BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0378b.13
         (282 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g36170 acetyl-CoA carboxylase, putative, 5' partial                200  8e-52
At1g36180 acetyl-CoA carboxylase, putative                            199  1e-51
At1g36160 hypothetical protein, 3' partial                            194  6e-50
At5g55070 2-oxoglutarate dehydrogenase E2 subunit                      29  3.2

>At1g36170 acetyl-CoA carboxylase, putative, 5' partial
          Length = 1865

 Score =  200 bits (508), Expect = 8e-52
 Identities = 139/262 (53%), Positives = 161/262 (61%), Gaps = 10/262 (3%)

Query: 4   LLQLDGNNHVIYLEEEAAGTCLLIDGRAFLLQNDHDP*KLCGFYLFLLWLWLVSKPLSFA 63
           L+QLDG +HVIY EEEAAGT LLIDGR  LLQNDHDP KL       L  +L+S   S  
Sbjct: 258 LMQLDGKSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLMAETPCKLMRYLISDN-SNI 316

Query: 64  E*S*PYAEVEVIKMCMPLLSPASEIIQFKISEGQEMQACELIARLDLDDPSAVRKAEPF* 123
           +   PYAEVEV+KMCMPLLSPAS +I FK+SEGQ MQA ELIA LDLDDPSAVRKAEPF 
Sbjct: 317 DADTPYAEVEVMKMCMPLLSPASGVIHFKMSEGQAMQAGELIANLDLDDPSAVRKAEPFH 376

Query: 124 SWALLLQFLVKFNRNVPQ--A*ILH--R*FLLAMSTNMMR*LCKV*SIVYSPEFPFLQW* 179
                L      +  V Q  A  L+  R  L      +   +  + + + SPE PFLQW 
Sbjct: 377 GSFPRLGLPTAISGRVHQRCAATLNAARMILAGYEHKVDEVVQDLLNCLDSPELPFLQWQ 436

Query: 180 ECFAVVATRLCKVLATHLPIDLKN*FPSRGFQAPKFLTFAKLLKGNLEAHISSCPDKEKG 239
           ECFAV+ATRL K L   L    +  F S    +      AKLLKG LEAH+SSC +KE+G
Sbjct: 437 ECFAVLATRLPKNLRNMLESKYRE-FESISRNSLTTDFPAKLLKGILEAHLSSCDEKERG 495

Query: 240 AQERLK*P----D*SCEGGRET 257
           A ERL  P      S EGGRE+
Sbjct: 496 ALERLIEPLMSLAKSYEGGRES 517


>At1g36180 acetyl-CoA carboxylase, putative
          Length = 2359

 Score =  199 bits (506), Expect = 1e-51
 Identities = 138/263 (52%), Positives = 163/263 (61%), Gaps = 12/263 (4%)

Query: 4    LLQLDGNNHVIYLEEEAAGTCLLIDGRAFLLQNDHDP*KLCGFYLFLLWLWLVSKPLSFA 63
            L+QLDG +HVIY +EEA GT LLIDGR  LLQNDHDP KL       L  +LVS   S  
Sbjct: 753  LMQLDGKSHVIYAKEEATGTRLLIDGRTCLLQNDHDPSKLMAETPCKLLRYLVSDNSSID 812

Query: 64   E*S*PYAEVEVIKMCMPLLSPASEIIQFKISEGQEMQACELIARLDLDDPSAVRKAEPF* 123
              + PYAEVEV+KMCMPL+SPAS +I FK+SEGQ MQA ELIA+LDLDDPSAVRKA+PF 
Sbjct: 813  TDT-PYAEVEVMKMCMPLISPASGVIHFKLSEGQAMQAGELIAKLDLDDPSAVRKAKPFR 871

Query: 124  SWALLLQFLVKFNRNVPQ--A*ILH--R*FLLAMSTNMMR*LCKV*SIVYSPEFPFLQW* 179
                 L      +  V Q  A  L+  R  L      +   L  + + + SPE PFLQW 
Sbjct: 872  GSFPRLGLPTAISGKVHQRCAATLNAARMILAGYDHKVDEVLQDLLNCLDSPELPFLQWQ 931

Query: 180  ECFAVVATRLCKVLATHLPIDLKN-*FPSRGFQAPKFLTFAKLLKGNLEAHISSCPDKEK 238
            ECFAV+ATRL K L   L +  K     S+    P F   AKLLKG LEAH+SSC +KE+
Sbjct: 932  ECFAVLATRLPKDLRNMLELKYKEFEIISKTSLTPDFP--AKLLKGILEAHLSSCDEKER 989

Query: 239  GAQERLK*P----D*SCEGGRET 257
            G+ ERL  P      S EGGRE+
Sbjct: 990  GSLERLIEPLMSLVKSYEGGRES 1012


>At1g36160 hypothetical protein, 3' partial
          Length = 2252

 Score =  194 bits (492), Expect = 6e-50
 Identities = 137/269 (50%), Positives = 161/269 (58%), Gaps = 16/269 (5%)

Query: 4   LLQLDGNNHVIYLEEEAAGTCLLIDGRAFLLQNDHDP*KLCGFYLFLLWLWLVSKPLSFA 63
           L+QLDG +HVIY EEEAAGT LLIDGR  LLQNDHDP KL       L  +L+S   S  
Sbjct: 640 LMQLDGKSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLMAETPCKLMRYLISDN-SNI 698

Query: 64  E*S*PYAEVEVIKMCMPLLSPASEIIQFKISEGQEMQACELIARLDLDDPSAVRKAEPF* 123
           +   PYAEVEV+KMCMPLLSPAS +I FK+SEGQ MQA ELIA LDLDDPSAVRKAEPF 
Sbjct: 699 DADTPYAEVEVMKMCMPLLSPASGVIHFKMSEGQAMQAGELIANLDLDDPSAVRKAEPFH 758

Query: 124 SWALLLQFLVKFNRNVPQA*ILHR*FLLAMSTNMMR*LCKV*SIVY-------SPEFPFL 176
                L      +  V Q           +       + +V ++V        SPE PFL
Sbjct: 759 GSFPRLGLPTAISGRVHQRCAATLNAARMILAGYEHKVDEVNTVVQDLLNCLDSPELPFL 818

Query: 177 QW*ECFAVVATRLCKVLATHL-PIDLKN*FPSRGFQAPKFLTF---AKLLKGNLEAHISS 232
           QW ECFAV+ATRL K L   +    L++ +      +   LT    AKLLKG LEAH+SS
Sbjct: 819 QWQECFAVLATRLPKNLRNMVNTCVLESKYREFESISRNSLTTDFPAKLLKGILEAHLSS 878

Query: 233 CPDKEKGAQERLK*P----D*SCEGGRET 257
           C +KE+GA ERL  P      S EGGRE+
Sbjct: 879 CDEKERGALERLIEPLMSLAKSYEGGRES 907


>At5g55070 2-oxoglutarate dehydrogenase E2 subunit
          Length = 464

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 56  VSKPLSFAE*S*PYAEVEVIKMCMPLLSPASEIIQ-FKISEGQEMQACELIARL 108
           + KP    E     A++E  K+ + + SPAS +IQ F + EG  ++    +AR+
Sbjct: 114 LKKPGDRVEADEAIAQIETDKVTIDIASPASGVIQEFLVKEGDTVEPGNKVARI 167


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.359    0.161    0.584 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,482,438
Number of Sequences: 26719
Number of extensions: 202876
Number of successful extensions: 724
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 7
length of query: 282
length of database: 11,318,596
effective HSP length: 98
effective length of query: 184
effective length of database: 8,700,134
effective search space: 1600824656
effective search space used: 1600824656
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 59 (27.3 bits)