BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0369c.3
(975 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62960 1-aminocyclopropane-1-carboxylate synthase- like protein 37 0.054
At4g17330 G2484-1 protein 36 0.12
At2g22720 unknown protein 34 0.35
At3g08550 unknown protein 33 0.78
At5g19490 putative protein 32 1.3
At1g01550 Unknown protein (F22L4.9) 32 1.3
At4g25190 putative protein 31 3.0
At3g49720 unknown protein 31 3.0
At1g43850 SEUSS transcriptional co-regulator 31 3.0
At5g65810 unknown protein 31 3.9
At5g52280 hyaluronan mediated motility receptor-like protein 31 3.9
At5g07530 glycine-rich protein atGRP-7 31 3.9
At4g03000 putative protein 31 3.9
At1g70340 unknown protein 31 3.9
At4g34440 serine/threonine protein kinase - like 30 5.1
At3g54430 putative protein 30 5.1
At3g28840 unknown protein 30 6.6
At1g77800 putative phorbol ester / diacylglycerol binding protein 30 6.6
At5g43670 protein transport protein SEC23 30 8.7
At4g27520 early nodulin-like 2 predicted GPI-anchored protein 30 8.7
>At1g62960 1-aminocyclopropane-1-carboxylate synthase- like protein
Length = 557
Score = 37.0 bits (84), Expect = 0.054
Identities = 26/84 (30%), Positives = 39/84 (45%), Gaps = 4/84 (4%)
Query: 65 SRPTSSANNSSPGRGGGGNVSRNGSAMSLMSGLGSYASLFPGQCIPVTLFVFVDDF--SN 122
SR ++S ++ + G GGG + + L + LF G IP F F+ + N
Sbjct: 9 SRSSNSDSDKNSGNVGGGRTTGMRVIVPLQGVVQGRGGLFLGSVIPCAFFYFLQFYLKRN 68
Query: 123 LSN--SSTNGEESSDVSSLSQSNS 144
N S +GE++S SS S NS
Sbjct: 69 RKNDESDNSGEQNSSASSSSSPNS 92
>At4g17330 G2484-1 protein
Length = 2037
Score = 35.8 bits (81), Expect = 0.12
Identities = 43/197 (21%), Positives = 79/197 (39%), Gaps = 15/197 (7%)
Query: 141 QSNSMSSAAKANLPAKVSGSVVMLARPASRSEGGFRKKLQASLEAQIRFLIKKCHT-LSG 199
QS + S+ +K + + +VV A+ ++R + RKK+ S+E+ L T L+
Sbjct: 1151 QSGTSSNVSKVTPTLEPTSTVVAPAQHSTRVKSRKRKKMPVSVESGPNILNSLKQTELAA 1210
Query: 200 SEITHSGVRTGGTSTSAPLFSLDASRAVVLLDRFSNLKGESLE-------FATGLVEDVL 252
S + +A S V +D S G+ ++ F LV +V
Sbjct: 1211 SPLVPFTPTPANLGYNAGTLPSVVSMTAVPMDLVSTFPGKKIKSSFPSPIFGGNLVREVK 1270
Query: 253 NGKATSDSLLLESHGQSANKEDL-------ISVKEFIYRQSDILRGRGGIVNSNSGSAAG 305
S+ + + + ED +S E++++Q + G + A+
Sbjct: 1271 QRSVLSEDTIEKLKEAKMHAEDASALATAAVSHSEYVWKQIEQQSHAGLQPETQDRLASA 1330
Query: 306 VGMVAVAAAAAAASAAS 322
+A AAA A A+AA+
Sbjct: 1331 AVAIAAAAAVAKAAAAA 1347
>At2g22720 unknown protein
Length = 340
Score = 34.3 bits (77), Expect = 0.35
Identities = 47/162 (29%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 22 GSRFDTRVLRNFRVLQAAKHAMAPFAKSQTMPPLPSRSH---SSLSSRPTSSANNSSPGR 78
GS+ +N R A A S + P S S SS S RP SS N +P R
Sbjct: 52 GSQMQNSRPQNSRPASAGSQMQQRPASSGSQRPASSGSQRPASSGSQRPGSSTNRQAPMR 111
Query: 79 GGGGNVSRNGSAMSLMSGLGSYASLFPGQCIPVTLFVFVDDFSNLSN--------SSTNG 130
G + NG + + L S + + P V VD +S+ S+TN
Sbjct: 112 PPGSGSTMNGQSANRNGQLNSRSD--SRRSAPAK--VPVDHRKQMSSSNGVGPGRSATNA 167
Query: 131 EESSDVSSLSQSNSMSSAAKANL--PAKVSGSVVMLARPASR 170
SSL + S+ SA K++L P + S S M + P R
Sbjct: 168 RPLPSKSSLERKPSI-SAGKSSLQSPQRPSSSRPMSSDPRQR 208
>At3g08550 unknown protein
Length = 533
Score = 33.1 bits (74), Expect = 0.78
Identities = 24/69 (34%), Positives = 36/69 (51%), Gaps = 1/69 (1%)
Query: 121 SNLSNSSTNGEESSDVSSLSQSNSMSSAAKANLPAKVSGSVVMLARPASRSEGGFRKKLQ 180
S +S++STN + +SS+ +SNS S A +LP+K S S + AR +E
Sbjct: 462 SVVSSASTNLSKKKFLSSIHKSNSSRSTASESLPSKESKSEGISARHLLEAESAIPPLSP 521
Query: 181 ASLEAQIRF 189
+E Q RF
Sbjct: 522 PGME-QARF 529
>At5g19490 putative protein
Length = 236
Score = 32.3 bits (72), Expect = 1.3
Identities = 29/89 (32%), Positives = 36/89 (39%), Gaps = 8/89 (8%)
Query: 799 CPRGHRFLLNARHLNELGSSYSL-----LEESCISSSMEPASINQAYHSRVSKNASWAKV 853
C RG R R GS SL LE+ SS P+ N S + SW KV
Sbjct: 103 CGRGRRGRGRGRSSGRTGSGLSLKFEEDLEDGSPESSRTPSPENG---SLSHDDTSWKKV 159
Query: 854 HQSSNEIPPASTNKERDADKSNEMMPNGD 882
+N S K R+ D + E+ NGD
Sbjct: 160 ASHNNHHSSNSEVKVRNFDLNVELDENGD 188
>At1g01550 Unknown protein (F22L4.9)
Length = 349
Score = 32.3 bits (72), Expect = 1.3
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 539 SCFSDCDKLLPSVKLPEIEVAGPVQSSAWSLLRIGSAKYYESSKGLLQSGFCATEKNLLK 598
+C + L+ ++ LP+++ + + +L + Y S G+ + F + +NL+
Sbjct: 166 NCRAILSSLVQTLNLPKVKNSAKGKVLMRALYGVKVKTLYIS--GVFAAAFSGSSQNLMY 223
Query: 599 WTV---------YLEKQKRPNGSTETIVKQSSVIREPKVEHIADTKKTGVRKPHPAVQNG 649
TV ++E Q N + I + ++E +A +GV+K +PA+Q G
Sbjct: 224 LTVSNELPWAQSFMEVQNTMNAEIKNIFLSDGLTVLKELEAVA----SGVKKLYPAIQQG 279
Query: 650 GGDQRTSLGISKDDDKKISFG 670
D SL KD ++S G
Sbjct: 280 SIDP-ISLQPLKDSVTELSNG 299
>At4g25190 putative protein
Length = 443
Score = 31.2 bits (69), Expect = 3.0
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 109 IPVTLFVFVDDFSNLSNSSTNGEESSDVS-SLSQSNSMSSAAKANLPAKVSGSVVMLARP 167
+PV+L + ++ S+SS+ S V + SQS + SS + +K +++
Sbjct: 27 LPVSLNASLSSSTSSSSSSSPSNSSKRVMITRSQSTTRSSRPIGSSDSKSGENIIPARNS 86
Query: 168 ASRSEGGFRKKLQASLEAQIRFLIKKCHTLSGSEITHSGVRTGGTSTSA 216
ASRS+ S E+ R+L ++ S + GV+ G +S SA
Sbjct: 87 ASRSQ---EINNGRSRESFARYLEQRTRGSPRSNASSRGVKPGASSPSA 132
>At3g49720 unknown protein
Length = 261
Score = 31.2 bits (69), Expect = 3.0
Identities = 19/56 (33%), Positives = 32/56 (56%), Gaps = 2/56 (3%)
Query: 529 DPFDFESADASCFSDCDKLLPSVKLPEIEVAGPVQSSAWSLLRIGSAKYYESSKGL 584
+P+D E AD+ C S K L V++ +I+ P ++ ++SL+ + A Y S K L
Sbjct: 120 EPYDIEDADSHCKSFVSKGL--VRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYL 173
>At1g43850 SEUSS transcriptional co-regulator
Length = 877
Score = 31.2 bits (69), Expect = 3.0
Identities = 18/48 (37%), Positives = 28/48 (57%), Gaps = 2/48 (4%)
Query: 47 AKSQTMPPLPSRSHSSLSS--RPTSSANNSSPGRGGGGNVSRNGSAMS 92
+ S TM P S+ +L + PTSS+NN++P + G +V+ GS S
Sbjct: 691 SSSGTMVPSSSQQQHNLPTFQSPTSSSNNNNPSQNGIPSVNHMGSTNS 738
>At5g65810 unknown protein
Length = 258
Score = 30.8 bits (68), Expect = 3.9
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 529 DPFDFESADASCFSDCDKLLPSVKLPEIEVAGPVQSSAWSLLRIGSAKYYESSKGL 584
+P+D E AD++C S K L V++ +I+ P +S ++SL+ + A Y S + L
Sbjct: 117 EPYDVEDADSNCKSLLHKGL--VRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYL 170
>At5g52280 hyaluronan mediated motility receptor-like protein
Length = 853
Score = 30.8 bits (68), Expect = 3.9
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 644 PAVQNGGGDQRTSLGISKDDDKKISFGRGFPIFKMRKPFSEVVAGSAAVDSGFPPLQQRK 703
PA +NG T S D+ R P ++ FS V S P+++ K
Sbjct: 218 PATRNGHRRSNTDWSASSTSDESYIESRNSPENSFQRGFSSVTESS-------DPIERLK 270
Query: 704 LPASGSEKGMKLSKPSNQNGERVNAAVDYEISQKSQDILLTEGSLDGS 751
+ + +LS+ Q+ + I + S+++ +G DG+
Sbjct: 271 MELEALRRQSELSELEKQSLRKQAIKESKRIQELSKEVSCLKGERDGA 318
>At5g07530 glycine-rich protein atGRP-7
Length = 543
Score = 30.8 bits (68), Expect = 3.9
Identities = 44/179 (24%), Positives = 61/179 (33%), Gaps = 26/179 (14%)
Query: 48 KSQTMPPLPSRSHSSLSSRPTSSANNSSPGRGGGGNVSRNGSAMSLMSGLGSYASLFPGQ 107
K + L + S S + S G GGG L + LG + G
Sbjct: 247 KGKLKAKLEKKKGMSGGSESEEGMSGSEGGMSGGGGSKSKSKKSKLKAKLGKKKGMSGGM 306
Query: 108 CIPVTLFVFVDDFSNLSNSSTNGEESSDVSSLSQSNSMSSAAKANLPAKVSGSVVMLARP 167
S S + G SS S S+S AK +SG +
Sbjct: 307 -----------SGSEEGMSGSEGGMSSGGGSKSKSKKSKLKAKLGKKKSMSGGMSGSEEG 355
Query: 168 ASRSEGGF-------RKKLQASLEAQIRFLIKKCHT--LSGSE----ITHSGVRTGGTS 213
S SEGG K ++ L+A + KKC + +SGSE + G+ GG S
Sbjct: 356 MSGSEGGMSGGGGGKSKSRKSKLKANLG--KKKCMSGGMSGSEGGMSRSEGGISGGGMS 412
>At4g03000 putative protein
Length = 864
Score = 30.8 bits (68), Expect = 3.9
Identities = 27/85 (31%), Positives = 35/85 (40%), Gaps = 9/85 (10%)
Query: 682 FSEVVAGSAAVDSGFPPLQQRKLPASGSEKGMKLSKPSNQNGERVNAAVDYEI-SQKSQD 740
F V G S P Q + G + KL+ PS QN + YE+ S KSQ
Sbjct: 11 FGAVNGGKVGTSSSVSPPQDK-----GRKNKRKLADPSPQNAASLTEFPRYELHSFKSQS 65
Query: 741 ILL---TEGSLDGSGNNSCRDDDPF 762
L + G L ++S DDPF
Sbjct: 66 PLCENDSNGQLKAEESDSVGWDDPF 90
>At1g70340 unknown protein
Length = 510
Score = 30.8 bits (68), Expect = 3.9
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 60 HSSLSSRPTSSANNSSPGRGGGGNVSRNGSAMSLMSGLGSYASLFPGQCIPVTLFVF--- 116
HS+ + R S+ +SP R GG S G + + G ++ C + F
Sbjct: 161 HSTPAKRSVSARFAASPIRRGGVRCSFGGGVLGKLEGESPATAMLRKSCFVSSASKFPRS 220
Query: 117 ---VDDFSNLSNSS------TNGEESSDVSSLSQSNSMSSAAKANLPAKVSGSVVMLARP 167
D + +N+S ++ E DV LS S + NL SG + +L++
Sbjct: 221 RSVCDRQAKKNNASLFSPFKSSLEAQEDVVPLSTSKKIKPEKDTNL----SGRLNILSKE 276
Query: 168 ASR-SEGGFRKKLQASLEAQIRFLIKKCHTLSGSEITHS 205
A++ E + LQA EA I ++ + HT + + ++ S
Sbjct: 277 ATQLREVAQKVALQALREATITEIVVR-HTKTFTNLSKS 314
>At4g34440 serine/threonine protein kinase - like
Length = 670
Score = 30.4 bits (67), Expect = 5.1
Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Query: 44 APFAKSQTMPPLPSRSHSSLS-SRPT--SSANNSSPGRGGGGNVSRNGSAMS 92
AP + PP P ++ S+ S RPT S N R GGN +R+GS S
Sbjct: 94 APEGSTPVTPPAPPQTPSNQSPERPTPPSPGANDDRNRTNGGNNNRDGSTPS 145
>At3g54430 putative protein
Length = 183
Score = 30.4 bits (67), Expect = 5.1
Identities = 23/72 (31%), Positives = 34/72 (46%), Gaps = 2/72 (2%)
Query: 137 SSLSQSNSMSSAAKANLPA--KVSGSVVMLARPASRSEGGFRKKLQASLEAQIRFLIKKC 194
SS ++S+S S K L + S +V +L SR E GFR+ L +EA F +
Sbjct: 79 SSATRSSSSPSERKKKLKIDKQSSPNVSLLPTTTSRQERGFREGLPGKIEAPAVFKRTRV 138
Query: 195 HTLSGSEITHSG 206
+S +E G
Sbjct: 139 TAISNNEQAEIG 150
>At3g28840 unknown protein
Length = 391
Score = 30.0 bits (66), Expect = 6.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 293 GGIVNSNSGSAAGVGMVAVAAAAAAASAASG 323
GG + +G+AAG G A A AAA + A+G
Sbjct: 298 GGTTAAGAGAAAGAGAAAGAGAAAGGTTAAG 328
>At1g77800 putative phorbol ester / diacylglycerol binding protein
Length = 1506
Score = 30.0 bits (66), Expect = 6.6
Identities = 58/242 (23%), Positives = 98/242 (39%), Gaps = 41/242 (16%)
Query: 118 DDFSNLSNSSTNGEESSDVSSLSQSNSMSSAAKANLPAKVSGSVV-MLARPA-------- 168
DD SNSS++G + SL + NS + N P + + A P
Sbjct: 752 DDHGEQSNSSSSGVMMENAFSL-RPNSSQNRGNLNCPNPIILDLFNQEAYPGFNPHRYIH 810
Query: 169 -SRSEGGFRKKLQASLEAQIR--------FLIKKCHTLSGSEITHSGVRTGGTSTSAPLF 219
SE G + L++S ++ + L+ H L+GSE + ++ T
Sbjct: 811 KELSELGKEQTLKSSTDSDVARMTTNFDGHLVTLTH-LAGSEEGNKHLQGAET-----FL 864
Query: 220 SLDASRAVVLLDRF--SNLKGESLEFATGLVEDVLNGKATSDSLL--------LESHGQS 269
L +R + +LD L+GE L + L+ ++ K SD+L+ LE Q
Sbjct: 865 QLSKARKLGILDLSPEDELEGELLYYQLQLLGTAVSRKQLSDNLVYEVAKKLPLEIDEQH 924
Query: 270 ANKEDLISVKEFIYRQSDILRGRGGIVNSNSGSAAGVGMVAVAAAAAAASAASGKTFTTP 329
+ D + V ++ + + R +G N + A +AAA AAA+ +S T
Sbjct: 925 GRRWDDVLVNKYFHDVRE-ARKQGRKEQRNKQAQA-----VLAAATAAAATSSRNTSLRK 978
Query: 330 DL 331
D+
Sbjct: 979 DM 980
>At5g43670 protein transport protein SEC23
Length = 794
Score = 29.6 bits (65), Expect = 8.7
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 54 PLPSRSHSSLSSRPTSSANNSSPGRGGGGNVSRNGSAMSLMS-----GLGSYASLFPGQC 108
PLPSR S ++ PT++A+ S+ G ++ N S SL S G G + L P
Sbjct: 114 PLPSRQSGSNTTTPTAAASWSNGFNQGVRSMPSNSSFSSLASSTVGGGGGVISELGPA-- 171
Query: 109 IPVTLFVFVDDFS 121
FVFV D S
Sbjct: 172 -----FVFVVDAS 179
>At4g27520 early nodulin-like 2 predicted GPI-anchored protein
Length = 349
Score = 29.6 bits (65), Expect = 8.7
Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 32/180 (17%)
Query: 41 HAMAPFAKSQTMPPLPSRSHSSLSSRPTSSANNSSPGR---GGGGNVSRNGSAMSLMSGL 97
HA AP + + P +HS SS P S S PG GG + ++ SA+
Sbjct: 141 HAAAPGSSTPGSMTPPGGAHSPKSSSPV-SPTTSPPGSTTPPGGAHSPKSSSAV------ 193
Query: 98 GSYASLFPGQCIPVTLFVFVDDFSNLSNSSTNGEESSDVSSLSQSNSMSSAAKANLPAKV 157
S A+ PG P S +S +++ S +S S++ ++ A + K
Sbjct: 194 -SPATSPPGSMAP-------KSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPMAPKS 245
Query: 158 SGSVVMLARPASRSEGGFRKKLQASLEAQIRFLIKKCHTLSGSEITHSGVRTGGTSTSAP 217
S ++ + P + G K + +S S + GG+++S+P
Sbjct: 246 SSTIPPSSAPMTSPPGSMAPKSSS--------------PVSNSPTVSPSLAPGGSTSSSP 291
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,462,805
Number of Sequences: 26719
Number of extensions: 1011370
Number of successful extensions: 2791
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2767
Number of HSP's gapped (non-prelim): 46
length of query: 975
length of database: 11,318,596
effective HSP length: 109
effective length of query: 866
effective length of database: 8,406,225
effective search space: 7279790850
effective search space used: 7279790850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Lotus: description of TM0369c.3