BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0346.4
(142 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36910 putative ABC transporter 146 3e-36
At3g28860 P-glycoprotein, putative 85 1e-17
At4g25960 P-glycoprotein-2 (pgp2) 81 2e-16
At1g10680 putative P-glycoprotein-2 emb|CAA71277 81 2e-16
At3g62150 P-glycoprotein-like proetin 80 4e-16
At2g47000 putative ABC transporter 79 8e-16
At5g39040 transporter associated with antigen processing-like pr... 78 1e-15
At4g01830 putative P-glycoprotein-like protein 78 2e-15
At3g28390 P-glycoprotein, putative 78 2e-15
At3g28360 P-glycoprotein like protein 78 2e-15
At4g01820 P-glycoprotein-like protein pgp3 77 3e-15
At1g02520 P-glycoprotein, putative 77 3e-15
At5g46540 multidrug resistance p-glycoprotein 76 5e-15
At1g28010 hypothetical protein 76 7e-15
At3g28380 P-glycoprotein, putative 75 9e-15
At1g27940 hypothetical protein 75 9e-15
At3g28344 P-glycoprotein, 5' partial 75 1e-14
At4g18050 multidrug resistance protein/P-glycoprotein - like 75 2e-14
At3g28415 putative protein 75 2e-14
At1g02530 hypothetical protein 74 3e-14
>At2g36910 putative ABC transporter
Length = 1286
Score = 146 bits (369), Expect = 3e-36
Identities = 75/82 (91%), Positives = 78/82 (94%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDRFMIGRTTL+IAHRLSTIRKADLVAVLQQGSVSEIGTHDEL SKGENGVYA
Sbjct: 543 KLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAK 602
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
L+KMQE AHETAM+NARKSSAR
Sbjct: 603 LIKMQEAAHETAMSNARKSSAR 624
Score = 76.6 bits (187), Expect = 4e-15
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
++VQEALD+ GRT++V+AHRLSTIR A ++AV+ G V+E G+H L +G+YA
Sbjct: 1199 RSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNHPDGIYAR 1258
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
++++Q H + SS+R
Sbjct: 1259 MIQLQRFTHTQVIGMTSGSSSR 1280
>At3g28860 P-glycoprotein, putative
Length = 1252
Score = 84.7 bits (208), Expect = 1e-17
Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQEALDR M+GRTT+V+AHRL TIR D +AV+QQG V E GTH+EL +K +G YA+L+
Sbjct: 542 VQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAK--SGAYASLI 599
Query: 115 KMQEMAHETAMNN 127
+ QEM +N
Sbjct: 600 RFQEMVGTRDFSN 612
Score = 69.3 bits (168), Expect = 6e-13
Identities = 34/63 (53%), Positives = 47/63 (73%), Gaps = 1/63 (1%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
+QEAL+R M GRTT+V+AHRLSTIR D + V+Q G + E G+H EL S+ E G Y+ L+
Sbjct: 1187 LQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPE-GAYSRLL 1245
Query: 115 KMQ 117
++Q
Sbjct: 1246 QLQ 1248
>At4g25960 P-glycoprotein-2 (pgp2)
Length = 1233
Score = 81.3 bits (199), Expect = 2e-16
Identities = 37/68 (54%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K+VQEALDR M+GRTT+V+AHRLST+R AD++AV+ +G + E G H+ L S +G Y++
Sbjct: 536 KSVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVHEGKIVEFGNHENLIS-NPDGAYSS 594
Query: 113 LVKMQEMA 120
L+++QE A
Sbjct: 595 LLRLQETA 602
Score = 63.5 bits (153), Expect = 4e-11
Identities = 31/66 (46%), Positives = 46/66 (68%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M RTT+V+AHRLSTI+ AD ++VL G + E G+H +L ++G Y
Sbjct: 1165 RVVQQALDRLMANRTTVVVAHRLSTIKNADTISVLHGGKIVEQGSHRKLV-LNKSGPYFK 1223
Query: 113 LVKMQE 118
L+ +Q+
Sbjct: 1224 LISLQQ 1229
>At1g10680 putative P-glycoprotein-2 emb|CAA71277
Length = 1227
Score = 80.9 bits (198), Expect = 2e-16
Identities = 39/68 (57%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALDR M+GRTT+V+AHRLST+R AD++AV+ G + E G+HDEL S +G Y++
Sbjct: 536 KIVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVGGGKIIESGSHDELIS-NPDGAYSS 594
Query: 113 LVKMQEMA 120
L+++QE A
Sbjct: 595 LLRIQEAA 602
Score = 68.2 bits (165), Expect = 1e-12
Identities = 31/66 (46%), Positives = 50/66 (74%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M RTT+V+AHRLSTI+ +D+++V+Q G + E G+H+ L + +NG Y+
Sbjct: 1157 RVVQQALDRLMRDRTTVVVAHRLSTIKNSDMISVIQDGKIIEQGSHNILV-ENKNGPYSK 1215
Query: 113 LVKMQE 118
L+ +Q+
Sbjct: 1216 LISLQQ 1221
>At3g62150 P-glycoprotein-like proetin
Length = 1292
Score = 80.1 bits (196), Expect = 4e-16
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+V+AHRLST+R AD++AV+ QG + E G+H EL E G Y+
Sbjct: 578 RIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHSELLRDPE-GAYSQ 636
Query: 113 LVKMQEMAHET---------AMNNARKSSAR*LSL 138
L+++QE +T +M + ++SS R SL
Sbjct: 637 LIRLQEDTKQTEDSTDEQKLSMESMKRSSLRKSSL 671
Score = 68.9 bits (167), Expect = 8e-13
Identities = 33/64 (51%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M+ RTT+V+AHRLSTI+ AD++AV++ G + E G H+ L + ++GVYA+
Sbjct: 1224 RVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINI-KDGVYAS 1282
Query: 113 LVKM 116
LV++
Sbjct: 1283 LVQL 1286
>At2g47000 putative ABC transporter
Length = 1286
Score = 79.0 bits (193), Expect = 8e-16
Identities = 40/82 (48%), Positives = 56/82 (67%), Gaps = 3/82 (3%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+V+AHRLST+R AD++AV+ QG + E G+H EL K G Y+
Sbjct: 559 RVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHTELL-KDPEGAYSQ 617
Query: 113 LVKMQE--MAHETAMNNARKSS 132
L+++QE + E A + SS
Sbjct: 618 LIRLQEEKKSDENAAEEQKMSS 639
Score = 70.9 bits (172), Expect = 2e-13
Identities = 34/64 (53%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M+ RTT+V+AHRLSTI+ AD++AV++ G + E G HD L + ++GVYA+
Sbjct: 1218 RVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINI-KDGVYAS 1276
Query: 113 LVKM 116
LV++
Sbjct: 1277 LVQL 1280
>At5g39040 transporter associated with antigen processing-like
protein (TAP2)
Length = 644
Score = 78.2 bits (191), Expect = 1e-15
Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQ+A+D M GRT LVIAHRLST++ AD VAV+ G V+E GTHDEL S NG+Y NLV
Sbjct: 574 VQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGEVAEKGTHDELLSL--NGIYTNLV 631
Query: 115 KMQ 117
K Q
Sbjct: 632 KRQ 634
>At4g01830 putative P-glycoprotein-like protein
Length = 1230
Score = 77.8 bits (190), Expect = 2e-15
Identities = 35/71 (49%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+++AHRLST+R AD++AV+ +G + E G+H EL K G Y+
Sbjct: 528 RVVQEALDRIMVNRTTVIVAHRLSTVRNADIIAVIHRGKIVEEGSHSELL-KDHEGAYSQ 586
Query: 113 LVKMQEMAHET 123
L+++QE+ E+
Sbjct: 587 LLRLQEINKES 597
Score = 73.9 bits (180), Expect = 3e-14
Identities = 35/64 (54%), Positives = 52/64 (80%), Gaps = 1/64 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M+ RTT+V+AHRLSTI+ AD++AV++ G ++E GTH+ L + E GVYA+
Sbjct: 1162 RVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLINI-EGGVYAS 1220
Query: 113 LVKM 116
LV++
Sbjct: 1221 LVQL 1224
>At3g28390 P-glycoprotein, putative
Length = 1225
Score = 77.8 bits (190), Expect = 2e-15
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 55 VQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYANLV 114
VQ+AL+R M+GRT++VIAHRLSTI+K D +AVL+ G+V E G H L +KG G Y +LV
Sbjct: 1159 VQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGAYFSLV 1218
Query: 115 KMQ 117
+Q
Sbjct: 1219 SLQ 1221
Score = 73.2 bits (178), Expect = 4e-14
Identities = 36/67 (53%), Positives = 50/67 (73%), Gaps = 1/67 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALD IGRTT+VIAHRLSTIR AD++ V+ G + E G+H+EL K +G Y +
Sbjct: 522 RVVQEALDNASIGRTTIVIAHRLSTIRNADVICVVHNGRIIETGSHEELLEK-LDGQYTS 580
Query: 113 LVKMQEM 119
LV++Q++
Sbjct: 581 LVRLQQV 587
>At3g28360 P-glycoprotein like protein
Length = 1158
Score = 77.8 bits (190), Expect = 2e-15
Identities = 38/75 (50%), Positives = 54/75 (71%), Gaps = 2/75 (2%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALD +GRTT+VIAHRLSTIR AD++ VL G + E G+HD+L +G Y +
Sbjct: 451 RVVQEALDNASVGRTTIVIAHRLSTIRNADIICVLHNGCIVETGSHDKLME--IDGKYTS 508
Query: 113 LVKMQEMAHETAMNN 127
LV++Q+M +E + +N
Sbjct: 509 LVRLQQMKNEESCDN 523
Score = 72.4 bits (176), Expect = 8e-14
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+AL+ M+G+T++VIAHRLSTI+ D +AVL +G V E GTH L +KG G Y +
Sbjct: 1088 RVVQDALEHVMVGKTSVVIAHRLSTIQNCDTIAVLDKGKVVESGTHASLLAKGPTGSYFS 1147
Query: 113 LVKMQ 117
LV +Q
Sbjct: 1148 LVSLQ 1152
>At4g01820 P-glycoprotein-like protein pgp3
Length = 1229
Score = 77.0 bits (188), Expect = 3e-15
Identities = 35/70 (50%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+++AHRLST+R AD++AV+ +G + E G+H EL K G YA
Sbjct: 523 RVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGSHSELL-KDHEGAYAQ 581
Query: 113 LVKMQEMAHE 122
L+++Q++ E
Sbjct: 582 LIRLQKIKKE 591
Score = 72.4 bits (176), Expect = 8e-14
Identities = 35/64 (54%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M+ RTT+V+AHRLSTI+ AD++AV++ G + E GTH+ L + E GVYA+
Sbjct: 1161 RVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGTHETLINI-EGGVYAS 1219
Query: 113 LVKM 116
LV++
Sbjct: 1220 LVQL 1223
>At1g02520 P-glycoprotein, putative
Length = 1278
Score = 77.0 bits (188), Expect = 3e-15
Identities = 40/74 (54%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR M+ RTT+V+AHRLSTI+ AD++AV++ G ++E GTH+ L K E GVYA+
Sbjct: 1210 RVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLI-KIEGGVYAS 1268
Query: 113 LVKMQEMAHETAMN 126
LV++ H TA N
Sbjct: 1269 LVQL----HMTASN 1278
Score = 76.6 bits (187), Expect = 4e-15
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+++AHRLST+R AD++AV+ +G + E G+H EL K G Y+
Sbjct: 556 RVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGSHSELL-KDSEGAYSQ 614
Query: 113 LVKMQEMAHETAMNNARKSSA 133
L+++QE+ + + S+
Sbjct: 615 LIRLQEINKDVKTSELSSGSS 635
>At5g46540 multidrug resistance p-glycoprotein
Length = 1248
Score = 76.3 bits (186), Expect = 5e-15
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+AL + M+ RTT+V+AHRL+TIR AD++AV+QQG V E GTHDE+ K G Y+
Sbjct: 532 RIVQDALVKLMLSRTTVVVAHRLTTIRTADMIAVVQQGKVIEKGTHDEMI-KDPEGTYSQ 590
Query: 113 LVKMQE 118
LV++QE
Sbjct: 591 LVRLQE 596
Score = 61.6 bits (148), Expect = 1e-10
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALD+ M+ RTT+V+AH L+TI+ AD++AV++ G ++E G H+ L + G YA+
Sbjct: 1181 RVVQDALDQVMVNRTTVVVAHLLTTIKDADMIAVVKNGVIAESGRHETL-MEISGGAYAS 1239
Query: 113 LVKMQEMAH 121
LV A+
Sbjct: 1240 LVAFNMSAN 1248
>At1g28010 hypothetical protein
Length = 1247
Score = 75.9 bits (185), Expect = 7e-15
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALD+ M GRTT+++AHRLSTIRKAD + VL +G V E G+H EL SK + G Y
Sbjct: 1181 KQVQEALDKLMKGRTTILVAHRLSTIRKADTIVVLHKGKVVEKGSHRELVSKSD-GFYKK 1239
Query: 113 LVKMQE 118
L +QE
Sbjct: 1240 LTSLQE 1245
Score = 72.0 bits (175), Expect = 1e-13
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQ+ALD M RTT+VIAHRLSTIR D + VL+ G V E G+H EL S+G G YA
Sbjct: 547 KIVQQALDNVMEKRTTIVIAHRLSTIRNVDKIVVLRDGQVRETGSHSELISRG--GDYAT 604
Query: 113 LVKMQEMAHETAMNNARKSSAR 134
LV Q+ + + + S R
Sbjct: 605 LVNCQDTEPQENLRSVMYESCR 626
>At3g28380 P-glycoprotein, putative
Length = 1240
Score = 75.5 bits (184), Expect = 9e-15
Identities = 39/79 (49%), Positives = 54/79 (67%), Gaps = 1/79 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQE+LD IGRTT+VIAHRLSTIR AD++ V+ G + E G+H+EL K +G Y +
Sbjct: 534 RVVQESLDNASIGRTTIVIAHRLSTIRNADVICVIHNGQIVETGSHEELL-KRIDGQYTS 592
Query: 113 LVKMQEMAHETAMNNARKS 131
LV +Q+M +E + N S
Sbjct: 593 LVSLQQMENEESNVNINVS 611
Score = 71.6 bits (174), Expect = 1e-13
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+AL+R M+GRT+++IAHRLSTI+ D++ VL +G + E GTH L KG G Y +
Sbjct: 1172 RVVQDALERVMVGRTSIMIAHRLSTIQNCDMIVVLGKGKIVESGTHSSLLEKGPTGTYFS 1231
Query: 113 LVKMQ 117
L +Q
Sbjct: 1232 LAGIQ 1236
>At1g27940 hypothetical protein
Length = 1245
Score = 75.5 bits (184), Expect = 9e-15
Identities = 41/67 (61%), Positives = 49/67 (72%), Gaps = 1/67 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQEALD+ M GRTT+++AHRLSTIRKAD VAVL +G V E G+H EL S NG Y
Sbjct: 1179 KLVQEALDKLMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGSHRELVSI-PNGFYKQ 1237
Query: 113 LVKMQEM 119
L +QE+
Sbjct: 1238 LTSLQEV 1244
Score = 71.2 bits (173), Expect = 2e-13
Identities = 44/94 (46%), Positives = 55/94 (57%), Gaps = 11/94 (11%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
K VQ+ALD M RTT+V+AHRLSTIR D + VL+ G V E G+H EL +G G YA
Sbjct: 546 KIVQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELMLRG--GDYAT 603
Query: 113 LVKMQE---------MAHETAMNNARKSSAR*LS 137
LV QE + ET + A SS+R +S
Sbjct: 604 LVNCQETEPQENSRSIMSETCKSQAGSSSSRRVS 637
>At3g28344 P-glycoprotein, 5' partial
Length = 626
Score = 75.1 bits (183), Expect = 1e-14
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+AL+R M+GRT++VIAHRLSTI+ D +AVL +G + E GTH L SKG G+Y +
Sbjct: 565 RVVQDALERVMVGRTSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFS 624
Query: 113 LV 114
LV
Sbjct: 625 LV 626
>At4g18050 multidrug resistance protein/P-glycoprotein - like
Length = 1323
Score = 74.7 bits (182), Expect = 2e-14
Identities = 38/81 (46%), Positives = 55/81 (66%), Gaps = 1/81 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+AL M RTT+V+AHRL+TIR AD++AV+ QG + E GTHDE+ E G Y+
Sbjct: 530 RIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQDPE-GAYSQ 588
Query: 113 LVKMQEMAHETAMNNARKSSA 133
LV++QE + E A + R ++
Sbjct: 589 LVRLQEGSKEEATESERPETS 609
Score = 61.2 bits (147), Expect = 2e-10
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDEL 101
+ VQ+ALDR M+ RTT+V+AHRL+TI+ AD++AV++ G ++E G H+ L
Sbjct: 1211 RVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETL 1259
>At3g28415 putative protein
Length = 1098
Score = 74.7 bits (182), Expect = 2e-14
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALD IGRTT+VIAHRLSTIR D++ V + G + E G+H+EL + +G Y +
Sbjct: 513 RVVQEALDNATIGRTTIVIAHRLSTIRNVDVICVFKNGQIVETGSHEEL-MENVDGQYTS 571
Query: 113 LVKMQEMAHETAMNNARKS 131
LV++Q M +E + +N S
Sbjct: 572 LVRLQIMENEESNDNVSVS 590
>At1g02530 hypothetical protein
Length = 1273
Score = 73.9 bits (180), Expect = 3e-14
Identities = 35/67 (52%), Positives = 49/67 (72%), Gaps = 1/67 (1%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQEALDR M+ RTT+V+AHRLST+R AD++AV+ G + E G+H EL K G Y+
Sbjct: 543 RVVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHSGKMVEKGSHSELL-KDSVGAYSQ 601
Query: 113 LVKMQEM 119
L++ QE+
Sbjct: 602 LIRCQEI 608
Score = 73.2 bits (178), Expect = 4e-14
Identities = 37/74 (50%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 53 KAVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELCSKGENGVYAN 112
+ VQ+ALDR ++ RTT+V+AHRLSTI+ AD++A+++ G ++E GTH+ L K + GVYA+
Sbjct: 1205 RLVQDALDRVIVNRTTVVVAHRLSTIKNADVIAIVKNGVIAENGTHETLI-KIDGGVYAS 1263
Query: 113 LVKMQEMAHETAMN 126
LV++ H TA N
Sbjct: 1264 LVQL----HMTASN 1273
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.335 0.142 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,591,806
Number of Sequences: 26719
Number of extensions: 82623
Number of successful extensions: 421
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 335
Number of HSP's gapped (non-prelim): 77
length of query: 142
length of database: 11,318,596
effective HSP length: 89
effective length of query: 53
effective length of database: 8,940,605
effective search space: 473852065
effective search space used: 473852065
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0346.4