BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0404.13
(247 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g18960 floral homeotic protein agamous 326 6e-90
At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1) 278 3e-75
At2g42830 MADS box transcription factor (AGL5) 275 1e-74
At4g09960 MADS-box protein AGL11 252 1e-67
At2g45650 MADS-box protein (AGL6) 161 3e-40
At2g03710 MADS-box protein (AGL3) 155 2e-38
At5g15800 transcription factor (AGL2) 153 9e-38
At1g26310 cauliflower (CAL) 153 9e-38
At4g22950 putative MADS Box / AGL protein 152 2e-37
At3g61120 MADS-box protein AGL13 152 2e-37
At5g62165 unknown protein 151 4e-37
At2g14210 pseudogene 151 4e-37
At5g60910 floral homeotic protein AGL8 150 5e-37
At3g02310 floral homeotic protein AGL4 150 6e-37
At1g24260 floral homeotic protein, AGL9 150 6e-37
At2g45660 MADS-box protein (AGL20) 148 3e-36
At4g11880 MADS-box protein AGL14 147 5e-36
At2g22630 MADS-box protein AGL17 (AGL17) 147 7e-36
At4g37940 MADS-box protein AGL17 -like protein 146 9e-36
At1g69120 unknown protein 145 1e-35
>At4g18960 floral homeotic protein agamous
Length = 284
Score = 326 bits (836), Expect = 6e-90
Identities = 165/247 (66%), Positives = 203/247 (81%), Gaps = 8/247 (3%)
Query: 8 MSANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSN 67
+ ++SP RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+
Sbjct: 39 LGGDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 98
Query: 68 RGRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQ 127
RGRLYEY+NNSVK +IERYKKA SD+S GS + NAQ+YQQE+AKLR QI ++QN NRQ
Sbjct: 99 RGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQ 158
Query: 128 MLGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
++GE + +M+ ++L+NLE +LE+ I+RIRSKKNE+LF+EI+YMQKRE+DLHN NQ+LRAK
Sbjct: 159 LMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAK 218
Query: 188 IAESDERKNHNFNMLPGTTNFESL----QQSQQPFDSRGFFQVTGLQPNN---NQCARQD 240
IAE +ER N + +++PG +N+E L Q QPFDSR +FQV LQPNN + RQD
Sbjct: 219 IAE-NERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQD 277
Query: 241 QISLQFV 247
Q +LQ V
Sbjct: 278 QTALQLV 284
>At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1)
Length = 248
Score = 278 bits (710), Expect = 3e-75
Identities = 151/251 (60%), Positives = 186/251 (73%), Gaps = 7/251 (2%)
Query: 1 MSSPNQSMSANNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 60
M S A +S +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 1 MEEGGSSHDAESS--KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 58
Query: 61 ALIVFSNRGRLYEYANNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISN 120
AL++FS RGRLYEYANNSV+ +IERYKKACSD+ S + AN Q+YQQEA+KLR QI +
Sbjct: 59 ALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRD 118
Query: 121 LQNHNRQMLGEALSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNS 180
+QN NR ++GE+L ++N ++LKNLE +LEKGISR+RSKKNE+L AEIEYMQKRE++L ++
Sbjct: 119 IQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHN 178
Query: 181 NQLLRAKIAESDERK--NHNFNMLPGTTNFES--LQQSQQPFDSRGFFQVTGLQPNNNQC 236
N LRAKIAE +++ GTT +ES Q +R + V L+P N Q
Sbjct: 179 NMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEP-NQQF 237
Query: 237 ARQDQISLQFV 247
+ QDQ LQ V
Sbjct: 238 SGQDQPPLQLV 248
>At2g42830 MADS box transcription factor (AGL5)
Length = 246
Score = 275 bits (704), Expect = 1e-74
Identities = 145/234 (61%), Positives = 179/234 (75%), Gaps = 3/234 (1%)
Query: 16 RKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 75
+K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FS RGRLYEYA
Sbjct: 14 KKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA 73
Query: 76 NNSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
NNSV+ +IERYKKACSD+ + + AN Q+YQQEA+KLR QI ++QN NR +LGE+L +
Sbjct: 74 NNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGS 133
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERK 195
+N ++LKNLE++LEKGISR+RSKK+EML AEIEYMQKREI+L N N LR+KI E +
Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQ 193
Query: 196 NHNFNMLPGTTNFES--LQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQFV 247
+++ T +ES Q +R + V L+PN N + QDQ LQ V
Sbjct: 194 QQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNS-SNQDQPPLQLV 246
>At4g09960 MADS-box protein AGL11
Length = 230
Score = 252 bits (644), Expect = 1e-67
Identities = 123/188 (65%), Positives = 154/188 (81%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS RGRLYEYANN
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
+++++IERYKKACSDS+ + NA +YQQE+AKLR QI +QN NR ++G++LS+++
Sbjct: 61 NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLS 120
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++LK +E +LEK ISRIRSKK+E+L EIE QKREI+L N N LR K+AE + + H
Sbjct: 121 VKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQH 180
Query: 198 NFNMLPGT 205
+ M+ G+
Sbjct: 181 HHQMVSGS 188
>At2g45650 MADS-box protein (AGL6)
Length = 252
Score = 161 bits (408), Expect = 3e-40
Identities = 92/229 (40%), Positives = 136/229 (59%), Gaps = 7/229 (3%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
++++IERY + C + S + Q + QE KL+ + +L NR +LGE L M
Sbjct: 61 GIESTIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++L+ LE +LE ++ R +K +++ E+E ++K+E L + N+ L+ K E + H
Sbjct: 120 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKF----ETEGH 175
Query: 198 NFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCARQDQISLQF 246
F + + P +S F V PN C + + + F
Sbjct: 176 AFKTFQDLWANSAASVAGDPNNSE--FPVEPSHPNVLDCNTEPFLQIGF 222
>At2g03710 MADS-box protein (AGL3)
Length = 257
Score = 155 bits (392), Expect = 2e-38
Identities = 90/222 (40%), Positives = 138/222 (61%), Gaps = 18/222 (8%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYAN- 76
MGRGK+E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAE+AL++FSNRG+LYE+ +
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 77 -NSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSN 135
+ + ++++Y+K S ++ + S + Q Q+ KL+ ++ LQ+ R +LGE LS
Sbjct: 61 PSGMARTVDKYRKH-SYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSE 119
Query: 136 MNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERK 195
M+ +L++LE +++ + +IRS K + ++ ++ +E L +N+ LR K+ +SD
Sbjct: 120 MDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAAL 179
Query: 196 NHNFNMLPGTTNFESLQQSQQ------------PFDSRGFFQ 225
+F G++ E QQ QQ P GFF+
Sbjct: 180 TQSF---WGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFK 218
>At5g15800 transcription factor (AGL2)
Length = 251
Score = 153 bits (386), Expect = 9e-38
Identities = 88/230 (38%), Positives = 137/230 (59%), Gaps = 8/230 (3%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S + +++RY+K S + + +E KL+ + NLQ R +LGE L +
Sbjct: 61 SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
N+++L+ LE +L+ + ++RS K + + ++ +Q +E L +N+ L K+ + ++
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180
Query: 197 HNFNMLPGTTNFE-SLQQSQQPFDSRGFFQVTGLQP------NNNQCARQ 239
H+ G E ++ + S+G +Q P +N C+ Q
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQ 230
>At1g26310 cauliflower (CAL)
Length = 255
Score = 153 bits (386), Expect = 9e-38
Identities = 90/241 (37%), Positives = 146/241 (60%), Gaps = 14/241 (5%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRR GLLKKA E+SVLCDAEV+LIVFS++G+L+EY++
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60
Query: 78 S-VKASIERYKK-ACSDSSGGGSTSGANAQF-YQQEAAKLRVQISNLQNHNRQMLGEALS 134
S ++ +ERY++ + ++ S NAQ + E ++L+ +I L+ + R LGE L
Sbjct: 61 SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120
Query: 135 NMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD-- 192
M+ +DL+NLE +LE + IRS+KN+++ + ++Q++E ++ N +L +I E +
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180
Query: 193 --------ERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQPNNNQCA-RQDQIS 243
E+ N + + +P F+ + F + GL +Q A R++ +
Sbjct: 181 LRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRNNLD 240
Query: 244 L 244
L
Sbjct: 241 L 241
>At4g22950 putative MADS Box / AGL protein
Length = 219
Score = 152 bits (383), Expect = 2e-37
Identities = 80/170 (47%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
M RGK E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVAL++FS R +LYE++++
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
S+ A+IERY++ + G N+Q + E + L +I L+ R++LGE + +
Sbjct: 61 SIAATIERYQRRIKE-IGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACS 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
+L+ LE +L++ +SRIR+KK ++L EIE ++ E +L N+ L+ K
Sbjct: 120 IEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>At3g61120 MADS-box protein AGL13
Length = 244
Score = 152 bits (383), Expect = 2e-37
Identities = 89/225 (39%), Positives = 138/225 (60%), Gaps = 9/225 (4%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGK+E+KRIEN RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS G+LYE++N
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
V +IERY + C D+ T + Q +QE KL+ + +L +R ++GE L M+
Sbjct: 61 GVGRTIERYYR-CKDNLLDNDTL-EDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMS 118
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++L+ LE +LE +S R +K +++ ++E ++++E +L + N L+ + + D +
Sbjct: 119 IKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ 178
Query: 198 NFNMLP----GTTNFESLQQSQQPFDS---RGFFQVTGLQPNNNQ 235
+ + P G + SLQ + Q + S G+F G Q + Q
Sbjct: 179 DLLLNPVLTAGCSTDFSLQSTHQNYISDCNLGYFLQIGFQQHYEQ 223
>At5g62165 unknown protein
Length = 210
Score = 151 bits (381), Expect = 4e-37
Identities = 72/170 (42%), Positives = 119/170 (69%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
M RGKIE+K+IEN T+RQVTF KRRNGLLKKAYELSVLCDA+++LI+FS RGRLYE++++
Sbjct: 1 MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
++ +IERY+K D S + Q +QEA+ + +I L+ H R++LG+ +++ +
Sbjct: 61 DMQKTIERYRKYTKDHETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIASCS 120
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
+L+ ++++L++ + ++R +K ++ ++E ++ +E L N L K
Sbjct: 121 LEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQK 170
>At2g14210 pseudogene
Length = 234
Score = 151 bits (381), Expect = 4e-37
Identities = 87/222 (39%), Positives = 138/222 (61%), Gaps = 10/222 (4%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA-N 76
MGRGKI I+RI+N+T+RQVTF KRR+GLLKKA ELS+LCDAEV +I+FS+ G+LY+YA N
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 77 NSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
+S+K IERY + + + +F+Q+E A L+ Q+ LQ +R+++GE LS M
Sbjct: 61 SSMKTIIERYNRV-KEEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELSGM 119
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEI-------EYMQKREIDLHNSNQLLRAKIA 189
NA DL+NLE +L + +R KK++++ EI + +QK +L N ++R +
Sbjct: 120 NANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENI 179
Query: 190 ESDERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQP 231
+ ++ + N + G ++ + + + + Q+ LQP
Sbjct: 180 KLQKKVHGRTNAIEGNSSVDPISNGTTTY-APPQLQLIQLQP 220
>At5g60910 floral homeotic protein AGL8
Length = 242
Score = 150 bits (380), Expect = 5e-37
Identities = 79/195 (40%), Positives = 127/195 (64%), Gaps = 1/195 (0%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S ++ +ERY + + ++ + E AKL+ ++ L+ + R +GE L ++
Sbjct: 61 SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 120
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
+ ++L++LE +L+ I IRS+KN+ +F I +QK++ L + N L KI E +++
Sbjct: 121 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTG 180
Query: 197 HNFNMLPGTTNFESL 211
L +N S+
Sbjct: 181 QQEGQLVQCSNSSSV 195
>At3g02310 floral homeotic protein AGL4
Length = 250
Score = 150 bits (379), Expect = 6e-37
Identities = 86/235 (36%), Positives = 139/235 (58%), Gaps = 7/235 (2%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LIVFSNRG+LYE+ +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60
Query: 78 S-VKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
S + ++ERY+K S + + +E KL+ + NLQ R +LGE L +
Sbjct: 61 SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKN 196
N+++L+ LE +L+ + ++R K + + ++ +Q +E L ++N+ L K+ + ++
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180
Query: 197 HNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQP------NNNQCARQDQISLQ 245
H+ + +++ S+G +Q P ++ C+ Q +++Q
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQ 235
>At1g24260 floral homeotic protein, AGL9
Length = 251
Score = 150 bits (379), Expect = 6e-37
Identities = 88/219 (40%), Positives = 134/219 (61%), Gaps = 7/219 (3%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY-AN 76
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FSNRG+LYE+ ++
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 77 NSVKASIERYKKACSDSSGGGSTSGANAQFY----QQEAAKLRVQISNLQNHNRQMLGEA 132
+S+ ++ERY+K C+ + + A QQE KL+ + LQ R +LGE
Sbjct: 61 SSMLRTLERYQK-CNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGED 119
Query: 133 LSNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD 192
L ++ ++L++LE +L+ + +IR+ + + + ++ +Q +E L +N+ LR ++A+
Sbjct: 120 LGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGY 179
Query: 193 ERKNHNFNMLPGTTNFESLQQSQQPFDSRGFFQVTGLQP 231
+ N + QQ S+ FFQ +P
Sbjct: 180 QMP-LQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEP 217
>At2g45660 MADS-box protein (AGL20)
Length = 214
Score = 148 bits (373), Expect = 3e-36
Identities = 79/183 (43%), Positives = 120/183 (65%), Gaps = 2/183 (1%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LI+FS +G+LYE+A++
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
+++ +I+RY + D S N Q + EAA + +I L+ R++LGE + +
Sbjct: 61 NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCS 120
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIA--ESDERK 195
+L+ +E +LEK + IR++K ++ +IE ++++E L N+ L K ES+
Sbjct: 121 IEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHESEVWS 180
Query: 196 NHN 198
N N
Sbjct: 181 NKN 183
>At4g11880 MADS-box protein AGL14
Length = 221
Score = 147 bits (371), Expect = 5e-36
Identities = 80/171 (46%), Positives = 118/171 (68%), Gaps = 2/171 (1%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEY-AN 76
M RGK E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ ++
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 77 NSVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNM 136
+S+ ++ERY+K D G N+Q + E L +I +L+ R+M+GE L
Sbjct: 61 SSIPKTVERYQKRIQD-LGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDAS 119
Query: 137 NARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAK 187
+ +L+ LE +L++ + +IR+KK ++L E E ++++E +L N++L K
Sbjct: 120 SIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170
>At2g22630 MADS-box protein AGL17 (AGL17)
Length = 227
Score = 147 bits (370), Expect = 7e-36
Identities = 76/194 (39%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGKI I++I+++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSN +LY++A++
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
SVK++IER+ A + + +F+Q+EA LR ++ +LQ + RQ+ G L+ ++
Sbjct: 61 SVKSTIERFNTAKMEEQ-ELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLS 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESDERKNH 197
++L+N+E++LE + IR K+ ++L EI+ + ++ +H+ N L K+ +
Sbjct: 120 VKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVE 179
Query: 198 NFNMLPGTTNFESL 211
+ GT+N L
Sbjct: 180 LYKKAYGTSNTNGL 193
>At4g37940 MADS-box protein AGL17 -like protein
Length = 228
Score = 146 bits (369), Expect = 9e-36
Identities = 74/171 (43%), Positives = 120/171 (69%), Gaps = 1/171 (0%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRGKI I+RI+++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ G+LY++A++
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 78 SVKASIERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEALSNMN 137
S+K+ I+RY K+ + + +F+Q+EAA LR ++ LQ ++RQM+GE L+ ++
Sbjct: 61 SMKSVIDRYNKSKIEQQ-QLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLS 119
Query: 138 ARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKI 188
+L +LE ++E + IR +K ++L EI+ + ++ +H N L K+
Sbjct: 120 VNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV 170
>At1g69120 unknown protein
Length = 256
Score = 145 bits (367), Expect = 1e-35
Identities = 81/200 (40%), Positives = 122/200 (60%), Gaps = 17/200 (8%)
Query: 18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYANN 77
MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVAL+VFS++G+L+EY+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 78 SVKASI----ERYKKACSDSSGGGSTSGANAQFYQQEAAKLRVQISNLQNHNRQMLGEAL 133
S I ERY A S N + E +L+ +I L+ + R LGE L
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTN---WSMEYNRLKAKIELLERNQRHYLGEDL 117
Query: 134 SNMNARDLKNLETKLEKGISRIRSKKNEMLFAEIEYMQKREIDLHNSNQLLRAKIAESD- 192
M+ ++L+NLE +L+ + IR++KN++++ I +QK+E + N +L +I E +
Sbjct: 118 QAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK 177
Query: 193 ---------ERKNHNFNMLP 203
+++N NM P
Sbjct: 178 ILRAQQEQWDQQNQGHNMPP 197
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.128 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,978,628
Number of Sequences: 26719
Number of extensions: 191787
Number of successful extensions: 673
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 136
length of query: 247
length of database: 11,318,596
effective HSP length: 97
effective length of query: 150
effective length of database: 8,726,853
effective search space: 1309027950
effective search space used: 1309027950
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0404.13