BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0359.3
(1572 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 747 0.0
At1g48710 hypothetical protein 742 0.0
At3g60170 putative protein 731 0.0
At2g15650 putative retroelement pol polyprotein 700 0.0
At1g32590 hypothetical protein, 5' partial 650 0.0
At3g59720 copia-type reverse transcriptase-like protein 640 0.0
At3g25450 hypothetical protein 624 e-178
At2g20460 putative retroelement pol polyprotein 610 e-174
At2g16000 putative retroelement pol polyprotein 604 e-172
At2g05390 putative retroelement pol polyprotein 572 e-163
At1g31210 putative reverse transcriptase 571 e-162
At1g70010 hypothetical protein 568 e-162
At1g37110 551 e-156
At2g07550 putative retroelement pol polyprotein 544 e-154
At2g21460 putative retroelement pol polyprotein 540 e-153
At2g13930 putative retroelement pol polyprotein 534 e-151
At4g17450 retrotransposon like protein 518 e-147
At5g35820 copia-like retrotransposable element 518 e-146
At1g26990 polyprotein, putative 513 e-145
At4g03810 putative retrotransposon protein 478 e-135
>At3g61330 copia-type polyprotein
Length = 1352
Score = 747 bits (1928), Expect = 0.0
Identities = 408/1022 (39%), Positives = 579/1022 (55%), Gaps = 32/1022 (3%)
Query: 562 KEDPESGYLRTKLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPG 615
K + ++ Y+ K+ + L+A K + WYLDSG S HM G K MF EL
Sbjct: 301 KFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVR 360
Query: 616 GEVGFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFN 671
G V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 361 GNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLK 420
Query: 672 QKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMR 731
+ Q + KN ++ + + AQ +K + EE W+WH R GH +
Sbjct: 421 DNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFG 478
Query: 732 KISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGP 791
+ LS+ +VRGLP + + +CE C GK K+ F ++ +PLEL+H D+ GP
Sbjct: 479 GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 792 VKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDH 851
+K +S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 852 GGEFENDKFESLFDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWA 911
GGEF + +F + GI + PR+PQQNGVVERKNRT+ EMAR+ML+ + K WA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 912 EAVNTACYIPNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKS 971
EAV A Y+ NR + + KTP E W KP +S+ FG + + ++ K D KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 972 SKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGK 1031
K + +GY + SKG++ YN D K S ++ FD++ + D + N D
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNF 767
Query: 1032 APEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL- 1090
P E +E EP E PS T + T++ +E + + R RS E T
Sbjct: 768 FPH-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTEN 823
Query: 1091 ---LSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKW 1147
L+L L + EP +A++ K W AM+EE+ KND W L P IG KW
Sbjct: 824 QENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKW 883
Query: 1148 VFRNKLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1207
V++ K N KGEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +H
Sbjct: 884 VYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 943
Query: 1208 QMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1267
QMDVKSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ +
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 1003
Query: 1268 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1327
E +F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G
Sbjct: 1004 EKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGL 1063
Query: 1328 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1387
+ Y+LGI+V Q G +I Q Y KE+LKKF + +S TPM L K+++ V
Sbjct: 1064 MSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDP 1123
Query: 1388 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1447
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y
Sbjct: 1124 TTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS 1183
Query: 1448 KTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1507
TS+YKL GY D+D+ GD +RKST G ++G +W SK+Q + LST EAEY++A
Sbjct: 1184 TTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAAT 1243
Query: 1508 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1566
C +W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V
Sbjct: 1244 SCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1303
Query: 1567 QK 1568
K
Sbjct: 1304 SK 1305
>At1g48710 hypothetical protein
Length = 1352
Score = 742 bits (1916), Expect = 0.0
Identities = 406/1022 (39%), Positives = 576/1022 (55%), Gaps = 32/1022 (3%)
Query: 562 KEDPESGYLRTKLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPG 615
K + ++ Y+ K+ + L+A K + WYLDSG S HM G K MF EL
Sbjct: 301 KFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVR 360
Query: 616 GEVGFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFN 671
G V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 361 GNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLK 420
Query: 672 QKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMR 731
+ Q + KN ++ + + AQ +K + EE W+WH R GH +
Sbjct: 421 DNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFG 478
Query: 732 KISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGP 791
+ LS+ +VRGLP + + +CE C GK K+ F ++ + LEL+H D+ GP
Sbjct: 479 GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGP 537
Query: 792 VKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDH 851
+K +S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 852 GGEFENDKFESLFDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWA 911
GGEF + +F + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K WA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 912 EAVNTACYIPNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKS 971
EAV A Y+ NR + + KTP E W K +S+ FG + + ++ K D KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 972 SKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGK 1031
K + +GY + SKG++ YN D K S ++ FD++ + D + N D
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNF 767
Query: 1032 APEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL- 1090
P E +E EP E PS T + T++ +E + + R RS E T
Sbjct: 768 FPH-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTEN 823
Query: 1091 ---LSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKW 1147
L+L L + EP EA++ K W AM+EE+ KND W L P IG KW
Sbjct: 824 QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKW 883
Query: 1148 VFRNKLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1207
V++ K N KGEV R KARLVA+GY Q+ GIDY E FAPVARLE +RL+IS + + +H
Sbjct: 884 VYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 943
Query: 1208 QMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1267
QMDVKSAFLNG + EEVY+ QP G+ + + D V +LKK+LYGLKQAPRAW R+ +
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 1003
Query: 1268 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1327
E +F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G
Sbjct: 1004 EKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGL 1063
Query: 1328 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1387
+ Y+LGI+V Q G +I Q Y KE+LKKF M +S TPM L K+++ V
Sbjct: 1064 MSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDP 1123
Query: 1388 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1447
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y
Sbjct: 1124 TTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS 1183
Query: 1448 KTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1507
TS+YKL GY D+D+ GD +RKST G ++G +W SK+Q + LST EAEY++A
Sbjct: 1184 TTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAAT 1243
Query: 1508 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1566
C +W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V
Sbjct: 1244 SCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1303
Query: 1567 QK 1568
K
Sbjct: 1304 SK 1305
>At3g60170 putative protein
Length = 1339
Score = 731 bits (1887), Expect = 0.0
Identities = 407/1006 (40%), Positives = 585/1006 (57%), Gaps = 22/1006 (2%)
Query: 586 KHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSS---PCI 642
+ + W+LDSGCS HMTG K F EL+ V G + + +VG G++ V + I
Sbjct: 296 RDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVI 355
Query: 643 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 702
V V L +NLLS+ QL ++G ++ +C+ G+++ + N ++ + S+
Sbjct: 356 PEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASK 415
Query: 703 LEAQNVKCLLS---VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEAC 759
+ +N CL + +++E +WH R GH + + L+ +V GLP LK A+ +C C
Sbjct: 416 PQ-KNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILK-ATKEICAIC 473
Query: 760 QKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 819
GK + + K +S L+L+H D+ GP+ S GKRY + +DD++R TWV FL
Sbjct: 474 LTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFL 533
Query: 820 TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTP 879
K E+ A F F A V+ E + +R+D GGEF +++F S+GIS + TP
Sbjct: 534 HEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTP 593
Query: 880 QQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWK 939
QQNGV ERKNRT+ R+ML E + K FW+EA + +I NR + TP E W
Sbjct: 594 QQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWS 653
Query: 940 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEES 999
KP + YF FGC+ YV + K D KS KC+ LG S+ SK +R Y+ K I S
Sbjct: 654 GRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVIS 713
Query: 1000 IHVRFDD--KLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSN---SQT 1054
V FD+ D DQ+ + K L D K E VEP G N S
Sbjct: 714 KDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSP 773
Query: 1055 LKKSRITAAHPKELILGNKDEPVRTRSAFRPSE----ETLLSLKGLVSLIE--PKSIDEA 1108
+ A P + + P + + E E LS+ L+ + E P D+A
Sbjct: 774 ILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDA 833
Query: 1109 LQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKARLVA 1168
++DK W AME E+ KN+ W L P+ IG KWV++ KLNE GEV + KARLVA
Sbjct: 834 VKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVA 893
Query: 1169 QGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQ 1228
+GY+Q GIDYTE FAPVARL+ +R +++ S N + Q+DVKSAFL+G + EEVYV Q
Sbjct: 894 KGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQ 953
Query: 1229 PPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1288
P GF E + + V+KL+K+LYGLKQAPRAWY R+ ++ L+ EF R + TLF KT +
Sbjct: 954 PEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGN 1013
Query: 1289 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1348
ILIV +YVDD+IF +++++C EF + M EFEMS +G++K+FLGI+V Q+ G +I Q
Sbjct: 1014 ILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQR 1073
Query: 1349 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1408
+Y +E+L +F M ES K P+ P L K++ KV + +++ ++GSL+YLT +RPD++
Sbjct: 1074 RYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLM 1133
Query: 1409 FSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMY--KKTSEYKLSGYCDADYAGDR 1466
+ V L +RF S+PR +H A KRILRYLKGT LG+ Y +K KL + D+DYAGD
Sbjct: 1134 YGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDL 1193
Query: 1467 TERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQIL 1526
+R+ST G + S + WASK+Q +ALST EAEYI+AA C+ Q +W++ LE
Sbjct: 1194 NDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAE 1253
Query: 1527 E-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
E S I CDN++ I LSK+P+LH ++KHIEV++H++RD V V+
Sbjct: 1254 EKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVV 1299
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 700 bits (1806), Expect = 0.0
Identities = 391/1008 (38%), Positives = 574/1008 (56%), Gaps = 40/1008 (3%)
Query: 585 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICV---DSSPC 641
L+ W +DSGC+ HMT E+R F + + + G G I V
Sbjct: 321 LREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRI 380
Query: 642 IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLS 701
I NV LV GL NLLS+ Q+ GY V F K C + +G + N + + +KI+LS
Sbjct: 381 IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDANGKEIMNIEMTDKSFKIKLS 439
Query: 702 ELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQK 761
+E + + + E WH+RLGH S +++ Q+ LV GLP K + C+AC
Sbjct: 440 SVEEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNL 495
Query: 762 GKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTR 821
GK ++ F ++ T LE++H D+ GP++ +SI G RY ++ +DDY+ WV FL +
Sbjct: 496 GKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQ 555
Query: 822 KDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQ 881
K E+ A F F A V+ + C I +R E + GI+ + P +PQQ
Sbjct: 556 KSETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQ 605
Query: 882 NGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNK-TPYELWKN 940
NG ERKNR+L EMAR+ML E + WAEAV T+ Y+ NR+ + I + TP E W
Sbjct: 606 NGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCG 665
Query: 941 IKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESI 1000
KPN+S+ FG +CYV + K DAK+ +L+GYS+++KG+R + + + +E S
Sbjct: 666 HKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSR 725
Query: 1001 HVRF--DDKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEE-----DEPEEEAGPSNSQ 1053
V F D K D D+ + V+K +SIN + + +E + D G ++S
Sbjct: 726 DVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSH 785
Query: 1054 TL-----KKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKG-LVSLIEPKSIDE 1107
L ++ R T+ PK+ + + ++ ++E ++ LV+ EP++ DE
Sbjct: 786 VLSQVNDQEERETSESPKKY---KSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDE 842
Query: 1108 ALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKARLV 1167
A DKEW AM EE+ KN W LV KPE +VI KW+++ K + G V++KARLV
Sbjct: 843 ARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLV 902
Query: 1168 AQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVH 1227
A+G+SQ+ GIDY ETFAPV+R + IR L++++ L+QMDVKSAFLNG + EEVYV
Sbjct: 903 ARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVT 962
Query: 1228 QPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD 1287
QPPGF E K + V +L K+LYGLKQAPRAWYER+ S+ ++N F R D L+ K +
Sbjct: 963 QPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGE 1022
Query: 1288 DILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQ 1347
D+LIV +YVDD+I N L F + M+ EFEM+ +G L YFLG++V+Q G ++ Q
Sbjct: 1023 DVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQ 1082
Query: 1348 SKYTKELLKKFNMLESTVAKTPMHPTCI---LEKEDKSGKVCQKLYRGMIGSLLYLTASR 1404
KY +L+ KF M ES TP+ P +E +DK K YR ++G LLYL ASR
Sbjct: 1083 EKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTK-YRRIVGGLLYLCASR 1141
Query: 1405 PDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAG 1464
PD++++ +R+ S P H KR+LRY+KGT+N G+++ +L GY D+D+ G
Sbjct: 1142 PDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGG 1201
Query: 1465 DRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQ 1524
++KST G LG + W S +Q T+A STAEAEYI+ + Q +W++ ED+
Sbjct: 1202 SLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFG 1261
Query: 1525 I-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+ + IPI CDN +AI++ +NP+ H R KHIE+KYHF+R+ KG++
Sbjct: 1262 LKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLI 1309
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 650 bits (1676), Expect = 0.0
Identities = 364/1029 (35%), Positives = 554/1029 (53%), Gaps = 53/1029 (5%)
Query: 564 DPESGYLRTK---LSMLQISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGF 620
+ E+ Y+ + L M + I + Q W+LDSGCS HM G + F EL V
Sbjct: 229 EKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRL 288
Query: 621 GGNEKGKIVGTGTICVDSS---PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRA 677
G + + + G G + ++ I +V V GL +NL S+ QL KG I C
Sbjct: 289 GDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEV 348
Query: 678 VSQIDGSVLFNSKRKNN----IYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKI 733
+ + ++ +S N ++ E + +CL + + +WH+R GH + + +
Sbjct: 349 WHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGL 408
Query: 734 SQLSKLNLVRGLPNLKFASD-ALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPV 792
L++ +V+GLP + A+C+ C KGK + ++ +++ L+L+H D+ GP+
Sbjct: 409 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 468
Query: 793 KTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHG 852
S GKRY + +DD+SR W L+ K E+ F F A+V+ E ++V +RSD G
Sbjct: 469 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 528
Query: 853 GEFENDKFESLFDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAE 912
GE+ + +F+ +GI + TPQQNGV ERKNR++ M R ML E + + FW E
Sbjct: 529 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 588
Query: 913 AVNTACYIPNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSS 972
AV A YI NR + + + TP E W + KP++ + FG + Y L + K D KS
Sbjct: 589 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 648
Query: 973 KCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLD---SDQSKLVEKFADLSINVSDK 1029
KC++ G S SK +R Y+ I S V+FD++ D+S E D S +
Sbjct: 649 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAG 708
Query: 1030 GKAPE------EVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAF 1083
+ PE + + E +E EE + Q L ++ + KD V
Sbjct: 709 EEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVL 768
Query: 1084 RPSEETLLSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVI 1143
+E L + +P +EA Q + W AME E+ +N+ W LV+ PE VI
Sbjct: 769 ITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVI 828
Query: 1144 GTKWVFRNKLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHN 1203
G KW+F+ K NEKGEV + KARLVA+GY Q+ G+D+ E FAPVA+ + IRL++ +
Sbjct: 829 GLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKG 888
Query: 1204 IVLHQMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLS 1263
+ Q+DVKSAFL+G + E+V+V QP GFE E + V+KLKK+LYGLKQAPRAWY R+
Sbjct: 889 WSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIE 948
Query: 1264 SFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMS 1323
F + F + + TLF K + D L+V +YVDD+I+ ++ + + F M EF M+
Sbjct: 949 EFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMT 1008
Query: 1324 MMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSG 1383
+G++KYFLG++V Q G +I+Q KY E++KK+ M K P+ P +K K+G
Sbjct: 1009 DLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPG---QKLTKAG 1065
Query: 1384 KVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1443
V +R+ P E HL AVKRILRY++GT +LG
Sbjct: 1066 AV-----------------------------SRYMESPNEQHLLAVKRILRYVQGTLDLG 1096
Query: 1444 LMYKKTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEY 1503
+ Y++ +L G+ D+DYAGD +RKST G LG ++WASK+Q + LST EAE+
Sbjct: 1097 IQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEF 1156
Query: 1504 ISAAICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1562
+SA+ + Q +W+++ LE+ E ++CDN++ I LSKNP+LH R+KHI V+YHF+
Sbjct: 1157 VSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFL 1216
Query: 1563 RDYVQKGVL 1571
R+ V++G +
Sbjct: 1217 RELVKEGTI 1225
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 640 bits (1651), Expect = 0.0
Identities = 372/1018 (36%), Positives = 528/1018 (51%), Gaps = 112/1018 (11%)
Query: 566 ESGYLRTKLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVG 619
++ Y+ K+ + L+A K + WYLDSG S HM G K MF EL G V
Sbjct: 305 KANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 620 FGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSC 675
G K ++ G G I + I NV + + N+LS+ QL +KGYD+ +
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 676 RAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQ 735
+ + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 425 SIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGLEL 482
Query: 736 LSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTE 795
LS+ +VRGLP + + +CE C G K+ F ++ +PLEL+H D+ GP+K +
Sbjct: 483 LSRKEMVRGLPCINHPNQ-VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 796 SIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEF 855
S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GGEF
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEF 601
Query: 856 ENDKFESLFDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVN 915
+ +F + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K WAEAV
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVA 661
Query: 916 TACYIPNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCL 975
A Y+ NR + + KTP E W KP +S+ FG + + ++ +K D KS K +
Sbjct: 662 CAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYI 721
Query: 976 LLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEE 1035
+GY + SKG++ YN D K S ++ FD++ + D + E + DK + E
Sbjct: 722 FIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTRE 781
Query: 1036 VEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL----L 1091
P E+ P++SQ + S + R RS E T L
Sbjct: 782 EPPSEEPTTPPTSPTSSQIEESS--------------SERTPRFRSIQELYEVTENQENL 827
Query: 1092 SLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRN 1151
+L L + EP EA++ K W AM+EE+ KND W L P IG KWV++
Sbjct: 828 TLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKA 887
Query: 1152 KLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDV 1211
K N KGEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQMDV
Sbjct: 888 KKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDV 947
Query: 1212 KSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 1271
KSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ + E +F
Sbjct: 948 KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDF 1007
Query: 1272 VRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYF 1331
++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G + Y+
Sbjct: 1008 IKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYY 1067
Query: 1332 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 1391
LGI+V Q G +I Q Y KE+LKKF M +S +
Sbjct: 1068 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPS------------------------- 1102
Query: 1392 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSE 1451
++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y TS
Sbjct: 1103 -LVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTS- 1160
Query: 1452 YKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICST 1511
DY +C
Sbjct: 1161 ---------DY------------------------------------------KLVVCHA 1169
Query: 1512 QMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQK 1568
+W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K
Sbjct: 1170 --IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSK 1225
>At3g25450 hypothetical protein
Length = 1343
Score = 624 bits (1610), Expect = e-178
Identities = 360/1012 (35%), Positives = 554/1012 (54%), Gaps = 41/1012 (4%)
Query: 587 HQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSS----PCI 642
+ +WYLD+G S HMTG + F +L G+V FG + I G G+I S +
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKIL 348
Query: 643 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLS 701
+V + L N+LS+ Q + G D+ + + +G++L ++R +N +YK+
Sbjct: 349 FDVYYIPDLKSNILSLGQATESGCDIRMREDYL-TLHDREGNLLIKAQRSRNRLYKV--- 404
Query: 702 ELEAQNVKCL-LSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQ 760
LE +N KCL L+ E +WH RLGH S I + K LV G+ + C +C
Sbjct: 405 SLEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCL 464
Query: 761 KGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLT 820
GK + F ++ LEL+H DL GP+ + KRY V++DD+SR+ W L
Sbjct: 465 FGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLK 524
Query: 821 RKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQ 880
K E+ F F A V+ E I R+D GGEF + +F+ GI+ + P TPQ
Sbjct: 525 EKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQ 584
Query: 881 QNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKN 940
QNGVVER+NRTL M R++L+ M + W EAV + Y+ NR+ R + N+TPYE++K+
Sbjct: 585 QNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKH 644
Query: 941 IKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESI 1000
KPN+ + FGCV Y L K D +S + LG SK +R + + I S
Sbjct: 645 KKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSR 704
Query: 1001 HVRFDDKLD----SDQSKLVEKFADLSINVSD---KGKAPEEVEPEEDEPEEEAGPSNSQ 1053
V FD+ S+ ++ +I +S+ G ++ E +E EE +
Sbjct: 705 DVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDE 764
Query: 1054 TLKKSRITAAHPKELILGNKDEPVRT--RSAFRPS-------------EETLLSLKGLVS 1098
+ + T H + + +PVR R RP+ E LL++
Sbjct: 765 NIIEEAETEEHDQSQ---EEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND--- 818
Query: 1099 LIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGE 1158
EP EA + KEW A +EE+ KN WSLV P IG KWVF+ K N G
Sbjct: 819 --EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGS 876
Query: 1159 VVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1218
+ + KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+I+ + ++ +H +DVK+AFL+G
Sbjct: 877 INKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHG 936
Query: 1219 YISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1278
+ E+VYV QP GF ++ + V+KL K+LYGL+QAPRAW +L+ L E +F + +
Sbjct: 937 ELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEP 996
Query: 1279 TLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQ 1338
+L+ K ++IL+V +YVDD++ +N + F + M +FEMS +G+L Y+LGI+V Q
Sbjct: 997 SLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQ 1056
Query: 1339 TPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLL 1398
+ +G + Q +Y K++L++ M + TPM + L K ++ + YR IG L
Sbjct: 1057 SKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLR 1116
Query: 1399 YLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1458
YL +RPD+ ++V + +R+ +PRE+H A+K+ILRYL+GTT+ GL +KK L GY
Sbjct: 1117 YLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYS 1176
Query: 1459 DADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH 1518
D+ + D + KST G+ +L ++W S++Q + LS+ EAE+++A + Q +W++
Sbjct: 1177 DSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQE 1236
Query: 1519 QLEDYQILE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKG 1569
L + E + I DN +AI+L+KNP+ H R+KHI +YHFIR+ V+ G
Sbjct: 1237 LLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENG 1288
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 610 bits (1574), Expect = e-174
Identities = 351/1004 (34%), Positives = 548/1004 (53%), Gaps = 37/1004 (3%)
Query: 585 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDN 644
L +W +DSG + H++ ++++F+ L V +I G GT+ ++ + N
Sbjct: 437 LSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQN 496
Query: 645 VLLVDGLTHNLLSISQLA-DKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 703
VL + NL+SIS L D G VIF+ C+ G L KR N+Y + ++
Sbjct: 497 VLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD-TQS 555
Query: 704 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 763
A +V ++ V+ VWH+RLGH S ++ LS+ V G K A C C K
Sbjct: 556 PAISVNAVVDVS----VWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLAK 608
Query: 764 FTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 823
K+ F + N + S ELLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 609 QKKLSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKS 667
Query: 824 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQNG 883
+ VF FI V+N+ R+ VRSD+ E F + + GI SCP TP+QN
Sbjct: 668 DVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETPEQNS 724
Query: 884 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKNIKP 943
VVERK++ + +AR ++ ++ M+ +W + V TA ++ NR + NKTP+E+ P
Sbjct: 725 VVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLP 784
Query: 944 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1003
+ S FGC+CY + + HKF +S C+ LGY KG++ + ++ + S +V
Sbjct: 785 DYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVE 844
Query: 1004 FDDKL----DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSR 1059
F ++L S QS ++ G + P + PS + K R
Sbjct: 845 FHEELFPLASSQQSATTASDVFTPMDPLSSGNSITS-----HLPSPQISPSTQ--ISKRR 897
Query: 1060 ITA--AHPKEL--ILGNKDE--PVRTRSAFRP-SEETLLSLKGLVSLIEPKSIDEALQDK 1112
IT AH ++ NKD+ P+ + ++ S +L + + + P+S EA K
Sbjct: 898 ITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSK 957
Query: 1113 EWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKARLVAQGYS 1172
EW A+++E+ + D W + P +G KWVF K + G + R KAR+VA+GY+
Sbjct: 958 EWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYT 1017
Query: 1173 QQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGF 1232
Q+EG+DYTETF+PVA++ ++LL+ S + L+Q+D+ +AFLNG + E +Y+ P G+
Sbjct: 1018 QKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGY 1077
Query: 1233 EDER----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1288
D + P+ V +LKKS+YGLKQA R W+ + S+ LL F + D TLF + +
Sbjct: 1078 ADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSE 1137
Query: 1289 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1348
+++ +YVDDI+ S + + +E ++A F++ +G LKYFLG++V +T EG + Q
Sbjct: 1138 FIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQR 1197
Query: 1349 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1408
KY ELL +ML+ + PM P L K D +++YR ++G L+YLT +RPDI
Sbjct: 1198 KYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDIT 1257
Query: 1409 FSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTE 1468
F+V+ +F S PR HL AV ++L+Y+KGT GL Y + L GY DAD+
Sbjct: 1258 FAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDS 1317
Query: 1469 RKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILES 1528
R+ST G F+GS+L+SW SK+Q T++ S+AEAEY + A+ S +M W+ L ++ S
Sbjct: 1318 RRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRV-HS 1376
Query: 1529 NIPI-YCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+PI Y D+TAA+ ++ NP+ H R KHIE+ H +R+ + G L
Sbjct: 1377 GVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQL 1420
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 604 bits (1558), Expect = e-172
Identities = 346/1004 (34%), Positives = 545/1004 (53%), Gaps = 33/1004 (3%)
Query: 585 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDN 644
L +W +DSG + H++ ++ +F L V KI G GT+ ++ + N
Sbjct: 426 LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKN 485
Query: 645 VLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 703
VL + NL+SIS L D G VIF++ SC I G +L +R N+Y + + +
Sbjct: 486 VLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGD- 544
Query: 704 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 763
++ +V ++ ++ +WHRRLGHAS++++ +S G K C C K
Sbjct: 545 QSISVNAVVDIS----MWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHLAK 597
Query: 764 FTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 823
K+ F N V +LLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 598 QRKLSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKS 656
Query: 824 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQNG 883
E VF FI QV+N+ ++ VRSD+ E KF S + GI SCP TP+QN
Sbjct: 657 EVLTVFPAFIQQVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNS 713
Query: 884 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKNIKP 943
VVERK++ + +AR ++ ++ + W + V TA ++ NR + ++NKTPYE+ P
Sbjct: 714 VVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAP 773
Query: 944 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1003
FGC+CY + + HKF +S CL LGY KG++ + ++ T+ S +V+
Sbjct: 774 VYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQ 833
Query: 1004 FDDKL--------DSDQSKLVEKFADLSINV-SDKGKAPEEVEPE-EDEPEEEAGPSNSQ 1053
F +++ KL +S + SD +P + + D P + +SQ
Sbjct: 834 FHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQ----ISSQ 889
Query: 1054 TLKK--SRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQD 1111
++K + + H + +K T S + S + + + + P + EA
Sbjct: 890 RVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDT 949
Query: 1112 KEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKARLVAQGY 1171
KEW A++ E+ K + W + P+ +G KWVF K G + R KARLVA+GY
Sbjct: 950 KEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGY 1009
Query: 1172 SQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPG 1231
+Q+EG+DYT+TF+PVA++ I+LL+ S + L Q+DV +AFLNG + EE+++ P G
Sbjct: 1010 TQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEG 1069
Query: 1232 FEDER----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD 1287
+ + + + V +LK+S+YGLKQA R W+++ SS LL F + D TLF K Y
Sbjct: 1070 YAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDG 1129
Query: 1288 DILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQ 1347
+ +IV +YVDDI+ S +++ + +E + F++ +G+LKYFLG++V +T G I Q
Sbjct: 1130 EFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQ 1189
Query: 1348 SKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDI 1407
KY ELL+ ML PM P + K+D + YR ++G L+YLT +RPDI
Sbjct: 1190 RKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDI 1249
Query: 1408 LFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRT 1467
F+V+ +F S PR THLTA R+L+Y+KGT GL Y +S+ L G+ D+D+A +
Sbjct: 1250 TFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQD 1309
Query: 1468 ERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILE 1527
R+ST F+G +L+SW SK+Q T++ S+AEAEY + A+ + +M+W+ L Q
Sbjct: 1310 SRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASP 1369
Query: 1528 SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L
Sbjct: 1370 PVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGEL 1413
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 572 bits (1474), Expect = e-163
Identities = 348/1008 (34%), Positives = 537/1008 (52%), Gaps = 60/1008 (5%)
Query: 589 SWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSS----PCIDN 644
SWYLD+G S HMTG + F +L G+V FG + + I G G+I + + + +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 645 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLSEL 703
V + L N++S+ Q + G DV + +G +L + R +N +YK+ +L
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQL-TLHDREGCLLLRATRSRNRLYKV---DL 394
Query: 704 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 763
+NVKCL + + + + LV G+ N+ + C +C GK
Sbjct: 395 NVENVKCL------------------QLEAATMVRKELVIGISNIPKEKET-CGSCLLGK 435
Query: 764 FTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 823
+ PF S+ LEL+H DL GP+ + KRY +V++DD++R+ W L K
Sbjct: 436 QARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKS 495
Query: 824 ESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQNG 883
E+ F F +V+ E +I R+D GGEF + +F+ GI+ + P TPQQNG
Sbjct: 496 EAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNG 555
Query: 884 VVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKNIKP 943
VVER+NRTL M R++L+ M + W EAV + YI NR+ R + N+TPYE++K KP
Sbjct: 556 VVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKP 615
Query: 944 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYN-TDAKTIEESIHV 1002
N+ + FGC+ Y L K D +S + LG SK +R + T+ K I+ +
Sbjct: 616 NVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSD 675
Query: 1003 RFDDKLDSDQSKLVEKFADLSINVSD------KGKAPEEVEPEEDEPE---------EEA 1047
+ S + +F + I SD G+ E EE E E EE
Sbjct: 676 SETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEET 735
Query: 1048 GPSNSQ---TLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKS 1104
PS++ TL++S P L D+ V E+ LL++ EP
Sbjct: 736 QPSHATPLPTLRRSTRQVGKPNYL-----DDYVLMAEI--EGEQVLLAIND-----EPWD 783
Query: 1105 IDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKA 1164
EA + KEW A +EE+ KN WSL+ P VIG KWVF+ K N G + + KA
Sbjct: 784 FKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKA 843
Query: 1165 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1224
RLVA+GY Q+ GIDY E FA VAR+E IR++I+ + ++ +H +DVK+AFL+G + E+V
Sbjct: 844 RLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDV 903
Query: 1225 YVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKT 1284
YV QP GF ++ V+KL K+LYGLKQAPRAW +L+ L E FV+ + +++ +
Sbjct: 904 YVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQ 963
Query: 1285 YKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTY 1344
+ +LIV IYVDD++ ++ L F + M +FEMS +G+L Y+LGI+V G
Sbjct: 964 EEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGII 1023
Query: 1345 IHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASR 1404
+ Q +Y +++++ M PM L K + + ++ YR MIG L Y+ +R
Sbjct: 1024 LRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTR 1083
Query: 1405 PDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAG 1464
PD+ + V + +R+ PRE+H A+K++LRYLKGT + GL K+ + L GY D+ ++
Sbjct: 1084 PDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSA 1143
Query: 1465 DRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQL-EDY 1523
D + KST G+ +L ++W S++Q +ALS+ EAE+++A + Q +W++ E
Sbjct: 1144 DLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVC 1203
Query: 1524 QILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+ I DN +AI+L+KN + H R+KHI +YHFIR+ V+ ++
Sbjct: 1204 GTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLV 1251
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 571 bits (1471), Expect = e-162
Identities = 343/1020 (33%), Positives = 543/1020 (52%), Gaps = 47/1020 (4%)
Query: 588 QSWYLDSGCSRHMTGEKRMFRELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPC---ID 643
+ W+ DS + H+T + G + V G I TG+ + SS ++
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 644 NVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 702
VL+V + +LLS+S+L D V F+ + V+ R+N +Y + E
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQE 439
Query: 703 LEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKG 762
A + EE VWH RLGHA+ + + L ++ K + +CE CQ G
Sbjct: 440 FVALYSNRQCAATEE--VWHHRLGHANSKALQHLQNSKAIQ---INKSRTSPVCEPCQMG 494
Query: 763 KFTKVPFNAKNVVSTSR---PLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 819
K +++PF ++S SR PL+ +H DL+GP S G +Y + VDDYSR++W L
Sbjct: 495 KSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPL 550
Query: 820 TRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTP 879
K E +VF +F V+N+ +I +SD GGEF ++K ++ +GI H SCP TP
Sbjct: 551 HNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610
Query: 880 QQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWK 939
QQNG+ ERK+R L E+ +ML + + FW E+ TA YI NR+ + N +PYE
Sbjct: 611 QQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALF 670
Query: 940 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFR-FYNTDAK---- 994
KP+ S FG CY +KFD +S +C+ LGY+ + KG+R FY K
Sbjct: 671 GEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYIS 730
Query: 995 --TIEESIHVRFDDKLDS----DQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAG 1048
I + F +K S + L++ + I+ AP ++ + + AG
Sbjct: 731 RNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDLNTYAG 790
Query: 1049 PSNSQTLKKSRITA----------------AHPKELILGNKDEPVRTRSAFRPSEETLLS 1092
++ L T+ A +E ++ + R+++ +
Sbjct: 791 SQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRSKAGIQKPNTRYAL 850
Query: 1093 LKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNK 1152
+ ++ EPK++ A++ W A+ EE+N+ WSLV ++++++ +KWVF+ K
Sbjct: 851 ITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTK 910
Query: 1153 LNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVK 1212
L+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL++ S + + Q+DV
Sbjct: 911 LHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVS 970
Query: 1213 SAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFV 1272
+AFL+G + E V+++QP GF D +KP HV +L K++YGLKQAPRAW++ S+FLL+ FV
Sbjct: 971 NAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFV 1030
Query: 1273 RGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFL 1332
K D +LF IL + +YVDDI+ ++QSL ++ + ++ F M +G +YFL
Sbjct: 1031 CSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFL 1090
Query: 1333 GIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRG 1392
GIQ++ G ++HQ+ Y ++L++ M + TP+ L+ + +R
Sbjct: 1091 GIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQ--LDNLNSELFAEPTYFRS 1148
Query: 1393 MIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEY 1452
+ G L YLT +RPDI F+V+ + P + +KRILRY+KGT +GL K+ S
Sbjct: 1149 LAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTL 1208
Query: 1453 KLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQ 1512
LS Y D+D+AG + R+ST G C LGSNL+SW++KRQ T++ S+ EAEY + + +
Sbjct: 1209 TLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAARE 1268
Query: 1513 MLWMKHQLEDYQILE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+ W+ L D I + +YCDN +A+ LS NP LH+R+KH + YH+IR+ V G++
Sbjct: 1269 ITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLI 1328
>At1g70010 hypothetical protein
Length = 1315
Score = 568 bits (1464), Expect = e-162
Identities = 335/968 (34%), Positives = 514/968 (52%), Gaps = 35/968 (3%)
Query: 631 TGTICVDSSPCIDNVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNS 689
+G++ + +++VL + NLLS+S L G + F++ SC ++
Sbjct: 314 SGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMG 373
Query: 690 KRKNNIYKIRLSELEAQNVKCLLSVNE--EQWVWHRRLGHASMRKISQLSKLNLVRGLPN 747
K+ N+Y + L L ++V +WH+RLGH S++K+ +S L P
Sbjct: 374 KQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSL---LSFPK 430
Query: 748 LKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIV 807
K +D C C K +PF + N S SRP +L+HID +GP ++ G RY + IV
Sbjct: 431 QKNNTDFHCRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYRYFLTIV 489
Query: 808 DDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSY 867
DDYSR TWV L K + V TF+ V+N+ I VRSD+ E F + S
Sbjct: 490 DDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSK 546
Query: 868 GISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVR 927
GI SCP TPQQN VVERK++ + +AR++ ++ + +W + + TA Y+ NR+
Sbjct: 547 GIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAP 606
Query: 928 PILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFR 987
+ +K P+E+ P + FGC+CY + HKF ++ C +GY KG++
Sbjct: 607 ILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYK 666
Query: 988 FYNTDAKTIEESIHVRFDDKL----DSDQSKLVEKF-ADLS------------INVSDKG 1030
+ + +I S HV F ++L SD S+ + F DL+ +N SD
Sbjct: 667 LLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSS 726
Query: 1031 KAPE---EVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSE 1087
+ E P + PE S+ + K + + + ++ E + S R ++
Sbjct: 727 SSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRIND 786
Query: 1088 ETLLSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKW 1147
L L L EP + EA + + W AM E + W + P + IG +W
Sbjct: 787 PYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRW 846
Query: 1148 VFRNKLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1207
+F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA+L +++LL+ + + L
Sbjct: 847 IFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLT 906
Query: 1208 QMDVKSAFLNGYISEEVYVHQPPGFE----DERKPDHVFKLKKSLYGLKQAPRAWYERLS 1263
Q+D+ +AFLNG + EE+Y+ P G+ D P+ V +LKKSLYGLKQA R WY + S
Sbjct: 907 QLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFS 966
Query: 1264 SFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMS 1323
S LL F++ D T F K L V +Y+DDII S N + M++ F++
Sbjct: 967 STLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLR 1026
Query: 1324 MMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSG 1383
+GELKYFLG+++ ++ +G +I Q KY +LL + L + PM P+ + +
Sbjct: 1027 DLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGD 1086
Query: 1384 KVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1443
V YR +IG L+YL +RPDI F+V+ A+F PR+ HL AV +IL+Y+KGT G
Sbjct: 1087 FVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQG 1146
Query: 1444 LMYKKTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEY 1503
L Y TSE +L Y +ADY R R+ST G C FLG +L+ W S++Q ++ S+AEAEY
Sbjct: 1147 LFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEY 1206
Query: 1504 ISAAICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1562
S ++ + +++W+ + L++ Q+ L ++CDN AAI ++ N + H R KHIE H +
Sbjct: 1207 RSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSV 1266
Query: 1563 RDYVQKGV 1570
R+ + KG+
Sbjct: 1267 RERLLKGL 1274
>At1g37110
Length = 1356
Score = 551 bits (1419), Expect = e-156
Identities = 349/1058 (32%), Positives = 551/1058 (51%), Gaps = 77/1058 (7%)
Query: 566 ESGYLRTKLSMLQ-ISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNE 624
E+G + KL + +S+ + W LDSGC+ HMT + F + K + G +
Sbjct: 283 EAGVITEKLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDH 342
Query: 625 KGKIVGTGTICVDSS----PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQ 680
+ G GTI +D+ ++NV V L NL+S L GY + R
Sbjct: 343 SVESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFK- 401
Query: 681 IDGSVLFNSKRKNNIYKIR----LSEL---EAQNVKCLLSVNEEQWVWHRRLGHASMRKI 733
+ N +Y + +SEL E VK L WH RLGH SM +
Sbjct: 402 -NNKTALRGSLSNGLYVLDGSTVMSELCNAETDKVKTAL--------WHSRLGHMSMNNL 452
Query: 734 SQLSKLNLV--RGLPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFG- 790
L+ L+ + + L+F CE C GK KV FN S L +H DL+G
Sbjct: 453 KVLAGKGLIDRKEINELEF-----CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGS 506
Query: 791 PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSD 850
P T SI GK+Y + I+DD +R W+ FL KDE+ F + + V+N+ ++ +R+D
Sbjct: 507 PNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTD 566
Query: 851 HGGEFENDKFESLFDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFW 910
+G EF N +F+S +GI +C TPQQNGV ER NRT+ E R +L ++G+ + FW
Sbjct: 567 NGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFW 626
Query: 911 AEAVNTACYIPNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAK 970
AEA TA Y+ NR I + P E+W N KP + FG + YV + +L +
Sbjct: 627 AEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKP---R 683
Query: 971 SSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKL----------DSDQSKLVE--- 1017
+ K LGY +KG++ + + + S +V F + + D+D E
Sbjct: 684 ALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTS 743
Query: 1018 ------KFADLSIN------VSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAH- 1064
KFA+ S + SD E + + E E E +T K++ +T
Sbjct: 744 SEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKL 803
Query: 1065 PKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLI--EPKSIDEALQDKE---WILAME 1119
++ + N + P R F +L + + I EP+S EA++ ++ W +A
Sbjct: 804 ARDRVRRNINPPTR----FTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATH 859
Query: 1120 EELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKG-EVVRNKARLVAQGYSQQEGID 1178
+E++ KN W LV KP++ +IG +W+F+ K G E R KARLVA+GY+Q+EG+D
Sbjct: 860 DEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVD 919
Query: 1179 YTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDERKP 1238
Y E FAPV + +IR+L+S V+ ++ L QMDVK+ FL+G + EE+Y+ QP GF +
Sbjct: 920 YQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSE 979
Query: 1239 DHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD-DILIVQIYVD 1297
+ V +LKKSLYGLKQ+PR W +R F+ +F+R + D ++ K + D + + +YVD
Sbjct: 980 NKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVD 1039
Query: 1298 DIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSK--YTKELL 1355
D++ A+++ E + EFEM MG LGI + + +G + S+ Y +++L
Sbjct: 1040 DMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVL 1099
Query: 1356 KKFNMLESTVAKTPM---HPTCILEKEDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSV 1411
+FNM + + P+ + +ED+ Y +GS++Y + +RPD+ +++
Sbjct: 1100 DRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAI 1159
Query: 1412 HLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKS 1471
L +R+ S P H AVK ++RYLKG +L L++ K ++ ++GYCD++YA D R+S
Sbjct: 1160 CLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRS 1219
Query: 1472 TFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIP 1531
G +G N VSW + Q +A+ST EAEYI+ A + + +W+K L+D + + +
Sbjct: 1220 ISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVK 1279
Query: 1532 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKG 1569
I+CD+ +AI LSKN + H R KHI+V++++IRD V+ G
Sbjct: 1280 IWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESG 1317
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 544 bits (1402), Expect = e-154
Identities = 342/1055 (32%), Positives = 543/1055 (51%), Gaps = 79/1055 (7%)
Query: 569 YLRTKLSMLQISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKI 628
Y+ LS ++ L W LD+GCS HMT ++ F E GG V G ++
Sbjct: 293 YVSEALSSTEVHL-----EDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRV 347
Query: 629 VGTGTICVDSSP----CIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGS 684
G GTI V +S + NV + + NLLS+ GY F + +
Sbjct: 348 RGVGTIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYK--FESEDGILRIKAGNQ 405
Query: 685 VLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG 744
VL +R + +Y + + ++++ ++ ++ +WH+RL H S + + L +
Sbjct: 406 VLLTGRRYDTLYLLNWKPVASESL-AVVKRADDTVLWHQRLCHMSQKNMEILVRKGF--- 461
Query: 745 LPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYG 803
L K +S +CE C GK + F+ + T LE +H DL+G P S+G +Y
Sbjct: 462 LDKKKVSSLDVCEDCIYGKAKRKSFSLAHH-DTKEKLEYIHSDLWGAPFVPLSLGKCQYF 520
Query: 804 MVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESL 863
M I+DD++R WV F+ KDE+ F ++ V+N+ R+ +R+D+G EF N F+
Sbjct: 521 MSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGF 580
Query: 864 FDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNR 923
+S GI +C TPQQNGV ER NRT+ E R+ML ++G+ K FWAEA +T + N+
Sbjct: 581 CESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINK 640
Query: 924 ISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRS 983
+ + P + W P SY +GCV +V +T D K + ++ K +L+GY
Sbjct: 641 TPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAFV-HTDD--GKLEPRAKKGVLIGYPVGV 697
Query: 984 KGFRFYNTDAKTI--------------------EESIHVRFDDKLDSDQSKLVEKFADL- 1022
KG++ + D + +E++ DD+ S +E D+
Sbjct: 698 KGYKVWILDERKCVVSRNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVI 757
Query: 1023 ------SINVSDKGKAPEEVEP-EEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNK-- 1073
+N ++P P +D ++E N L + +E+ +
Sbjct: 758 SGGDQEMVNTIPAPESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFD 817
Query: 1074 DEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQD---KEWILAMEEELNQFSKNDV 1130
DE + + + +EP++ +A D +W LAM+EE++ KN+
Sbjct: 818 DEDYYAEALYTTEDG---------EAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNT 868
Query: 1131 WSLVKKPENVHVIGTKWVFRNKLNEKG-EVVRNKARLVAQGYSQQEGIDYTETFAPVARL 1189
W++V +PEN +IG +W+F+ KL G E R KARLVA+GY+Q+EGIDY E FAPV +
Sbjct: 869 WTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKH 928
Query: 1190 EAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLY 1249
+IR+L+S ++ L Q+DVK+AFL+G + E++Y+ P G+E K + V L K+LY
Sbjct: 929 VSIRVLLSIVAQEDLELEQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALY 988
Query: 1250 GLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD-DILIVQIYVDDIIFGSANQSL 1308
GLKQAP+ W E+ +F+ E FV+ D+ + K D ++ + IYVDDI+ S N+
Sbjct: 989 GLKQAPKQWNEKFDNFMKEICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEA 1048
Query: 1309 CKEFSEMMQAEFEMSMMGELKYFLGIQV--DQTPEGTYIHQSKYTKELLKKFNMLESTVA 1366
+ FEM +G K LG+++ D+T ++ Q Y ++L+ +NM E+ A
Sbjct: 1049 ITALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPA 1108
Query: 1367 KTPM---------HPTCILEKEDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCAR 1416
TP+ ++ ED V Y +GS++Y + +RPD+ + V + +R
Sbjct: 1109 MTPLGAHFKFQAATEQKLIRDEDFMKSV---PYSSAVGSIMYAMLGTRPDLAYPVGIISR 1165
Query: 1417 FQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTFGNC 1476
F S P + H VK +LRY+KGT L YKK+S + + GYCDADYA D +R+S G
Sbjct: 1166 FMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLV 1225
Query: 1477 QFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDN 1536
LG N +SW S Q +A ST E+EY+S + +W+K L+D+ + ++ I+CD+
Sbjct: 1226 FTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDS 1285
Query: 1537 TAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
+AI+LSKN + H R KHI+VKYHFIR+ + G +
Sbjct: 1286 QSAIALSKNNVHHERTKHIDVKYHFIREIISDGTV 1320
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 540 bits (1390), Expect = e-153
Identities = 346/1044 (33%), Positives = 548/1044 (52%), Gaps = 62/1044 (5%)
Query: 569 YLRTKLSMLQISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKI 628
Y+ LS I L W +D+GCS HMT ++ F +L GG V G K+
Sbjct: 271 YVSEALSSTDIHL-----EDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKV 325
Query: 629 VGTGTICVDSSPC----IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGS 684
G GTI V + + NV + + NLLS+ GY + ++ S
Sbjct: 326 RGIGTIRVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIA--GDS 383
Query: 685 VLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG 744
VL +R +Y ++ + +++ ++ ++ +WHRRLGH S + + L K L
Sbjct: 384 VLLTVRRCYTLYLLQWRPVTEESLS-VVKRQDDTILWHRRLGHMSQKNMDLLLKKGL--- 439
Query: 745 LPNLKFASDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYG 803
L K + CE C GK ++ FN T LE +H DL+G P S+G +Y
Sbjct: 440 LDKKKVSKLETCEDCIYGKAKRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYF 498
Query: 804 MVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESL 863
+ +DDY+R + FL KDE+ F + V+N+ RI +R+D+G EF N F+
Sbjct: 499 ISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEF 558
Query: 864 FDSYGISHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNR 923
GI +C TPQQNGV ER NRTL E R+ML ++G+ K FWAEA +T + N+
Sbjct: 559 CSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINK 618
Query: 924 ISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRS 983
+ + P + W P SY FGC+ +V +T D K + ++ K +L+GY
Sbjct: 619 TPSSALNYEVPDKRWSGKSPIYSYLRRFGCIAFV-HTDDG--KLNPRAKKGILVGYPIGV 675
Query: 984 KGFRFYNTDAKTIEESIHVRFDDKL---DSDQSKLVEK---------FADLSIN----VS 1027
KG++ + + K S +V F + D QSK EK + DL ++ ++
Sbjct: 676 KGYKIWLLEEKKCVVSRNVIFQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVIT 735
Query: 1028 DKGKAP--EEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRT-RSAFR 1084
G P E P P S + I + +L+ +D RT R+ R
Sbjct: 736 SGGDDPIVEAQSPFNPSPATTQTYSEGVNSETDIIQSPLSYQLV---RDRDRRTIRAPVR 792
Query: 1085 PSEETLLSLKGLVSL-----IEPKSIDEALQD---KEWILAMEEELNQFSKNDVWSLVKK 1136
+E L+ + L + IEP EA + +W LAM EE+ KN W++VK+
Sbjct: 793 FDDEDYLA-EALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKR 851
Query: 1137 PENVHVIGTKWVFRNKLNEKG-EVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLL 1195
P++ VIG++W+++ KL G E R KARLVA+GY+Q++GIDY E FAPV + +IR+L
Sbjct: 852 PQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRIL 911
Query: 1196 ISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAP 1255
+S ++ L Q+DVK+AFL+G + E++Y+ P G+E+ K D V L KSLYGLKQAP
Sbjct: 912 MSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAP 971
Query: 1256 RAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSE 1314
+ W E+ ++++ E F+R D+ + K D + + +YVDD++ + N+ + E
Sbjct: 972 KQWNEKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKE 1031
Query: 1315 MMQAEFEMSMMGELKYFLGIQVDQTPEGT--YIHQSKYTKELLKKFNMLESTVAKTPMHP 1372
+ F+M +G K LG+++ + E ++ Q+ Y ++L+ +NM ES TP+
Sbjct: 1032 ELSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGA 1091
Query: 1373 -----TCILEKEDKSGKVCQKL-YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETH 1425
+EK+++ + + Y +GS++Y + +RPD+ + V + +R+ S P H
Sbjct: 1092 HLKMRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREH 1151
Query: 1426 LTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVS 1485
VK +LRY+KG+ L YK++S++K+ GYCDAD+A + R+S G LG + +S
Sbjct: 1152 WLGVKWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTIS 1211
Query: 1486 WASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKN 1545
W S +Q +ALST EAEY+S + +WMK L+++ + ++ I+CD+ +AI+LSKN
Sbjct: 1212 WKSGQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKN 1271
Query: 1546 PILHSRAKHIEVKYHFIRDYVQKG 1569
+ H R KHI+V+Y +IRD + G
Sbjct: 1272 NVHHERTKHIDVRYQYIRDIIANG 1295
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 534 bits (1375), Expect = e-151
Identities = 342/1034 (33%), Positives = 530/1034 (51%), Gaps = 71/1034 (6%)
Query: 590 WYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSP----CIDNV 645
W LD+GCS HMT K F++ K G V G + + G G+I + +S + +V
Sbjct: 285 WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDV 344
Query: 646 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 705
+ +T NL+S+ L D+G + V S + ++++ +Y + E
Sbjct: 345 RYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGC--STILKGQKRDTLYILDGVTEEG 402
Query: 706 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG--LPNLKFASDALCEACQKGK 763
++ V +E +WH RLGH S + + L K +R + L+F CE C GK
Sbjct: 403 ESHSSA-EVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEF-----CEDCVYGK 456
Query: 764 FTKVPFNAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRK 822
+V F V T L +H DL+G P S+G +Y + VDDYSR W+ FL +K
Sbjct: 457 QHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKK 515
Query: 823 DESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQN 882
DE+ F + V+N+ ++ ++R+D+G E+ N FE GI +C TPQQN
Sbjct: 516 DEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQN 575
Query: 883 GVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKNIK 942
G+ ER NRT+ + R+ML +GM K FWAEA +TA Y+ NR I P E W
Sbjct: 576 GIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGAL 635
Query: 943 PNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHV 1002
P++S FGC+ Y+ + +L + +S K + Y + KG++ + + K S +V
Sbjct: 636 PDLSSLRKFGCLAYIHADQGKL---NPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNV 692
Query: 1003 RF-------DDKLDSDQSKLVEKFADLSIN-------VSDKGKAPEE-VEPEE------- 1040
F D K DS + DL +N +D+G A ++ P E
Sbjct: 693 IFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNP 752
Query: 1041 ---------DEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLL 1091
DE EE + L ++ + I N F E
Sbjct: 753 VLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSED-- 810
Query: 1092 SLKGLVSLIEPKSIDEALQD---KEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWV 1148
EPKS EAL D ++W AM+EE+ SKN W LV KPE V +IG +WV
Sbjct: 811 -----DGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWV 865
Query: 1149 FRNKLNEKG-EVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1207
F K G E R ARLVA+G++Q+EG+DY E F+PV + +IR L+S V++N+ L
Sbjct: 866 FTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQ 925
Query: 1208 QMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1267
QMDVK+AFL+G++ EE+Y+ QP GFE +R + V LK+SLYGLKQ+PR W R F+
Sbjct: 926 QMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMR 985
Query: 1268 ENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG 1326
++ R D+ ++ K D I + +YVDD++ SAN+S E +++ EFEM +G
Sbjct: 986 GIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLG 1045
Query: 1327 ELKYFLGIQVDQTPEG--TYIHQSKYTKELLKKFNMLESTVAKTP------MHPTCILEK 1378
+ K LG+++ + + + Q Y K++L+ F M + TP + E
Sbjct: 1046 DAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEY 1105
Query: 1379 EDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLK 1437
E++ ++ Y IGS++Y + +RPD+ +S+ + +RF S P + H AVK +LRY++
Sbjct: 1106 EEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Query: 1438 GTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALS 1497
GT L ++K ++ L GYCD+DY + R+S G +G N +SW SK Q +A+S
Sbjct: 1166 GTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAIS 1225
Query: 1498 TAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1557
+ EAEY++ + LW+K + + + ++ D+ +AI+L+KN + H R KHI++
Sbjct: 1226 STEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDI 1285
Query: 1558 KYHFIRDYVQKGVL 1571
+ HFIRD + G++
Sbjct: 1286 RLHFIRDIICAGLI 1299
>At4g17450 retrotransposon like protein
Length = 1433
Score = 518 bits (1335), Expect = e-147
Identities = 319/1009 (31%), Positives = 506/1009 (49%), Gaps = 72/1009 (7%)
Query: 588 QSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 647
+ W +DSG + H+T + ++ + V + KI G G I + + + NVL
Sbjct: 430 RGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLHNVLY 489
Query: 648 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 707
+ NL+S + + SQ+ + + N+ ++ +
Sbjct: 490 IPEFKFNLIS----------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPE 539
Query: 708 VKCLLSVNEEQWVWHRRLGHASMRKISQLSK-LNL-VRGLPNLKFASDALCEACQKGKFT 765
SV + WH+RLGH + KI LS LNL V+ + +C C K
Sbjct: 540 FSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQK 599
Query: 766 KVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 825
+ F ++ + S +L+HID +GP + TW+ L K +
Sbjct: 600 HLSFQSRQNMC-SAAFDLVHIDTWGPFSVPTNDA--------------TWIYLLKNKSDV 644
Query: 826 HAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCPRTPQQNGVV 885
VF FI V + ++ VRSD+ E KF LF ++GI SCP TP+QN VV
Sbjct: 645 LHVFPAFINMVHTQYQTKLKSVRSDNAHEL---KFTDLFAAHGIVAYHSCPETPEQNSVV 701
Query: 886 ERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYELWKNIKPNI 945
ERK++ + +AR +L ++ + FW + V TA ++ NR+ + NK+PYE KNI P
Sbjct: 702 ERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAY 761
Query: 946 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFD 1005
FGC+CY + + HKF+ ++ C+ LGY KG++ + + + S HV F
Sbjct: 762 ESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFH 821
Query: 1006 DKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHP 1065
+ + F +S + D K + P P ++ L+++ I HP
Sbjct: 822 EDI----------FPFISSTIKDDIK---DFFPLLQFPAR----TDDLPLEQTSIIDTHP 864
Query: 1066 KELILGNKD----EPVRTRSAFRP------------SEETLLSLKGLVSLIEPKSIDEAL 1109
+ + +K +P+ R P +E + + + + P+ EA
Sbjct: 865 HQDVSSSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPFHAFINNITNAVIPQRYSEAK 924
Query: 1110 QDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRNKARLVAQ 1169
K W AM+EE+ + + WS+V P N IG KWVF K N G + R KARLVA+
Sbjct: 925 DFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAK 984
Query: 1170 GYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQP 1229
GY+Q+EG+DY ETF+PVA+L ++R+++ + +HQ+D+ +AFLNG + EE+Y+ P
Sbjct: 985 GYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIP 1044
Query: 1230 PGFED---ERKPDH-VFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTY 1285
PG+ D E P H + +L KS+YGLKQA R WY +LS+ L F + D TLF K
Sbjct: 1045 PGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYA 1104
Query: 1286 KDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYI 1345
++ V +YVDDI+ S + +F+ +++ F++ +G KYFLGI++ ++ +G I
Sbjct: 1105 NGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISI 1164
Query: 1346 HQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRP 1405
Q KY ELL L S + P+ P+ L KED YR ++G L+YL +RP
Sbjct: 1165 CQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRP 1224
Query: 1406 DILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGD 1465
DI ++V+ +F P HL+AV ++LRYLKGT GL Y ++ L GY D+D+
Sbjct: 1225 DIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSC 1284
Query: 1466 RTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQI 1525
R+ C F+G LVSW SK+Q T+++STAEAE+ + + + +M+W+ +D+++
Sbjct: 1285 TDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKV 1344
Query: 1526 LESNIP---IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1571
IP +YCDNTAA+ + N + H R K +E+ + R+ V+ G L
Sbjct: 1345 --PFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFL 1391
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 518 bits (1333), Expect = e-146
Identities = 330/1036 (31%), Positives = 544/1036 (51%), Gaps = 85/1036 (8%)
Query: 583 APLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVD----S 638
A + +W LD+GCS HMT K + K G+V G + ++ G G + + S
Sbjct: 305 AEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGS 364
Query: 639 SPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI 698
+ + +V + ++ NL+S+ L DKG ++K + + D +VL K+++ +Y +
Sbjct: 365 TILLTDVRYIPEMSKNLISLGTLEDKGC-WFESKKGILTIFKNDLTVL-TGKKESTLYFL 422
Query: 699 RLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQL-SKLNLVRGLPNLKFASDALCE 757
+ + L A + +E +WH RLGH + + L SK +L + +
Sbjct: 423 QGTTL-AGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNI------------ 469
Query: 758 ACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTE-SIGGKRYGMVIVDDYSRWTWV 816
+ F A V+ + L+ +H DL+G SIG +Y + +DD++R TW+
Sbjct: 470 --------MISFGAAKHVTKDK-LDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWI 520
Query: 817 KFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISHDFSCP 876
F+ KDE+ + F + Q++N++ ++ + +D+G EF N +F+S G+ +C
Sbjct: 521 YFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCA 580
Query: 877 RTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILNKTPYE 936
TPQQNGV ER NRT+ R ML E+G+ K FWAEA +TA ++ N+ I P E
Sbjct: 581 YTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEE 640
Query: 937 LWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTI 996
W P+ FG V Y+ + + +L+ ++ K + LGY D K F+ + + +
Sbjct: 641 KWTGHPPDYKILKKFGSVAYIHSDQGKLNP---RAKKGIFLGYPDGVKRFKVWLLEDRKC 697
Query: 997 EESIHVRFDDKLDSDQSKLVEKFADLSIN-VSDKGKAPEEVE---------PEEDEPEEE 1046
S + F + + + +L N +S++ K EVE +DE + E
Sbjct: 698 VVSRDIVFQEN---------QMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSE 748
Query: 1047 AGPSNSQTLKKSRITAAHPKELILGNKDEP---------------VRTRSAFRPSEETLL 1091
G +++Q + +A+ K++ + D+ +R F +++L+
Sbjct: 749 GGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLV 808
Query: 1092 SLKGLVS----LIEPKSIDEALQDKE---WILAMEEELNQFSKNDVWSLVKKPENVHVIG 1144
++ + EP++ +EA++ E W A EE++ KND W ++ KPE VIG
Sbjct: 809 GFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIG 868
Query: 1145 TKWVFRNKLNEKG-EVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHN 1203
KW+F+ K G E R KARLVA+G+SQ+EGIDY E F+PV + +IR L+S V +
Sbjct: 869 CKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFD 928
Query: 1204 IVLHQMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLS 1263
+ L Q+DVK+AFL+G + E + + QP G+EDE + V LKKSLYGLKQ+PR W +R
Sbjct: 929 MELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFD 988
Query: 1264 SFLLENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQAEFEM 1322
SF++ + + R K + ++ + D I + +YVDD++ S N+ ++ E + EFEM
Sbjct: 989 SFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEM 1048
Query: 1323 SMMGELKYFLGIQVDQTPEGTYIH--QSKYTKELLKKFNMLESTVAKTPMHPTCIL---- 1376
+G + LG+++ + E + QS+Y +L+ F M +S V++TP+ L
Sbjct: 1049 KDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAAN 1108
Query: 1377 EKEDKSGKVCQKL--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRIL 1433
EK KL Y IGS++Y + SRPD+ + V + +RF S P + H AVK ++
Sbjct: 1109 EKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVM 1168
Query: 1434 RYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQST 1493
RY+KGT + L +KK ++++ GYCD+DYA D R+S G G N +SW S Q
Sbjct: 1169 RYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRV 1228
Query: 1494 IALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAK 1553
+ALST EAEY++ A + +W++ + + + + CD+ +AI+LSKN + H R K
Sbjct: 1229 VALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTK 1288
Query: 1554 HIEVKYHFIRDYVQKG 1569
HI+V+YHFIR+ + G
Sbjct: 1289 HIDVRYHFIREKIADG 1304
>At1g26990 polyprotein, putative
Length = 1436
Score = 513 bits (1320), Expect = e-145
Identities = 321/1025 (31%), Positives = 518/1025 (50%), Gaps = 71/1025 (6%)
Query: 579 ISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIVGTGTICVDS 638
I + L ++W +DSG S H+T E+ ++ K V KI GTG I +
Sbjct: 410 IPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTD 469
Query: 639 SPCIDNVLLVDGLTHNLLSISQLADKGYD-VIFNQKSCRAVSQIDGSVLFNSKRKNNIYK 697
+ + NVL + NLLS+S L V F C + +L + N+Y
Sbjct: 470 ALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYI 529
Query: 698 IRL-------SELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKF 750
+ L S ++V SV E +WH+RLGH S KI LS + + LP K
Sbjct: 530 LNLDKSLVDVSSFPGKSV--CSSVKNESEMWHKRLGHPSFAKIDTLSDVLM---LPKQKI 584
Query: 751 ASDAL-CEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDD 809
D+ C C K +PF + N + + EL+HID +GP ++ RY + IVDD
Sbjct: 585 NKDSSHCHVCHLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDD 643
Query: 810 YSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGI 869
+SR TW+ L +K + VF +F+ V+ + ++ VRSD+ E KF LF GI
Sbjct: 644 FSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHEL---KFNELFAKEGI 700
Query: 870 SHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPI 929
D CP TP+QN VVERK++ L +AR ++ ++G+ +W + V TA ++ NR+ I
Sbjct: 701 KADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVI 760
Query: 930 LNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFY 989
N+TPYE KP+ S FGC+CY + KFD ++ C+ LGY KG++
Sbjct: 761 NNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLL 820
Query: 990 NTDAKTIEESIHVRF-DDKLDSDQSKLVEKFADLSINVSDKGKAPEE----VEPEEDEPE 1044
+ + ++ S HV F +D S + + D ++ +E V+ D P
Sbjct: 821 DIETYSVSISRHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPH 880
Query: 1045 --EEAG-----PSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRP----------SE 1087
+E+ PS ++ ++ ++ + H ++ N + P T+++ P SE
Sbjct: 881 NHDESSSMIFVPSEPKSTRQRKLPS-HLQDFHCYN-NTPTTTKTSPYPLTNYISYSYLSE 938
Query: 1088 ETLLSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKW 1147
+ + + P+ EA DK W AM +E++ F + WS+ P +G KW
Sbjct: 939 PFGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKW 998
Query: 1148 VFRNKLNEKGEVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1207
+ K G + R+KARLVA+GY+QQEGID+ TF+PVA++ +++L+S + LH
Sbjct: 999 IITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLH 1058
Query: 1208 QMDVKSAFLNGYISEEVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1267
Q+D+ +A LNG + EE+Y+ PPG+ + + G + +P A
Sbjct: 1059 QLDISNALLNGDLEEEIYMKLPPGYSE-------------IQGQEVSPNA---------- 1095
Query: 1268 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1327
+ D TLF K L+V +YVDDI+ S ++ E + + + F++ +GE
Sbjct: 1096 -----KCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGE 1150
Query: 1328 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1387
K+FLGI++ + +G + Q KY +LL + + + PM P L K+ +
Sbjct: 1151 PKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDG 1210
Query: 1388 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1447
K YR ++G L YL +RPDI F+V A++ S P + HL A+ +ILRYLKGT GL Y
Sbjct: 1211 KQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYG 1270
Query: 1448 KTSEYKLSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1507
+ + L G+ D+D+ R+ G F+G++LVSW SK+Q +++S+AEAEY + +
Sbjct: 1271 ADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMS 1330
Query: 1508 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1566
+ + +++W+ + L ++I +YCDN AA+ ++ N + H R KHIE H +R+ +
Sbjct: 1331 VATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECI 1390
Query: 1567 QKGVL 1571
+ G+L
Sbjct: 1391 EAGIL 1395
>At4g03810 putative retrotransposon protein
Length = 964
Score = 478 bits (1231), Expect = e-135
Identities = 310/959 (32%), Positives = 492/959 (50%), Gaps = 70/959 (7%)
Query: 642 IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNN------- 694
+ N V + N++S+S L +G+ K C S + + S +N
Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCC---SFDRDDMFYGSAPLDNGLHVLNQ 61
Query: 695 ---IYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFA 751
IY IR + ++ ++ ++WH RLGH + + I +L L L + +
Sbjct: 62 SMPIYNIRTKKFKSNDLN-------PTFLWHCRLGHINEKHIQKLHSDGL---LNSFDYE 111
Query: 752 SDALCEACQKGKFTKVPFNAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYS 811
S CE+C GK TK PF + S L L+H D+ GP+ T + G +Y + DD+S
Sbjct: 112 SYETCESCLLGKMTKAPFTGHSE-RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFS 170
Query: 812 RWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDHGGEFENDKFESLFDSYGISH 871
R+ +V + K +S F F +VQN+ I +RSD GGE+ + F GI
Sbjct: 171 RYGYVYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVS 230
Query: 872 DFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAEAVNTACYIPNRISVRPILN 931
+ P TPQ NGV ER+NRTL +M R+M+ T + FW A+ T+ ++ NR + +
Sbjct: 231 QLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-E 289
Query: 932 KTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYN- 990
KTPYE+W PN+S+ +GC Y + K KS KC +GY +KG+ FY+
Sbjct: 290 KTPYEIWTGKVPNLSFLKIWGCESYA--KRLITDKLGPKSDKCYFVGYPKETKGYYFYHP 347
Query: 991 TDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEE-DEPEEEAGP 1049
TD K +V A L KG + +V EE EP+ +
Sbjct: 348 TDNKVF------------------VVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPT 389
Query: 1050 SNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPS--EETLLSLKGL--VSLIEPKSI 1105
S ++ ++ E IL + RS P + ++ L + EP S
Sbjct: 390 SQ----EEHQLDLRRVVEPILVEPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSY 445
Query: 1106 DEAL---QDKEWILAMEEELNQFSKNDVWSLVKKPENVHVIGTKWVFRNKLNEKGEVVRN 1162
+EAL +W+ A + E+ S+N VW+LV P+ V I KW+F+ K++ G +
Sbjct: 446 EEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIY 505
Query: 1163 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISE 1222
KA LVA+GY Q GIDY ET++PVA L++IR+L++ + +++ + QMDVK+AFLNG + E
Sbjct: 506 KAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEE 565
Query: 1223 EVYVHQPPGFEDERKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFC 1282
VY+ QP GF V KL +S+YGLKQA R+W R + + E +F+R + + ++
Sbjct: 566 HVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYK 625
Query: 1283 KTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV--DQTP 1340
KT + + +YVDDI+ + L + + + F M MGE Y LGI++ D+
Sbjct: 626 KTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLN 685
Query: 1341 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEK------EDKSGKVCQKLYRGMI 1394
+ + Q Y ++L +FNM +S PM L K D+ ++ + Y I
Sbjct: 686 KIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAI 745
Query: 1395 GSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYK 1453
GS++Y + +RPD+ ++ + +R+QSDP E+H V+ I +YL+ T + L+Y + E
Sbjct: 746 GSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELV 805
Query: 1454 LSGYCDADYAGDRTERKSTFGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQM 1513
+SGY DA + D+ + +S G L VSW S +QST+A ST EAEYI+A+ + ++
Sbjct: 806 VSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEV 865
Query: 1514 LWMKHQLEDYQILES---NIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKG 1569
+W++ + + ++ S I +YCDN AI+ +K P H ++KHI+ +YH IR+ + +G
Sbjct: 866 VWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRG 924
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.332 0.142 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,314,313
Number of Sequences: 26719
Number of extensions: 1340244
Number of successful extensions: 5609
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4851
Number of HSP's gapped (non-prelim): 295
length of query: 1572
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1459
effective length of database: 8,299,349
effective search space: 12108750191
effective search space used: 12108750191
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0359.3