Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0358.5
         (189 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g20600 non-race specific disease resistance protein (NDR1)          66  1e-11
At3g11650 unknown protein                                              57  4e-09
At3g20590 non-race specific disease resistance protein, putative       55  2e-08
At4g05220 putative protein                                             54  6e-08
At1g61760 hypothetical protein                                         50  9e-07
At1g08160 unknown protein                                              48  3e-06
At3g20610 non-race specific disease resistance protein, putative       45  3e-05
At5g53730 putative protein                                             44  4e-05
At5g06320 NDR1/HIN1-like protein 3 (NHL3)                              44  4e-05
At2g27260 unknown protein                                              44  5e-05
At4g23930 unknown protein (At4g23930)                                  43  1e-04
At2g35980 similar to harpin-induced protein hin1 from tobacco          42  2e-04
At4g01410 putative hypoersensitive response protein                    42  3e-04
At2g35460 similar to harpin-induced protein hin1 from tobacco          42  3e-04
At5g56050 unknown protein                                              41  4e-04
At2g46300 unknown protein                                              39  0.002
At1g65690 unknown protein                                              39  0.002
At5g36970 putative protein                                             38  0.003
At2g27270 unknown protein                                              38  0.003
At5g22870 putative protein                                             37  0.005

>At3g20600 non-race specific disease resistance protein (NDR1)
          Length = 219

 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 48/178 (26%), Positives = 83/178 (45%), Gaps = 13/178 (7%)

Query: 4   GKRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSI-----EQHPGENGSIFYSLE 58
           G+      + FI   GL  L LWL+LR   P  S+    I     + +  +N ++ + + 
Sbjct: 11  GRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVR 70

Query: 59  IENPNKDSSIYYDDIILSF-------LYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNAR 111
            +NPNKD  IYYDD+ L+F       +       VG  T+  F+QG  K    +  V   
Sbjct: 71  CDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPL 130

Query: 112 HGAFKPLFKAISNATAELKVALTTRFQYKTWGIKSKFHGLHLQGILPIDSDGKLSRKK 169
           +     L   + N +A  ++ L T+ ++K    K+K +G+ +   + ++ DG  ++KK
Sbjct: 131 NNQ-TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKK 187


>At3g11650 unknown protein
          Length = 240

 Score = 57.4 bits (137), Expect = 4e-09
 Identities = 39/140 (27%), Positives = 64/140 (44%), Gaps = 13/140 (9%)

Query: 18  LGLLVLCLWLALRPKSPSYSVVFLSIEQHPGE-NGSIFYSLE----IENPNKDSSIYYDD 72
           LG+  L LWL  RP +  + V   ++ +   + N ++ YSL+    I NPN+   +YYD+
Sbjct: 66  LGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRVGVYYDE 125

Query: 73  IILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARH------GAFKPLFKAISNAT 126
             +S  YG Q  + G   + SF+QG   T  +   +  ++      GA   L     +  
Sbjct: 126 FSVSGYYGDQ--RFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGI 183

Query: 127 AELKVALTTRFQYKTWGIKS 146
             +   L    ++K W IKS
Sbjct: 184 YRINAKLRLSVRFKFWFIKS 203


>At3g20590 non-race specific disease resistance protein, putative
          Length = 220

 Score = 55.5 bits (132), Expect = 2e-08
 Identities = 53/195 (27%), Positives = 84/195 (42%), Gaps = 15/195 (7%)

Query: 4   GKRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVV-----FLSIEQHPGENGSIFYSLE 58
           G++      +FI    L  L LWL+LR K P  S+       LS      +N ++ + + 
Sbjct: 11  GRKCCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVR 70

Query: 59  IENPNKDSSIYYDDIILSF-------LYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNAR 111
            +NPNKD  IYYDD+ L+F               V   T+  F+QG  K    +  V   
Sbjct: 71  CDNPNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPL 130

Query: 112 HGAFKPLFKAISNATAELKVALTTRFQYKTWGIKSK-FHGLHLQGILPIDSDG-KLSRKK 169
           +     L   + N +A  ++ L T  ++K    K+K +  + +   + ++ DG K  +K 
Sbjct: 131 NNQ-TVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKAQKKG 189

Query: 170 KKYPLSRSSRKLARS 184
            K   S SS  L  S
Sbjct: 190 SKTKKSDSSLPLRSS 204


>At4g05220 putative protein
          Length = 226

 Score = 53.5 bits (127), Expect = 6e-08
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 12/162 (7%)

Query: 17  FLGLLVLCLWLALRPKSPSYSV---VFLSIEQHPG-ENGSIFYSLEIENPNKDSSIYYDD 72
           F+G++   LWL+LRP  P + +   V   ++Q  G EN  I +++ I NPN+   +Y+D 
Sbjct: 56  FVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDS 115

Query: 73  IILSFLYGQQEDKVGETTIGSFHQG------TGKTRSVYDTVNARHGAFKPLFKAISNAT 126
           +  S  Y  Q   +       F Q       TG       TVN+         +A     
Sbjct: 116 MEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVG 175

Query: 127 AELKVALTTRFQYKTWGIKSKFHGLHLQGILPIDSDGKLSRK 168
             L +  T RF+   W   SK H +H    + +  DG +  K
Sbjct: 176 FRLDIVSTIRFKLHRW--ISKHHRMHANCNIVVGRDGLILPK 215


>At1g61760 hypothetical protein
          Length = 224

 Score = 49.7 bits (117), Expect = 9e-07
 Identities = 47/171 (27%), Positives = 72/171 (41%), Gaps = 18/171 (10%)

Query: 18  LGLLVLCLWLALRPKSPSYSVVFLSIE--QHPG--ENGSIFYSLEIENPNKDSSIYYDDI 73
           LG++   LW++L+P  P   +   SI     P   E   I + +   NPN++  IYYD +
Sbjct: 55  LGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSM 114

Query: 74  ILSFLYGQQEDKVGETTI-GSFHQGTGKTRSVYD-------TVNARHGAFKPLFKAISNA 125
             S  Y  +E ++G T +   F+Q    T S+          VN          +     
Sbjct: 115 EGSVYY--KEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKI 172

Query: 126 TAELKVALTTRFQYKTWGIKSKFHGLHLQGILPIDSDGKL--SRKKKKYPL 174
              LKV    RF+  TW   SK H ++    + I  DG L  + K K+ P+
Sbjct: 173 MFRLKVRSMIRFKVYTW--HSKSHKMYASCYIEIGWDGMLLSATKDKRCPV 221


>At1g08160 unknown protein
          Length = 221

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 15/142 (10%)

Query: 18  LGLLVLCLWLALRPKSPSYSVVFLSIEQHP------GENGSIFYSLEIENPNKDSSIYYD 71
           +GL +L  +L LRPK   Y+V   S+++          N    Y ++  NP K  S+ Y 
Sbjct: 51  VGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYH 110

Query: 72  DIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARHGAFKPLFKAI------SNA 125
            + +S  +  Q   V    I  F Q   K  +  +T    H      F A       S  
Sbjct: 111 SMRISTAHHNQS--VAHKNISPFKQRP-KNETRIETQLVSHNVALSKFNARDLRAEKSKG 167

Query: 126 TAELKVALTTRFQYKTWGIKSK 147
           T E++V +T R  YKTW  +S+
Sbjct: 168 TIEMEVYITARVSYKTWIFRSR 189


>At3g20610 non-race specific disease resistance protein, putative
          Length = 222

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 43/169 (25%), Positives = 71/169 (41%), Gaps = 9/169 (5%)

Query: 11  LMEFIGFLGLLVLCLWLA-LRPKSPSYSVVFLSIEQH-----PGENGSIFYSLEIENPNK 64
           LM  +    LL LCLWL+ L    P  S+ +  I          +N ++ + + ++N N 
Sbjct: 17  LMTLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINA 76

Query: 65  DSSIYYDDIILSF--LYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARHGAFKPLFKAI 122
              IYY+D+ LSF          V   T+  F+QG  K    +      +     +   +
Sbjct: 77  KQGIYYEDLHLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQ-TVIQAVL 135

Query: 123 SNATAELKVALTTRFQYKTWGIKSKFHGLHLQGILPIDSDGKLSRKKKK 171
            N +A  +V L  + +YK    K+K + L     L ++ DG    K K+
Sbjct: 136 PNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKE 184


>At5g53730 putative protein
          Length = 213

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 5   KRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSV-------VFLSIEQHPGENGSIFYSL 57
           K F+ F   F G L L++  +WL L P+ P +S+       + L+       N S+  +L
Sbjct: 26  KLFFTFSTFFSGLL-LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTL 84

Query: 58  EIENPNKDSSIYYDDIILSFLY-GQQEDKVGETTIGSFHQ 96
             +NPNK   IYYD +++   Y GQQ     E ++  F+Q
Sbjct: 85  FSKNPNKKVGIYYDKLLVYAAYRGQQ--ITSEASLPPFYQ 122


>At5g06320 NDR1/HIN1-like protein 3 (NHL3)
          Length = 231

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 39/146 (26%), Positives = 65/146 (43%), Gaps = 17/146 (11%)

Query: 18  LGLLVLCLWLALRPKSPSYSVVFLSIEQHPGE-NGSIFYSLE----IENPNKDSSIYYDD 72
           LG+  L +WL  RP +  + V    + +   +   ++ Y+L+    I NPN+   +YYD+
Sbjct: 59  LGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDE 118

Query: 73  IILSFLYGQQEDKVGETTIGSFHQGTGKTRSV------YDTVNARHGAFKPLFKAISNA- 125
           I +   YG Q   +    I  F+QG   T  V         V    G  K L + +++  
Sbjct: 119 IEVRGYYGDQRFGM-SNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI 177

Query: 126 -TAELKVALTTRFQY---KTWGIKSK 147
              + K+ L  RF++   K+W  K K
Sbjct: 178 YRIDAKLRLKIRFKFGLIKSWRFKPK 203


>At2g27260 unknown protein
          Length = 243

 Score = 43.9 bits (102), Expect = 5e-05
 Identities = 24/97 (24%), Positives = 46/97 (46%), Gaps = 6/97 (6%)

Query: 5   KRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIF----YSLEIE 60
           +R ++    F+  LGL++   +L +RP+ P  ++  LS+      N  +       L+  
Sbjct: 60  RRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFR 119

Query: 61  NPNKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQG 97
           NPN   S++Y+  + +  Y +    + ET +  F QG
Sbjct: 120 NPNSKMSLHYETALCAMYYNRV--SLSETRLQPFDQG 154


>At4g23930 unknown protein (At4g23930)
          Length = 187

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 8/103 (7%)

Query: 14  FIGFLGLLVLCLWLAL-RPKSPSYSVVFLSIEQHPGENGSIFYSLE----IENPNKDSSI 68
           FI FL +  L ++L + RP+ P  SV  + +      N S+ ++      + NPN+ +  
Sbjct: 17  FIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFSAVRNPNRAAFS 76

Query: 69  YYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNAR 111
           +Y+++I  F YG   +++G T + +    +G+T+ +  T + +
Sbjct: 77  HYNNVIQLFYYG---NRIGYTFVPAGEIESGRTKRMLATFSVQ 116


>At2g35980 similar to harpin-induced protein hin1 from tobacco
          Length = 227

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 29/112 (25%), Positives = 50/112 (43%), Gaps = 8/112 (7%)

Query: 7   FYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQ--HPGENGSIFYSL----EIE 60
           F   ++  I  LG+  L  WL +RP++  + V   S+ +  H   +  + Y+L     + 
Sbjct: 41  FVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVR 100

Query: 61  NPNKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARH 112
           NPNK   +YYD I     Y  +  +    T+  F+QG   T  +  T   ++
Sbjct: 101 NPNKRIGLYYDRIEAHAYY--EGKRFSTITLTPFYQGHKNTTVLTPTFQGQN 150


>At4g01410 putative hypoersensitive response protein
          Length = 227

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 18  LGLLVLCLWLALRPKSPSYSVV-----FLSIEQHPGENGSIFYSLEIENPNKDSSIYYDD 72
           LG++ L LWL  RP  P  +VV      L+    P  + S+ +S+   NPN+  SI+YD 
Sbjct: 55  LGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLARNPNRRVSIHYDK 114

Query: 73  IILSFLYGQQ 82
           + +   Y  Q
Sbjct: 115 LSMYVTYKDQ 124


>At2g35460 similar to harpin-induced protein hin1 from tobacco
          Length = 238

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 18  LGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGS------IFYSLEIENPNKDSSIYYD 71
           LG++ L LW  LRP    + V    + +   +  S      I  +  I NPN+   I+YD
Sbjct: 65  LGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYD 124

Query: 72  DIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNAR 111
            + +   YG Q       T  SF+QG   T  V   +N +
Sbjct: 125 QLEVRGYYGDQRFSAANMT--SFYQGHKNTTVVGTELNGQ 162


>At5g56050 unknown protein
          Length = 283

 Score = 40.8 bits (94), Expect = 4e-04
 Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 8   YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGE-----NGSIFYSLEIENP 62
           ++F +  I F G+  L L+LA++P++P + +    +     E     NG +   L   NP
Sbjct: 108 FIFSILLIVF-GIATLILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNP 166

Query: 63  NKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTR 102
           NK  ++ ++++++   +   + K+    +  F Q  GKTR
Sbjct: 167 NKKLNVRFENLMVELWFA--DTKIATQGVLPFSQRNGKTR 204


>At2g46300 unknown protein
          Length = 252

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 37/150 (24%), Positives = 59/150 (38%), Gaps = 17/150 (11%)

Query: 11  LMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIE--------QHPGENGSIFYSLEIENP 62
           L  F+  +G  V  LW    PK P++S+    ++             + +    +E++NP
Sbjct: 69  LFIFLLLVGTAVFYLWFD--PKLPTFSLASFRLDGFKLADDPDGASLSATAVARVEMKNP 126

Query: 63  NKDSSIYYDD--IILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARH-----GAF 115
           N     YY +  + LS   G  E  +GETT+  F QG   + SV      ++     G  
Sbjct: 127 NSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQLVERGLA 186

Query: 116 KPLFKAISNATAELKVALTTRFQYKTWGIK 145
           K L     +    + V   T+      GIK
Sbjct: 187 KRLAAKFQSKDLVINVVAKTKVGLGVGGIK 216


>At1g65690 unknown protein
          Length = 252

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 8   YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFL-----SIEQHPGENGSIFYSLEIENP 62
           + FL+  +  +G  +  L+L  +PK P YS+  L     ++ Q      +   ++  +NP
Sbjct: 70  FCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNP 129

Query: 63  NKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVY 105
           N+   IYY+D     ++   E ++   ++  F+QG   T  +Y
Sbjct: 130 NEKIGIYYEDGSKITVW-YMEHQLSNGSLPKFYQGHENTTVIY 171


>At5g36970 putative protein
          Length = 248

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 29/102 (28%), Positives = 50/102 (48%), Gaps = 10/102 (9%)

Query: 8   YVFLMEF--IGFLGLLVLCLWLALRPKSPSYSVVFL-----SIEQHPGENGSIFYSLEIE 60
           Y  L+ F  I  +G +V  L+L  RPK P Y++  L      + Q    + +   ++  +
Sbjct: 64  YTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTITAK 123

Query: 61  NPNKDSSIYYDD-IILSFLYGQQEDKVGETTIGSFHQGTGKT 101
           NPN+   IYY+D   +S LY   + ++   ++  F+QG   T
Sbjct: 124 NPNEKIGIYYEDGSKISVLY--MQTRISNGSLPKFYQGHENT 163


>At2g27270 unknown protein
          Length = 231

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 6/67 (8%)

Query: 20  LLVLCL----WLALRPKSPSYSVVFLSIEQHPGENGSIFYSLEIENPNKDSSIYYDDIIL 75
           LL++C+    ++A++P+ P + +  L ++  P  N S+   L   NP+  SS+YY  I L
Sbjct: 68  LLIICVFAFNYIAIQPRVPRFMLEDLYVD--PLSNTSVIVKLSSTNPSYKSSVYYRKISL 125

Query: 76  SFLYGQQ 82
             L G++
Sbjct: 126 HVLVGEK 132


>At5g22870 putative protein
          Length = 207

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 8   YVFL----MEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGEN-----GSIFYSLE 58
           Y+FL    + F+  +G L+   WL  +PK   Y+V   S++     N      +  ++++
Sbjct: 28  YIFLVILTLIFMAAVGFLIT--WLETKPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQ 85

Query: 59  IENPNKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARHGA 114
             NPN   S+YY  + +   +  ++  +   T+  FHQ     + + +T+ A + A
Sbjct: 86  SHNPNHRISVYYSSVEIFVKF--KDQTLAFDTVEPFHQPRMNVKQIDETLIAENVA 139


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.138    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,225,454
Number of Sequences: 26719
Number of extensions: 176068
Number of successful extensions: 475
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 434
Number of HSP's gapped (non-prelim): 44
length of query: 189
length of database: 11,318,596
effective HSP length: 94
effective length of query: 95
effective length of database: 8,807,010
effective search space: 836665950
effective search space used: 836665950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)


Lotus: description of TM0358.5