BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.3
(230 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28500 predicted protein 330 5e-91
At1g28470 unknown protein 306 5e-84
At4g29230 putative protein 285 1e-77
At5g56620 putative protein 260 4e-70
At1g25580 unknown protein 209 1e-54
At5g14490 putative protein 171 2e-43
At3g01600 hypothetical protein 166 7e-42
At3g04060 NAM-like protein (no apical meristem) 86 2e-17
At5g18270 NAM (no apical meristem)-like protein 81 4e-16
At5g53950 CUC2 (dbj|BAA19529.1) 75 2e-14
At5g07680 NAM (no apical meristem)-like protein 72 2e-13
At3g18400 organ separation protein, putative 72 3e-13
At5g61430 NAM, no apical meristem, - like protein 70 7e-13
At3g29035 NAM-like protein (No Apical Meristem) 69 2e-12
At5g39610 NAM / CUC2 - like protein 69 2e-12
At2g24430 NAM (no apical meristem)-like protein 69 2e-12
At1g76420 unknown protein 68 5e-12
At1g02240 hypothetical protein 67 6e-12
At5g13180 NAM-like protein 65 4e-11
At1g79580 unknown protein 64 7e-11
>At4g28500 predicted protein
Length = 305
Score = 330 bits (845), Expect = 5e-91
Identities = 160/231 (69%), Positives = 183/231 (78%), Gaps = 7/231 (3%)
Query: 1 MKWCND-SDKEKGNKYLITPTNTPKAIINLTEGIHTIKCPSCSHNTDVRDQGGIH---GL 56
M WCND SD + + + +P + +L H CPSC HN +Q GIH GL
Sbjct: 1 MTWCNDRSDVQTVERIIPSPGAAESPVASLPVSCHKT-CPSCGHNFKFHEQAGIHDLPGL 59
Query: 57 PAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDG 116
PAGVKFDP DQE+LEHLE KV D KLHPLID+FI T+ G+NGICYTHPEKLPGV+KDG
Sbjct: 60 PAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPGVNKDG 119
Query: 117 QVRHFFHRPSKAYTTGTRKRRKVHTD-DEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVL 175
VRHFFHRPSKAYTTGTRKRRKVHTD D G ETRWHKTGKTR V A GG V+G+KKI+VL
Sbjct: 120 TVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLA-GGRVRGYKKILVL 178
Query: 176 YTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSI 226
YTN+G+Q+KPEKTNWVMHQYHLG++EEE++GELVVSKVFYQTQPRQCG S+
Sbjct: 179 YTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGGSV 229
>At1g28470 unknown protein
Length = 314
Score = 306 bits (785), Expect = 5e-84
Identities = 153/211 (72%), Positives = 172/211 (81%), Gaps = 9/211 (4%)
Query: 20 TNTPKAIINLTEGIHTIKCPSCSHNTDVR--DQGG----IHGLPAGVKFDPNDQEILEHL 73
T+ P + I+ I T CPSC H DQ G + LPAGVKFDP+D+EIL HL
Sbjct: 37 TSRPDSKISAETPITT--CPSCGHKLHHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHL 94
Query: 74 EAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT 133
EAKV SD KLHPLID+FIPTL+G+NGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT
Sbjct: 95 EAKVSSDKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGT 154
Query: 134 RKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMH 193
RKRRKV TD+EG ETRWHKTGKTR V + G GFKKI+VLYTN+GRQ+KPEKTNWVMH
Sbjct: 155 RKRRKVSTDEEGHETRWHKTGKTRPVLSQSGET-GFKKILVLYTNYGRQKKPEKTNWVMH 213
Query: 194 QYHLGSNEEEQDGELVVSKVFYQTQPRQCGT 224
QYHLGS+E+E+DGE V+SKVFYQTQPRQCG+
Sbjct: 214 QYHLGSSEDEKDGEPVLSKVFYQTQPRQCGS 244
>At4g29230 putative protein
Length = 498
Score = 285 bits (730), Expect = 1e-77
Identities = 135/197 (68%), Positives = 158/197 (79%), Gaps = 10/197 (5%)
Query: 37 KCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQ 96
KCPSC H + + Q + GLPAGVKFDP DQE++EHLEAKV++ K HPLID+FIPT++
Sbjct: 30 KCPSCGHKLEGKPQDWV-GLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFIPTIE 88
Query: 97 GDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTD--------DEGSET 148
G++GICYTHPEKLPGV++DG RHFFHRPSKAYTTGTRKRRK+ T+ ET
Sbjct: 89 GEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSSGET 148
Query: 149 RWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGEL 208
RWHKTGKTR V G KG KKI+VLYTNFG+ RKPEKTNWVMHQYHLG++EEE++GEL
Sbjct: 149 RWHKTGKTRPVMV-NGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEGEL 207
Query: 209 VVSKVFYQTQPRQCGTS 225
VVSK+FYQTQPRQC S
Sbjct: 208 VVSKIFYQTQPRQCNWS 224
>At5g56620 putative protein
Length = 386
Score = 260 bits (665), Expect = 4e-70
Identities = 125/196 (63%), Positives = 146/196 (73%), Gaps = 12/196 (6%)
Query: 38 CPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDV-----CKLHPLIDQFI 92
CP C + GLPAGVKFDP DQE++EHLEAKV HPLID+FI
Sbjct: 25 CPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFI 84
Query: 93 PTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDE------GS 146
PT+ G++GICYTHP+KLPGV++DG +HFFH+PS+AYTTGTRKRRK+ D S
Sbjct: 85 PTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSELTGSS 144
Query: 147 ETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDG 206
ETRWHKTGKTR V G +G KKI+VLYTNFG+ R+PEKTNWVMHQYHLG NEEE++G
Sbjct: 145 ETRWHKTGKTRPVMINGQQ-RGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREG 203
Query: 207 ELVVSKVFYQTQPRQC 222
ELVVSK+FYQTQPRQC
Sbjct: 204 ELVVSKIFYQTQPRQC 219
>At1g25580 unknown protein
Length = 449
Score = 209 bits (531), Expect = 1e-54
Identities = 109/187 (58%), Positives = 129/187 (68%), Gaps = 13/187 (6%)
Query: 38 CPSCSH---NTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
CP C H N+DV D GLP GVKFDP+D EI+ HL AK HP ID+FIPT
Sbjct: 39 CPKCQHVIDNSDVVDDWP--GLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPT 96
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTG 154
+ D+GICYTHP+ LPGV DG V HFFH+ KAY+TGTRKRRK+H DD G + RWHKTG
Sbjct: 97 VNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFG-DVRWHKTG 155
Query: 155 KTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVF 214
+T+ V G +G KKIMVLY K KTNWVMHQYHLG E+E++G+ VVSK+F
Sbjct: 156 RTKPVVL-DGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKIF 209
Query: 215 YQTQPRQ 221
YQ QP+Q
Sbjct: 210 YQ-QPQQ 215
>At5g14490 putative protein
Length = 350
Score = 171 bits (434), Expect = 2e-43
Identities = 97/188 (51%), Positives = 123/188 (64%), Gaps = 5/188 (2%)
Query: 36 IKCPSCSHNTDVRDQ-GGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPT 94
I C +CS+ D + GLP GVKF+P D+E++EHLEAK D K H LI FI +
Sbjct: 37 INCFNCSYRIDNSNVLTPWPGLPKGVKFEPTDEEVIEHLEAKCGIDGLKPHLLIQDFICS 96
Query: 95 LQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKV-HTDDEGSETRWHKT 153
+ D GI YTHP+ LPGVSKDG FF++ + AY G RKRR++ T + RWHKT
Sbjct: 97 VTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAYQNGQRKRRRITPTSLKDDTVRWHKT 156
Query: 154 GKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKV 213
G+T+ V G KG KKIMVLY + + KPEK+NWV+HQYHLG+ EE + GE VVSK+
Sbjct: 157 GQTKPVML-NGIQKGCKKIMVLYKSARKGFKPEKSNWVLHQYHLGT-EEGEIGEYVVSKI 214
Query: 214 FYQTQPRQ 221
YQ QP+Q
Sbjct: 215 TYQ-QPKQ 221
>At3g01600 hypothetical protein
Length = 370
Score = 166 bits (421), Expect = 7e-42
Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 5/189 (2%)
Query: 32 GIHTIKCPSCSHNTDVRDQG-GIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQ 90
G H IKCP+C++ D + GLP GVKF+P D++I+E LEAK + H LI++
Sbjct: 31 GAH-IKCPNCTYRIDNSNVLIPWPGLPKGVKFEPTDEDIIEFLEAKCGIGGSEPHVLIEE 89
Query: 91 FIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSE-TR 149
FI + D GI YTHP+ LPG +KDG FFH+ +AY TG RKRRK+ E R
Sbjct: 90 FIRPVTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKITPTLVNDEPVR 149
Query: 150 WHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELV 209
WHKTG+T+ V G +G KKIMVLY + + KPEK+NWV+HQYHLG+ E ++ G+ V
Sbjct: 150 WHKTGRTKPVML-SGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLGT-EGKEIGDYV 207
Query: 210 VSKVFYQTQ 218
VSK+ YQ Q
Sbjct: 208 VSKITYQQQ 216
>At3g04060 NAM-like protein (no apical meristem)
Length = 338
Score = 85.5 bits (210), Expect = 2e-17
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 47 VRDQGG---IHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICY 103
V +QGG + LP G +F P D+EI+ H + V ++ +F G +
Sbjct: 8 VVNQGGDQEVVDLPPGFRFHPTDEEIITHYLKEKVFNI--------RFTAAAIGQADLNK 59
Query: 104 THPEKLPGVSKDGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAG 162
P LP ++K G+ +FF + + Y TG R R + W TGK + +F G
Sbjct: 60 NEPWDLPKIAKMGEKEFYFFCQRDRKYPTGMRTNRATVSG------YWKATGKDKEIFRG 113
Query: 163 GGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQD------GELVVSKVFYQ 216
G + G KK +V YT GR K EKTNWVMH+Y L + E VV +VF++
Sbjct: 114 KGCLVGMKKTLVFYT--GRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARDEWVVCRVFHK 171
Query: 217 TQP 219
P
Sbjct: 172 NAP 174
>At5g18270 NAM (no apical meristem)-like protein
Length = 335
Score = 81.3 bits (199), Expect = 4e-16
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 56 LPAGVKFDPNDQEILE-HLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
LP G +F P D+EI+ +L+ KV++ +F G+ + P LP +K
Sbjct: 21 LPPGFRFHPTDEEIITCYLKEKVLNS---------RFTAVAMGEADLNKCEPWDLPKRAK 71
Query: 115 DGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIM 173
G+ +FF + + Y TG R R + W TGK + +F G G + G KK +
Sbjct: 72 MGEKEFYFFCQRDRKYPTGMRTNRATESG------YWKATGKDKEIFKGKGCLVGMKKTL 125
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFYQTQPRQCGTSII 227
V Y GR K EKTNWVMH+Y L + E VV +VF++ P +
Sbjct: 126 VFYR--GRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMT 183
Query: 228 RDP 230
R P
Sbjct: 184 RIP 186
>At5g53950 CUC2 (dbj|BAA19529.1)
Length = 375
Score = 75.5 bits (184), Expect = 2e-14
Identities = 60/178 (33%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 49 DQGG-IHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPE 107
D GG LP G +F P D+E++ H + V D C I + D C P
Sbjct: 9 DHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEV------DLNKC--EPW 60
Query: 108 KLPGVSKDGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGG-A 165
+LPG +K G+ +FF + Y TG R R W TGK R +F+ A
Sbjct: 61 QLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAG------YWKATGKDREIFSSKTCA 114
Query: 166 VKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFYQT 217
+ G KK +V Y GR K EK+NWVMH+Y L E V+S+VF +T
Sbjct: 115 LVGMKKTLVFYK--GRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170
>At5g07680 NAM (no apical meristem)-like protein
Length = 329
Score = 72.4 bits (176), Expect = 2e-13
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H K V D+ F G+ + P +LP +K
Sbjct: 17 LPPGFRFHPTDEELITHYLHKKVLDL--------GFSAKAIGEVDLNKAEPWELPYKAKI 68
Query: 116 GQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +FF + Y TG R R W TGK + +F G V G KK +V
Sbjct: 69 GEKEWYFFCVRDRKYPTGLRTNRATQAG------YWKATGKDKEIFRGKSLV-GMKKTLV 121
Query: 175 LYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFYQT 217
Y GR K +KTNWVMH+Y L + E V+ +VF++T
Sbjct: 122 FYR--GRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKT 168
>At3g18400 organ separation protein, putative
Length = 314
Score = 71.6 bits (174), Expect = 3e-13
Identities = 53/163 (32%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H + VSD+ F D + P LP +
Sbjct: 5 LPPGFRFHPTDEELITHYLCRKVSDI--------GFTGKAVVDVDLNKCEPWDLPAKASM 56
Query: 116 GQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +FF + + Y TG R R W TGK + ++ G V G KK +V
Sbjct: 57 GEKEWYFFSQRDRKYPTGLRTNRATEAG------YWKTTGKDKEIYRSGVLV-GMKKTLV 109
Query: 175 LYTNFGRQRKPEKTNWVMHQYHLGSNE---EEQDGELVVSKVF 214
Y GR K EK+NWVMH+Y L S + E VV +VF
Sbjct: 110 FYK--GRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVF 150
>At5g61430 NAM, no apical meristem, - like protein
Length = 336
Score = 70.5 bits (171), Expect = 7e-13
Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H K V D F G+ + + P +LP ++K
Sbjct: 16 LPPGFRFHPTDEELITHYLHKKVLDT--------SFSAKAIGEVDLNKSEPWELPWMAKM 67
Query: 116 GQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +FF + Y TG R R W TGK + ++ G V G KK +V
Sbjct: 68 GEKEWYFFCVRDRKYPTGLRTNRATEAG------YWKATGKDKEIYRGKSLV-GMKKTLV 120
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL 197
Y GR K +KTNWVMH+Y L
Sbjct: 121 FYR--GRAPKGQKTNWVMHEYRL 141
>At3g29035 NAM-like protein (No Apical Meristem)
Length = 318
Score = 69.3 bits (168), Expect = 2e-12
Identities = 55/168 (32%), Positives = 74/168 (43%), Gaps = 26/168 (15%)
Query: 56 LPAGVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
LP G +F P D+E++ H L KVV+ F G+ + P LP +K
Sbjct: 24 LPPGFRFHPTDEELITHYLRPKVVNSF---------FSAIAIGEVDLNKVEPWDLPWKAK 74
Query: 115 DGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIM 173
G+ +FF + Y TG R R W TGK + +F G V G KK +
Sbjct: 75 LGEKEWYFFCVRDRKYPTGLRTNRATKAG------YWKATGKDKEIFKGKSLV-GMKKTL 127
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFY 215
V Y GR K KTNWVMH+Y L + E V+S+VF+
Sbjct: 128 VFYK--GRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFH 173
>At5g39610 NAM / CUC2 - like protein
Length = 285
Score = 68.9 bits (167), Expect = 2e-12
Identities = 58/179 (32%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 56 LPAGVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
LP G +F P D+E++ H L+ KV + F T G+ + P LP +K
Sbjct: 20 LPPGFRFHPTDEELITHYLKPKVFNTF---------FSATAIGEVDLNKIEPWDLPWKAK 70
Query: 115 DGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIM 173
G+ +FF + Y TG R R W TGK + +F G V G KK +
Sbjct: 71 MGEKEWYFFCVRDRKYPTGLRTNRATEAG------YWKATGKDKEIFKGKSLV-GMKKTL 123
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFYQTQPRQCGTSI 226
V Y GR K KTNWVMH+Y L + E V+ +VF Q R GT +
Sbjct: 124 VFYK--GRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVF---QKRADGTKV 177
>At2g24430 NAM (no apical meristem)-like protein
Length = 316
Score = 68.9 bits (167), Expect = 2e-12
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK- 114
LP G +F P D+E++ + ++D F D + + P +LP +K
Sbjct: 16 LPPGFRFHPTDEELISYYLVNKIAD--------QNFTGKAIADVDLNKSEPWELPEKAKM 67
Query: 115 DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVF-AGGGAVKGFKKIM 173
G+ +FF + Y TG R R +T W TGK + +F + + G KK +
Sbjct: 68 GGKEWYFFSLRDRKYPTGVRTNRATNTG------YWKTTGKDKEIFNSTTSELVGMKKTL 121
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHLGSNEE---EQDGELVVSKVFYQTQ 218
V Y GR + EKT WVMH+Y L S + E VV +VF +T+
Sbjct: 122 VFYR--GRAPRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTE 167
>At1g76420 unknown protein
Length = 334
Score = 67.8 bits (164), Expect = 5e-12
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 55 GLPAGVKFDPNDQEILE-HLEAKVV-SDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGV 112
GLP G +F P D+E++ +L +K+ + +H + D C P +LP +
Sbjct: 21 GLPPGFRFHPTDEELITFYLASKIFHGGLSGIH--------ISEVDLNRC--EPWELPEM 70
Query: 113 SKDGQVRHFFHR-PSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGA-VKGFK 170
+K G+ +F+ + Y TG R R + W TGK + VF+GGG + G K
Sbjct: 71 AKMGEREWYFYSLRDRKYPTGLRTNRAT------TAGYWKATGKDKEVFSGGGGQLVGMK 124
Query: 171 KIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQ---DGELVVSKVFYQTQPRQ 221
K +V Y GR + KT WVMH+Y L ++ + E V+ +VF +T R+
Sbjct: 125 KTLVFYK--GRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRK 176
>At1g02240 hypothetical protein
Length = 359
Score = 67.4 bits (163), Expect = 6e-12
Identities = 55/175 (31%), Positives = 81/175 (45%), Gaps = 24/175 (13%)
Query: 57 PAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVS--- 113
P G +F PND+EI++H D H +D+ I T+ IC P LP S
Sbjct: 4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIK 57
Query: 114 -KDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVK--GFK 170
+DG V +FF Y G ++RR+ ++ W KTGKT V G + G K
Sbjct: 58 SRDG-VWYFFSVKEMKYNRGDQQRRRTNSGF------WKKTGKTMTVMRKRGNREKIGEK 110
Query: 171 KIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTS 225
+++V + R KT+WVMH+YH S Q V KV ++ + + +S
Sbjct: 111 RVLVF-----KNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSS 160
>At5g13180 NAM-like protein
Length = 252
Score = 64.7 bits (156), Expect = 4e-11
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 21/159 (13%)
Query: 50 QGGIHGLPAGVKFDPNDQE-ILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEK 108
+ G+ LP G +F P D+E ++++L+ KV S PL IP +C P
Sbjct: 8 KNGVLRLPPGFRFHPTDEELVVQYLKRKVCSS-----PLPASIIPEFD----VCRADPWD 58
Query: 109 LPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTG-KTRAVFAGGGAVK 167
LPG + + R+FF Y G R R + W TG R V + G +
Sbjct: 59 LPGNLE--KERYFFSTREAKYPNGNRSNRATGSG------YWKATGIDKRVVTSRGNQIV 110
Query: 168 GFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDG 206
G KK +V Y G+ +T+W+MH+Y L S+ G
Sbjct: 111 GLKKTLVFYK--GKPPHGSRTDWIMHEYRLSSSPPSSMG 147
>At1g79580 unknown protein
Length = 371
Score = 63.9 bits (154), Expect = 7e-11
Identities = 49/165 (29%), Positives = 73/165 (43%), Gaps = 13/165 (7%)
Query: 51 GGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLP 110
GG +P G +F P ++E+L + K VS P+ I + + + EK
Sbjct: 12 GGQLSVPPGFRFHPTEEELLYYYLKKKVS----YEPIDLDVIREVDLNKLEPWELKEKCR 67
Query: 111 GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFK 170
S +FF K Y TGTR R + W TG+ +++ G +
Sbjct: 68 IGSGPQNEWYFFSHKDKKYPTGTRTNRAT------AAGFWKATGRDKSIHLNSSKKIGLR 121
Query: 171 KIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEE-QDGELVVSKVF 214
K +V YT GR +KT W+MH+Y L +E E Q+ VV +VF
Sbjct: 122 KTLVFYT--GRAPHGQKTEWIMHEYRLDDSENEIQEDGWVVCRVF 164
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.317 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,101,341
Number of Sequences: 26719
Number of extensions: 279460
Number of successful extensions: 762
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 590
Number of HSP's gapped (non-prelim): 113
length of query: 230
length of database: 11,318,596
effective HSP length: 96
effective length of query: 134
effective length of database: 8,753,572
effective search space: 1172978648
effective search space used: 1172978648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0336.3