BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0344.19
(654 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34320 hypothetical protein 905 0.0
At5g08660 putative protein 634 0.0
At1g30750 unknown protein 353 1e-97
At3g23160 hypothetical protein 97 2e-20
At5g51670 unknown protein 91 3e-18
At5g04550 unknown protein 77 4e-14
At5g41140 putative protein 37 0.045
At3g13640 RNase L inhibitor, putative 36 0.059
At1g67230 unknown protein 36 0.059
At1g63300 hypothetical protein 36 0.059
At5g58360 similar to unknown protein (gb|AAB63094.1) 34 0.29
At5g62410 chromosomal protein - like 33 0.50
At1g30135 unknown protein 33 0.65
At4g11170 RPP1-WsA-like disease resistance protein 32 0.85
At5g54090 DNA mismatch repair protein MutS2-like 32 1.1
At4g20210 cadinene synthase like protein 32 1.1
At1g17610 disease resistance protein, putative 32 1.1
At3g22790 unknown protein 32 1.5
At1g24160 unknown protein 32 1.5
Atmg00290 -mitochondrial genome- ribosomal protein S4 (RPS4) 31 1.9
>At1g34320 hypothetical protein
Length = 657
Score = 905 bits (2339), Expect = 0.0
Identities = 483/668 (72%), Positives = 552/668 (82%), Gaps = 27/668 (4%)
Query: 1 MGGICSRSWKATVDGVAVDNALDGSSRNANGHA--NNEPGTTYQTGHINSNSNLRPIDDE 58
MGG+CSRS +V+NA G+ + NGH NN +G + P+ +
Sbjct: 1 MGGLCSRS-------SSVNNAPGGTFAHVNGHHLNNNASDLNSHSGESGLKDDPSPVTEN 53
Query: 59 SD--KHQRESFSFSALDKLSYGTSGDDINDGIPSLSRALSHKSRSTRSRQAAV-KVSEVS 115
D KH ESFSF + S G+ +I DGIP LSR LS KSRST+SRQAAV KVSEVS
Sbjct: 54 VDDNKHTSESFSFPIV---SSGSHPQNIEDGIPRLSRVLSQKSRSTKSRQAAVAKVSEVS 110
Query: 116 SLLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGVATKGNKISILAFEVANTIVKGA 175
SLLGRAGT GLGKAV+VLDTLGSSMTNLNLS GF+S KGNKISIL+FEVANTIVKGA
Sbjct: 111 SLLGRAGTMGLGKAVDVLDTLGSSMTNLNLSGGFSSATTVKGNKISILSFEVANTIVKGA 170
Query: 176 NLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGNR 235
NLM SLS+++I HLKEVVLPSEGVQNLIS+DM+ELLRIAAADKREEL+IFSGEVVRFGNR
Sbjct: 171 NLMHSLSKDSITHLKEVVLPSEGVQNLISKDMDELLRIAAADKREELRIFSGEVVRFGNR 230
Query: 236 CKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALDRFDQD 295
CKDPQ+HNLDR+F++LGSE TPQK LK+EAE +M Q+M++V +TA+LYHELHALDRF+QD
Sbjct: 231 CKDPQYHNLDRFFDRLGSEFTPQKHLKQEAETIMHQMMSFVHFTADLYHELHALDRFEQD 290
Query: 296 YRRKLQEEDNSNATQR--GDSLAILRSELKSQKKHVRNLKKKSLWSKILEEVMEKFVDVV 353
Y+RK+QEE+N + QR GD+LAILR+ELKSQKKHVRNLKKKSLWS+ILEEVMEK VDVV
Sbjct: 291 YQRKIQEEENPSTAQRGVGDTLAILRTELKSQKKHVRNLKKKSLWSRILEEVMEKLVDVV 350
Query: 354 NFLYLEIHEAFGSADPDKQVKDSQGNHKKLGSAGLALHYANIITQIDTLVSRSSSVPPNT 413
+FL+LEIHEAFG ADPDK D NHKKLGSAGLALHYANIITQIDTLVSRSS++P +T
Sbjct: 351 HFLHLEIHEAFGGADPDKPANDPPINHKKLGSAGLALHYANIITQIDTLVSRSSTMPAST 410
Query: 414 RDTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFG 473
RD LYQGLPP++KSALR+R+QSFQVKEELTV QIKAEMEKTLQWLVP+ATNTTKAHHGFG
Sbjct: 411 RDALYQGLPPSIKSALRSRIQSFQVKEELTVPQIKAEMEKTLQWLVPVATNTTKAHHGFG 470
Query: 474 WVGEWANTGSDVNRKPAGQTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQVRVGNG- 532
WVGEWA++GS+ N++PAGQT +LRI+TLHHADKEKTEAYIL+LVVWLHHLV+QVR G
Sbjct: 471 WVGEWASSGSEANQRPAGQT-ILRIDTLHHADKEKTEAYILDLVVWLHHLVTQVRATTGY 529
Query: 533 GIRSPAKSPIRSPTQKTGQLF--THKGCSTSPMLTFEDQQMLRDVSKRKLTPGISKSQEF 590
G+RSP KSPIRSP QKT QL +H P+LT EDQ+MLRDVSKR+ TPGISKSQEF
Sbjct: 530 GLRSPVKSPIRSPNQKTIQLSSGSHNPSMGLPLLTTEDQEMLRDVSKRRKTPGISKSQEF 589
Query: 591 ST-AKTRLSKHHRLSKSSSHSP----ISESKNDMFSTRRVLPSVPVIDFDIDRMKALDVI 645
T AK RL KHHRLSKSSSHSP + ++K D FSTRR SVP+IDFDIDRMKALDVI
Sbjct: 590 ETVAKARLCKHHRLSKSSSHSPMMGEMMKNKKDTFSTRRP-SSVPIIDFDIDRMKALDVI 648
Query: 646 DRVDTIGS 653
DRVDTI S
Sbjct: 649 DRVDTIRS 656
>At5g08660 putative protein
Length = 649
Score = 634 bits (1636), Expect = 0.0
Identities = 355/656 (54%), Positives = 461/656 (70%), Gaps = 30/656 (4%)
Query: 1 MGGICSRSWKATVDGVAVDNALDGSSRNANGH----ANNEPGTTYQTGHINSNSNLRPID 56
MG CS+S G+ + GSS +G +++P QT I +
Sbjct: 1 MGSFCSKSL-----GINFGSEYSGSSVADDGREPDFGHSQPNG--QTSLIVPGMRQLMVK 53
Query: 57 DESDKHQ-RESFSFSALDKLSYGTSGDDINDGIPSLSRALSHKSRSTRSRQAAV-KVSEV 114
D +++Q ++ FSF + + D+ DGIP+ + A S K RS +S Q AV KV+E
Sbjct: 54 DVKEQNQLKDVFSFRERE------AEDNFYDGIPTYTMAPSQKIRSAKSTQTAVSKVTEA 107
Query: 115 SSLLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGVATKGNKISILAFEVANTIVKG 174
S LLG+AG LG+A +VLDTLGSSMT+L+ S GFTSGVATKGN++ ILAFEVANTIVK
Sbjct: 108 SKLLGKAG---LGRAKDVLDTLGSSMTDLS-SGGFTSGVATKGNELGILAFEVANTIVKS 163
Query: 175 ANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGN 234
+NL++SLS+ NI+HLK +L SEGVQNL+S D +ELLR+ AADKR+EL++FSGEVVRFGN
Sbjct: 164 SNLIESLSKRNIEHLKGTILYSEGVQNLVSNDFDELLRLVAADKRQELQVFSGEVVRFGN 223
Query: 235 RCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALDRFDQ 294
R KD QWHNL RYF+++ ELTPQ+QLKE+A +V+ QLM VQYTAELY EL L R ++
Sbjct: 224 RSKDFQWHNLQRYFDRISKELTPQRQLKEDAVLVVDQLMVLVQYTAELYQELQVLYRLEK 283
Query: 295 DYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKSLWSKILEEVMEKFVDVVN 354
DY +K +EE+NS + +GD LAIL++ELK+Q+K V++LKKKSLWS+ EEVMEK VD+V+
Sbjct: 284 DYEQKRREEENSANSSKGDGLAILKTELKAQRKVVKSLKKKSLWSRGFEEVMEKLVDIVH 343
Query: 355 FLYLEIHEAFGSADPDKQVKDSQGNHKKLGSAGLALHYANIITQIDTLVSRSSSVPPNTR 414
FL LEIH FG AD K + K+LG AGLALHYANII QIDTLV+R+SS+ N R
Sbjct: 344 FLLLEIHNIFGGADDQPSKKGAAEYDKRLGPAGLALHYANIIVQIDTLVARASSITSNAR 403
Query: 415 DTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGW 474
D+LYQ LPP +K ALR++++SF V +EL+V QIK EME+TL WLVP+A NTTKAHHGFGW
Sbjct: 404 DSLYQSLPPGIKLALRSKIKSFNVDKELSVTQIKDEMERTLHWLVPVAGNTTKAHHGFGW 463
Query: 475 VGEWANTGSDVNRKPAGQTDLLRIETLHHADKEKTEAYILELVVWLHHLVSQVRVGNGGI 534
VGEWANTG+D KP+G D+LRIETL+HA KEKTE YIL ++WL HLV++ + G
Sbjct: 464 VGEWANTGTDFTSKPSG-GDILRIETLYHASKEKTEIYILGQIIWLQHLVTKAKSDARG- 521
Query: 535 RSPAKSPIRSPTQKTGQLFTHKGCSTSPMLTFEDQQMLRDVSKRKLTPGISKSQEFSTAK 594
P S I+SP T Q + S P++T E+Q+ML++ SKRK TP +SKSQ+F +
Sbjct: 522 -GPRLSSIKSPLDTTNQQLISEPLSV-PIVTDEEQKMLQEASKRKRTPCVSKSQDFDSEY 579
Query: 595 TRLSKHHRLSKSSSH-SPISESKNDMFSTRRVLPSVPVIDFDIDRMKALDVIDRVD 649
+R K LSKSS + + SK+ + +R P++DF ID+ K LDVIDRVD
Sbjct: 580 SRARKCDPLSKSSEYFRGVRRSKS--AAVKRYSSGFPLLDFAIDKEKVLDVIDRVD 633
>At1g30750 unknown protein
Length = 744
Score = 353 bits (907), Expect = 1e-97
Identities = 217/521 (41%), Positives = 302/521 (57%), Gaps = 85/521 (16%)
Query: 105 RQAAVKVSEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGV-ATKGNKISIL 163
R + K + +S +GRAG GL KAVEVLDTLGSSMT +N S+ + SGV +++G K++IL
Sbjct: 69 RNDSTKFMQRNSFMGRAGVMGLEKAVEVLDTLGSSMTRMNPSNAYLSGVTSSRGGKVTIL 128
Query: 164 AFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELK 223
AFEVANTI KGA L+QSLS+EN+K +K+ +L SE V+ L+S D EL +AA+DKREEL
Sbjct: 129 AFEVANTIAKGAALLQSLSEENLKFMKKDMLHSEEVKKLVSTDTTELQILAASDKREELD 188
Query: 224 IFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELY 283
+FSGEV+RFGN CKD QW
Sbjct: 189 LFSGEVIRFGNMCKDLQW------------------------------------------ 206
Query: 284 HELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKSLWSKILE 343
H LDR Y KL E++ + +L+ + +++ + + L + +
Sbjct: 207 ---HNLDR----YFMKLDTENSQHK--------LLKDDAEARMQELVTLAR-------IT 244
Query: 344 EVMEKFVDVVNFLYLEIHEAFGSADPDKQVKDSQGNH--KKLGSAGLALHYANIITQIDT 401
++EK VDVV+++ I E FG+ ++D++G ++LG AGL+LHYAN+I QID
Sbjct: 245 SIIEKLVDVVSYIRQTIVEVFGN----NGLRDNEGEQGRERLGEAGLSLHYANLIQQIDN 300
Query: 402 LVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEELTVQQIKAEMEKTLQWLVPI 461
+ SR SS+P N RDTLY LP VK+ALR RLQ+ +EEL+V +IKAEMEK+LQWLVP
Sbjct: 301 IASRPSSLPSNVRDTLYNALPATVKTALRPRLQTLDQEEELSVPEIKAEMEKSLQWLVPF 360
Query: 462 ATNTTKAHHGFGWVGEWANTGSDVNR---KPAGQTDLLRIETLHHADKEKTEAYILELVV 518
A NTTKAH GFGWVGEWAN+ + + K + R++TLHHADK ++Y+LELVV
Sbjct: 361 AENTTKAHQGFGWVGEWANSRIEFGKGKGKGENNGNPTRLQTLHHADKPIVDSYVLELVV 420
Query: 519 WLHHLVSQVRVGNGGIRSPAKSPIRSPTQKTGQLFTHKGCSTSPMLTFEDQQMLRD---- 574
WLH L+ + G++ + + P +T ++ S SP T+++Q L D
Sbjct: 421 WLHRLMKSSKKRAHGVKLQETNHVSPPNNRT---ISNTQLSLSPDFTYKNQLSLEDRLLL 477
Query: 575 --VSKRKLTPGISKSQEFSTAKTRLS--KHHRLSKSSSHSP 611
V + P +SKSQE K K LS+S+ +SP
Sbjct: 478 DRVQSIRFGPNLSKSQELVGLKKNKKGFKIWALSRSTGNSP 518
>At3g23160 hypothetical protein
Length = 522
Score = 97.4 bits (241), Expect = 2e-20
Identities = 62/209 (29%), Positives = 110/209 (51%), Gaps = 9/209 (4%)
Query: 160 ISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKR 219
I IL+FEVAN + K +L +SLS I LK V SEGV+ L+S D N LL ++ ++K
Sbjct: 34 IGILSFEVANVMSKTIHLHRSLSDTEISKLKAEVFHSEGVRKLVSSDENHLLDLSVSEKL 93
Query: 220 EELKIFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQ---LKEEAEVVMQQLMTYV 276
++L + V R G +C +P + +E + + ++ L ++ E +++++ +V
Sbjct: 94 DDLSRVASVVSRLGKKCNEPALQGFEHVYEDIVNGAIDFRKLGFLVKDMESMVKKMERFV 153
Query: 277 QYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKS 336
T LY E+ ++ +Q KLQ + Q +S+ +L Q++ V++L+ S
Sbjct: 154 NATCSLYCEMEVMNELEQAI-VKLQ-----RSQQHQESVKAFEQKLMWQRQDVKSLRDGS 207
Query: 337 LWSKILEEVMEKFVDVVNFLYLEIHEAFG 365
LW++ ++V+E V +Y I FG
Sbjct: 208 LWNQTYDKVVEMLARTVCTIYGRIETVFG 236
Score = 73.9 bits (180), Expect = 3e-13
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 383 LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSF----QV 438
+G + L+LHYAN++ ++ L+ + RD LYQ LP ++K+ L+ L+S+ +
Sbjct: 352 IGGSALSLHYANVVIVVEKLLKYPHLIGEEARDDLYQMLPTSLKTTLKASLRSYLKNISI 411
Query: 439 KEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDLLRI 498
+ K ++ L WL P+ AH+ W E + + +T++L +
Sbjct: 412 YDAPLAHDWKETIDGILSWLAPL------AHNMIRWQSE---RNFEQQNQIVKRTNVLLL 462
Query: 499 ETLHHADKEKTEAYILELVVWLHHL 523
+TL+ AD+EKTEA I +L+V L+++
Sbjct: 463 QTLYFADREKTEAAICKLLVGLNYI 487
>At5g51670 unknown protein
Length = 369
Score = 90.5 bits (223), Expect = 3e-18
Identities = 73/272 (26%), Positives = 123/272 (44%), Gaps = 58/272 (21%)
Query: 301 QEEDNSNATQRGDSLAI--LRSELKSQKKHVRNLKKKSLWSKILEEVMEKFVDVVNFLYL 358
+EED N + D + + L+++++ QK+HV+ LK +SLW+K + V+ V
Sbjct: 84 EEEDYEN---KKDVMKVIDLQNKIERQKQHVKYLKDRSLWNKSFDTVVLILARSVFTALA 140
Query: 359 EIHEAFGSA------------------------------DPDKQVKDSQGNHKK------ 382
+ F SA P+ + +D
Sbjct: 141 RLKSVFSSAAATGYMVPTVVSSLPRSLSSSSSSMNLVHPSPNDEERDKTTTSSAFLEESS 200
Query: 383 ---------LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRL 433
LG AG+ALHYAN+I ++ ++ + V + RD LY LP +V+S+LR+RL
Sbjct: 201 RLLKPPETTLGGAGVALHYANLIVVMEKMIKQPQLVGLDARDDLYSMLPASVRSSLRSRL 260
Query: 434 Q--SFQVKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAG 491
+ F + + KA + + L+WL+P+A N + W E + +
Sbjct: 261 KGVGFTATDGGLATEWKAALGRILRWLLPLAQNMIR------WQSERSFEQQHMATATNS 314
Query: 492 QTDLLRIETLHHADKEKTEAYILELVVWLHHL 523
Q ++ ++TL ADK KTEA I EL+V L+++
Sbjct: 315 QNRVMLVQTLVFADKVKTEAAITELLVGLNYI 346
>At5g04550 unknown protein
Length = 599
Score = 76.6 bits (187), Expect = 4e-14
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 160 ISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKR 219
+ +LAFEVA+ + K +L QSLS +N+ L++ + S G++ L+S D + ++R+ +
Sbjct: 26 LGVLAFEVASLLSKLVHLWQSLSDKNVARLRDEITHSTGIKKLVSEDDDFIVRLIRDEMM 85
Query: 220 EELKIFSGEVVRFGNRCKDPQWHNLDRYFE---KLGSELTPQKQLKEEAEVVMQQLMTYV 276
E ++ + V R +C DP+ + F K G++ + ++ + +++ ++
Sbjct: 86 ENVENVAKAVARLARKCNDPKLKCFENCFSDMMKTGADPYGWQFGWKKMDKKAKKMERFI 145
Query: 277 QYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKS 336
A LY E L +Q ++R + N +AT D+L + ++ ++ V+NL+ S
Sbjct: 146 SSNASLYQETEILADLEQTFKRM---KSNESAT---DNLLEYQKKVTWKRHEVKNLRDVS 199
Query: 337 LWSKILEEVMEKFVDVVNFLYLEIHEAFG 365
LW++ + + V V + FG
Sbjct: 200 LWNRTYDYTVILLVRSVFTILSRTKHVFG 228
Score = 73.6 bits (179), Expect = 3e-13
Identities = 48/148 (32%), Positives = 79/148 (52%), Gaps = 17/148 (11%)
Query: 383 LGSAGLALHYANIITQIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQ----- 437
LG+A LALHYAN+I I+ V+ + + RD LY LP +V+++LR RL+ +
Sbjct: 433 LGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPASVRTSLRERLKPYSKNLSS 492
Query: 438 --VKEELTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWVGEWANTGSDVNRKPAGQTDL 495
V + ++ M L+WL P+A N K W + S ++ +T +
Sbjct: 493 STVYDPGLAREWTDAMAGILEWLGPLAHNMIK----------WQSERSYEHQSLVSRTHI 542
Query: 496 LRIETLHHADKEKTEAYILELVVWLHHL 523
+ +TL A+++KTEA I EL+V L+++
Sbjct: 543 VLAQTLFFANQQKTEAIITELLVGLNYV 570
>At5g41140 putative protein
Length = 983
Score = 36.6 bits (83), Expect = 0.045
Identities = 75/360 (20%), Positives = 143/360 (38%), Gaps = 38/360 (10%)
Query: 4 ICSRSWKATVD-GVAVDNALDGSS------RNANGHANNEPGTTYQTGHINSNSNLRPID 56
I W + D G++ D++++ S+ N + G + ++L ++
Sbjct: 253 ISESEWSGSSDQGISTDDSMNSSNDTIPRDTTRTSSDNEVDKLKAELGALARRTDLSELE 312
Query: 57 DESDKHQRESFSFSALDKLSYGTSGDDINDGIPSLSRALSHKSRSTRSRQAAVKVSEVSS 116
+S + Q + + D L TS D L +A + ++++ R+ K+
Sbjct: 313 LQSLRKQIVKETKRSQDLLREVTSLKQERD----LLKADNESNKASDKRKEEAKIRNKLQ 368
Query: 117 LLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGVATKGNKISILAFEVANTIVKGAN 176
L GR L + E LD +NL L T + N ILA + +
Sbjct: 369 LEGRDPHVLLEETREELDYEKDLNSNLRLQLQKTQ----ESNTELILAVQDLEAM----- 419
Query: 177 LMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGNRC 236
E + K V LP + + + + D E+ K E+V+
Sbjct: 420 -------EGQRTKKTVDLPGPRTCERNTEESRRMSCTSETDDDEDQKALD-ELVKGHMDA 471
Query: 237 KDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHEL-HALDRFDQD 295
K+ H L+R L +E+ K+ KE+ E+ ++QL + + H++ + L++
Sbjct: 472 KEA--HVLERRITDLYNEIEIYKRDKEDLEIQVEQLSLDYEILKQENHDISYKLEQSQVQ 529
Query: 296 YRRKLQEEDNS---NATQRGDSLAILRSELKSQKKH----VRNLKKKSLWSKILEEVMEK 348
+ K+Q E +S N + + + L ++LK Q K + +K+ K +EE +EK
Sbjct: 530 EQLKMQYECSSSLVNVNELENHVESLEAKLKKQYKECSESLYRIKELETQIKGMEEELEK 589
>At3g13640 RNase L inhibitor, putative
Length = 603
Score = 36.2 bits (82), Expect = 0.059
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 91 LSRALSHKSRSTRSRQAAVKVSEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNL---NLSS 147
L++ +H+ + + + + +LG GT G+GK+ + G NL N
Sbjct: 79 LAKDTTHRYGANGFKLHRLPIPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNTPP 138
Query: 148 GFTSGVA-TKGNKISILAFEVANTIVKGANLMQSLSQENIKHLKEVV----------LPS 196
+ + +G+++ V NL ++ +++ ++KEVV L
Sbjct: 139 DWEEILTHFRGSELQSYFIRVVE-----ENLKTAIKPQHVDYIKEVVRGNLGKMLEKLDE 193
Query: 197 EGVQNLISRDM--NELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLDRY-FEKLGS 253
G+ I DM N++L +RE ++ GE+ RF + D Y F++ S
Sbjct: 194 RGLMEEICADMELNQVL------EREARQVSGGELQRFAIAAVFVK--KADIYMFDEPSS 245
Query: 254 ELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALD 290
L +++LK A V++ L+ + Y + H+L LD
Sbjct: 246 YLDVRQRLK--AAQVIRSLLRHDSYVIVVEHDLSVLD 280
>At1g67230 unknown protein
Length = 1132
Score = 36.2 bits (82), Expect = 0.059
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 177 LMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADK--------REELKIFSGE 228
L++ +S EN L E+ + ++ + + +E LR+ K ++EL E
Sbjct: 454 LVEKVSGENQAQLSEINKEKDELR-VTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAE 512
Query: 229 VVRFGNRCKDPQWHNLDRYFEKLGSEL---TPQKQ-LKEEAEVVMQQLMTYVQYTAE-LY 283
++ + +W LD K+G+EL T QK+ L+ + ++L Q E +
Sbjct: 513 DLKAQRESFEKEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENME 572
Query: 284 HELHALDRFDQDY-------RRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKS 336
EL L+ + R L ++ S +Q + + + +L+S + + K++
Sbjct: 573 RELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERE 632
Query: 337 LWS--KILEEVMEKFVDVVNFL-------YLEIHEAFGSADPDKQVKDSQGNH 380
L + K+ EE EK + +N+L +++ + +K DS NH
Sbjct: 633 LQAKKKLFEEEREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNH 685
>At1g63300 hypothetical protein
Length = 1029
Score = 36.2 bits (82), Expect = 0.059
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 242 HNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHEL-HALDRFDQDYRRKL 300
H L++ L +E+ K+ K+E E+ M+QL + + H++ + L++ + K+
Sbjct: 465 HILEQKITDLYNEIEIYKRDKDELEIQMEQLALDYEILKQQNHDISYKLEQSQLQEQLKI 524
Query: 301 QEEDNS---NATQRGDSLAILRSELKSQKKH----VRNLKKKSLWSKILEEVMEKFVDV 352
Q E +S + T+ + + L +ELK Q + + +K+ + LEE MEK V
Sbjct: 525 QYECSSSLVDVTELENQVESLEAELKKQSEEFSESLCRIKELESQMETLEEEMEKQAQV 583
Score = 34.7 bits (78), Expect = 0.17
Identities = 42/170 (24%), Positives = 75/170 (43%), Gaps = 30/170 (17%)
Query: 175 ANLMQSLS--QENIKHLKE----VVLPSEGVQNL---ISRDMNELLRIAAADKREELKIF 225
ANL Q + +E I++LK+ ++L +E +NL + + ++ A+ +RE +K
Sbjct: 724 ANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLEKTKKSVMEAEASLQRENMKKI 783
Query: 226 SGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHE 285
E + + + E L +EL K K+E E + L T E
Sbjct: 784 ELE----------SKISLMRKESESLAAELQVIKLAKDEKETAISLLQT----------E 823
Query: 286 LHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKK 335
L + D + L E D + +A ++SELK +++ + NL+KK
Sbjct: 824 LETVRSQCDDLKHSLSENDLEMEKHK-KQVAHVKSELKKKEETMANLEKK 872
>At5g58360 similar to unknown protein (gb|AAB63094.1)
Length = 296
Score = 33.9 bits (76), Expect = 0.29
Identities = 34/128 (26%), Positives = 53/128 (40%), Gaps = 9/128 (7%)
Query: 521 HHLVSQVRVGNGGIRSPAKSPIRSPTQKTGQLFTHKGCSTSPMLTFEDQQMLRDVSKRKL 580
HHL S + + S K +R P ++ H S SP + ++ + KRK
Sbjct: 34 HHLSSPKHLSSADASSSRK--LRDPLRRLSSTAHHPQASNSPPKSSSFKRKI----KRKT 87
Query: 581 TPGISKSQEFSTAKTRLSKHHRLSKSSSHSPISESKNDMFSTRRVLPSVPVIDFDIDRMK 640
S + ST+ S +HR SSS + IS+S F R PS D +
Sbjct: 88 VYKPSSRLKLSTSS---SLNHRSKSSSSANAISDSAVGSFLDRVSSPSDQNFVHDPEPHS 144
Query: 641 ALDVIDRV 648
++D+ D +
Sbjct: 145 SIDIKDEL 152
>At5g62410 chromosomal protein - like
Length = 1175
Score = 33.1 bits (74), Expect = 0.50
Identities = 51/223 (22%), Positives = 94/223 (41%), Gaps = 16/223 (7%)
Query: 147 SGFTSGVATKGNKISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLIS-- 204
S S + + +IS L EV K + +Q + E++ LK + + IS
Sbjct: 832 SSLESHLTSLETQISTLTSEVDEQRAK-VDALQKIHDESLAELKLIHAKMKECDTQISGF 890
Query: 205 -RDMNELLRIAAADKREELKIFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKE 263
D + L+ +D + E K EVVR KD +D+ EK + + +KQL
Sbjct: 891 VTDQEKCLQ-KLSDMKLERKKLENEVVRMETDHKDCSV-KVDKLVEK-HTWIASEKQLFG 947
Query: 264 EAEVVMQQLMTYVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELK 323
+ Y + + Y L++ D + L++ N + + L
Sbjct: 948 KGGT------DYDFESCDPYVAREKLEKLQSD-QSGLEKRVNKKVMAMFEKAEDEYNALI 1000
Query: 324 SQKKHVRNLKKKSLWSKILEEVMEKFVDVVNFLYLEIHEAFGS 366
S+K + N K K +K++EE+ EK + + ++++++ FGS
Sbjct: 1001 SKKNTIENDKSKI--TKVIEELDEKKKETLKVTWVKVNQDFGS 1041
>At1g30135 unknown protein
Length = 131
Score = 32.7 bits (73), Expect = 0.65
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 398 QIDTLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEELTVQ 445
++ T S + S PPN + + PN K++++ LQSF K ++ +Q
Sbjct: 75 EMKTKSSSNGSDPPNKSTSFHHNQLPNPKASMKKSLQSFLQKRKIRIQ 122
>At4g11170 RPP1-WsA-like disease resistance protein
Length = 1174
Score = 32.3 bits (72), Expect = 0.85
Identities = 20/72 (27%), Positives = 39/72 (53%), Gaps = 7/72 (9%)
Query: 156 KGNKISILAFEVANTIVKGANLMQSLSQEN--IKHLKEVVLPSEGVQNLISRDMNELLRI 213
K K+ I+ +V N +++L++EN + +V+ ++ Q L+S D+N + ++
Sbjct: 287 KSQKVLIILDDVDNI-----EQLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQV 341
Query: 214 AAADKREELKIF 225
A K+E L IF
Sbjct: 342 AYPSKQEALTIF 353
>At5g54090 DNA mismatch repair protein MutS2-like
Length = 795
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/99 (20%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 250 KLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALDRFDQDYRRKLQEEDNSNAT 309
++ + ++ K+E + ++ + Y++ + EL+ L + D+ K + + T
Sbjct: 624 EINEVILDMERYKQEYQRLLNESRVYIRLSRELHENLLTAQKNINDHSTKERRKMRQELT 683
Query: 310 QRGDSLAILRSELKSQKKHVRNLKKKSLWSKILEEVMEK 348
Q G ++ RS L+ + R+ KS SK+ ++ K
Sbjct: 684 QAG---SMTRSTLRRTLQQFRSSAGKSSQSKVATQLQTK 719
>At4g20210 cadinene synthase like protein
Length = 598
Score = 32.0 bits (71), Expect = 1.1
Identities = 22/69 (31%), Positives = 38/69 (54%), Gaps = 4/69 (5%)
Query: 288 ALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKH----VRNLKKKSLWSKILE 343
AL R Q+ RK Q+ S T R DS+++ SE+ + +K + N+KK+ + S+ +E
Sbjct: 48 ALIRDPQESNRKFQKFPPSEWTNRFDSVSVDASEMDALRKEIDKIIPNVKKELMSSQGIE 107
Query: 344 EVMEKFVDV 352
+K + V
Sbjct: 108 STKKKILMV 116
>At1g17610 disease resistance protein, putative
Length = 836
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 13/141 (9%)
Query: 90 SLSRALSHKSRSTRSRQAAVKV------SEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNL 143
S SR L+ + R +Q A + S S G AG KA+ L L S
Sbjct: 151 SFSRNLAVMHGTHRIKQIADDIRLMFLSSASSDFKGLAGMDRHMKALYALLALESDEKVR 210
Query: 144 NLSSGFTSGVATKGNKISILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLI 203
+ +SGV K ++ + A VK + EN++++KE++LPSE +
Sbjct: 211 TIGIWGSSGVG----KTTLARYTYAEISVK---FQAHVFLENVENMKEMLLPSENFEGED 263
Query: 204 SRDMNELLRIAAADKREELKI 224
R +N + A K++ K+
Sbjct: 264 LRSVNHEMNEMAEAKQKHRKV 284
>At3g22790 unknown protein
Length = 1694
Score = 31.6 bits (70), Expect = 1.5
Identities = 68/302 (22%), Positives = 118/302 (38%), Gaps = 58/302 (19%)
Query: 88 IPSLSRALSH-----KSRSTRSRQAAVKVSEVSSLLGR------AGTAGLGKAVEVLDTL 136
I L + SH K + R+ +A +V + R AG A + +E++ L
Sbjct: 246 ITELEESFSHAQEDVKGLTNRATKAETEVENLKQAHSRLHSEKEAGLAEYNRCLEMISNL 305
Query: 137 GSSMTNLNLSS-GFTSGVATKGNKISILAFEVA--NTIVKGANLMQ-------------- 179
+ + ++ F++ A ++I L E+ N + G L
Sbjct: 306 EKKVRDAEENAQNFSNQSAKAEDEIKALRHELVKVNEVKDGLRLRYQQCLETISKLEREV 365
Query: 180 SLSQENIKHLKEVVLPSEGV------QNLISRDMNELLRIAA-------ADKREELKIFS 226
S +Q+N K L VL Q + NE L++ A A K +E+
Sbjct: 366 SHAQDNAKRLSSEVLAGAAKLKTVEDQCTLLESSNETLKLEADGLTHKLAAKDQEIFQKQ 425
Query: 227 GEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQK---QLKEEAEVVMQQLMTYVQYTAELY 283
E+ +F + +D RY E S T Q Q +EE +V+ +L + + +L
Sbjct: 426 NELEKFQSLIEDEH----SRYLEIEVSLKTLQSLYSQSQEEQKVITSELQSRIGMLRDLE 481
Query: 284 HELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKKKSLWSKILE 343
L+ + E+N N ++ DS I L++QK + +LK+ + K+ E
Sbjct: 482 TRNLKLEGDISSVK-----EENQNLSELNDSSMIF---LETQKCEISSLKE--IKEKLEE 531
Query: 344 EV 345
EV
Sbjct: 532 EV 533
>At1g24160 unknown protein
Length = 540
Score = 31.6 bits (70), Expect = 1.5
Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 527 VRVGNGGIR-SPAKSPIRSPTQKTGQLFTHKGCSTSPMLTFEDQQMLRDVSKRKLTPGIS 585
++ +G +R +P + ++ P Q G+ T+K ++ ++ + + +K+ P
Sbjct: 264 IKKNDGNVRINPTRGSLK-PNQVGGKPETNKTVTSRKTPPSKEMKNMMKATKKPAAPMSK 322
Query: 586 KSQEFSTAKTRLSKHHRLSKSSSHSPISESK-NDMFSTRRVLPSVPVIDFDID 637
Q F+T + + S S+SHS + + K + + S ++ P I ++D
Sbjct: 323 SPQGFATPRVYKPAPTKTSLSTSHSSLKKEKVSPLLSKKQTAPKSLHISMNLD 375
>Atmg00290 -mitochondrial genome- ribosomal protein S4 (RPS4)
Length = 362
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 223 KIFSGEVVRFGNRCKDPQWHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAEL 282
K+ G+++ F + + R F K E++ +K + +++ Q L + + E
Sbjct: 145 KLSHGDIISFQENNAIIRGEEIRRSFYK---EISVEKII---GKLLHQPLRMWRRSKTEW 198
Query: 283 YHELHAL--------DRFDQDYRRKLQEEDNSNATQRGDSLAILRSELKSQKKHVRNLKK 334
+H L RF Q R +QEED + G L S K+ RNL K
Sbjct: 199 FHLLKTKRGCRLLLKSRFLQQLRSSMQEEDLERTKKFGSEKVCLGSSFAEHKRMKRNLLK 258
Query: 335 KSLWSK 340
SK
Sbjct: 259 SLFLSK 264
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.313 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,152,781
Number of Sequences: 26719
Number of extensions: 600175
Number of successful extensions: 1720
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1669
Number of HSP's gapped (non-prelim): 62
length of query: 654
length of database: 11,318,596
effective HSP length: 106
effective length of query: 548
effective length of database: 8,486,382
effective search space: 4650537336
effective search space used: 4650537336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0344.19