%)
Query: 1 MGDV--AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLA 58
+GDV +K ++AG GA ++V +P D +KV+LQ++ G RYSGA++A +
Sbjct: 109 VGDVPLSKKILAGLTTGALGIMVANPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVR 168
Query: 59 AEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAV 106
EG R L+ G G +A A NAA Q++ P G GAG
Sbjct: 169 QEGVRALWTGLGPNVARNAIINAAELASYDQVKETILKIPGFTDNVVTHILSGLGAGFFA 228
Query: 107 SFLVCPTELIKCR 119
+ P +++K R
Sbjct: 229 VCIGSPVDVVKSR 241
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/93 (24%), Positives = 40/93 (42%), Gaps = 7/93 (7%)
Query: 3 DVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGP 62
+V +++G G + +G P D +K ++ G Y G ID +TL ++GP
Sbjct: 213 NVVTHILSGLGAGFFAVCIGSPVDVVKSRMM-------GDSGAYKGTIDCFVKTLKSDGP 265
Query: 63 RGLYKGRGAPLATVAAFNAALFTVRGQMEALFR 95
YKG + ++N +F Q + R
Sbjct: 266 MAFYKGFIPNFGRLGSWNVIMFLTLEQAKKYVR 298
Score = 37.4 bits (85), Expect = 0.009
Identities = 20/47 (42%), Positives = 26/47 (54%), Gaps = 2/47 (4%)
Query: 24 PFDTIKVKLQSQPTPIPGQ--LPRYSGAIDAVKQTLAAEGPRGLYKG 68
P DT KV+LQ Q + + G LP+Y G + V EG R L+KG
Sbjct: 31 PLDTAKVRLQLQKSALAGDVTLPKYRGLLGTVGTIAREEGLRSLWKG 77
>At1g79900 putative carnitine/acylcarnitine translocase
Length = 296
Score = 61.6 bits (148), Expect = 4e-10
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 22/128 (17%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
++ +AG G A +I G+P DT++++ Q Q + A +++ LA EGP L
Sbjct: 14 REFVAGGFGGVAGIISGYPLDTLRIRQQ--------QSSKSGSAFSILRRMLAIEGPSSL 65
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALFRSH--------------PGAGAGLAVSFLVC 111
Y+G APLA+V NA +F + F S G G S L+
Sbjct: 66 YRGMAAPLASVTFQNAMVFQIYAIFSRSFDSSVPLVEPPSYRGVALGGVATGAVQSLLLT 125
Query: 112 PTELIKCR 119
P ELIK R
Sbjct: 126 PVELIKIR 133
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
L+AG + G A + +P D +K +LQ Y G D ++++ EG L++
Sbjct: 204 LVAGGLAGVASWVACYPLDVVKTRLQQGHGA-------YEGIADCFRKSVKQEGYTVLWR 256
Query: 68 GRGAPLATVAAFNAALFTV-RGQMEALFRSHP 98
G G +A N A+F + LF P
Sbjct: 257 GLGTAVARAFVVNGAIFAAYEVALRCLFNQSP 288
Score = 36.6 bits (83), Expect = 0.015
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
+ G GA Q ++ P + IK++LQ Q T SG I K L +G +GLY+G
Sbjct: 111 LGGVATGAVQSLLLTPVELIKIRLQLQQTK--------SGPITLAKSILRRQGLQGLYRG 162
Query: 69 RGAPLATVAAFNAALFTVRGQMEALFRSHPG-------------AGAGLA--VSFLVC-P 112
+ A + F + R HPG GLA S++ C P
Sbjct: 163 LTITVLRDAPAHGLYFWTYEYVRE--RLHPGCRKTGQENLRTMLVAGGLAGVASWVACYP 220
Query: 113 TELIKCR 119
+++K R
Sbjct: 221 LDVVKTR 227
Score = 33.1 bits (74), Expect = 0.17
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYKM 275
EG T L++G GTA+ R+ VN A F AY++
Sbjct: 249 EGYTVLWRGLGTAVARAFVVNGAIFAAYEV 278
>At5g58970 uncoupling protein AtUCP2
Length = 305
Score = 54.3 bits (129), Expect = 7e-08
Identities = 43/133 (32%), Positives = 64/133 (47%), Gaps = 14/133 (10%)
Query: 1 MGDVA--KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLA 58
+GD+ + ++A + GA +IV +P D +KV+LQS+ G RY+GA+DA +
Sbjct: 111 IGDIPLYQKILAALLTGAIAIIVANPTDLVKVRLQSEGKLPAGVPRRYAGAVDAYFTIVK 170
Query: 59 AEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP--------GAGAGLAVSFL- 109
EG L+ G G +A A NAA Q++ P AGLA F
Sbjct: 171 LEGVSALWTGLGPNIARNAIVNAAELASYDQIKETIMKIPFFRDSVLTHLLAGLAAGFFA 230
Query: 110 VC---PTELIKCR 119
VC P +++K R
Sbjct: 231 VCIGSPIDVVKSR 243
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
V L+AG G + +G P D +K ++ T Y +D +T+ EG
Sbjct: 216 VLTHLLAGLAAGFFAVCIGSPIDVVKSRMMGDST--------YRNTVDCFIKTMKTEGIM 267
Query: 64 GLYKGRGAPLATVAAFNAALFTVRGQMEALF 94
YKG + +NA +F Q++ +F
Sbjct: 268 AFYKGFLPNFTRLGTWNAIMFLTLEQVKKVF 298
Score = 36.6 bits (83), Expect = 0.015
Identities = 21/48 (43%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
Query: 24 PFDTIKVKLQSQ---PTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
P DT KV+LQ Q PT LP+Y G+I + EG GL+KG
Sbjct: 32 PLDTAKVRLQLQRKIPTGDGENLPKYRGSIGTLATIAREEGISGLWKG 79
>At1g25380 unknown protein
Length = 363
Score = 51.6 bits (122), Expect = 5e-07
Identities = 71/299 (23%), Positives = 116/299 (38%), Gaps = 39/299 (13%)
Query: 3 DVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTP-IPGQLPRYSGAIDAVKQTLAAEG 61
+VA + AG GA P D IK +LQ P P R I ++K + EG
Sbjct: 16 EVAANAGAGATAGAIAATFVCPLDVIKTRLQVLGLPEAPASGQRGGVIITSLKNIIKEEG 75
Query: 62 PRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHPG-----------AGAGLAVSFLV 110
RG+Y+G + + A F+V G+++ + +S G AGAG A S
Sbjct: 76 YRGMYRGLSPTIIALLPNWAVYFSVYGKLKDVLQSSDGKLSIGSNMIAAAGAGAATSIAT 135
Query: 111 CPTELIKCRFH*WRFNCHVLVTFSVHSFYQ-------LM*ILSSLITNKKNLTIKLVLVL 163
P ++K R V+ SV S + + + S ++ + ++ +
Sbjct: 136 NPLWVVKTRLMTQGIRPGVVPYKSVMSAFSRICHEEGVRGLYSGILPSLAGVSHVAIQFP 195
Query: 164 QQPMP*NQIAK--GTS*MNLSACLEILQQFILKS*SVMVAEGLTVASFRFLVYGTGVVKK 221
+AK TS NLS +V +A + L Y V++
Sbjct: 196 AYEKIKQYMAKMDNTSVENLSPG------------NVAIASSIAKVIASILTYPHEVIRA 243
Query: 222 *FK*MTREIQNFQVQL-----MLLEGF*PEGITGLYKGFGTAMFRSVPVNAACFLAYKM 275
+ +I+N + + + + F EGI GLY+G T + R+ P F Y+M
Sbjct: 244 KLQ-EQGQIRNAETKYSGVIDCITKVFRSEGIPGLYRGCATNLLRTTPSAVITFTTYEM 301
Score = 42.4 bits (98), Expect = 3e-04
Identities = 30/94 (31%), Positives = 42/94 (43%), Gaps = 4/94 (4%)
Query: 2 GDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEG 61
G+VA IA ++ I+ +P + I+ KLQ Q I +YSG ID + + +EG
Sbjct: 218 GNVA---IASSIAKVIASILTYPHEVIRAKLQEQGQ-IRNAETKYSGVIDCITKVFRSEG 273
Query: 62 PRGLYKGRGAPLATVAAFNAALFTVRGQMEALFR 95
GLY+G L FT M FR
Sbjct: 274 IPGLYRGCATNLLRTTPSAVITFTTYEMMLRFFR 307
>At2g22500 putative mitochondrial dicarboxylate carrier protein
Length = 313
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
A G + +P D IK ++ + + G P Y GA+D +T+ AEG LYKG
Sbjct: 225 ASFAAGFVASVASNPVDVIKTRVMNMKV-VAGVAPPYKGAVDCALKTVKAEGIMSLYKGF 283
Query: 70 GAPLATVAAFNAALFTVRGQMEALFRSH 97
++ A F LF Q++ LF+ +
Sbjct: 284 IPTVSRQAPFTVVLFVTLEQVKKLFKDY 311
Score = 42.0 bits (97), Expect = 4e-04
Identities = 34/131 (25%), Positives = 60/131 (44%), Gaps = 22/131 (16%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLP-----RYSGAIDAVKQTLAAE 60
K + AG + GA VG+P D V++Q+ G+LP Y +DA+ Q + E
Sbjct: 121 KKIGAGAIAGAIGAAVGNPADVAMVRMQAD-----GRLPLTDRRNYKSVLDAITQMIRGE 175
Query: 61 GPRGLYKGRGAPL--------ATVAAFNAALFTV--RGQMEALFRSHPGA--GAGLAVSF 108
G L++G + + +A++++ T+ +G ++ +H A AG S
Sbjct: 176 GVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVSASFAAGFVASV 235
Query: 109 LVCPTELIKCR 119
P ++IK R
Sbjct: 236 ASNPVDVIKTR 246
Score = 27.7 bits (60), Expect = 7.2
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 20/77 (25%)
Query: 15 GAAQLIVG---HPFDTIKVKLQSQPTPIPGQL-----------------PRYSGAIDAVK 54
G A ++ G HP D IKV++Q Q P Q P G I
Sbjct: 10 GIASIVAGCSTHPLDLIKVRMQLQGESAPIQTNLRPALAFQTSTTVNAPPLRVGVIGVGS 69
Query: 55 QTLAAEGPRGLYKGRGA 71
+ + EG R L+ G A
Sbjct: 70 RLIREEGMRALFSGVSA 86
>At4g01100 putative carrier protein
Length = 352
Score = 47.8 bits (112), Expect = 7e-06
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 23/135 (17%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+ K L AG V G P + +K+ LQ Q P + +YSG + +K EG R
Sbjct: 38 ICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN---PHNI-KYSGTVQGLKHIWRTEGLR 93
Query: 64 GLYKGRGAPLATVA------------AFNAALFTVR-------GQMEALFRSHPGAGAGL 104
GL+KG G A + A N L+ R Q+ L R GA AG+
Sbjct: 94 GLFKGNGTNCARIVPNSAVKFFSYEQASNGILYMYRQRTGNENAQLTPLLRLGAGATAGI 153
Query: 105 AVSFLVCPTELIKCR 119
P ++++ R
Sbjct: 154 IAMSATYPMDMVRGR 168
Score = 35.4 bits (80), Expect = 0.034
Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 3/59 (5%)
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
AG G + +P D ++ +L Q P Q Y G A+ L EGPR LY+G
Sbjct: 147 AGATAGIIAMSATYPMDMVRGRLTVQTANSPYQ---YRGIAHALATVLREEGPRALYRG 202
Score = 31.2 bits (69), Expect = 0.65
Identities = 20/75 (26%), Positives = 33/75 (43%), Gaps = 10/75 (13%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQ-----SQPTPIPGQ-----LPRYSGAIDAV 53
V L G + G + +P D I+ ++Q + G+ Y+G +DA
Sbjct: 244 VVTRLTCGAIAGTVGQTIAYPLDVIRRRMQMVGWKDASAIVTGEGRSTASLEYTGMVDAF 303
Query: 54 KQTLAAEGPRGLYKG 68
++T+ EG LYKG
Sbjct: 304 RKTVRHEGFGALYKG 318
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYK 274
EG+ GL+KG GT R VP +A F +Y+
Sbjct: 90 EGLRGLFKGNGTNCARIVPNSAVKFFSYE 118
>At1g14140 mitochondrial uncoupling protein - like
Length = 305
Score = 47.8 bits (112), Expect = 7e-06
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIP-GQLPRYSGAIDAVKQTLAAEGP 62
+A + G G +V P D +KV++Q+ + G PRYSG I+A + L +EG
Sbjct: 114 LATKALVGGFSGVIAQVVASPADLVKVRMQADGRLVSQGLKPRYSGPIEAFTKILQSEGV 173
Query: 63 RGLYKG-----RGAPLATVAAF----NAALFTVRGQM-EALFRSHPGAG--AGLAVSFLV 110
+GL+KG + A L + +A F + ++ E +H A +GLA + L
Sbjct: 174 KGLWKGVLPNIQRAFLVNMGELACYDHAKHFVIDKKIAEDNIFAHTLASIMSGLASTSLS 233
Query: 111 CPTELIKCR 119
CP +++K R
Sbjct: 234 CPADVVKTR 242
>At5g66380 unknown protein
Length = 308
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 17 AQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGRGAPLATV 76
A +++ +PF I+ +LQ +P+ +PRY ++ +++T EG RG Y+G A L
Sbjct: 225 AAVLLTYPFQVIRARLQQRPST--NGIPRYIDSLHVIRETARYEGLRGFYRGLTANLLKN 282
Query: 77 AAFNAALFTVRGQMEALFRSHP 98
++ F V + L + HP
Sbjct: 283 VPASSITFIVYENVLKLLKQHP 304
Score = 40.8 bits (94), Expect = 8e-04
Identities = 29/89 (32%), Positives = 43/89 (47%), Gaps = 3/89 (3%)
Query: 5 AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRG 64
A L + GA + +P +K +LQ Q TP+ P YSG +DA + + EGPR
Sbjct: 107 ALHLASAAEAGALVCLCTNPIWLVKTRLQLQ-TPLHQTQP-YSGLLDAFRTIVKEEGPRA 164
Query: 65 LYKGRGAPLATVAAFNAALFTVRGQMEAL 93
LYKG P + + A FT ++ +
Sbjct: 165 LYKGI-VPGLVLVSHGAIQFTAYEELRKI 192
Score = 32.0 bits (71), Expect = 0.38
Identities = 20/59 (33%), Positives = 24/59 (39%), Gaps = 1/59 (1%)
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
AG V G A + H D ++ + Q LP Y AV EG RGLY G
Sbjct: 12 AGAVAGFATVAAMHSLDVVRTRFQVNDGR-GSSLPTYKNTAHAVFTIARLEGLRGLYAG 69
Score = 28.1 bits (61), Expect = 5.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYK 274
EG+ G Y+G + ++VP ++ F+ Y+
Sbjct: 266 EGLRGFYRGLTANLLKNVPASSITFIVYE 294
>At4g26180 putative mitochondrial carrier protein
Length = 325
Score = 46.2 bits (108), Expect = 2e-05
Identities = 23/64 (35%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKL--QSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRG 64
DL+AG+ G ++ +P D ++ KL Q+Q IP + Y G +D +T G RG
Sbjct: 116 DLVAGSFAGGTAVLFTYPLDLVRTKLAYQTQVKAIPVEQIIYRGIVDCFSRTYRESGARG 175
Query: 65 LYKG 68
LY+G
Sbjct: 176 LYRG 179
Score = 36.6 bits (83), Expect = 0.015
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 5 AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRG 64
AK+LIAG V G P + IK+ Q++ + G + ++ + EG G
Sbjct: 18 AKELIAGGVTGGIAKTAVAPLERIKILFQTRRDEF-----KRIGLVGSINKIGKTEGLMG 72
Query: 65 LYKGRGAPLATVAAFNA 81
Y+G GA +A + + A
Sbjct: 73 FYRGNGASVARIVPYAA 89
Score = 29.6 bits (65), Expect = 1.9
Identities = 13/32 (40%), Positives = 20/32 (61%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYKMTR 277
EG+ G Y+G G ++ R VP A ++AY+ R
Sbjct: 68 EGLMGFYRGNGASVARIVPYAALHYMAYEEYR 99
>At5g48970 mitochondrial carrier protein-like
Length = 339
Score = 44.7 bits (104), Expect = 6e-05
Identities = 28/95 (29%), Positives = 43/95 (44%), Gaps = 9/95 (9%)
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTP------IPGQLP---RYSGAIDAVKQTL 57
D AG + G V P D IK++ Q Q P + G L +Y+G + A K
Sbjct: 21 DASAGAISGGVSRSVTSPLDVIKIRFQVQLEPTTSWGLVRGNLSGASKYTGMVQATKDIF 80
Query: 58 AAEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEA 92
EG RG ++G L V + + FTV ++++
Sbjct: 81 REEGFRGFWRGNVPALLMVMPYTSIQFTVLHKLKS 115
Score = 34.7 bits (78), Expect = 0.059
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQS---QPTPIPG---QLPRYSGAIDAVKQTLAAEGP 62
I G G + +V HP D +K + Q Q P G + Y +D ++Q + +EG
Sbjct: 243 ICGLGAGTSAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYRNMLDGLRQIMISEGW 302
Query: 63 RGLYKG 68
GLYKG
Sbjct: 303 HGLYKG 308
Score = 31.2 bits (69), Expect = 0.65
Identities = 24/86 (27%), Positives = 40/86 (45%), Gaps = 17/86 (19%)
Query: 199 MVAEGLTVASFRFLV--------YGTGVVKK*FK*MTREIQNFQVQLMLLEGF*PEGITG 250
+V L V RF + YG V ++ ++ M ++ Q+M+ EG+ G
Sbjct: 254 LVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYRNMLDGLR----QIMISEGW-----HG 304
Query: 251 LYKGFGTAMFRSVPVNAACFLAYKMT 276
LYKG + ++ P A F+AY+ T
Sbjct: 305 LYKGIVPSTVKAAPAGAVTFVAYEFT 330
>At1g34065 allinase like protein
Length = 327
Score = 43.9 bits (102), Expect = 1e-04
Identities = 38/124 (30%), Positives = 56/124 (44%), Gaps = 21/124 (16%)
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
L AG + GA IV P + +K ++Q+ GQ + A DAV+ +A EG G+Y
Sbjct: 145 LAAGALGGAVSSIVRVPTEVVKQRMQT------GQ---FVSAPDAVRLIIAKEGFGGMYA 195
Query: 68 GRGAPLATVAAFNAALFTVRGQMEALFR------------SHPGAGAGLAVSFLVCPTEL 115
G G+ L F+A F V Q+ ++ + GA AG L P ++
Sbjct: 196 GYGSFLLRDLPFDALQFCVYEQLRIGYKLAARRDLNDPENAMIGAFAGAVTGVLTTPLDV 255
Query: 116 IKCR 119
IK R
Sbjct: 256 IKTR 259
Score = 36.6 bits (83), Expect = 0.015
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
++ + G GA ++ P D IK +L Q G +Y G D +K + EG L
Sbjct: 234 ENAMIGAFAGAVTGVLTTPLDVIKTRLMVQ-----GSGTQYKGVSDCIKTIIREEGSSAL 288
Query: 66 YKGRGAPLATVAAFNAALFTV 86
+KG G + + + F V
Sbjct: 289 WKGMGPRVLWIGIGGSIFFGV 309
Score = 31.2 bits (69), Expect = 0.65
Identities = 12/32 (37%), Positives = 19/32 (58%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYKMTR 277
EG G+Y G+G+ + R +P +A F Y+ R
Sbjct: 188 EGFGGMYAGYGSFLLRDLPFDALQFCVYEQLR 219
Score = 30.8 bits (68), Expect = 0.85
Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 25/132 (18%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
+ LI G + G +P DTIK ++Q + +SG + GL
Sbjct: 56 ESLITGGLAGVVVEAALYPIDTIKTRIQ-----VVSPQTNFSG--------WWKDNMEGL 102
Query: 66 YKGRGAPLATVAAFNAALFTV------------RGQMEALFRSHPGAGAGLAVSFLVCPT 113
Y G G L V +A F V + A+ GA G S + PT
Sbjct: 103 YSGLGGNLVGVLPASALFFGVYEPTKQKLLKVLPDNLSAVAHLAAGALGGAVSSIVRVPT 162
Query: 114 ELIKCRFH*WRF 125
E++K R +F
Sbjct: 163 EVVKQRMQTGQF 174
>At1g14560 mitochondrial carrier like protein
Length = 331
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/95 (26%), Positives = 41/95 (42%), Gaps = 10/95 (10%)
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQL----------PRYSGAIDAVKQT 56
DL+AG+ G ++ +P D + KL Q + L P YSG + +
Sbjct: 122 DLVAGSAAGGTAVLCTYPLDLARTKLAYQVSDTRQSLRGGANGFYRQPTYSGIKEVLAMA 181
Query: 57 LAAEGPRGLYKGRGAPLATVAAFNAALFTVRGQME 91
GPRGLY+G G L + + F + +++
Sbjct: 182 YKEGGPRGLYRGIGPTLIGILPYAGLKFYIYEELK 216
Score = 42.0 bits (97), Expect = 4e-04
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+AK LIAG GA P + IK+ LQ++ + G ++K+ L +GP
Sbjct: 23 LAKTLIAGGAAGAIAKTAVAPLERIKILLQTRTNDF-----KTLGVSQSLKKVLQFDGPL 77
Query: 64 GLYKGRGAPLATVAAFNA 81
G YKG GA + + + A
Sbjct: 78 GFYKGNGASVIRIIPYAA 95
Score = 31.6 bits (70), Expect = 0.50
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQS---QPTPIPGQLPRYSGAIDAVKQTLAAE 60
V L G + G + +P D ++ ++Q QP G RY D + + +
Sbjct: 227 VRMHLPCGALAGLFGQTITYPLDVVRRQMQVENLQPMTSEGNNKRYKNTFDGLNTIVRTQ 286
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP 98
G + L+ G + A FTV M++ R P
Sbjct: 287 GWKQLFAGLSINYIKIVPSVAIGFTVYESMKSWMRIPP 324
>At5g01340 unknown protein
Length = 309
Score = 42.0 bits (97), Expect = 4e-04
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
+ +I+G + G A PFD +K +L +Q G + RY G + A++ A EG L
Sbjct: 212 QSMISGFLAGTAGPFCTGPFDVVKTRLMAQSRDSEGGI-RYKGMVHAIRTIYAEEGLVAL 270
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALF 94
++G L + A ++ V Q+ L+
Sbjct: 271 WRGLLPRLMRIPPGQAIMWAVADQVTGLY 299
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
AG +E A + PF+ +K++LQ Q P +L +Y G I + + E GL+ G
Sbjct: 117 AGVLEALA---IVTPFEVVKIRLQQQKGLSP-ELFKYKGPIHCARTIVREESILGLWSGA 172
Query: 70 GAPLATVAAFNAALFTVRGQME-ALFRSHPGAG--------------AGLAVSFLVCPTE 114
+ A +FT + + L+ H G G AG A F P +
Sbjct: 173 APTVMRNGTNQAVMFTAKNAFDILLWNKHEGDGKILQPWQSMISGFLAGTAGPFCTGPFD 232
Query: 115 LIKCR 119
++K R
Sbjct: 233 VVKTR 237
Score = 33.1 bits (74), Expect = 0.17
Identities = 33/128 (25%), Positives = 50/128 (38%), Gaps = 27/128 (21%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
++G++ G + P D IK +LQ ++ Y G + + EG R L+KG
Sbjct: 18 VSGSLGGVVEACCLQPIDVIKTRLQLD------RVGAYKGIAHCGSKVVRTEGVRALWKG 71
Query: 69 RGAPLATVAAFNAALFTVRGQMEALF----------------RSHPGAGAG-LAVSFLVC 111
L A +T+R A+F R G GAG L +V
Sbjct: 72 ----LTPFATHLTLKYTLRMGSNAMFQTAFKDSETGKVSNRGRFLSGFGAGVLEALAIVT 127
Query: 112 PTELIKCR 119
P E++K R
Sbjct: 128 PFEVVKIR 135
>At3g55640 Ca-dependent solute carrier - like protein
Length = 332
Score = 41.2 bits (95), Expect = 6e-04
Identities = 33/123 (26%), Positives = 52/123 (41%), Gaps = 17/123 (13%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
+AG + G +P D ++ +L +Q I YSG ++ EG GLYKG
Sbjct: 146 VAGGLAGITAASATYPLDLVRTRLAAQTKVI-----YYSGIWHTLRSITTDEGILGLYKG 200
Query: 69 RGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAVSFLVCPTELI 116
G L V A F+V + + +RS G+ +G+A S P +L+
Sbjct: 201 LGTTLVGVGPSIAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTATFPLDLV 260
Query: 117 KCR 119
+ R
Sbjct: 261 RRR 263
Score = 31.6 bits (70), Expect = 0.50
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYKMTRS 278
EGI GLYKG GT + P A F Y+ RS
Sbjct: 192 EGILGLYKGLGTTLVGVGPSIAISFSVYESLRS 224
Score = 31.2 bits (69), Expect = 0.65
Identities = 19/62 (30%), Positives = 32/62 (50%), Gaps = 3/62 (4%)
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRY-SGAIDAVKQTLAAEGPRGLY 66
L G++ G A P D ++ + Q + I G+ Y +G + +K+ + EG RGLY
Sbjct: 240 LACGSLSGIASSTATFPLDLVRRRKQLEG--IGGRAVVYKTGLLGTLKRIVQTEGARGLY 297
Query: 67 KG 68
+G
Sbjct: 298 RG 299
Score = 27.3 bits (59), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (54%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYK 274
EG GLY+G ++ VP CF+ Y+
Sbjct: 291 EGARGLYRGILPEYYKVVPGVGICFMTYE 319
>At3g21390 unknown protein
Length = 335
Score = 41.2 bits (95), Expect = 6e-04
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPI------PGQL-PRYSGAIDAVKQTLAA 59
D AG V GA +V P D IK++ Q Q P QL P+Y+G K
Sbjct: 18 DASAGGVAGAISRMVTSPLDVIKIRFQVQLEPTATWALKDSQLKPKYNGLFRTTKDIFRE 77
Query: 60 EGPRGLYKGRGAPLATVAAFNAALFTV 86
EG G ++G L V + + F V
Sbjct: 78 EGLSGFWRGNVPALLMVVPYTSIQFAV 104
Score = 36.6 bits (83), Expect = 0.015
Identities = 23/66 (34%), Positives = 30/66 (44%), Gaps = 6/66 (9%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQS---QPTPIPG---QLPRYSGAIDAVKQTLAAEGP 62
+ G G +V HP D +K + Q Q P G +L Y D + Q L +EG
Sbjct: 239 LCGLASGTVSKLVCHPLDVVKKRFQVEGLQRHPKYGARVELNAYKNMFDGLGQILRSEGW 298
Query: 63 RGLYKG 68
GLYKG
Sbjct: 299 HGLYKG 304
Score = 32.3 bits (72), Expect = 0.29
Identities = 22/76 (28%), Positives = 33/76 (42%), Gaps = 5/76 (6%)
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
I+G + G A + +PFD ++ L SQ P P A ++ QT G +GLY G
Sbjct: 131 ISGALAGCAATVGSYPFDLLRTVLASQGE--PKVYPNMRSAFLSIVQT---RGIKGLYAG 185
Query: 69 RGAPLATVAAFNAALF 84
L + + F
Sbjct: 186 LSPTLIEIIPYAGLQF 201
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYKM 275
EG GLYKG + ++ P A F+AY++
Sbjct: 296 EGWHGLYKGIVPSTIKAAPAGAVTFVAYEL 325
>At4g32400 adenylate translocator (brittle-1) - like protein
Length = 392
Score = 40.8 bits (94), Expect = 8e-04
Identities = 24/93 (25%), Positives = 40/93 (42%), Gaps = 7/93 (7%)
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+ L+AG G +Q ++ +P + +K +L Q Y G DA + + EGP
Sbjct: 204 IPASLLAGACAGVSQTLLTYPLELVKTRLTIQRGV-------YKGIFDAFLKIIREEGPT 256
Query: 64 GLYKGRGAPLATVAAFNAALFTVRGQMEALFRS 96
LY+G L V + A + + +RS
Sbjct: 257 ELYRGLAPSLIGVVPYAATNYFAYDSLRKAYRS 289
Score = 30.4 bits (67), Expect = 1.1
Identities = 34/126 (26%), Positives = 49/126 (37%), Gaps = 22/126 (17%)
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
L++G V GA V P +TI+ L + + + + EG GL++
Sbjct: 114 LLSGAVAGAVSRTVVAPLETIRTHLMVGSGG--------NSSTEVFSDIMKHEGWTGLFR 165
Query: 68 G------RGAPLATVAAF-----NAALFTVRGQMEAL---FRSHPGAGAGLAVSFLVCPT 113
G R AP V F N L GQ + GA AG++ + L P
Sbjct: 166 GNLVNVIRVAPARAVELFVFETVNKKLSPPHGQESKIPIPASLLAGACAGVSQTLLTYPL 225
Query: 114 ELIKCR 119
EL+K R
Sbjct: 226 ELVKTR 231
Score = 29.3 bits (64), Expect = 2.5
Identities = 12/29 (41%), Positives = 16/29 (54%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYK 274
EGI G YKG G + + VP F+ Y+
Sbjct: 351 EGILGWYKGLGPSCLKLVPAAGISFMCYE 379
>At5g09470 mitochondrial carrier-like protein
Length = 337
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/94 (24%), Positives = 36/94 (37%), Gaps = 6/94 (6%)
Query: 2 GDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEG 61
G + + A G + +P D +K ++ + I Y G +D + +A EG
Sbjct: 246 GGIGTHVAASFAAGIVAAVASNPIDVVKTRMMNADKEI------YGGPLDCAVKMVAEEG 299
Query: 62 PRGLYKGRGAPLATVAAFNAALFTVRGQMEALFR 95
P LYKG F LF Q+ L +
Sbjct: 300 PMALYKGLVPTATRQGPFTMILFLTLEQVRGLLK 333
Score = 37.0 bits (84), Expect = 0.012
Identities = 28/106 (26%), Positives = 47/106 (43%), Gaps = 5/106 (4%)
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
+ AG + GA +VG+P D V++Q+ + + Y +DA+ + EG L++
Sbjct: 151 ITAGLIAGAVGSVVGNPADVAMVRMQADGSLPLNRRRNYKSVVDAIDRIARQEGVSSLWR 210
Query: 68 GR----GAPLATVAAFNAALFTVRGQMEALFRSHPGA-GAGLAVSF 108
G + A+ A V+ + A R PG G +A SF
Sbjct: 211 GSWLTVNRAMIVTASQLATYDHVKEILVAGGRGTPGGIGTHVAASF 256
>At3g53940 unknown protein
Length = 365
Score = 40.4 bits (93), Expect = 0.001
Identities = 32/129 (24%), Positives = 51/129 (38%), Gaps = 17/129 (13%)
Query: 3 DVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGP 62
D++ ++G + G +P D ++ +L +Q I Y G A + EG
Sbjct: 175 DISVHFVSGGLAGLTAASATYPLDLVRTRLSAQRNSI-----YYQGVGHAFRTICREEGI 229
Query: 63 RGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAVSFLV 110
GLYKG GA L V A F + + SH G+ +G+ S
Sbjct: 230 LGLYKGLGATLLGVGPSLAISFAAYETFKTFWLSHRPNDSNAVVSLGCGSLSGIVSSTAT 289
Query: 111 CPTELIKCR 119
P +L++ R
Sbjct: 290 FPLDLVRRR 298
Score = 29.3 bits (64), Expect = 2.5
Identities = 14/29 (48%), Positives = 16/29 (54%)
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAYK 274
EGI GLYKG G + P A F AY+
Sbjct: 227 EGILGLYKGLGATLLGVGPSLAISFAAYE 255
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.341 0.150 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,958,661
Number of Sequences: 26719
Number of extensions: 176045
Number of successful extensions: 693
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 458
Number of HSP's gapped (non-prelim): 218
length of query: 280
length of database: 11,318,596
effective HSP length: 98
effective length of query: 182
effective length of database: 8,700,134
effective search space: 1583424388
effective search space used: 1583424388
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0520.2