BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0348.12
         (180 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g59400 unknown protein                                             120  3e-28
At3g57330 Ca2+-transporting ATPase-like protein                        28  2.7
At2g41560 putative Ca2+-ATPase                                         28  2.7
At4g22890 unknown protein                                              27  5.9
At4g11960 unknown protein                                              27  5.9
At5g17010 sugar transporter - like protein                             27  7.7
At4g03450 hypothetical protein                                         27  7.7
At3g54450 oligopeptide transporter -like protein                       27  7.7

>At5g59400 unknown protein
          Length = 299

 Score =  120 bits (302), Expect = 3e-28
 Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 9/136 (6%)

Query: 49  WLGSRSDV*YPRCSIRRQSTYADAEGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGI 108
           W GS+S V YPRCS+ RQSTYADAE     +  L    W +   FGS AC+ P  Y VG+
Sbjct: 106 WYGSKSVVKYPRCSLLRQSTYADAEDDASQVLLLA-TVWIMIFLFGSSACVLPTIYGVGL 164

Query: 109 AYQ-NAFGSGLSHGSHNPGLGFSIIV----NNIIFIVLGFVIGYPLASAPVKVIQGLWRN 163
            Y  + F SGL + S    L  S+ +    N I+  VLG   GYP+AS+ V+V++GLWRN
Sbjct: 165 VYGGDPFDSGLVYSSQ---LSSSVPILSKFNGILLSVLGPAFGYPIASSAVRVLKGLWRN 221

Query: 164 DLVALRGACPNCGEEL 179
           DL AL+G CPNCGEE+
Sbjct: 222 DLTALKGDCPNCGEEV 237


>At3g57330 Ca2+-transporting ATPase-like protein
          Length = 1025

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 135 NIIFIVLGFVIGYPLASAPVKVIQGLWRNDLVALRGA 171
           N++ +++ FV      SAP+  +Q LW N ++   GA
Sbjct: 812 NVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGA 848


>At2g41560 putative Ca2+-ATPase
          Length = 1030

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 135 NIIFIVLGFVIGYPLASAPVKVIQGLWRNDLVALRGA 171
           N++ +++ FV      SAP+  +Q LW N ++   GA
Sbjct: 815 NVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGA 851


>At4g22890 unknown protein
          Length = 324

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 164 DLVALRGACPNCGEE 178
           D + L+G CPNCG E
Sbjct: 264 DFLILKGPCPNCGTE 278


>At4g11960 unknown protein
          Length = 313

 Score = 26.9 bits (58), Expect = 5.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 164 DLVALRGACPNCGEE 178
           D + L+G CPNCG E
Sbjct: 253 DFLILKGPCPNCGTE 267


>At5g17010 sugar transporter - like protein
          Length = 503

 Score = 26.6 bits (57), Expect = 7.7
 Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 16/105 (15%)

Query: 68  TYADAEGRRIYLWFLH*QAWALFLAFGSLACLGPLSYAVGIAYQNAFGSGLSHGSHNPGL 127
           T AD  GRR  L      A  L+L    +  L P +Y+V I  +  +G  +    H   +
Sbjct: 113 TIADVIGRRKELIL----AALLYLVGALVTALAP-TYSVLIIGRVIYGVSVGLAMHAAPM 167

Query: 128 GFS----------IIVNNIIFIVLGFVIGYPLASAPVKVIQGLWR 162
             +          ++     FIVLG V GY + S  V V  G WR
Sbjct: 168 YIAETAPSPIRGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSG-WR 211


>At4g03450 hypothetical protein
          Length = 641

 Score = 26.6 bits (57), Expect = 7.7
 Identities = 20/60 (33%), Positives = 30/60 (49%), Gaps = 4/60 (6%)

Query: 101 PLSYAVGIAYQNAFGSGL-SHGSHNPGLGFSIIVNNIIFIVLGFVIGYPLASAPVKVIQG 159
           P  +   ++  +AF  G+ +   HNP L  SII  +IIF+   FV+ Y LA   +    G
Sbjct: 544 PALFVSLVSMSSAFFCGVVATTKHNPWLFDSIIFISIIFL---FVVAYLLAPYAIPQFPG 600


>At3g54450 oligopeptide transporter -like protein
          Length = 488

 Score = 26.6 bits (57), Expect = 7.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 127 LGFSIIVNNIIFIVLGFVIGYP 148
           LGFSII  +++  ++ F+IG P
Sbjct: 120 LGFSIIAGSVVIAIVIFLIGIP 141


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.340    0.149    0.512 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,873,515
Number of Sequences: 26719
Number of extensions: 144695
Number of successful extensions: 421
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 411
Number of HSP's gapped (non-prelim): 10
length of query: 180
length of database: 11,318,596
effective HSP length: 93
effective length of query: 87
effective length of database: 8,833,729
effective search space: 768534423
effective search space used: 768534423
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 57 (26.6 bits)