BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0403.5
(44 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64030 ankyrin-like protein 69 4e-13
At3g51070 putative protein 65 9e-12
At1g29470 unknown protein 65 9e-12
At2g34300 unknown protein 62 7e-11
At2g40280 unknown protein 57 1e-09
At3g56080 unknown protein (At3g56080) 50 2e-07
At4g14360 45 9e-06
At3g23300 ankyrin repeat protein 45 9e-06
At5g14430 unknown protein 44 1e-05
At1g04430 unknown protein 44 2e-05
At5g06050 ankyrin-like protein 42 6e-05
At1g77260 unknown protein 41 1e-04
At2g39750 unknown protein 41 1e-04
At1g19430 unknown protein (F18O14.20) 38 0.001
At5g04060 putative protein 37 0.001
At3g10200 unknown protein 37 0.001
At1g78240 unknown protein 36 0.003
At4g19120 ERD3 protein (ERD3) 34 0.016
At4g18030 unknown protein 32 0.048
At1g31850 unknown protein 32 0.048
>At5g64030 ankyrin-like protein
Length = 829
Score = 69.3 bits (168), Expect = 4e-13
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSLL 42
GKLLLELNRVLRPGGFFVWS TPVY K EDVEI MS L+
Sbjct: 504 GKLLLELNRVLRPGGFFVWSATPVYQKKTEDVEIWKAMSELI 545
>At3g51070 putative protein
Length = 895
Score = 64.7 bits (156), Expect = 9e-12
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSL 41
G LLLELNR+LRPGG+FVWS TPVY KL EDV+I MS+L
Sbjct: 577 GMLLLELNRMLRPGGYFVWSATPVYQKLEEDVQIWKEMSAL 617
>At1g29470 unknown protein
Length = 768
Score = 64.7 bits (156), Expect = 9e-12
Identities = 31/41 (75%), Positives = 31/41 (75%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSL 41
GKLLLELNR LRPGGFFVWS TPVY K EDV I MS L
Sbjct: 444 GKLLLELNRALRPGGFFVWSATPVYRKTEEDVGIWKAMSKL 484
>At2g34300 unknown protein
Length = 770
Score = 61.6 bits (148), Expect = 7e-11
Identities = 30/41 (73%), Positives = 30/41 (73%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSL 41
GKLLLELNR LRPGGFFVWS TPVY K ED I MS L
Sbjct: 446 GKLLLELNRALRPGGFFVWSATPVYRKNEEDSGIWKAMSEL 486
>At2g40280 unknown protein
Length = 589
Score = 57.4 bits (137), Expect = 1e-09
Identities = 28/41 (68%), Positives = 29/41 (70%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSL 41
GK LLELNRVLRPGGFF+WS TPVY D I N M SL
Sbjct: 286 GKPLLELNRVLRPGGFFIWSATPVYRDNDRDSRIWNEMVSL 326
>At3g56080 unknown protein (At3g56080)
Length = 357
Score = 50.4 bits (119), Expect = 2e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVY 25
G+ LLELNRVLRPGGFFVWS TPVY
Sbjct: 57 GRPLLELNRVLRPGGFFVWSATPVY 81
Score = 25.0 bits (53), Expect = 7.6
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 2 KLLLELNRVLRPGGFF-VWSTTPVYHKL 28
++++E++R+LRPGG+ V T + KL
Sbjct: 302 EVVVEIDRILRPGGYLAVQDTVEMLKKL 329
>At4g14360
Length = 608
Score = 44.7 bits (104), Expect = 9e-06
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSLL 42
G LLLEL+RVLRPGG+F +S+ Y + ED+ I MS+L+
Sbjct: 289 GILLLELDRVLRPGGYFAYSSPEAYAQDEEDLRIWREMSALV 330
Score = 27.3 bits (59), Expect = 1.5
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 3 LLLELNRVLRPGGFFV 18
LLLE++R+LRP GF +
Sbjct: 536 LLLEMDRILRPSGFII 551
>At3g23300 ankyrin repeat protein
Length = 611
Score = 44.7 bits (104), Expect = 9e-06
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSLL 42
G LLLEL+RVLRPGG+F +S+ Y + ED+ I MS+L+
Sbjct: 292 GILLLELDRVLRPGGYFAYSSPEAYAQDEEDLRIWREMSALV 333
Score = 26.6 bits (57), Expect = 2.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 3 LLLELNRVLRPGGFFV 18
LLLE++R+LRP GF +
Sbjct: 539 LLLEMDRILRPSGFIL 554
>At5g14430 unknown protein
Length = 612
Score = 44.3 bits (103), Expect = 1e-05
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSL 41
G LLLEL+R+LRPGG+FV+S+ Y PE+ +I N M L
Sbjct: 293 GILLLELDRLLRPGGYFVYSSPEAYAHDPENRKIGNAMHDL 333
Score = 25.4 bits (54), Expect = 5.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 3 LLLELNRVLRPGGFFV 18
LL+E++R+LRP GF +
Sbjct: 540 LLIEMDRILRPEGFVI 555
>At1g04430 unknown protein
Length = 623
Score = 43.5 bits (101), Expect = 2e-05
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSLL 42
G LLLEL+RVLRPGG+F +S+ Y + E+++I MS+L+
Sbjct: 297 GLLLLELDRVLRPGGYFAYSSPEAYAQDEENLKIWKEMSALV 338
Score = 25.4 bits (54), Expect = 5.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 3 LLLELNRVLRPGGFFV 18
LL+E++R+LRP GF +
Sbjct: 544 LLIEMDRILRPTGFVI 559
>At5g06050 ankyrin-like protein
Length = 682
Score = 42.0 bits (97), Expect = 6e-05
Identities = 22/46 (47%), Positives = 29/46 (62%), Gaps = 3/46 (6%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVY---HKLPEDVEICNGMSSLLC 43
G LLLE+NR+LR GG+FVW+ PVY L E E +++ LC
Sbjct: 356 GILLLEVNRMLRAGGYFVWAAQPVYKHEKALEEQWEEMLNLTTRLC 401
Score = 25.4 bits (54), Expect = 5.8
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 3 LLLELNRVLRPGG-FFVWSTTPVYHKLPE 30
++LE++R+LRPGG ++ T V +L E
Sbjct: 604 MMLEMDRILRPGGRVYIRDTINVTSELQE 632
>At1g77260 unknown protein
Length = 655
Score = 41.2 bits (95), Expect = 1e-04
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVY 25
G LLLE+NR+LR GG+FVW+ PVY
Sbjct: 348 GILLLEVNRMLRAGGYFVWAAQPVY 372
>At2g39750 unknown protein
Length = 694
Score = 40.8 bits (94), Expect = 1e-04
Identities = 17/29 (58%), Positives = 21/29 (71%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLP 29
G LLLE+NR+LR GG+F W+ PVY P
Sbjct: 384 GILLLEINRMLRAGGYFAWAAQPVYKHEP 412
Score = 25.4 bits (54), Expect = 5.8
Identities = 9/13 (69%), Positives = 13/13 (99%)
Query: 3 LLLELNRVLRPGG 15
+LLE++R+LRPGG
Sbjct: 632 ILLEMDRILRPGG 644
>At1g19430 unknown protein (F18O14.20)
Length = 724
Score = 37.7 bits (86), Expect = 0.001
Identities = 18/43 (41%), Positives = 28/43 (64%), Gaps = 3/43 (6%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPEDVEICNGMSSLLC 43
GKLLLE+NR+LRP G+F+ S+ + ED E +++ +C
Sbjct: 425 GKLLLEMNRILRPNGYFILSSN---NDKIEDDEAMTALTASIC 464
>At5g04060 putative protein
Length = 600
Score = 37.4 bits (85), Expect = 0.001
Identities = 15/27 (55%), Positives = 20/27 (73%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHK 27
G L+ E+NR+LRP G+FV+S P Y K
Sbjct: 295 GVLMKEVNRLLRPNGYFVYSAPPAYRK 321
>At3g10200 unknown protein
Length = 591
Score = 37.4 bits (85), Expect = 0.001
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHK 27
G LL E++R+LRP GFFV+S+ P Y K
Sbjct: 284 GILLKEVHRLLRPNGFFVYSSPPAYRK 310
>At1g78240 unknown protein
Length = 684
Score = 36.2 bits (82), Expect = 0.003
Identities = 16/31 (51%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHKLPED 31
G LL+E++RVL+PGG+FVW T+P+ + +D
Sbjct: 355 GLLLVEIDRVLKPGGYFVW-TSPLTNPRNKD 384
>At4g19120 ERD3 protein (ERD3)
Length = 600
Score = 33.9 bits (76), Expect = 0.016
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHK 27
G LLE++R+LRPGGF+V S PV ++
Sbjct: 274 GVYLLEVHRILRPGGFWVLSGPPVNYE 300
>At4g18030 unknown protein
Length = 621
Score = 32.3 bits (72), Expect = 0.048
Identities = 14/27 (51%), Positives = 20/27 (73%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPVYHK 27
G L+E++RVLRPGG++V S P+ K
Sbjct: 288 GTYLMEVDRVLRPGGYWVLSGPPINWK 314
>At1g31850 unknown protein
Length = 603
Score = 32.3 bits (72), Expect = 0.048
Identities = 14/24 (58%), Positives = 19/24 (78%)
Query: 1 GKLLLELNRVLRPGGFFVWSTTPV 24
G LLE++R++RPGGF+V S PV
Sbjct: 280 GIYLLEIHRIVRPGGFWVLSGPPV 303
Score = 25.0 bits (53), Expect = 7.6
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 3 LLLELNRVLRPGGFFV 18
+LLE++R+LRP G+ +
Sbjct: 537 ILLEMDRILRPSGYVI 552
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.325 0.146 0.474
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,125,634
Number of Sequences: 26719
Number of extensions: 28680
Number of successful extensions: 157
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 61
length of query: 44
length of database: 11,318,596
effective HSP length: 20
effective length of query: 24
effective length of database: 10,784,216
effective search space: 258821184
effective search space used: 258821184
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0403.5