BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0490.17
(392 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07820 polygalacturonase (PGA3) 373 e-104
At3g07840 putative polygalacturonase 363 e-101
At3g07830 polygalacturonase like protein 355 3e-98
At5g48140 polygalacturonase 350 1e-96
At3g07850 exopolygalacturonase 333 1e-91
At3g14040 putative polygalacturonase 332 2e-91
At1g17150 putative polygalacturonase 311 5e-85
At4g18180 polygalacturonase-like protein 303 8e-83
At2g43870 putative polygalacturonase 300 1e-81
At1g05650 putative polygalacturonase 298 3e-81
At1g05660 putative polygalacturonase 293 1e-79
At3g59850 polygalacturonase-like protein 289 2e-78
At1g78400 similar to exopolygalacturonase precursor sp|Q00293|PG... 288 5e-78
At2g43890 putative polygalacturonase 281 6e-76
At1g43090 hypothetical protein 281 6e-76
At2g26620 putative polygalacturonase 279 2e-75
At1g43080 hypothetical protein 278 5e-75
At2g33160 putative polygalacturonase 276 1e-74
At1g43100 hypothetical protein 272 2e-73
At2g15450 putative polygalacturonase 271 5e-73
>At3g07820 polygalacturonase (PGA3)
Length = 391
Score = 373 bits (958), Expect = e-104
Identities = 189/391 (48%), Positives = 262/391 (66%), Gaps = 16/391 (4%)
Query: 8 STAIVLFLLLLSGSAQSIVFDIRTFGGAPNSDITQAFLNAWKQACASTSPSKIVISKATY 67
ST ++ LL +S +A+ + T G + SDITQA L A+ AC S+SPSK+VI K +
Sbjct: 8 STIFIICLLGISANAE-----VFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEF 62
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
K+ + ++GPCKAPIE+ + GT++A D NA+ G +WV G +D F L+G G FDG G
Sbjct: 63 KLGEIEMRGPCKAPIEVTLQGTVKA--DGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGN 120
Query: 128 SAWKLQKACGAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKI 185
+AW++ C T C K ++I F+F+ +S +R ++S D+K FH+ +LG N T + KI
Sbjct: 121 AAWRVNN-CHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKI 179
Query: 186 IAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSI 245
+AP DS NTDGIH+ +S VKILNS I+TGDDC+S+GDG K++ + V CGPGHG S+
Sbjct: 180 VAPEDSP--NTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISV 237
Query: 246 GSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPV 305
GSLG E+ V I V NCTL T NG+RIKTWP+A ++ +++ FEDI + +V NP+
Sbjct: 238 GSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPI 297
Query: 306 IIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISL 365
+IDQ+YCP N C+KQ S IK+ N++FKNI+GTS KD V L CS G PC+ VE+ DI +
Sbjct: 298 LIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDI 357
Query: 366 TFNGA--PAMAKCANVKPIIIG--KAPSCSA 392
+NGA PA C+NV P I+G +CSA
Sbjct: 358 KYNGADGPATFHCSNVSPKILGSQSPKACSA 388
>At3g07840 putative polygalacturonase
Length = 401
Score = 363 bits (932), Expect = e-101
Identities = 184/395 (46%), Positives = 262/395 (65%), Gaps = 14/395 (3%)
Query: 4 SLIRSTAIVLFLLLLSGSAQSIVFDIRTFGGAPNSDITQAFLNAWKQACASTSPSKIVIS 63
S + +A++ + LL SA + VF++ GG+P SDITQA L A+ AC + + SK+VI+
Sbjct: 3 SYLGISAVLFVISLLGFSANAEVFNV---GGSPGSDITQALLKAFTSACQAPTASKVVIT 59
Query: 64 KATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFD 123
K +K+ + + GPCKAP+EI + GT++A D A+ G +WV ++ F L+G G FD
Sbjct: 60 KGEFKLGEIEMTGPCKAPVEINLQGTLKA--DGKAIQGKERWVVFLRINGFKLNGGGIFD 117
Query: 124 GRGASAWKLQKACGAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFD 181
G G +AW++ C T C K ++I F+F++++ +R ++S D+K FH+ +LG N TFD
Sbjct: 118 GEGNAAWRVNN-CHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFD 176
Query: 182 GFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGH 241
K+IAP +S NTDGIH+ +S VKILNS IATGDDC+S+GDG K++ + NV CGPGH
Sbjct: 177 NVKVIAPAESP--NTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGH 234
Query: 242 GFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNV 301
G S+GSLG E+ V I V NCTL T NG+RIKTWP+A + + + FE+I + NV
Sbjct: 235 GISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNV 294
Query: 302 YNPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELS 361
NP++IDQ+YCP N C+KQ PS IK+ +++FKNI+GTS KD V L CS PC VE+
Sbjct: 295 SNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIG 354
Query: 362 DISLTFNGA--PAMAKCANVKPIIIG--KAPSCSA 392
+I+L + GA P C+NV P ++G +CSA
Sbjct: 355 NINLEYKGADGPPTFMCSNVSPKLVGTQNPKACSA 389
>At3g07830 polygalacturonase like protein
Length = 397
Score = 355 bits (910), Expect = 3e-98
Identities = 177/382 (46%), Positives = 254/382 (66%), Gaps = 13/382 (3%)
Query: 8 STAIVLFLLLLSGSAQSIVFDIRTFGGAPNSDITQAFLNAWKQACASTSPSKIVISKATY 67
ST V+ LL S +A ++ +P SDITQA L A+ AC S +P K+VI K +
Sbjct: 8 STIFVICLLGFSANAHEVL----RLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQF 63
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
K+ + + GPCK+P+EI + GT+ A D N+++G +WV +D F L+G GTFDG G
Sbjct: 64 KLGEIMMSGPCKSPVEITLLGTVLA--DGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGN 121
Query: 128 SAWKLQKACGAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKI 185
+AW++ C T C K ++I F+F+ ++ +R ++S D+K FH+ ++G N TFD KI
Sbjct: 122 AAWRVNN-CHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKI 180
Query: 186 IAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSI 245
+AP +S NTDGIH+ +S V I+NS I+TGDDCVS+GDG ++ + NV CGPGHG S+
Sbjct: 181 MAPAESP--NTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISV 238
Query: 246 GSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPV 305
GSLG E+ V I V NCTL T NG+RIKTWP+A ++ +N+ FE+I + NV NP+
Sbjct: 239 GSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPI 298
Query: 306 IIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISL 365
+IDQ+YCP N C+KQ S IK++N++F+ I+GTS KD V L CS G PCE V++ DI++
Sbjct: 299 LIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINI 358
Query: 366 TFNGA--PAMAKCANVKPIIIG 385
+ GA PA C+NV+P ++G
Sbjct: 359 QYTGADGPATFMCSNVRPKLVG 380
>At5g48140 polygalacturonase
Length = 395
Score = 350 bits (897), Expect = 1e-96
Identities = 177/373 (47%), Positives = 249/373 (66%), Gaps = 13/373 (3%)
Query: 17 LLSGSAQSIVFDIRTFGGAPNSDITQAFLNAWKQACASTSPSKIVISKATYKMNAVNVKG 76
LL SA + +F+I + P SDIT A L A+ +AC + S ++I K YK+ + + G
Sbjct: 16 LLGLSANAKIFNINS---PPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMG 72
Query: 77 PCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGASAWKLQKAC 136
PCKAPI I + GT++A D NA NG +WV ++ F L+G G FDG G +AW++ C
Sbjct: 73 PCKAPIRIALLGTVKA--DGNA-NGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNN-C 128
Query: 137 GAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKIIAPGDSISI 194
T C K ++I F+F+ + +R +TS D+K FH+ ++G N TF+ KIIAP +S
Sbjct: 129 HKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESP-- 186
Query: 195 NTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIGSLGTNPTE 254
NTDGIH+ +S +KI+NS I+TGDDCVS+GDG K++ + V CGPGHG SIGSLG E
Sbjct: 187 NTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHE 246
Query: 255 EPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVIIDQQYCPS 314
E V I + NCTL T NG+RIKTWP+A T+ +++ FE+I + NV NP++IDQ+YCP
Sbjct: 247 ENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPW 306
Query: 315 NLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISLTFNGA--PA 372
N C+KQ PS IK++N++FK I+GTS KD V L CS G PC+ VE+ D+++ + GA PA
Sbjct: 307 NQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPA 366
Query: 373 MAKCANVKPIIIG 385
+C+NV P ++G
Sbjct: 367 TFQCSNVSPKLVG 379
>At3g07850 exopolygalacturonase
Length = 444
Score = 333 bits (854), Expect = 1e-91
Identities = 171/376 (45%), Positives = 235/376 (62%), Gaps = 13/376 (3%)
Query: 18 LSGSAQSIVFDIRTFG--GAPNSDITQAFLNAWKQACASTSPSKIVISKATYKMNAVNVK 75
+SG+ D++ G G +D + AF AWK+ACA+ S I + K Y + ++ K
Sbjct: 61 VSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGST--ITVPKGEYMVESLEFK 118
Query: 76 GPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGN-GTFDGRGASAWKLQK 134
GPCK P+ ++++G +AP W+ + FTL+GN FDG+G+ AWK
Sbjct: 119 GPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKAND 178
Query: 135 ACGAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKIIAPGDSI 192
C T C+ +NI F L +S + S+TS +SK FH+ +L C N T I AP +S+
Sbjct: 179 -CAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESL 237
Query: 193 SINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIGSLGTNP 252
NTDGIHI +S V ++ + I TGDDCVS+GDG +++ + NV+CGPGHG SIGSLG P
Sbjct: 238 --NTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYP 295
Query: 253 TEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVIIDQQYC 312
E+PV+ + V+ C + NT NGVRIKTWP +P +N+ FEDITM NV PV+IDQ+YC
Sbjct: 296 NEQPVKGVTVRKCLIKNTDNGVRIKTWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYC 354
Query: 313 PSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISLTFNG--A 370
P C PS++K+S+VT K IKGTS TK V L CS GVPC + LSDI+L NG
Sbjct: 355 PYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEG 414
Query: 371 PAMAKCANVKPIIIGK 386
PA++ C+N+KPI+ GK
Sbjct: 415 PAVSACSNIKPILSGK 430
>At3g14040 putative polygalacturonase
Length = 445
Score = 332 bits (851), Expect = 2e-91
Identities = 171/366 (46%), Positives = 232/366 (62%), Gaps = 13/366 (3%)
Query: 28 DIRTFG--GAPNSDITQAFLNAWKQACASTSPSKIVISKATYKMNAVNVKGPCKAPIEIQ 85
D++ G G +D + AF AWK+ACA+ S I + K Y + ++ KGPCK P+ ++
Sbjct: 72 DVKASGAKGDGKTDDSAAFAAAWKEACAAGST--ITVPKGEYLVESLEFKGPCKGPVTLE 129
Query: 86 VDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGN-GTFDGRGASAWKLQKACGAT--CSK 142
++G +AP W+ + FTL+GN FDG+G+ AWK C T C+
Sbjct: 130 LNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKAND-CAKTGKCNS 188
Query: 143 RSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKIIAPGDSISINTDGIHIA 202
+NI F L +S + S+TS +SK FH+ +L C N T I AP +S+ NTDGIHI
Sbjct: 189 LPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESL--NTDGIHIG 246
Query: 203 KSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIGSLGTNPTEEPVENIIV 262
+S V ++ + I TGDDCVS+GDG +++ + NV+CGPGHG SIGSLG P E+PV+ + V
Sbjct: 247 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 306
Query: 263 KNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVIIDQQYCPSNLCSKQSP 322
+ C + NT NGVRIKTWP +P +N+ FEDITM NV PV+IDQ+YCP C P
Sbjct: 307 RKCLIKNTDNGVRIKTWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVP 365
Query: 323 SKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISLTFNG--APAMAKCANVK 380
SK+K+S+VT KNIKGTS TK V L CS GVPC + LSDI+L NG PA++ C+N+K
Sbjct: 366 SKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIK 425
Query: 381 PIIIGK 386
PI+ GK
Sbjct: 426 PILSGK 431
>At1g17150 putative polygalacturonase
Length = 402
Score = 311 bits (796), Expect = 5e-85
Identities = 169/392 (43%), Positives = 237/392 (60%), Gaps = 18/392 (4%)
Query: 12 VLFLLLLSGSAQSI----VFDIRTFG--GAPNSDITQAFLNAWKQACASTSPSKIVISKA 65
+L LL+ +++ I VFD+R++G G D T AF NAWK AC PSK+ I
Sbjct: 14 LLLLLIAVTTSRPITRPKVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLG 73
Query: 66 TYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGR 125
T+ + V GPC I +DGT+ AP + + + W+ Y++Y T+ G+GT DG+
Sbjct: 74 TFYLGGVTFVGPCDGKISFVIDGTLLAPPNNDDIKKEI-WINFRYINYLTVFGDGTLDGQ 132
Query: 126 GASAWKL---QKACGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDG 182
G +W L QK C K ++N+GF+F+K+S++ +TS +SK H L +F+
Sbjct: 133 GKKSWSLIDCQK--DNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITR 190
Query: 183 FKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHG 242
IIAP +S NTDGI IA S++++I N++I+TGDDC+++ GN + I+NVKCGPGHG
Sbjct: 191 VNIIAPSNSP--NTDGIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHG 248
Query: 243 FSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVY 302
SIGSLG N E+ V ++V+N T T NG+RIKTW ++ T + NL +E++ M+NV
Sbjct: 249 ISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVE 308
Query: 303 NPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSD 362
NP+ IDQ+YCP CS S I+I NVT KNI GTS+ K V CS PC+ V+L D
Sbjct: 309 NPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLID 368
Query: 363 ISLTFNG--APAMAKCANVKPIIIGK--APSC 390
I+LT +G PA A C NV GK P C
Sbjct: 369 INLTHHGVDGPASALCENVDGSATGKMVPPHC 400
>At4g18180 polygalacturonase-like protein
Length = 414
Score = 303 bits (777), Expect = 8e-83
Identities = 161/397 (40%), Positives = 233/397 (58%), Gaps = 28/397 (7%)
Query: 13 LFLLLLSGSAQSIV-------FDIRTFGGAPNS--DITQAFLNAWKQACASTSPS-KIVI 62
+F++L A +IV D+R+FG N D T+AF+ AW +AC S+S S ++I
Sbjct: 14 IFVILSPSEAGNIVDKSSVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLII 73
Query: 63 SKATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTF 122
+ + + ++ GPC + V ++A TD + W+ G+++ TL+G GTF
Sbjct: 74 PRGEFSVGSLRFSGPCTNVSNLTV--RVKASTDLSKYRSGGGWIQFGWINGLTLTGGGTF 131
Query: 123 DGRGASAWKLQKACG-ATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFD 181
DG+GA AW + C ++ F + + VR ++S +SKFFH+ L+ C +F
Sbjct: 132 DGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGT 191
Query: 182 GFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGH 241
I AP DS NTDGIHI +S++V S+IATGDDCVS+G GN ITI ++KCGPGH
Sbjct: 192 RLNITAPSDSP--NTDGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGH 249
Query: 242 GFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNV 301
G S+GSLG P E+ V ++VK+C ++ T NG+RIKTW +PG S TN+TFE+I M NV
Sbjct: 250 GISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNV 309
Query: 302 YNPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELS 361
NP+IIDQ YCP + C PSK+++S + FKNI+GTS + V L+CS G+PC+ V L
Sbjct: 310 TNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLE 369
Query: 362 DISLTFNGAPAMAK-------------CANVKPIIIG 385
++ L + + K C NV+ IG
Sbjct: 370 NVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANYIG 406
>At2g43870 putative polygalacturonase
Length = 384
Score = 300 bits (767), Expect = 1e-81
Identities = 162/388 (41%), Positives = 227/388 (57%), Gaps = 11/388 (2%)
Query: 8 STAIVLFLLLLSGSAQSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTSPSKIVISKA 65
++ +VLF+ S + +++ +FG P+ +D T+AF+ W+ ACAS+ P IV+ K
Sbjct: 2 ASLLVLFVFFFISSCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKG 61
Query: 66 TYKMNAVNVKGP-CKA-PIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFD 123
+ + +V G CK P+ ++DGT+ AP D + W+ ++D T+ G G D
Sbjct: 62 RFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYG-GVLD 120
Query: 124 GRGASAWKLQKACGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGF 183
RGAS W +K+ G C + IGF + V +TS +S+ FHV + GC N G
Sbjct: 121 ARGASLWDCKKS-GKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGV 179
Query: 184 KIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGF 243
K++A G+S NTDGIH+ S+ V I N+ I+TGDDCVS+G G + I NV CGPGHG
Sbjct: 180 KVLAAGNSP--NTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGI 237
Query: 244 SIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYN 303
SIGSLG + E V+N+ VK T T T NGVRIK+W P + N+ F+ M NV N
Sbjct: 238 SIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSW-ARPSSGFAKNIRFQHCVMNNVEN 296
Query: 304 PVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDI 363
P+IIDQ YCP + C +Q S IKIS+V F +I GTS T+ GV L+CSS PC G+ L D+
Sbjct: 297 PIIIDQNYCPDHDCPRQ-VSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDV 355
Query: 364 SLTFNGAPAMAKCANVKPIIIG-KAPSC 390
LT+ PA + C + I G P+C
Sbjct: 356 KLTYQNKPAASACTHAGGIEAGFFQPNC 383
>At1g05650 putative polygalacturonase
Length = 394
Score = 298 bits (763), Expect = 3e-81
Identities = 156/361 (43%), Positives = 215/361 (59%), Gaps = 8/361 (2%)
Query: 21 SAQSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTSPSKIVISKATYKMNAVNVKGPC 78
S+ SIVF++ +FG P+ +D T AFL AW+ AC S + + +V+ T+ + + GPC
Sbjct: 22 SSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPC 81
Query: 79 KAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGASAWKLQKACGA 138
K+ I QV GT+ AP D + W+ V+ F+L G GTFD RG+ W +K+ G
Sbjct: 82 KSKITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVG-GTFDARGSGFWSCRKS-GQ 139
Query: 139 TCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKIIAPGDSISINTDG 198
C +I FN K + V S +S+ H+TL GCTN +++APGDS NTDG
Sbjct: 140 NCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSP--NTDG 197
Query: 199 IHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIGSLGTNPTEEPVE 258
+ ST V + S + TGDDCV++G G ++ I + CGPGHG SIGSL E+ VE
Sbjct: 198 FTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLAKQLNEDGVE 257
Query: 259 NIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVIIDQQYCPSNLCS 318
N+ V + T +QNGVRIK+W P T V N+ F+++ M NV NP+IIDQ YCPSN
Sbjct: 258 NVTVSSSVFTGSQNGVRIKSW-ARPSTGFVRNVFFQNLIMRNVQNPIIIDQNYCPSNQGC 316
Query: 319 KQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISLTFN-GAPAMAKCA 377
S +KI+ VT+KNI+GTS T++ + L CS PC G+ L DI LT+N G PA + C
Sbjct: 317 PTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNKGTPATSLCF 376
Query: 378 N 378
N
Sbjct: 377 N 377
>At1g05660 putative polygalacturonase
Length = 394
Score = 293 bits (750), Expect = 1e-79
Identities = 160/382 (41%), Positives = 221/382 (56%), Gaps = 9/382 (2%)
Query: 1 MDMSLIRSTAIVLFLLLLSGS-AQSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTSP 57
M S+IR + + L + S + S VF++ +FG P+ +D T AFL AW+ AC S S
Sbjct: 1 MTKSVIRFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASS 60
Query: 58 SKIVISKATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLS 117
+ +V+ K T+ + + GPCK+ I QV GT+ AP D + W+ V+ F+L
Sbjct: 61 ATVVVPKGTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLV 120
Query: 118 GNGTFDGRGASAWKLQKACGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTN 177
G GTFD R W +K+ G C +I FN K + V S +S+ H+TL GCTN
Sbjct: 121 G-GTFDARANGFWSCRKS-GQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTN 178
Query: 178 FTFDGFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKC 237
K++APG+S NTDG H+ ST V S + TGDDCV++G G +++ I + C
Sbjct: 179 VVVRNVKLVAPGNSP--NTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLAC 236
Query: 238 GPGHGFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDIT 297
GPGHG SIGSL E+ VEN+ V + T +QNGVRIK+W P V + F+D+
Sbjct: 237 GPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSW-ARPSNGFVRTVFFQDLV 295
Query: 298 MVNVYNPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEG 357
M NV NP+IIDQ YCP++ S +KIS VT+KNI+GTS T++ + L CS PC G
Sbjct: 296 MKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTG 355
Query: 358 VELSDISLTFN-GAPAMAKCAN 378
+ L DI LT+N G PA + C N
Sbjct: 356 ITLQDIKLTYNKGTPATSFCFN 377
>At3g59850 polygalacturonase-like protein
Length = 388
Score = 289 bits (739), Expect = 2e-78
Identities = 155/375 (41%), Positives = 219/375 (58%), Gaps = 9/375 (2%)
Query: 8 STAIVLFLLLLSGSAQSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTSPSKIVISKA 65
S IVL LL S+ + ++I ++G P+ +D T+AF W +ACAS P I++ K
Sbjct: 4 SLLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKG 63
Query: 66 TYKMNAVNVKGP-CKAP-IEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFD 123
+ + ++ G CK + ++ GT+ AP+D + W+ ++D ++ G G D
Sbjct: 64 RFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYG-GVLD 122
Query: 124 GRGASAWKLQKACGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGF 183
+GAS W +K+ G C + +IGF ++ + +TS +S+ FHV + GC+N DG
Sbjct: 123 AQGASLWSCKKS-GKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGV 181
Query: 184 KIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGF 243
K+ A G+S NTDGIH+ S+ V ILNS I+TGDDCVS+G G + I NV CGPGHG
Sbjct: 182 KVSADGNSP--NTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGI 239
Query: 244 SIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYN 303
SIGSLG E V+NI VK T T T+NGVRIK+W P N+ F+ M NV N
Sbjct: 240 SIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSW-ARPSNGFAKNIRFQHCVMNNVQN 298
Query: 304 PVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDI 363
P++IDQ YCP N S IKIS+V F +I GTS T+ GV L+CSS PC G+ + D+
Sbjct: 299 PIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDV 358
Query: 364 SLTFNGAPAMAKCAN 378
LT+ PA C++
Sbjct: 359 KLTYRNKPATTDCSH 373
>At1g78400 similar to exopolygalacturonase precursor
sp|Q00293|PGLX_ASPTU
Length = 412
Score = 288 bits (736), Expect = 5e-78
Identities = 166/413 (40%), Positives = 235/413 (56%), Gaps = 29/413 (7%)
Query: 3 MSLIRSTAIVLFLLLLSGSAQSI---------VFDIRTFG--GAPNSDITQAFLNAWKQA 51
+S I +++LF+ ++ S + VFD+R++G G +D T AF AWK A
Sbjct: 2 VSTISGFSLILFIAAVASSISAAPSAALVGRKVFDVRSYGARGDGKTDNTMAFTKAWKDA 61
Query: 52 CASTSPSKIVISKATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYV 111
C ++ I T+ + AV GPCK+ I + GT+ AP DPNA+ W+ YV
Sbjct: 62 CQWKGLPRVYIPFGTFYLGAVAFTGPCKSRISFIIKGTLLAPKDPNAIKQD-SWIIFRYV 120
Query: 112 DYFTLSGNGTFDGRGASAWKLQKACGAT--CSKRSMNIGFNFLKHSTVRSVTSKDSKFFH 169
DY T+SG G DG+G+ +W L C T C MN+GF F++ S + + S +SK H
Sbjct: 121 DYLTVSGGGILDGQGSYSWPLNN-CRQTHNCRALPMNMGFQFVRFSRLTRIKSINSKMGH 179
Query: 170 VTLLGCTNFTFDGFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKH 229
+ +F I APGDS NTDGI I S +KI + +IATGDDC+++ G +
Sbjct: 180 LNFFSVQHFDITRVNIKAPGDSP--NTDGIKIGSSNHMKIHHVDIATGDDCIAILSGTFN 237
Query: 230 ITIHNVKCGPGHGFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVT 289
+ I+ V CGPGHG S+GSLG E+ V+ +IV+N T NGVRIKTWP+ + V+
Sbjct: 238 LDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSIFNGTSNGVRIKTWPSPGEPNLVS 297
Query: 290 NLTFEDITMVNVYNPVIIDQQYCPSNLCSKQ--------SPSKIKISNVTFKNIKGTSET 341
N F+++ M++V +P+ IDQ+YCP+ CS Q S SKI+I +V F+NI GTS
Sbjct: 298 NFLFKNLQMIDVQSPINIDQRYCPNPPCSFQVTSLTRNKSFSKIQIRDVKFQNIWGTSTA 357
Query: 342 KDGVILNCSSGVPCEGVELSDISLTFNG--APAMAKCANVKPIIIGK--APSC 390
K+ V L CS VPC+ V+L +I++ G PA + C NV I GK PSC
Sbjct: 358 KEAVKLQCSKNVPCKNVQLFNINIVHRGRDGPATSVCENVGGWIGGKISPPSC 410
>At2g43890 putative polygalacturonase
Length = 392
Score = 281 bits (718), Expect = 6e-76
Identities = 145/389 (37%), Positives = 225/389 (57%), Gaps = 9/389 (2%)
Query: 1 MDMSLIRSTAIVLF--LLLLSGSAQSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTS 56
MD + + + ++ F LL+ S + +++ +FG P+ +D T+AFL AW+ AC S +
Sbjct: 1 MDNNKLVAVLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAA 60
Query: 57 PSKIVISKATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTL 116
+ + + ++ + V +GPC++ I Q+ GTI AP+D L + W+ V+ ++
Sbjct: 61 AVTVTVPRGSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISI 120
Query: 117 SGNGTFDGRGASAWKLQKACGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCT 176
G GT D RGAS W +K+ G +C + ++ FN+ V +TS +S+ H+ + C
Sbjct: 121 IG-GTLDARGASFWACRKS-GKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCN 178
Query: 177 NFTFDGFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVK 236
N K++AP S NTDG+H+ S V + + TGDDC+S+G G +++ + +
Sbjct: 179 NVIVRKVKLVAPDQSP--NTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLN 236
Query: 237 CGPGHGFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDI 296
CGPGHG SIGSLG + E VENI + N + + NGVRIKTW T V N+ F+++
Sbjct: 237 CGPGHGISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTW-ARQSTGFVRNVLFQNL 295
Query: 297 TMVNVYNPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCE 356
M NV NP+I+DQ YCPSN + S +KIS V ++NI+GTS T+ + +CS PC+
Sbjct: 296 IMKNVQNPIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQ 355
Query: 357 GVELSDISLTFNGAPAMAKCANVKPIIIG 385
+ L DI LTFNG A + C N+K + G
Sbjct: 356 AIRLHDIKLTFNGRSATSTCKNIKGVKAG 384
>At1g43090 hypothetical protein
Length = 444
Score = 281 bits (718), Expect = 6e-76
Identities = 151/385 (39%), Positives = 220/385 (56%), Gaps = 15/385 (3%)
Query: 14 FLLLLSGSAQSI---VFDIRTFGGAPN--SDITQAFLNAWKQACASTS-PSKIVISKATY 67
FL ++ S +I VF++R +G P+ +D AF + WK AC S SKI + K T+
Sbjct: 15 FLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRISGSSKIYVPKGTF 74
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
+ V GPCK PIE +DGT+ AP +P + W+ Y++ ++SG+GT DG+G
Sbjct: 75 YLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQD-TWINFRYINNLSISGSGTLDGQGK 133
Query: 128 SAWKLQKACGAT-CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKII 186
+W L T C K +M +GF F+ +S ++ +TS +SK H F G I
Sbjct: 134 YSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTIT 193
Query: 187 APGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIG 246
APGDS NTDGI + +++ I N+NI TGDDC+++ G ++ I NVKCGPGHG S+G
Sbjct: 194 APGDSP--NTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVG 251
Query: 247 SLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVI 306
SLG N E+ V+++ V++ T +G+RIKTW ++ V+N +E+I M++V P+
Sbjct: 252 SLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPIN 311
Query: 307 IDQQYCPSNLC--SKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDIS 364
IDQ+YCP C K+ S ++I ++ KNI GTS V L CS PC+ VEL DI+
Sbjct: 312 IDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDIN 371
Query: 365 LTFNG---APAMAKCANVKPIIIGK 386
L G + A C NV + GK
Sbjct: 372 LKHTGLEKGHSTAMCENVDGSVRGK 396
>At2g26620 putative polygalacturonase
Length = 402
Score = 279 bits (714), Expect = 2e-75
Identities = 147/388 (37%), Positives = 225/388 (57%), Gaps = 14/388 (3%)
Query: 10 AIVLFLLLLSGSAQSI----VFDIRTFGGAPN--SDITQAFLNAWKQACASTS-PSKIVI 62
A+ L LLL+ +++S VF+++ G P+ +D T AF + W +AC S SKI +
Sbjct: 10 ALCLSLLLIVVASRSTIRPKVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYV 69
Query: 63 SKATYKMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTF 122
K T+ + V GPCK PIE +DGT+ AP +PN + W+ Y++ ++SG+GT
Sbjct: 70 PKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPNDIKQD-TWINFRYINNLSISGSGTL 128
Query: 123 DGRGASAWKLQKAC-GATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFD 181
DG+G +W L C K ++++GF F+ +S ++ +TS +SK H +F
Sbjct: 129 DGQGKQSWPLNDCHKNPNCPKLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNIT 188
Query: 182 GFKIIAPGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGH 241
G I AP DS NTDGI + ++++I N+NI TGDDC+++ G + I N+ CGPGH
Sbjct: 189 GVTITAPSDSP--NTDGIKMGSCSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGH 246
Query: 242 GFSIGSLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNV 301
G S+GSLG N E+ V+++ V++ T +G+RIKTW ++ V+N +E+I M++V
Sbjct: 247 GISVGSLGKNKDEKDVKDLFVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDV 306
Query: 302 YNPVIIDQQYCPSNLCSKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELS 361
P+ IDQ+YCP C + S ++I ++ KNI GTS+ K V L CS PC+ VEL
Sbjct: 307 GKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELI 366
Query: 362 DISLTFNG---APAMAKCANVKPIIIGK 386
DI++ NG ++ C NV GK
Sbjct: 367 DINIKQNGLEDGSSITVCENVDGFARGK 394
>At1g43080 hypothetical protein
Length = 404
Score = 278 bits (710), Expect = 5e-75
Identities = 148/378 (39%), Positives = 217/378 (57%), Gaps = 15/378 (3%)
Query: 14 FLLLLSGSAQSI---VFDIRTFGGAPN--SDITQAFLNAWKQACASTS-PSKIVISKATY 67
FL + S +I VF++R +G P+ +D AF + WK+AC S SKI + K T+
Sbjct: 15 FLFIAVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTF 74
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
+ V GPCK PIE +DGT+ AP +P + W+ Y++ ++SG+GT DG+G
Sbjct: 75 YLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQD-TWINFRYINNLSISGSGTLDGQGK 133
Query: 128 SAWKLQKACGAT-CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKII 186
+W L T C K +M +GF F+ +S ++ +TS +SK H F G I
Sbjct: 134 YSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTIT 193
Query: 187 APGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIG 246
APGDS NTDGI + +++ I N+NI TGDDC+++ G ++ I N+KCGPGHG S+G
Sbjct: 194 APGDSP--NTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVG 251
Query: 247 SLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVI 306
SLG N E+ V+++ V++ T +G+RIKTW ++ V+N +E+I M++V P+
Sbjct: 252 SLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPIN 311
Query: 307 IDQQYCPSNLC--SKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDIS 364
IDQ+YCP C K+ S ++I ++ KNI GTS V L CS PC+ VEL DI+
Sbjct: 312 IDQKYCPHPPCEHEKKGESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDIN 371
Query: 365 LTFNG---APAMAKCANV 379
L G + A C NV
Sbjct: 372 LKHTGLEKGHSTAMCENV 389
>At2g33160 putative polygalacturonase
Length = 664
Score = 276 bits (706), Expect = 1e-74
Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 11/372 (2%)
Query: 23 QSIVFDIRTFGGAPNS--DITQAFLNAWKQACA-STSPSKIVISKATYKMNAVNVKGPCK 79
Q +FD+R +G +S D AF AW +AC S S + I + + V GPCK
Sbjct: 28 QPKIFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCK 87
Query: 80 APIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGASAWKLQKACGAT 139
+ I + GT+ AP +P A+N +W+ YVD T++G G DG+G+ +W L T
Sbjct: 88 SSITFFIRGTLLAPRNPYAINQE-EWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNT 146
Query: 140 -CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKIIAPGDSISINTDG 198
C +MNIGF F+K S + + S +SK H L +F G I APGDS NTDG
Sbjct: 147 NCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSP--NTDG 204
Query: 199 IHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIGSLGTNPTEEPVE 258
I I KS+ ++I N I TGDDC+++ DG ++ I +V+CGPGHG S+GSLG E+ V+
Sbjct: 205 IKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQ 264
Query: 259 NIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVIIDQQYCPSNLCS 318
+ V+N + T +G+RIKTW + V+N +E+I M+NV NP++IDQQYCP C
Sbjct: 265 GLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCD 324
Query: 319 K--QSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDISLTFNGAPAM--A 374
+ S ++I +V + NI GTS +K+ + + CS PC+ VELS+I+L + G + A
Sbjct: 325 SPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLVTA 384
Query: 375 KCANVKPIIIGK 386
C NV I GK
Sbjct: 385 LCENVGGSIRGK 396
>At1g43100 hypothetical protein
Length = 444
Score = 272 bits (696), Expect = 2e-73
Identities = 148/385 (38%), Positives = 218/385 (56%), Gaps = 15/385 (3%)
Query: 14 FLLLLSGSAQSI---VFDIRTFGGAPN--SDITQAFLNAWKQACASTS-PSKIVISKATY 67
FL + S +I VF++R +G P+ +D AF + WK+AC S SKI + K +
Sbjct: 15 FLFIAVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGKF 74
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
+ V GP K PIE +DGT+ AP +P + W+ Y++ ++SG+GT DG+G
Sbjct: 75 YLGGVEFVGPYKNPIEFVIDGTLLAPANPRDIKQD-TWINFRYINNLSISGSGTLDGQGK 133
Query: 128 SAWKLQKACGAT-CSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKII 186
+W L T C + +M +GF F+ +S ++ +TS +SK H F G I
Sbjct: 134 YSWPLNDCHKNTNCPELAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTIT 193
Query: 187 APGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIG 246
APGDS NTDGI + +++ I N+NI TGDDC+++ G ++ I NVKCGPGHG S+G
Sbjct: 194 APGDSP--NTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVG 251
Query: 247 SLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVI 306
SLG N E+ V+++ V++ T +G+RIKTW ++ V+N +E+I M++V P+
Sbjct: 252 SLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPIN 311
Query: 307 IDQQYCPSNLC--SKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDIS 364
IDQ+YCP C K+ S ++I ++ KNI GTS V L CS PC+ VEL DI+
Sbjct: 312 IDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDIN 371
Query: 365 LTFNG---APAMAKCANVKPIIIGK 386
L G + A C NV + GK
Sbjct: 372 LKHTGLEKGHSTAMCENVDGSVRGK 396
>At2g15450 putative polygalacturonase
Length = 404
Score = 271 bits (693), Expect = 5e-73
Identities = 146/391 (37%), Positives = 224/391 (56%), Gaps = 15/391 (3%)
Query: 12 VLFLLLLSGSA-QSIVFDIRTFGGAPN--SDITQAFLNAWKQACASTS-PSKIVISKATY 67
+ F+++ S S + VF+++ G P+ +D AF + W +AC S SKI + K T+
Sbjct: 15 LFFIVVASRSTVRPKVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
Query: 68 KMNAVNVKGPCKAPIEIQVDGTIQAPTDPNALNGAFQWVTIGYVDYFTLSGNGTFDGRGA 127
+ V GPCK PIE +DGT+ AP +P+ + W+ Y++ ++SG+GT DG+G
Sbjct: 75 YLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIKQD-TWINFRYINNLSISGSGTLDGQGK 133
Query: 128 SAWKLQKA-CGATCSKRSMNIGFNFLKHSTVRSVTSKDSKFFHVTLLGCTNFTFDGFKII 186
+W C K +M +GF F+ +S ++ +TS +SK H +F G I
Sbjct: 134 QSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTIT 193
Query: 187 APGDSISINTDGIHIAKSTDVKILNSNIATGDDCVSLGDGNKHITIHNVKCGPGHGFSIG 246
APGDS NTDGI + ++++I ++NI TGDDC+++ G ++ I NV CGPGHG S+G
Sbjct: 194 APGDSP--NTDGIKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVG 251
Query: 247 SLGTNPTEEPVENIIVKNCTLTNTQNGVRIKTWPTAPGTSPVTNLTFEDITMVNVYNPVI 306
SLG N E+ V+++IV++ T +G+RIK W ++ V+N +E+I M++V P+
Sbjct: 252 SLGKNKDEKDVKDLIVRDVIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPIN 311
Query: 307 IDQQYCPSNLC--SKQSPSKIKISNVTFKNIKGTSETKDGVILNCSSGVPCEGVELSDIS 364
IDQ+YCP C ++ S ++I N+ KNI GTS+ K V L CS PC+ VEL DI+
Sbjct: 312 IDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDIN 371
Query: 365 LTFNG---APAMAKCANVKPIIIGK--APSC 390
+ NG + + C NV GK P C
Sbjct: 372 IKQNGVKDGSSTSVCENVDGFARGKMFPPHC 402
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.317 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,273,685
Number of Sequences: 26719
Number of extensions: 417595
Number of successful extensions: 1198
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 844
Number of HSP's gapped (non-prelim): 83
length of query: 392
length of database: 11,318,596
effective HSP length: 101
effective length of query: 291
effective length of database: 8,619,977
effective search space: 2508413307
effective search space used: 2508413307
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0490.17