BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0316.6
(1449 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15510 putative non-LTR retroelement reverse transcriptase 368 e-101
At1g47910 reverse transcriptase, putative 341 2e-93
At2g17610 putative non-LTR retroelement reverse transcriptase 339 8e-93
At2g17910 putative non-LTR retroelement reverse transcriptase 328 1e-89
At2g45230 putative non-LTR retroelement reverse transcriptase 324 2e-88
At3g45550 putative protein 312 8e-85
At2g31520 putative non-LTR retroelement reverse transcriptase 306 6e-83
At2g25550 putative non-LTR retroelement reverse transcriptase 304 2e-82
At2g16680 putative non-LTR retroelement reverse transcriptase 294 2e-79
At2g01840 putative non-LTR retroelement reverse transcriptase 286 5e-77
At2g41580 putative non-LTR retroelement reverse transcriptase 284 3e-76
At2g05200 putative non-LTR retroelement reverse transcriptase 272 1e-72
At4g09710 RNA-directed DNA polymerase -like protein 271 3e-72
At1g24640 hypothetical protein 271 3e-72
At3g31420 hypothetical protein 270 3e-72
At4g10830 putative protein 236 7e-62
At2g31080 putative non-LTR retroelement reverse transcriptase 216 1e-55
At4g29090 putative protein 215 1e-55
At2g11240 pseudogene 211 2e-54
At3g32110 non-LTR reverse transcriptase, putative 193 5e-49
>At2g15510 putative non-LTR retroelement reverse transcriptase
Length = 1138
Score = 368 bits (945), Expect = e-101
Identities = 296/1081 (27%), Positives = 458/1081 (41%), Gaps = 148/1081 (13%)
Query: 418 METKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSASLNHIAF 477
METK ++ V+ + G V+ V G +GGL L W V +D+ A N I F
Sbjct: 1 METKNCSNVVVDLQEWLGYDRVYTVNPVGL----SGGLALFWKKGVNIDVRYADKNLIDF 56
Query: 478 SLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKL 537
+ + + VYG P NK W+ + + R PW GDFN IL +K
Sbjct: 57 QIQFGSYD--FFVSCVYGDPAFSNKHLVWEKISKI-GLNRKEPWCMLGDFNVILHNGEKR 113
Query: 538 GGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDAL 597
GG + CD+ ++ G F+W KR ++ RLD N W
Sbjct: 114 GGPRRGDSSFISFKDMLECCDMLELPSKGNPFSWGGKRNSLW-IQCRLDRCFGNKNWFRH 172
Query: 598 WPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGE 657
+PV+ L + SD P+L+ R + + + FRF++ + KE + +AW
Sbjct: 173 FPVSNQEFLDKRGSDRRPVLV----RLSKTKEEYKGNFRFDKRLFNQPLVKEAIQQAWNG 228
Query: 658 GSAMG---LTAKLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKE 714
+G + +L S+L W +E + IS +A L+ Q V T +
Sbjct: 229 NQRVGGMQVLERLKKCRSALSRWKQENNSNSLTCISQARAALELEQSSGFPRSKVVFTLK 288
Query: 715 AEIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFV 774
++ +E +WSQ+SRA W+ GDKNT+FFH R
Sbjct: 289 NDLCKAN--QDEETFWSQKSRAKWMHGGDKNTSFFHASVKDNR----------------- 329
Query: 775 DDPNIGRVLGDYFTSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQM 834
D+ + G + YF LF SS S D RVT VL+ +K +V +A+F +
Sbjct: 330 DEVSKGAIAESYFKDLFKSSEGSNFADLFAGFQPRVTEVMNRVLTATVSKNEVRDAVFAI 389
Query: 835 HPTKAPGLDGFPALFYQ----RHWDIIGDDVAHFCLQVLNGTASPGS------------- 877
+ APG DGF + + G + L+ L +S +
Sbjct: 390 RSSSAPGADGFTGQSLDSKSLKRFKSSGQSLDSKSLKRLQMVSSFRTFVAERLISDNILI 449
Query: 878 ----LHGIK---------VAQKAPV-----------ISHLLFA---DDNILFARATINEA 910
+HG++ +A K+ + + LL A ++ +A E
Sbjct: 450 AHEVVHGLRTHKTISKDFIAIKSDMSKAFDRVEWNYVKALLVALGFHSSLFMCKAEKEEV 509
Query: 911 ACISDILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTI 970
+ + +I Y A+GQ IN +KS ++ +LD
Sbjct: 510 SVLKNIFKVYGDATGQRINYEKSSITFGALILD--------------------------- 542
Query: 971 IGKSKSQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCA 1030
++KD++ +L GW + LS G+E+L+K+VA A+ Y MSCF L + C
Sbjct: 543 ----------YIKDKLKSRLSGWFARTLSLGGKEILLKAVAMAMQVYAMSCFKLTKTTCK 592
Query: 1031 ELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQ 1090
L ++ F+W +R HWV W LC K GGLGFRD ++FN +L+ K WRI
Sbjct: 593 NLTSAMSDFWWNALEHKRKTHWVSWEKLCLAKESGGLGFRDIESFNQALLAKQSWRILQY 652
Query: 1091 PDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWR 1150
P L A+ FK+ YF + +A G RPSYA SIL + + KG R +G+GK + VW
Sbjct: 653 PSFLFARFFKSRYFDDEEFLEADLGVRPSYACCSILFGRELLAKGLRKEVGNGKSLNVWM 712
Query: 1151 DNWLPGGAPLLFREDLVAEWGIHL---VSDLIVQPHGGWNVPLLEMVFAPATVQRILAVP 1207
D W+ AP R L + ++L V+DLI W LLE +F P V+ ++
Sbjct: 713 DPWIFDIAP---RLPLQRHFSVNLDLKVNDLINFEDRCWKRDLLEELFYPTDVE-LITKR 768
Query: 1208 VPLFRGDDCLFWPWTVNGMYSSKSGYQL------LQSLTQEGVSSSSSGGNLHPSLWKKF 1261
P+ DD W G YS KSGY L L + Q + S++G L ++
Sbjct: 769 NPVVNMDDFWVWLHAKTGEYSVKSGYWLAFQSNKLDLIQQANLLPSTNG------LKEQV 822
Query: 1262 WRSEALPRCKELAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQP 1321
W +++ P+ K WR + LPV + RGM +D RC +CG E E+ +HV C +
Sbjct: 823 WSTKSSPKIKMFLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQ 882
Query: 1322 LWFASPLAIRVASFSSLHELA-VAFLSTAEEDFIP---VFQAW---LYTLWEARNALIFN 1374
+W S + F + A + FL ++ + V ++W L+ LW+ RN L F+
Sbjct: 883 VWALSGVPTPEFGFQNASIFANIQFLFELKKMILVPDLVKRSWPWVLWRLWKNRNKLFFD 942
Query: 1375 -------NKPVSMESLLQRLSTLLEMPTLVYAPVGRAQRDMASSWSRPQRGTTKVNVDAS 1427
N V ++ + + G+ SW P G K N+ ++
Sbjct: 943 GITFCPLNSIVKIQEDTLEWFQAQSQIRVSESEEGQRVIPFTHSWEPPPEGWVKCNIGSA 1002
Query: 1428 F 1428
+
Sbjct: 1003 W 1003
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 341 bits (874), Expect = 2e-93
Identities = 186/509 (36%), Positives = 282/509 (54%), Gaps = 26/509 (5%)
Query: 880 GIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSMLSVSR 939
GIKVA +P +SHLLFADD++ F +A + I +IL YE SGQ IN KS +
Sbjct: 450 GIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGH 509
Query: 940 NVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDRVWKKLKGWKEKFLS 999
V D+ ++K +LG+ + YLGLP +G SK+++F+FV+DR+ ++ GW KFLS
Sbjct: 510 KVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLS 569
Query: 1000 RAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWSTLC 1059
+ G+EV+IKSVA +P YVMSCF LP ++ ++L +AKF+W+ + RG+HW+ W LC
Sbjct: 570 KGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLC 629
Query: 1060 RHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPS 1119
K DGGLGFR+ FN +L+ K WR+ + PD+L A++FK YF +++ D+ K Y PS
Sbjct: 630 SSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPS 689
Query: 1120 YAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGAPLLFREDLVAEWGIHL----- 1174
Y W S++ ++ + KG R+G G + VW D W+P P A++G +
Sbjct: 690 YGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFP------RPAKYGGSIVDPSL 743
Query: 1175 -VSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPWTVNGMYSSKSGY 1233
V LI WN+ LL+ +F P V I A+P+ +D L W +T G Y+ KSGY
Sbjct: 744 KVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGY 803
Query: 1234 QLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGM 1293
+ EG ++ G +L +L W+ + P+ + W+ + G +PV +LR RG+
Sbjct: 804 HTARLDLNEG--TTLIGPDL-TTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGI 860
Query: 1294 DVDDRCPLCGCEEETNDHVFVCCPAVQPLWFAS--PLAIRV----ASFSSLHELAVAFLS 1347
D C CG EE+ +H C + +W S P A + + F++L L S
Sbjct: 861 LCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHLFWRIPS 920
Query: 1348 TAEEDFIPVFQAW-LYTLWEARNALIFNN 1375
+ P W ++ +W+ARN +F N
Sbjct: 921 GVDSAPYP----WIIWYIWKARNEKVFEN 945
Score = 133 bits (334), Expect = 9e-31
Identities = 77/254 (30%), Positives = 127/254 (49%), Gaps = 9/254 (3%)
Query: 611 SDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEGSAMG---LTAKL 667
SDH+P++ + R + FRF++ W+ ++ E +++ W S KL
Sbjct: 4 SDHSPVIATIADKIPRGKQN----FRFDKRWIGKDGLLEAISQGWNLDSGFREGQFVEKL 59
Query: 668 SSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQE 727
++ ++ W + + I D KA L Q ++ E E + L +E
Sbjct: 60 TNCRRAISKWRKSLIPFGRQTIEDLKAELDVAQ--RDDDRSREEITELTLRLKEAYRDEE 117
Query: 728 IWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYF 787
+W Q+SR+ W++ GD N+ FFH QRR RN I + D+ G ++D +I + YF
Sbjct: 118 QYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYF 177
Query: 788 TSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPA 847
+LFT+++P +A V +T ++L+ T+ +V ALF +HP KAPG DG A
Sbjct: 178 QNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTA 237
Query: 848 LFYQRHWDIIGDDV 861
LF+Q+ W II D+
Sbjct: 238 LFFQKSWAIIKSDL 251
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 339 bits (869), Expect = 8e-93
Identities = 185/516 (35%), Positives = 285/516 (54%), Gaps = 10/516 (1%)
Query: 878 LHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSMLSV 937
LHG K ++ P ISHLLFA D+++F +AT+ E + ++L YEKASGQ +N KS +
Sbjct: 119 LHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILF 178
Query: 938 SRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDRVWKKLKGWKEKF 997
+ + + +L QLLG+ E F +YLGLP +G++K+ F+F+ + +K+ W K
Sbjct: 179 GKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKL 238
Query: 998 LSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWST 1057
LS AG+EVLIKS+ AIP+Y MSCF+LP L ++ + F+W+ + I WV WS
Sbjct: 239 LSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSK 298
Query: 1058 LCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYR 1117
L K GGL RD K FN++L+ K WRI QP +L+A++FKA YFP+ L DAK +
Sbjct: 299 LNDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQ 358
Query: 1118 PSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGAPLLFREDLVAEWGIHLVSD 1177
SYAW SIL + +G ++ G+G +Q+W+DNWLP P + + VSD
Sbjct: 359 SSYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSD 418
Query: 1178 LIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPWTVNGMYSSKSGYQLLQ 1237
L+++ G WN LL + + I A+ + +D + W +T +G YS KSGY LL+
Sbjct: 419 LLIE--GRWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLR 476
Query: 1238 SLTQEGVSSSSSGGNLH-PSLWKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGMDVD 1296
L+Q+ +S S + +++ W+ A P+ K WR+ LP +L+ R + D
Sbjct: 477 KLSQQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITD 536
Query: 1297 DRCPLCGCEEETNDHVFVCCPAVQPLWFASPL------AIRVASFSSLHELAVAFLSTAE 1350
D C CG E +H+ C + +W + + ++ SF+ E +A
Sbjct: 537 DTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSAR 596
Query: 1351 EDFIPVFQAWLYTLWEARNALIFNNKPVSMESLLQR 1386
+D + +F + +W+ RN LIFNNK S+ +Q+
Sbjct: 597 KD-VSLFPFIGWRIWKMRNDLIFNNKRWSIPDSIQK 631
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 328 bits (842), Expect = 1e-89
Identities = 184/520 (35%), Positives = 279/520 (53%), Gaps = 13/520 (2%)
Query: 866 LQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASG 925
+ +LN G + GI+ K ++HLLFADD +L +AT E + LS Y + SG
Sbjct: 630 IHILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSG 689
Query: 926 QVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDR 985
Q+INL+KS ++ +NV + +K G+ KYLGLP + SK +F F+K++
Sbjct: 690 QMINLNKSAITFGKNVDIQIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEK 749
Query: 986 VWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDA 1045
+ +L GW K LS+ G+EVL+KS+A A+P YVMSCF LP +LC +L ++ F+W
Sbjct: 750 LQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQ 809
Query: 1046 SRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFP 1105
+R IHW+ W L K GG GF+D + FN +L+ K WR+ + +L +++F++ YF
Sbjct: 810 QKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFS 869
Query: 1106 RTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGA---PLLF 1162
+D A +G RPSYAW SIL + + +G R IG+G+K VW D WL G+ PL
Sbjct: 870 NSDFLSATRGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNR 929
Query: 1163 REDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPWT 1222
R + + VS LI WN+ +L +F V+ IL PLF +D W +
Sbjct: 930 RRFINVDL---KVSQLIDPTSRNWNLNMLRDLFPWKDVEIILK-QRPLFFKEDSFCWLHS 985
Query: 1223 VNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGIL 1282
NG+YS K+GY+ L + + SL+ K W P+ + W+A+ G +
Sbjct: 986 HNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAI 1045
Query: 1283 PVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAIRVASFS-SLHEL 1341
PV LR RG+ DD C +C E ET +H+ CP + +W + L+ + FS S++
Sbjct: 1046 PVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYTN 1105
Query: 1342 AVAFLSTAEEDFIP----VFQAW-LYTLWEARNALIFNNK 1376
+ +++ +P W L+ LW+ RNAL+F K
Sbjct: 1106 MSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGK 1145
Score = 189 bits (479), Expect = 1e-47
Identities = 134/459 (29%), Positives = 221/459 (47%), Gaps = 37/459 (8%)
Query: 412 PDVVFAMETKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSAS 471
PD++F METK V K G + V+ G R+GGL + W S +E++ L A
Sbjct: 7 PDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEG----RSGGLAIFWKSHLEIEFLYAD 62
Query: 472 LNHIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDIL 531
N L + + VYG P + + W+ + S+ + R W GDFNDI
Sbjct: 63 KN--LMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEHLNSIGLK-RAEAWCLIGDFNDIR 119
Query: 532 SPTDKLGG---DPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYA 588
S +KLGG P ++ + ++ CS +H++G +G FTW R V+ +LD
Sbjct: 120 SNDEKLGGPRRSPSSFQCFEHMLLNCS---MHELGSTGNSFTWGGNRN-DQWVQCKLDRC 175
Query: 589 LANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECK 648
N AW +++P L ++ SDH P+L+ + EL R FR+++ + C
Sbjct: 176 FGNPAWFSIFPNAHQWFLEKFGSDHRPVLVKFTNDN---ELFR-GQFRYDKRLDDDPYCI 231
Query: 649 ELVTEAWGEGSAMGLTAKLSSL---GSSLKDWGREKFGDIPKKISDTKAL--LQKLQWQT 703
E++ +W + G + SL ++ W K SDT A +++L+
Sbjct: 232 EVIHRSWNSAMSQGTHSSFFSLIECRRAISVW---------KHSSDTNAQSRIKRLRKDL 282
Query: 704 QSEQVVRET--KEAEIALDTLLM---QQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRK 758
+E+ ++ E D L + +E++W Q+SR WL GDKNT FFH R
Sbjct: 283 DAEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERL 342
Query: 759 RNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQDAANLVANRVTAAHLEVL 818
+N + + D+ +EF + + G++ +F +LFTS+ + + +VT+ L
Sbjct: 343 KNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNL 402
Query: 819 SEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDII 857
+ T+L+V A+F ++ APG DGF ALF+Q+HWD++
Sbjct: 403 IQEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLV 441
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 324 bits (831), Expect = 2e-88
Identities = 185/603 (30%), Positives = 313/603 (51%), Gaps = 23/603 (3%)
Query: 866 LQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASG 925
+++L + G+KVA+ AP ISHLLFADD++ + + I I+ Y ASG
Sbjct: 652 VKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASG 711
Query: 926 QVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDR 985
Q +N KS + +++ + +K+ LG++ YLGLP SK +++KDR
Sbjct: 712 QRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDR 771
Query: 986 VWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDA 1045
+ KK+ GW+ FLS G+E+L+K+VA A+P+Y MSCF +P ++C +++ ++A+F+W
Sbjct: 772 LGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKK 831
Query: 1046 SRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFP 1105
RG+HW W L R K GGLGF++ +AFN++L+GK WR+ ++ D+L+A++FK+ YF
Sbjct: 832 EGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFS 891
Query: 1106 RTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPG----GAPLL 1161
++D +A G RPS+AW SI ++++ +G R IG+G+ + VW D W+ A +
Sbjct: 892 KSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAKPAKAAQAV 951
Query: 1162 FREDLVAEW---GIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLF 1218
R LV+++ IH+V DL++ WN L+ ++F T + ILA+ D
Sbjct: 952 KRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFT 1011
Query: 1219 WPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPSL---WKKFWRSEALPRCKELAW 1275
W ++ +G YS KSGY ++ + + ++ L PSL +++ W+ + P+ W
Sbjct: 1012 WEYSRSGHYSVKSGYWVMTEIINQ---RNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLW 1068
Query: 1276 RAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAI----- 1330
R + L V +L R + + C C ET +H+ CP + W SPL
Sbjct: 1069 RCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGE 1128
Query: 1331 -RVASFSSLHELAVAFLSTAEEDFIPVFQAW-LYTLWEARNALIFNNKPVSMESLLQRLS 1388
+ F ++H + S EE W L+ LW+ RN L+F + + ++ + +
Sbjct: 1129 WAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKAT 1188
Query: 1389 TLLEMPTLVYAP---VGRAQRDMASSWSRPQRGTTKVNVDASFQYTIFSIHYAYFILNSL 1445
++ P V + RD W P G K N D ++ + + + + N
Sbjct: 1189 EDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHT 1248
Query: 1446 LRI 1448
R+
Sbjct: 1249 GRL 1251
Score = 238 bits (607), Expect = 2e-62
Identities = 146/484 (30%), Positives = 235/484 (48%), Gaps = 23/484 (4%)
Query: 384 MRLLMWNCRGLGNPQAVLALKGLIHSKAPDVVFAMETKM---YTSEVLKNRGMGGLPNVF 440
MR+L WNC+G+GN V L+ + P+V+F ETK Y V+ + G L V
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60
Query: 441 PVQCAGSGRSRAGGLFLMWSSEVEVDILSASLNHIAFSLVHPDHHDPMHMLAVYGFPEEQ 500
P+ ++GGL LMW V++ +L + I L+ D ++ +YG P +
Sbjct: 61 PI-------GKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKE--FYLTCIYGEPVQA 111
Query: 501 NKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLH 560
+ W+ + L R PW+ GDFN+++ P++K+GG + E ++C L
Sbjct: 112 ERGELWERLTRL-GLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLW 170
Query: 561 DVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICC 620
+V SGY+F+W R V+ RLD +AN AW L+P + T+L + SDH+PL+
Sbjct: 171 EVNHSGYQFSWYGNRN-DELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNL 229
Query: 621 GSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEGSAMG---LTAKLSSLGSSLKDW 677
RK + F++++ W+Q E K+L+ W + S + K++S + W
Sbjct: 230 VGDNWRK----WAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMMEKIASCRREISKW 285
Query: 678 GREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRAN 737
R +I + + L Q ++ RE + L +E +W ++SR
Sbjct: 286 KRVSKPSSAVRIQELQFKLDAATKQIPFDR--RELARLKKELSQEYNNEEQFWQEKSRIM 343
Query: 738 WLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSPS 797
W+R GD+NT +FH RR +N I+K+ D+ GRE+ D ++GRV YF LF S
Sbjct: 344 WMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVG 403
Query: 798 GMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDII 857
+ + V+ L P TK +V+ A F ++P K PG DG YQ+ W+ +
Sbjct: 404 YTVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETM 463
Query: 858 GDDV 861
GD +
Sbjct: 464 GDQI 467
>At3g45550 putative protein
Length = 851
Score = 312 bits (800), Expect = 8e-85
Identities = 193/591 (32%), Positives = 290/591 (48%), Gaps = 28/591 (4%)
Query: 856 IIGDDVAHFCLQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISD 915
+ GD ++H ++ AS G + G+++ AP I+HL FADD++ F +A + + D
Sbjct: 267 LCGDILSH----LIKVKASSGDIRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKD 322
Query: 916 ILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSK 975
+ YE SGQ IN+ KS+++ V ++ LK LL + KYLGLP G+ K
Sbjct: 323 VFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKK 382
Query: 976 SQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGM 1035
++FN++ DRV ++ W KFLS AG+E+L+KSVA A+P Y MSCF LP + +E++ +
Sbjct: 383 KEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESL 442
Query: 1036 IAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLL 1095
+ F+W +++RGI WV W L K +GGLGFRD FN +L+ K WRI P++L
Sbjct: 443 LMNFWWEKASNKRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLF 502
Query: 1096 AQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLP 1155
A++ KA YF + DAK + SY W+S+L + KG R+ IGDGK +++ DN +
Sbjct: 503 ARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALLRKGTRYVIGDGKTIRLGIDNVVD 562
Query: 1156 GGAPLLFREDLVAEWGIHLVSDLIVQPHGG---WNVPLLEMVFAPATVQRILAVPVPLFR 1212
P R L E L D + Q G W+ L+ + I + +
Sbjct: 563 SHPP---RPLLTDEQHNGLSLDNLFQHRGHSRCWDNAKLQTFVDQSDHDYIKRIYLSTRS 619
Query: 1213 GDDCLFWPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPS--LWKKFWRSEALPRC 1270
D L W + G Y+ +SGY L T + ++ + H S L K W +P+
Sbjct: 620 KTDRLIWSYNSTGDYTVRSGYWL---STHDPSNTIPTMAKPHGSVDLKTKIWNLPIMPKL 676
Query: 1271 KELAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAI 1330
K WR + LP L RGM +D CP C E E+ +H CP W S +
Sbjct: 677 KHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPL 736
Query: 1331 RVASFSS------LHELAVAFLSTAEEDFIPVFQAW-LYTLWEARNALIFNNKPVSMESL 1383
+S S + + + +T D + W L+ +W+ARN ++FNN S
Sbjct: 737 YRSSILSNNIEDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVVFNNLRESPSIT 796
Query: 1384 LQRLSTLLE---MPTLVYAPVGRAQRDMA---SSWSRPQRGTTKVNVDASF 1428
+ R T P +R A ++W +PQ K N DASF
Sbjct: 797 VVRAKAETNEWLNATQTQGPRRLPKRTTAAGNTTWVKPQMPYIKCNFDASF 847
Score = 53.9 bits (128), Expect = 7e-07
Identities = 32/90 (35%), Positives = 49/90 (53%), Gaps = 8/90 (8%)
Query: 776 DPNIGRVLGDYFTSLFTSS----SPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEAL 831
D IG +FT +FT++ SP D + V N + + L++ F ++ EA+
Sbjct: 3 DGEIGCHAQKFFTDIFTTNGIQVSPIDFADFPSSVTNIINSE----LTQDFRDSEIFEAI 58
Query: 832 FQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
Q+ KAPG DG A FY++ WDI+G+DV
Sbjct: 59 CQIGDDKAPGPDGLTARFYKQCWDIVGNDV 88
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 306 bits (784), Expect = 6e-83
Identities = 190/591 (32%), Positives = 294/591 (49%), Gaps = 28/591 (4%)
Query: 856 IIGDDVAHFCLQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISD 915
+ GD ++H ++NG AS G L G+++ AP I+HL FADD++ F +A + + D
Sbjct: 802 LCGDILSH----LINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKD 857
Query: 916 ILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSK 975
+ YE SGQ IN+ KSM++ V ++ ++LKQ+L + KYLGLP G+ K
Sbjct: 858 VFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKK 917
Query: 976 SQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGM 1035
++F ++ DRV K+ W +FLS AG+E+++KSVA A+P Y MSCF LP + +E++ +
Sbjct: 918 KEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESL 977
Query: 1036 IAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLL 1095
+ F+W +++RGI WV W L K +GGLGFRD FN +L+ K WR+ P++L
Sbjct: 978 LMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLF 1037
Query: 1096 AQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLP 1155
A++ KA YF + DAK + SY WAS+L + KG R IGDG+ +++ DN +
Sbjct: 1038 ARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVD 1097
Query: 1156 GGAPL-LFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGD 1214
P L E+ E I+ + + + W+ + + I + + +
Sbjct: 1098 SHPPRPLNTEETYKEMTINNLFER-KGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKP 1156
Query: 1215 DCLFWPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPS--LWKKFWRSEALPRCKE 1272
D + W + G Y+ +SGY L LT + ++ + H S L + W +P+ K
Sbjct: 1157 DKIIWNYNTTGEYTVRSGYWL---LTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKH 1213
Query: 1273 LAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCP-AVQPLWFASPLAIR 1331
WRA+ L L RGM +D CP C E E+ +H CP A W + IR
Sbjct: 1214 FLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIR 1273
Query: 1332 VASFSSLHELAVAFL-----STAEEDFIPVFQAWL-YTLWEARNALIFNNKPVSMESLLQ 1385
S+ E ++ + T DF + WL + +W+ARN ++FN S +
Sbjct: 1274 NQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV- 1332
Query: 1386 RLSTLLEM-----PTLVYAPVGRAQRDMASS---WSRPQRGTTKVNVDASF 1428
LS E T + R +A + W P K N DA F
Sbjct: 1333 -LSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGF 1382
Score = 194 bits (493), Expect = 3e-49
Identities = 134/457 (29%), Positives = 216/457 (46%), Gaps = 36/457 (7%)
Query: 418 METKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSASL----N 473
+ET +V K G PNV G R+GGL LMW + V + ++S +
Sbjct: 190 LETLNQCDKVCKLAYDLGFPNVITQPPNG----RSGGLALMWKNNVSLSLISQDERLIDS 245
Query: 474 HIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSP 533
H+ F+ + ++ VYG P + + + WQ ++ + R+ WL GDFN+ILS
Sbjct: 246 HVTFN------NKSFYLSCVYGHPTQSERHQLWQTLEHIS-DNRNAEWLLVGDFNEILSN 298
Query: 534 TDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDA 593
+K+GG + S CD+ D+ G RF+W +R TV+ LD N A
Sbjct: 299 AEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVGERHTH-TVKCCLDRVFINSA 357
Query: 594 WDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTE 653
W A +P E L SDH P+L+ R R+ +FRF+ + K +V
Sbjct: 358 WTATFPYAETEFLDFTGSDHKPVLVHFNESFPR----RSKLFRFDNRLIDIPTFKRIVQT 413
Query: 654 AWG---EGSAMGLTAKLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQ--SEQV 708
+W + +T ++SS ++ + ++I ++ L + T+ Q+
Sbjct: 414 SWRTNRNSRSTPITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQL 473
Query: 709 VRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDD 768
+ + +E+ L +EI+W Q+SR W++ GD+NT +FH R +N + I DD
Sbjct: 474 IPQLQES---LAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDD 530
Query: 769 GGREFVDDPNIGRVLGDYFTSLFTSS----SPSGMQDAANLVANRVTAAHLEVLSEPFTK 824
GR F D IG D+FT++F+++ SP D + V N V L++ F+
Sbjct: 531 QGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLD----LTKEFSD 586
Query: 825 LDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
++ +A+ Q+ KAPG DG A FY+ WDI+G DV
Sbjct: 587 TEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDV 623
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 304 bits (779), Expect = 2e-82
Identities = 190/591 (32%), Positives = 293/591 (49%), Gaps = 28/591 (4%)
Query: 856 IIGDDVAHFCLQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISD 915
+ GD ++H ++NG AS G L G+++ AP I+HL FADD++ F +A + + D
Sbjct: 1028 LCGDILSH----LINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKD 1083
Query: 916 ILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSK 975
+ YE SGQ IN+ KSM++ V ++ + LKQ+L + KYLGLP G+ K
Sbjct: 1084 VFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKK 1143
Query: 976 SQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGM 1035
++F ++ DRV K+ W +FLS AG+E+++KSVA A+P Y MSCF LP + +E++ +
Sbjct: 1144 KEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESL 1203
Query: 1036 IAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLL 1095
+ F+W +++RGI WV W L K +GGLGFRD FN +L+ K WR+ P++L
Sbjct: 1204 LMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLF 1263
Query: 1096 AQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLP 1155
A++ KA YF + DAK + SY WAS+L + KG R IGDG+ +++ DN +
Sbjct: 1264 ARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVD 1323
Query: 1156 GGAPL-LFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGD 1214
P L E+ E I+ + + + W+ + + I + + +
Sbjct: 1324 SHPPRPLNTEETYKEMTINNLFER-KGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKP 1382
Query: 1215 DCLFWPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPS--LWKKFWRSEALPRCKE 1272
D + W + G Y+ +SGY L LT + ++ + H S L + W +P+ K
Sbjct: 1383 DKIIWNYNTTGEYTVRSGYWL---LTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKH 1439
Query: 1273 LAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLA-IR 1331
WRA+ L L RGM +D CP C E E+ +H CP W S + IR
Sbjct: 1440 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIR 1499
Query: 1332 VASFSSLHELAVAFL-----STAEEDFIPVFQAWL-YTLWEARNALIFNNKPVSMESLLQ 1385
S+ E ++ + T DF + WL + +W+ARN ++FN S +
Sbjct: 1500 NQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTV- 1558
Query: 1386 RLSTLLEM-----PTLVYAPVGRAQRDMASS---WSRPQRGTTKVNVDASF 1428
LS E T + R +A + W P K N DA F
Sbjct: 1559 -LSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGF 1608
Score = 203 bits (517), Expect = 5e-52
Identities = 141/482 (29%), Positives = 227/482 (46%), Gaps = 36/482 (7%)
Query: 393 GLGNPQAVLALKGLIHSKAPDVVFAMETKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRA 452
G+G P L L D++F +ET +V K G PNV G R+
Sbjct: 391 GIGMPLTQSRLFRLFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNG----RS 446
Query: 453 GGLFLMWSSEVEVDILSASL----NHIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQL 508
GGL LMW + V + ++S +H+ F+ + ++ VYG P + + + WQ
Sbjct: 447 GGLALMWKNNVSLSLISQDERLIDSHVTFN------NKSFYLSCVYGHPTQSERHQLWQT 500
Query: 509 VKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYR 568
++ + R+ WL GDFN+ILS +K+GG + S CD+ D+ G R
Sbjct: 501 LEHIS-DNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDR 559
Query: 569 FTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKE 628
F+W +R TV+ LD N AW A +P E+ L SDH P+L+ R
Sbjct: 560 FSWVGERHTH-TVKCCLDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVHFNESFPR-- 616
Query: 629 LQRTSMFRFEELWLQEEECKELVTEAWG---EGSAMGLTAKLSSLGSSLKDWGREKFGDI 685
R+ +FRF+ + K +V +W + +T ++SS ++ +
Sbjct: 617 --RSKLFRFDNRLIDIPTFKRIVQTSWRTNRNSRSTPITERISSCRQAMARLKHASNLNS 674
Query: 686 PKKISDTKALLQKLQWQTQ--SEQVVRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGD 743
++I ++ L + T+ Q++ + +E+ L +EI+W Q+SR W++ GD
Sbjct: 675 EQRIKKLQSSLNRAMESTRRVDRQLIPQLQES---LAKAFSDEEIYWKQKSRNQWMKEGD 731
Query: 744 KNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSS----SPSGM 799
+NT +FH R +N + I DD GR F D IG D+FT++F+++ SP
Sbjct: 732 QNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDF 791
Query: 800 QDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGD 859
D + V N V L++ F+ ++ +A+ Q+ KAPG DG A FY+ WDI+G
Sbjct: 792 ADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGY 847
Query: 860 DV 861
DV
Sbjct: 848 DV 849
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 294 bits (753), Expect = 2e-79
Identities = 179/576 (31%), Positives = 287/576 (49%), Gaps = 21/576 (3%)
Query: 866 LQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASG 925
+ +L + + GI+ P ++HLLF DD L RAT ++ + LS Y SG
Sbjct: 604 IHILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISG 663
Query: 926 QVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDR 985
Q+IN++KS ++ V + + +K G+ KYLGLP + SK +F ++K++
Sbjct: 664 QLINVEKSSITFGVKVDEDTKRWIKNRSGIHLEGGTGKYLGLPENLSGSKQDLFGYIKEK 723
Query: 986 VWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDA 1045
+ L GW +K LS+ G+E+L+KS+A A+P Y+M+CF LP LC +L ++ F+W
Sbjct: 724 LQSHLSGWYDKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSME 783
Query: 1046 SRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFP 1105
IHW+ L K GG GF+D + FN +L+ K WR++S ++++QIFK+ YF
Sbjct: 784 FSNKIHWIGGKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFM 843
Query: 1106 RTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGG---APLLF 1162
TD +A++G RPSY W SIL + + + G + IG+G++ VW D WL G P+
Sbjct: 844 NTDFLNARQGTRPSYTWRSILYGRELLNGGLKRLIGNGEQTNVWIDKWLFDGHSRRPM-- 901
Query: 1163 REDLVAEWGIHL-VSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPW 1221
+L + IH+ VS LI WN+ L +F VQ I+ PL +D W
Sbjct: 902 --NLHSLMNIHMKVSHLIDPLTRNWNLKKLTELFHEKDVQLIMH-QRPLISSEDSYCWAG 958
Query: 1222 TVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPS---LWKKFWRSEALPRCKELAWRAI 1278
T NG+Y+ KSGY + ++E + +++PS L+ K W E +P+ K W+A+
Sbjct: 959 TNNGLYTVKSGY---ERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKAL 1015
Query: 1279 KGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAIRVASF-SS 1337
KG L V LR RG+ D C C E ET +H+ CP + +W S + F +S
Sbjct: 1016 KGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQCPFARQVWALSLIQAPATGFGTS 1075
Query: 1338 LHELAVAFLSTAEEDFIP----VFQAW-LYTLWEARNALIFNNKPVSMESLLQRLSTLLE 1392
+ + ++ IP W L+ +W+ RN +F ++ ++ +
Sbjct: 1076 IFSNINHVIQNSQNFGIPRHMRTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECN 1135
Query: 1393 MPTLVYAPVGRAQRDMASSWSRPQRGTTKVNVDASF 1428
+ W+ P G K N+ ++
Sbjct: 1136 LWINAQEKSSGGVSPSEHKWNPPPAGELKCNIGVAW 1171
Score = 129 bits (323), Expect = 2e-29
Identities = 94/396 (23%), Positives = 168/396 (41%), Gaps = 19/396 (4%)
Query: 451 RAGGLFLMWSSEVEVDILSASLNHIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVK 510
++GGL + W + +E+D L N + + + VYG P + +
Sbjct: 27 KSGGLAIFWKNHLEIDFLFEDKNLLDLKV--SQGKKSWFVSCVYGNPVLHLRYLLLDKLS 84
Query: 511 SLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFT 570
S+ Q R+ W GDFNDILS KLGG + Q CD+H +G SG FT
Sbjct: 85 SIGVQ-RNSAWCMIGDFNDILSNDGKLGGPSRLISSFQPFKNMLLNCDMHQMGSSGNSFT 143
Query: 571 WSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQ 630
W R ++ +LD N W ++ + L + S H P+L+ + +
Sbjct: 144 WGGTRN-DQWIQCKLDRCFGNSEWFTMFSNSHQWFLEKLGSHHRPVLV----NFVNDQEV 198
Query: 631 RTSMFRFEELWLQEEECKELVTEAW---GEGSAMGLTAKLSSLGSSLKDWGREKFGDIPK 687
F +++ + ++ +C +W G ++ ++ W + +
Sbjct: 199 FRGQFCYDKRFAEDPQCAASTLSSWIGNGISDVSSSMLRMVKCRKAISGWKKNSDFNAQN 258
Query: 688 KISDTKALLQK---LQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDK 744
+I ++ L + Q+ S V +T+ L ++E +W +S+ WL GD+
Sbjct: 259 RILRLRSELDEEKSKQYPCWSRISVIQTQ-----LGVAFREEESFWRLKSKDKWLFGGDR 313
Query: 745 NTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQDAAN 804
N+ FF R +N + + D+ G E + G + YF +LF SS P+ Q A +
Sbjct: 314 NSKFFQAMVKANRTKNSLRFLVDENGNEHTLNREKGNIASVYFENLFMSSYPANSQSALD 373
Query: 805 LVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAP 840
RV+ + L++ T+L++ A+F ++ AP
Sbjct: 374 GFKTRVSEEMNQELTQAVTELEIHSAVFSINVESAP 409
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 286 bits (733), Expect = 5e-77
Identities = 174/588 (29%), Positives = 286/588 (48%), Gaps = 46/588 (7%)
Query: 864 FCLQVLNGTASPGS----LHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILST 919
FC +VL+ +HG+K+ + ISHLLFADD++ F RA+ ++ I
Sbjct: 1008 FCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQLALIFKK 1067
Query: 920 YEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIF 979
YE+ASGQ IN KS + + + L +LLG+ V KYLGLP +G+ K ++F
Sbjct: 1068 YEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELF 1127
Query: 980 NFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKF 1039
++ +V ++ +GW +LS AG+E++IK++A A+P Y M+CF+LP +C E++ +I F
Sbjct: 1128 EYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEINSLITAF 1187
Query: 1040 FWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIF 1099
+W +++G LGF+D FN +L+ K WRI + P +LLA+++
Sbjct: 1188 WWG------------------KENEGDLGFKDLHQFNRALLAKQAWRILTNPQSLLARLY 1229
Query: 1100 KAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGAP 1159
K Y+P T A KG SY W SI KL+ +G R R+GDG+ ++W D WLP P
Sbjct: 1230 KGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDPWLPTLPP 1289
Query: 1160 LLFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFW 1219
R ++ E V+DL + W+ + E V P Q ++ + + D W
Sbjct: 1290 RPARGPILDE--DMKVADLWRENKREWDPVIFEGVLNPEDQQLAKSLYLSNYAARDSYKW 1347
Query: 1220 PWTVNGMYSSKSGYQLLQ--SLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRA 1277
+T N Y+ +SGY + +LT+E + + G L ++ WR + P+ K WR
Sbjct: 1348 AYTRNTQYTVRSGYWVATHVNLTEEEIINPLEG---DVPLKQEIWRLKITPKIKHFIWRC 1404
Query: 1278 IKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPL--AIRVASF 1335
+ G L LR R + D C C +ET +H+ C Q +W ++ + R+
Sbjct: 1405 LSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGSNRLCFT 1464
Query: 1336 SSLHELAVAFLSTAEEDFIPVFQA----W-LYTLWEARNALIFNN--------KPVSMES 1382
+L E L + +P+ W ++ LW++RN +F + +
Sbjct: 1465 DNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQLDRFPWKVAQKAEQE 1524
Query: 1383 LLQRLSTLLEMPTLVYAPVGRAQRDMASS--WSRPQRGTTKVNVDASF 1428
+ + T++ + + R ++ S WS P G K N D+ +
Sbjct: 1525 ATEWVETMVNDTAISHNTAQSNDRPLSRSKQWSSPPEGFLKCNFDSGY 1572
Score = 219 bits (557), Expect = 1e-56
Identities = 148/502 (29%), Positives = 232/502 (45%), Gaps = 29/502 (5%)
Query: 374 GGCGAAPPSSMRLLMWNCRGLGNPQAVLALKGLIHSKAPDVVFAMETKM---YTSEVLKN 430
GG G S MR+ WNC+GLG P V L+ + D++F +ETK YT ++
Sbjct: 354 GGAGTTT-SPMRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDL--- 409
Query: 431 RGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSASLNHIAFSLVHPDHHDPMHM 490
G+ F C S R +GGL + W + + ++S + + + + + + ++
Sbjct: 410 ----GVKMGFEDMCIISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFN--FYL 463
Query: 491 LAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEV 550
+YG P + W+ ++ + R PW+ GDFN+IL+ +K GG + +Q
Sbjct: 464 SCIYGHPIPSERHHLWEKLQRVSAH-RSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNF 522
Query: 551 MATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYR 610
+ C++ D+ G ++W KR T+E LD N W A +P E LP
Sbjct: 523 TNMINCCNMKDLKSKGNPYSWVGKRQNE-TIESCLDRVFINSDWQASFPAFETEFLPIAG 581
Query: 611 SDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEG---SAMGLTAKL 667
SDH P++I K Q FR++ Q E+ + V W G S G KL
Sbjct: 582 SDHAPVIIDIAEEVCTKRGQ----FRYDRRHFQFEDFVDSVQRGWNRGRSDSHGGYYEKL 637
Query: 668 SSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQ-TQSEQVVRETKEAEIALDTLLMQQ 726
L W R + +KI K + + T Q + ++ L+ +
Sbjct: 638 HCCRQELAKWKRRTKTNTAEKIETLKYRVDAAERDHTLPHQTILRLRQD---LNQAYRDE 694
Query: 727 EIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDY 786
E++W +SR W+ GD+NT FF+ R+ RN I+ I D G E D IG+V +Y
Sbjct: 695 ELYWHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENY 754
Query: 787 FTSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFP 846
F LFT++ S ++ + +A +VT L + T +V +A+F + +APG DGF
Sbjct: 755 FADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFT 814
Query: 847 ALFYQRHWDIIGDDVAHFCLQV 868
A FY WD+IG+DV CL V
Sbjct: 815 AAFYHHLWDLIGNDV---CLMV 833
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 284 bits (726), Expect = 3e-76
Identities = 166/516 (32%), Positives = 268/516 (51%), Gaps = 11/516 (2%)
Query: 866 LQVLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASG 925
+ +LN G + GI+ P ++HLLFADD +L +A+ E A I LS Y SG
Sbjct: 381 IHILNQAEKIGKISGIQFNGTGPSVNHLLFADDTLLICKASQLECAEIMHCLSQYGHISG 440
Query: 926 QVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDR 985
Q+IN +KS ++ V + + + G++ KYLGLP SK +F F+K++
Sbjct: 441 QMINSEKSAITFGAKVNEETKQWIMNRSGIQTEGGTGKYLGLPECFQGSKQVLFGFIKEK 500
Query: 986 VWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDA 1045
+ +L GW K LS+ G+++L+KS+A A P Y M+CF L +LC +L ++ F+W
Sbjct: 501 LQSRLSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQ 560
Query: 1046 SRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFP 1105
++ IHW+ L K GG GF+D + FN +L+ K R+++ D+LL+QI K+ Y+
Sbjct: 561 DKKKIHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYM 620
Query: 1106 RTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGAPLLFRED 1165
+D A KG RPSYAW SIL + + G + IG+G+ VW DNW+ P E
Sbjct: 621 NSDFLSATKGTRPSYAWQSILYGRELLVSGLKKIIGNGENTYVWMDNWIFDDKPRR-PES 679
Query: 1166 LVAEWGIHL-VSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPWTVN 1224
L I L VS LI WN+ +L +F +Q I+ P+ D W T +
Sbjct: 680 LQIMVDIQLKVSQLIDPFSRNWNLNMLRDLFPWKEIQ-IICQQRPMASRQDSFCWFGTNH 738
Query: 1225 GMYSSKSGYQLL-QSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILP 1283
G+Y+ KS Y L + + ++ + +L+P L+ K W + P+ K W+ +KG +
Sbjct: 739 GLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNP-LFGKIWNLNSAPKIKVFLWKVLKGAVA 797
Query: 1284 VRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPL-----AIRVASFSSL 1338
V LR RG+ ++D C +C + ET +H+ CP + +W +P+ + F+++
Sbjct: 798 VEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNV 857
Query: 1339 HELAVAFLSTAEEDFIPVFQAW-LYTLWEARNALIF 1373
+ + +T + W ++ LW+ RN +F
Sbjct: 858 NHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKRLF 893
Score = 88.2 bits (217), Expect = 3e-17
Identities = 52/196 (26%), Positives = 91/196 (45%), Gaps = 2/196 (1%)
Query: 666 KLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQ 725
+L ++ W RE + +I+ + L K + T + + L +
Sbjct: 3 RLVECRKAISQWKRENDFNAKSRITKLRRELDKEKSATFPSWT--QISLLQDVLGDAYRE 60
Query: 726 QEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGD 785
+E +W +SR W+ GDKN+ FF R N + + D+ G E + G++
Sbjct: 61 EEDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKIAVT 120
Query: 786 YFTSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGF 845
+F LF+SS PS M RVT + L++ + ++ +A+F ++ APG DGF
Sbjct: 121 FFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGF 180
Query: 846 PALFYQRHWDIIGDDV 861
ALF+QR W ++ + +
Sbjct: 181 TALFFQRQWPLVKNQI 196
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 272 bits (695), Expect = 1e-72
Identities = 158/468 (33%), Positives = 244/468 (51%), Gaps = 13/468 (2%)
Query: 865 CLQVLNGTASPGS----LHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTY 920
C +VL+G + L G++V+ P ++HLLFADD + F+++ +S+ILS Y
Sbjct: 542 CTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRY 601
Query: 921 EKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFN 980
KASGQ IN KS ++ S + ++K++L ++ KYLGLP G+ K IF
Sbjct: 602 GKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFG 661
Query: 981 FVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFF 1040
+ D++ +K W +FLS+AG++V++K+V ++P Y MSCF LP +LC ++ ++ +F+
Sbjct: 662 AIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFW 721
Query: 1041 WAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFK 1100
W R WV WS L K+ GGLGFRD + N SL+ K WR+ + P++LL++I
Sbjct: 722 WDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILL 781
Query: 1101 AAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWLPGGAPL 1160
Y + + K +PS+ W SI+ + I +G W I +G+KV +W D WL PL
Sbjct: 782 GKYCHSSSFMECKLPSQPSHGWRSIIAGREILKEGLGWLITNGEKVSIWNDPWLSISKPL 841
Query: 1161 LFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWP 1220
+ + E VS LI Q W+ + ++ P I +P P RG D L W
Sbjct: 842 VPIGPALREHQDLRVSALINQNTLQWDWNKIAVIL-PNYENLIKQLPAPSSRGVDKLAWL 900
Query: 1221 WTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKG 1280
+G Y+S+SGY + + + + N +LWK + LP+ K L W+A
Sbjct: 901 PVKSGQYTSRSGYGI---ASVASIPIPQTQFNWQSNLWK----LQTLPKIKHLMWKAAME 953
Query: 1281 ILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPL 1328
LPV + L R + C CG E T H+F C +W +PL
Sbjct: 954 ALPVGIQLVRRHISPSAACHRCGAPESTT-HLFFHCEFAAQVWELAPL 1000
Score = 137 bits (345), Expect = 5e-32
Identities = 90/334 (26%), Positives = 149/334 (43%), Gaps = 7/334 (2%)
Query: 528 NDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDY 587
N+IL ++K GG P + + + S L D+ SG F+W R V +RLD
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMR-YDWFVRQRLDR 94
Query: 588 ALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEEC 647
A++N++W +P +L SDH PL++ ++R FRF+ +
Sbjct: 95 AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVFVDEA----RVKRRGQFRFDNRLRDNDVV 150
Query: 648 KELVTEAWGEGSAMGLTAKLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQ 707
L+ E W + K++ + +W R + + + I T+ L++
Sbjct: 151 NALIQETWTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALTADPPNP 210
Query: 708 VVRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRD 767
A L+ +E +W QRSR WL GD+NT +FH RR +N + + D
Sbjct: 211 TTIGALTA--TLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMED 268
Query: 768 DGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDV 827
G ++ I +++ YF +FTS S + V+ + L+ +V
Sbjct: 269 INGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEV 328
Query: 828 EEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
++A+F ++ +KAPG DGF A FY +W II DV
Sbjct: 329 KDAVFSINASKAPGPDGFTAGFYHSYWHIISTDV 362
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 271 bits (692), Expect = 3e-72
Identities = 173/541 (31%), Positives = 263/541 (47%), Gaps = 46/541 (8%)
Query: 865 CLQVLNGTA----SPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTY 920
C +VL+G G + GI+VA+ +P ++HLLFADD + F + +S+IL Y
Sbjct: 588 CTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKY 647
Query: 921 EKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFN 980
E ASGQ INL KS ++ S +K L + KYLGLP G+ K IF+
Sbjct: 648 ELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEHFGRRKRDIFS 707
Query: 981 FVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFF 1040
+ DR+ ++ W +FLS AG+++L+K+V ++PSY M CF LP SLC ++ ++ +F+
Sbjct: 708 SIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFW 767
Query: 1041 WAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFK 1100
W +R + WV W L ++GGLGFR+ +A K WRI +P +LL+++
Sbjct: 768 WDSKPDKRKMAWVSWDKLTLPINEGGLGFREIEA-------KLSWRILKEPHSLLSRVLL 820
Query: 1101 AAYFPRTDLWDAKKGYRPSYA---WASILRSKLIFDKGARWRIGDGKKVQVWRDNWL--- 1154
Y + D PS+A W IL + + KG W IG G + VW + WL
Sbjct: 821 GKYCNTSSFMDCSAS--PSFASHGWRGILAGRDLLRKGLGWSIGQGDSINVWTEAWLSPS 878
Query: 1155 ----PGGAPLLFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVPVPL 1210
P G P +DL V DLI WNV + P +I + +
Sbjct: 879 SPQTPIGPPTETNKDL-------SVHDLICHDVKSWNVEAIRK-HLPQYEDQIRKITINA 930
Query: 1211 FRGDDCLFWPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRC 1270
D L W +G Y++K+GY L + +S L + K W+ P+
Sbjct: 931 LPLQDSLVWLPVKSGEYTTKTGYALAK-------LNSFPASQLDFNWQKNIWKIHTSPKV 983
Query: 1271 KELAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAI 1330
K W+A+KG LPV +L R ++ + C CG + E++ H+ + CP + +W +P+
Sbjct: 984 KHFLWKAMKGALPVGEALSRRNIEAEVTCKRCG-QTESSLHLMLLCPYAKKVWELAPVLF 1042
Query: 1331 R--VASFSSLHELAV-----AFLSTAEEDFIPVFQAWLYTLWEARNALIFNNKPVSMESL 1383
A+ SS+ L V L P++ L+ LW+ARN LIF+N S E L
Sbjct: 1043 NPSEATHSSVALLLVDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRLIFDNHSCSEEGL 1102
Query: 1384 L 1384
+
Sbjct: 1103 V 1103
Score = 189 bits (480), Expect = 1e-47
Identities = 136/447 (30%), Positives = 206/447 (45%), Gaps = 40/447 (8%)
Query: 418 METKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSASLNHIAF 477
METK + K G + F + G +GGL L W VEV+IL A+ N I
Sbjct: 1 METKNQDEFISKTFDWMGYAHRFTIPPEGL----SGGLALYWKENVEVEILEAAPNFI-- 54
Query: 478 SLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKL 537
N+ W + SL Q R WL GDFNDIL ++K
Sbjct: 55 ----------------------DNRSVFWDKISSLGAQ-RSSAWLLTGDFNDILDNSEKQ 91
Query: 538 GGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDAL 597
GG + S L D+ +G +W R ++ RLD AL N +W L
Sbjct: 92 GGPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTR-YSHFIKSRLDRALGNCSWSEL 150
Query: 598 WPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGE 657
+P+++ +L SDH PL+ G+ L+R+ FRF+ ++EE + LV E W
Sbjct: 151 FPMSKCEYLRFEGSDHRPLVTYFGA----PPLKRSKPFRFDRRLREKEEIRALVKEVWEL 206
Query: 658 GSAMGLTAKLSSLGSSLKDWGREKFGDIPKKISDTKALLQK-LQWQTQSEQVVRE-TKEA 715
+ K+S S+ W +E+ + K I + L+ L ++ T+E
Sbjct: 207 ARQDSVLYKISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIPDPSLIGSITQEL 266
Query: 716 EIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVD 775
E A Q+E++W Q SR WL GD+N +FH RR N + I D G+EF +
Sbjct: 267 EAAY----RQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHE 322
Query: 776 DPNIGRVLGDYFTSLFTSSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMH 835
+ I + YF ++FT+S+ S +Q ++ +++ E L + + L+++EALF +
Sbjct: 323 EEQIASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSIS 382
Query: 836 PTKAPGLDGFPALFYQRHWDIIGDDVA 862
KAPG DGF A F+ +WDII DV+
Sbjct: 383 ADKAPGPDGFSASFFHAYWDIIEADVS 409
>At1g24640 hypothetical protein
Length = 1270
Score = 271 bits (692), Expect = 3e-72
Identities = 163/515 (31%), Positives = 252/515 (48%), Gaps = 36/515 (6%)
Query: 868 VLNGTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQV 927
+LN G+L GI+ ++ P++ HLLFADD++ +A+ ++ + IL Y A+GQ
Sbjct: 617 LLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQT 676
Query: 928 INLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDRVW 987
INL+KS ++ V + ++ LG+ YLGLP SK + +++KDR+
Sbjct: 677 INLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLK 736
Query: 988 KKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASR 1047
+KL W + LS+ G+EVL+KSVA A+P + MSCF LP + C L+ +A F+W
Sbjct: 737 EKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHS 796
Query: 1048 RGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRT 1107
R IHW W LC K GGLGFRD ++FN +L+ K WR+ PD LL+++ K+ YF T
Sbjct: 797 RKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDAT 856
Query: 1108 DLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVWRDNWL-PGGAPLLFREDL 1166
D DA RPS+ W SIL + + KG + R+GDG + VW D W+ G +R++L
Sbjct: 857 DFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAPWRKNL 916
Query: 1167 VAEWGIHLVSDLIVQPHGG-WNVPLLEMVFAPATVQRILAVPVPLFRGDDCLFWPWTVNG 1225
+ + + L ++ P G W+ +L +F P + RI A+ P+ D W +G
Sbjct: 917 I--YDVTLKVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQADFFVWKLNKSG 973
Query: 1226 MYSSKSGYQLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILPVR 1285
+S KS Y L + + S S L + W + P+ K W+
Sbjct: 974 DFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWK--------- 1024
Query: 1286 VSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAIRVASFS--SLHELAV 1343
+CG E+ +H CP + +W S FS S++
Sbjct: 1025 ---------------VCGELGESTNHTLFLCPLSRQIWALSDYPFPPDGFSNGSIYSNIN 1069
Query: 1344 AFLSTAEEDFIP-----VFQAWLYTLWEARNALIF 1373
L + P +F L+ +W+ RN+ IF
Sbjct: 1070 HLLENKDNKEWPINLRKIFPWILWRIWKNRNSFIF 1104
Score = 203 bits (517), Expect = 5e-52
Identities = 128/418 (30%), Positives = 203/418 (47%), Gaps = 21/418 (5%)
Query: 451 RAGGLFLMWSSEVEVDILSASLN----HIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTW 506
+ GGL L+W S V+VD+ N + F V+ + VYG P+ + + W
Sbjct: 27 KCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVN------FCVSCVYGDPDRSKRSQAW 80
Query: 507 QLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSG 566
+ + + RD W FGDFNDIL +K GG + + CDL ++ G
Sbjct: 81 ERISRIGVGRRD-KWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHG 139
Query: 567 YRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMR 626
FTW+ +R ++ RLD A N W +PV+ T L SDH P+LI + M
Sbjct: 140 NGFTWAGRRG-DHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLI----KLMS 194
Query: 627 KELQRTSMFRFEELWLQEEECKELVTEAWGEG---SAMGLTAKLSSLGSSLKDWGREKFG 683
+ FRF++ +L +E+ KE + W G + + + +L + SL W ++
Sbjct: 195 SQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNISVADRLRACRKSLSSWKKQNNL 254
Query: 684 DIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGD 743
+ KI+ +A L+K Q + + + + L ++E +W Q+SR WLR G+
Sbjct: 255 NSLDKINQLEAALEKEQ--SLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGN 312
Query: 744 KNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQDAA 803
+N+ +FH Q R+R IEK++D G + G V YF +LF SS+PSG D
Sbjct: 313 RNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWF 372
Query: 804 NLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
+ + RV+ E L + +++EA+F + P APG DG ALF+Q +W +G+ V
Sbjct: 373 SGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQV 430
>At3g31420 hypothetical protein
Length = 1491
Score = 270 bits (691), Expect = 3e-72
Identities = 178/603 (29%), Positives = 282/603 (46%), Gaps = 87/603 (14%)
Query: 852 RHWDIIGDDVAHFCLQVLNGTASPGSLH----GIKVAQKAPVISHLLFADDNILFARATI 907
RH D + + C +VL+ ++ GI+++ + P ISHLLFADD+I F A
Sbjct: 819 RHGDPLSPYLFILCAEVLSHMIKQAEINKKLKGIRLSTQGPFISHLLFADDSIFFTLANQ 878
Query: 908 NEAACISDILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGL 967
I + DT ++ LLG+ KYLGL
Sbjct: 879 RSCTAIKEP--------------------------DTK-RRMRHLLGIHNEGGEGKYLGL 911
Query: 968 PTIIGKSKSQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDS 1027
P K K ++FN++ ++V K +GW +KFLS+ G+EVL+K+VA A+P Y M+ F L
Sbjct: 912 PEQFNKKKKELFNYIIEKVKDKTQGWSKKFLSQGGKEVLLKAVALAMPVYSMNIFKLTKE 971
Query: 1028 LCAELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRI 1087
+C E+D ++A+F+W+ +G+HW W + K +GGLGF++ + FNL+L+GK W +
Sbjct: 972 VCEEIDSLLARFWWSSGNETKGMHWFTWKRMSIPKKEGGLGFKELENFNLALLGKQTWHL 1031
Query: 1088 YSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQ 1147
P+ L+A++ + YFP T++ +A +G R S+ W SIL + + KG R +GDG +
Sbjct: 1032 LQHPNCLMARVLRGRYFPETNVMNAVQGRRASFVWKSILHGRNLLKKGLRCCVGDGSLIN 1091
Query: 1148 VWRDNWLPGGAPLLFREDLVAEWGIHLVSDLIVQPHGGWNVPLLEMVFAPATVQRILAVP 1207
W D WLP +P P+ + P +V + A
Sbjct: 1092 AWLDPWLPLHSPR--------------------APYKQEDAPEQLLVCSTAR-------- 1123
Query: 1208 VPLFRGDDCLFWPWTVNGMYSSKSGYQLLQSLTQEGVSSSSSGGNLHP---SLWKKFWRS 1264
DD + W +T +GMY+ KS Y L L ++G + P L + W++
Sbjct: 1124 ------DDLIGWHYTKDGMYTVKSAYWLATHL------PGTTGTHPPPGDIKLKQLLWKT 1171
Query: 1265 EALPRCKELAWRAIKGILPVRVSLRIRGMDVDDRCPLCGCEEETNDHVFVCCPAVQPLWF 1324
+ P+ K W+ + G + LR R ++ C C +EET+ H+F C + W
Sbjct: 1172 KTAPKIKHFCWKILSGAIATGEMLRYRHINKQSICKRCCRDEETSQHLFFECDYAKATWR 1231
Query: 1325 AS--PLAIRVASFSSLHE--LAVAFLSTAEEDFIPVFQAW-LYTLWEARNALIFNNKPVS 1379
+ P I S +L E A+ + + ++ W L+ LW +RN L F K +
Sbjct: 1232 GAGLPNLIFQDSIVTLEEKFRAMFTFNPSTTNYWRQLPFWILWRLWRSRNILTFQQKHIP 1291
Query: 1380 MESLLQ--RLSTL----LEMPTLVYAPVGR--AQRDMASSWSRPQRGTTKVNVDASFQYT 1431
E +Q + L +E V P+ R + R A+ W+RP G K N D S+
Sbjct: 1292 WEVTVQLAKQDALEWQDIEDRVQVINPLSRRHSNRYAANRWTRPVCGWKKCNYDGSYSTI 1351
Query: 1432 IFS 1434
I S
Sbjct: 1352 INS 1354
Score = 174 bits (441), Expect = 3e-43
Identities = 126/457 (27%), Positives = 207/457 (44%), Gaps = 22/457 (4%)
Query: 413 DVVFAMETKMYTSEVLKNRGMGGLPNVFPVQCAGSGRSRAGGLFLMWSSEVEVDILSASL 472
D++ ETK + G N V G +GGL + W+S V++ + ++
Sbjct: 210 DIICLSETKQQDDRIRDVGAELGFCNHVTVPPDGL----SGGLVVFWNSSVDIFLCFSNS 265
Query: 473 NHIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILS 532
N + + + ++ VYG P ++ W+ ++ L + W GDFN+ILS
Sbjct: 266 NLVDLHV--KSNEGSFYLSFVYGHPNPSHRHHLWERLERLNTTRQGTAWFIMGDFNEILS 323
Query: 533 PTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALAND 592
+K GG Q+ C+ D+ G RF+W+ KR V LD +AN+
Sbjct: 324 NREKRGGRLRPERTFQDFRNMVRGCNFTDLKSVGDRFSWAGKRG-DHHVTCSLDRTMANN 382
Query: 593 AWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVT 652
W L+P +E + SDH PL+ ++ KE +R F ++ +E K++V
Sbjct: 383 EWHTLFPESETVFMEYGESDHRPLVTNISAQ---KE-ERRGFFSYDSRLTHKEGFKQVVL 438
Query: 653 EAWGE--GSAMG---LTAKLSSLGSSLKDWGREKFGDIPKKISDTKALLQKLQWQTQSEQ 707
W GS G L KL ++ W + + ++I K + KL +
Sbjct: 439 NQWHRRNGSFEGDSSLNRKLVECRQAISRWKKNNRVNAEERI---KIIRHKLDRAIATGT 495
Query: 708 VV-RETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIR 766
RE ++ L+ +EI+W +SR+ WL GD+NT +FH RR RN + ++
Sbjct: 496 ATPRERRQMRQDLNQAYADEEIYWQTKSRSRWLNAGDRNTRYFHSTTKTRRCRNRLLSVQ 555
Query: 767 DDGGREFVDDPNIGRVLGDYFTSLFTSSSPSGMQ--DAANLVANRVTAAHLEVLSEPFTK 824
D G D NI +V +YF L+ S+ + ++ D ++T E L P T+
Sbjct: 556 DSDGDICRGDENIAKVAINYFDDLYKSTPNTSLRYADVFQGFQQKITDEINEDLIRPVTE 615
Query: 825 LDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
L++EE++F + P++ P DGF A FYQ+ W I V
Sbjct: 616 LEIEESVFSVAPSRTPDPDGFTADFYQQFWPDIKQKV 652
>At4g10830 putative protein
Length = 1294
Score = 236 bits (602), Expect = 7e-62
Identities = 111/286 (38%), Positives = 172/286 (59%), Gaps = 4/286 (1%)
Query: 865 CLQVLN----GTASPGSLHGIKVAQKAPVISHLLFADDNILFARATINEAACISDILSTY 920
C +LN + G + GI++ P ++HL FADD++ F ++ + + D+ Y
Sbjct: 1009 CADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVY 1068
Query: 921 EKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFN 980
E SGQ IN+ KSM++ V T+ N LK +LG+++ KYLGLP G+ K +FN
Sbjct: 1069 EYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFN 1128
Query: 981 FVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFF 1040
++ +RV K+ W K+LS AG+E+++KSVA ++P Y MSCF LP ++ +E++ ++ F+
Sbjct: 1129 YIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFW 1188
Query: 1041 WAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFK 1100
W +A +R I W+ W L K +GGLGFRD FN +L+ K WR+ + P++L A+I K
Sbjct: 1189 WEKNAKKREIPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMK 1248
Query: 1101 AAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKV 1146
A YF + DAK+ SY W S+L + KG+R+ +GDGK V
Sbjct: 1249 ARYFREDSILDAKRQRYQSYGWTSMLAGLDVIKKGSRFIVGDGKTV 1294
Score = 165 bits (418), Expect = 2e-40
Identities = 134/475 (28%), Positives = 212/475 (44%), Gaps = 20/475 (4%)
Query: 392 RGLGNPQAVLALKGLIHSKAPDVVFAMETKMYTSEVLKN-RGMGGLPNVFPVQCAGSGRS 450
+G+G P L L DV+F +ET + EV+ N + G PNV G
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIET-LNKCEVISNLASVLGFPNVITQPPQG---- 424
Query: 451 RAGGLFLMWSSEVEVDILSASLNHIAFSLVHPDHHDPMHMLAVYGFPEEQNKVRTWQLVK 510
+GGL L+W V + L HI + ++ ++ VYG P + + W +
Sbjct: 425 HSGGLALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFE 482
Query: 511 SLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMATCSTCDLHDVGVSGYRFT 570
+L D PW+ GDFN+ILS +K+GG + + STCDL D+ G RF+
Sbjct: 483 NLSKTRND-PWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFS 541
Query: 571 WSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPLLICCGSRGMRKELQ 630
W +R TV+ LD A N L+P E+ L SDH PL + + E +
Sbjct: 542 WVGERH-SHTVKCCLDRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLSLE----KTETR 596
Query: 631 RTSMFRFEELWLQEEECKELVTEAWGE---GSAMGLTAKLSSLGSSLKDWGREKFGDIPK 687
+ FRF++ L+ K V W + G L ++ + ++ + +
Sbjct: 597 KMRPFRFDKRLLEVPHFKTYVKAGWNKAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRI 656
Query: 688 KISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRANWLRFGDKNTN 747
+I+ +A L K + R + L +E +W Q+SR W++ GD+NT
Sbjct: 657 RINQLQAALDKAMSSVNRTER-RTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTE 715
Query: 748 FFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSS-PSGMQDAANLV 806
FFH R N + I+D+ G + D IG ++FT ++ S+ P + D A
Sbjct: 716 FFHACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGF- 774
Query: 807 ANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDIIGDDV 861
VT + L++ + L++ A+ + KAPG DG A FY+ W+I+G DV
Sbjct: 775 KPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDV 829
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 216 bits (549), Expect = 1e-55
Identities = 152/550 (27%), Positives = 249/550 (44%), Gaps = 22/550 (4%)
Query: 890 ISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSMLSVSRNVLDTSFNEL 949
+SH+ FADD ILFA A++ + I +L + +ASGQ ++L+KS + S NV +
Sbjct: 539 LSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLI 598
Query: 950 KQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKS 1009
+ G+ + KYLG+P + + + F V +RV +L GWK + LS AGR L K+
Sbjct: 599 SEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKA 658
Query: 1010 VAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGF 1069
V +IP +VMS +LP S LD F W ++ H + W +C+ K +GG+G
Sbjct: 659 VLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGL 718
Query: 1070 RDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRS- 1128
R + N +LV K WR+ ++L A++ + Y + +P W+S RS
Sbjct: 719 RSARDMNKALVAKVGWRLLQDKESLWARVVRKKY--KVGGVQDTSWLKPQPRWSSTWRSV 776
Query: 1129 ----KLIFDKGARWRIGDGKKVQVWRDNWLPGGAPLLFREDLVAEWGIHLVSDLIVQPHG 1184
+ + KG W GDG ++ W D WL + D++ E V+ P
Sbjct: 777 AVGLREVVVKGVGWVPGDGCTIRFWLDRWLLQEPLVELGTDMIPEGERIKVAADYWLPGS 836
Query: 1185 GWNVPLLEMVFAPATVQRILAVPVPLFRGD-DCLFWPWTVNGMYSSKSGYQLLQSLTQEG 1243
GWN+ +L + +R+L+V V +F G+ D + W T +G ++ +S Y LLQ
Sbjct: 837 GWNLEILGLYLPETVKRRLLSVVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQG----D 892
Query: 1244 VSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGMDVDDRCPLCG 1303
V + G S + + W+ R + W + ++ V R + + C +C
Sbjct: 893 VGDRPNMG----SFFNRIWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCN 948
Query: 1304 CEEETNDHVFVCCPAVQPLW-FASPLAIRVASFS-SLHELAVAFLSTAEEDFIPVFQAWL 1361
EET HV CPA++P+W PL FS SL E + + + +F +
Sbjct: 949 GAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMDPVKGIWPTLFGMGI 1008
Query: 1362 YTLWEARNALIFNNKPVSMESLLQRLSTLLEMPTLVYAPVGR----AQRDMASSWSRPQR 1417
+ W+ R +F + + + L E+ + VG + + W P
Sbjct: 1009 WWAWKWRCCDVFGERKICRDRLKFIKDMAEEVRRVHVGAVGNRPNGVRVERMIRWQVPSD 1068
Query: 1418 GTTKVNVDAS 1427
G K+ D +
Sbjct: 1069 GWVKITTDGA 1078
Score = 141 bits (356), Expect = 2e-33
Identities = 108/398 (27%), Positives = 162/398 (40%), Gaps = 59/398 (14%)
Query: 488 MHMLAVYGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHM 547
MH++ VY P + W +K + G + P L GDFN IL +++GG+
Sbjct: 1 MHLIVVYAAPSVSRRSGLWGELKDVV-NGLEGPLLIGGDFNTILWVDERMGGNGRLSPDS 59
Query: 548 QEVMATCSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLP 607
+ L D+G G +FTW R V +RLD W V+HLP
Sbjct: 60 LAFGDWINELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLP 119
Query: 608 RYRSDHNPLLICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEGSAMGLTAKL 667
SDH PL + RK
Sbjct: 120 FMASDHAPLYVQLEPLQQRK---------------------------------------- 139
Query: 668 SSLGSSLKDWGREKFGDI----PKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLL 723
L+ W RE FGDI K ++D K + Q L S+ ++ + + +D +L
Sbjct: 140 ------LRKWNREVFGDIHVRKEKLVADIKEV-QDLLGVVLSDDLLAKEEVLLKEMDLVL 192
Query: 724 MQQEIWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVL 783
Q+E W Q+SR ++ GD+NT FFH RR+RN IE ++ D R D + +
Sbjct: 193 EQEETLWFQKSREKYIELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMA 252
Query: 784 GDYFTSLFTSSSPSGMQDAANLVAN----RVTAAHLEVLSEPFTKLDVEEALFQMHPTKA 839
Y+ L+ S + + N++ ++ A L + FTK +V A+ M KA
Sbjct: 253 LTYYKRLY---SLEDVSEVRNMLPTGGFASISEAEKAALLQAFTKAEVVSAVKSMGRFKA 309
Query: 840 PGLDGFPALFYQRHWDIIGDDVAHFCLQVLNGTASPGS 877
PG DG+ +FYQ+ W+ +G V F L+ P S
Sbjct: 310 PGPDGYQPVFYQQCWETVGPSVTRFVLEFFETGVLPAS 347
>At4g29090 putative protein
Length = 575
Score = 215 bits (548), Expect = 1e-55
Identities = 129/437 (29%), Positives = 223/437 (50%), Gaps = 23/437 (5%)
Query: 1013 AIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDF 1072
A+P+Y M+CF+LP ++C ++ ++A F+W +G+HW W L +K +GG+GF+D
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 1073 KAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIF 1132
+AFNL+L+GK WR+ S+P++L+A++FK+ YF ++D +A G RPS+ W SI S+ I
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 1133 DKGARWRIGDGKKVQVWRDNWL---PGGAPLLFR----EDLVAEWGIHLVSDLIVQPHGG 1185
+GAR +G+G+ + +WR WL P A L + ++ + I VSDLI +
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 1186 WNVPLLEMVFAPATVQRILAVPVPLFRGD-DCLFWPWTVNGMYSSKSGYQLL-QSLTQEG 1243
W ++EM+F P ++++ P R D W +T +G Y+ KSGY +L Q + +
Sbjct: 182 WRKDVIEMLF-PEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRS 240
Query: 1244 VSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGMDVDDRCPLCG 1303
S +L+P +++K W+S+ P+ + W+ + LPV +L R + + C C
Sbjct: 241 SPQEVSEPSLNP-IYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCP 299
Query: 1304 CEEETNDHVFVCCPAVQPLWFASPLAIRVAS------FSSLHELAVAFLSTAEEDFIPVF 1357
+ET +H+ C + W S + I + + +L+ + + +
Sbjct: 300 SCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQL 359
Query: 1358 QAW-LYTLWEARNALIFNNKPVSMESLLQRLSTLLE-----MPTLVYAPVGRAQRDMASS 1411
W L+ LW+ RN L+F + + + +L+R LE + R
Sbjct: 360 VPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGR 419
Query: 1412 WSRPQRGTTKVNVDASF 1428
W P K N DA++
Sbjct: 420 WRPPPHQWVKCNTDATW 436
>At2g11240 pseudogene
Length = 1044
Score = 211 bits (537), Expect = 2e-54
Identities = 115/338 (34%), Positives = 174/338 (51%), Gaps = 8/338 (2%)
Query: 858 GDDVAHF----CLQVLNGTASP----GSLHGIKVAQKAPVISHLLFADDNILFARATINE 909
GD ++ F C +VL+G GSL G++V++ P ++HLLFADD I F R+ +
Sbjct: 462 GDPLSPFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDTIFFCRSDLKS 521
Query: 910 AACISDILSTYEKASGQVINLDKSMLSVSRNVLDTSFNELKQLLGVKAVESFDKYLGLPT 969
IL YE+ASGQ+IN KS ++ SR D E +Q+LG++ V KYLGLP
Sbjct: 522 CKTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGKYLGLPK 581
Query: 970 IIGKSKSQIFNFVKDRVWKKLKGWKEKFLSRAGREVLIKSVAQAIPSYVMSCFVLPDSLC 1029
+ G+ K +FN + DR+ ++ W +FLS AG+ ++KSV ++P+Y MSCF L SLC
Sbjct: 582 MFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFKLLVSLC 641
Query: 1030 AELDGMIAKFFWAGDASRRGIHWVKWSTLCRHKHDGGLGFRDFKAFNLSLVGKNWWRIYS 1089
+ + F+W A ++ + W+ WS + ++K +GGLGF+D FN +L+ K WRI
Sbjct: 642 KRIQSALTHFWWDSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFNDALLAKLSWRIVQ 701
Query: 1090 QPDTLLAQIFKAAYFPRTDLWDAKKGYRPSYAWASILRSKLIFDKGARWRIGDGKKVQVW 1149
P +L +I Y + D S+ W I K + IG G VW
Sbjct: 702 SPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVW 761
Query: 1150 RDNWLPGGAPLLFREDLVAEWGIHLVSDLIVQPHGGWN 1187
+ WL + ++ V+ LI Q W+
Sbjct: 762 NEPWLSLSTSSTPMGPALEQFKSMTVAQLICQTTKSWD 799
Score = 126 bits (316), Expect = 1e-28
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 15/305 (4%)
Query: 557 CDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDHNPL 616
CDL+D+ SG +W KR V RLD AL+N AW +P + +L SDH PL
Sbjct: 4 CDLYDLRHSGNFLSWRGKRH-DHVVHCRLDRALSNGAWAEDYPASRCIYLCFEGSDHRPL 62
Query: 617 LICCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEGSAMGLTAKLSSLGSSLKD 676
L +K+ +FR++ +E LV EAW + K+S +
Sbjct: 63 LTHFDLSKKKKK----GVFRYDRRLKNNDEVTALVQEAWNLYDTDIVEEKISRCRLEIVK 118
Query: 677 WGREKFGDIPKKISDTKALLQKLQWQTQSEQVVRETKEAEIALDTLLMQQEIWWSQRSRA 736
W R K K I + + L++ Q + T + L +E +W QRSR
Sbjct: 119 WSRAKQQSSQKLIEENRQKLEEAMSSQDHNQELLSTINTNLLL--AYKAEEEYWKQRSRQ 176
Query: 737 NWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYFTSLFTSSSP 796
WL GDKN+ +FH R N I + G ++ I V+ +YF LF+++
Sbjct: 177 LWLALGDKNSGYFHAITRGRTVINKFSVIEKEDGVPEYEEAGILNVISEYFQKLFSANEG 236
Query: 797 SGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFPALFYQRHWDI 856
+ A + A +S +++ A F +H KAPG DGF A F+Q +W
Sbjct: 237 AR--------AATIKEAIKPFISPEQNPEEIKSACFSIHADKAPGPDGFSASFFQSNWMT 288
Query: 857 IGDDV 861
+G ++
Sbjct: 289 VGPNI 293
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 193 bits (491), Expect = 5e-49
Identities = 151/565 (26%), Positives = 253/565 (44%), Gaps = 30/565 (5%)
Query: 881 IKVAQKAPVISHLLFADDNILFARATINEAACISDILSTYEKASGQVINLDKSMLSVSRN 940
IK++Q P +SH+ FADD ILFA A+I++ + +L + ASGQ ++L+KS + S+N
Sbjct: 1206 IKISQSGPRLSHICFADDLILFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKN 1265
Query: 941 VLDTSFNELKQLLGVKAVESFDKYLGLPTIIGKSKSQIFNFVKDRVWKKLKGWKEKFLSR 1000
VL + + G+KA + KYLG+P + + + F V R +L GWK + LS
Sbjct: 1266 VLRDLGKRISEESGMKATKDLGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSF 1325
Query: 1001 AGREVLIKSVAQAIPSYVMSCFVLPDSLCAELDGMIAKFFWAGDASRRGIHWVKWSTLCR 1060
AGR L K+V +I + MS LP S LD + F W ++ H V W+ +C
Sbjct: 1326 AGRLTLTKAVLTSILVHTMSTIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHLVAWTRVCL 1385
Query: 1061 HKHDGGLGFRDFKAFNLSLVGKNWWRIYSQPDTLLAQIFKAAYFPRTDLWDAKKGYRPSY 1120
+ +GGLG R A N +L+ K WR+ + +L AQ+ ++ Y D+ D S
Sbjct: 1386 PRREGGLGIRSATAMNKALIAKVGWRVLNDGSSLWAQVVRSKY-KVGDVHDRNWTVAKS- 1443
Query: 1121 AWASILRS-----KLIFDKGARWRIGDGKKVQVWRDNWLPGGAPLLFREDLVAEWGIHLV 1175
W+S RS + + + W IGDG++++ W D WL P+ + L
Sbjct: 1444 NWSSTWRSVGVGLRDVIWREQHWVIGDGRQIRFWTDRWL-SETPIADDSIVPLSLAQMLC 1502
Query: 1176 SDLIVQPHG-GWNVPLLEMVFAPATVQRILAVPVPLFRG-DDCLFWPWTVNGMYSSKSGY 1233
+ + G GW++ + +LAV V G D L W T +G ++ KS +
Sbjct: 1503 TARDLWRDGTGWDMSQIAPFVTDNKRLDLLAVIVDSVTGAHDRLAWGMTSDGRFTVKSAF 1562
Query: 1234 QLLQSLTQEGVSSSSSGGNLHPSLWKKFWRSEALPRCKELAWRAIKGILPVRVSLRIRGM 1293
+L ++ S SL+ + W+ +A R + W + + + R +
Sbjct: 1563 AML--------TNDDSPRQDMSSLYGRVWKVQAPERVRVFLWLVVNQAIMTNSERKRRHL 1614
Query: 1294 DVDDRCPLCGCEEETNDHVFVCCPAVQPLWFASPLAIRVASFSSLHELAVAF------LS 1347
D C +C E+ HV CPA+ +W SF ++ L + L
Sbjct: 1615 CDSDVCQVCRGGIESILHVLRDCPAMSGIWDRIVPRRLQQSFFTMSLLEWLYSNLRQGLM 1674
Query: 1348 TAEEDFIPVFQAWLYTLWEARNALIFNNKPVSMESLLQRLSTLLEMPTLVYA-----PVG 1402
T D+ +F ++ W+ R + IF + ++ + L ++ Y+ +
Sbjct: 1675 TEGSDWSTMFAMAVWWGWKWRCSNIFGENKTCRDR-VRFIKDLAVEVSIAYSREVELRLS 1733
Query: 1403 RAQRDMASSWSRPQRGTTKVNVDAS 1427
+ + W+ P G K+N D +
Sbjct: 1734 GLRVNKPIRWTPPMEGWYKINTDGA 1758
Score = 172 bits (436), Expect = 1e-42
Identities = 130/464 (28%), Positives = 207/464 (44%), Gaps = 52/464 (11%)
Query: 435 GLPNVFPVQCAGSGRSRAGGLFLMWSSEV-EVDILSASLNHIAFSLVHPDHHDPMHMLAV 493
G N F V G +GGL+L+W + + EV ++ ++ I V+ D ++++ V
Sbjct: 617 GFENSFRVDAVG----HSGGLWLLWRTGIGEVSVVDSTDQFIHAKDVNGK--DNVNLVVV 670
Query: 494 YGFPEEQNKVRTWQLVKSLCPQGRDVPWLCFGDFNDILSPTDKLGGDPPNYAHMQEVMAT 553
Y P + W + + + D P + GDFN I+ ++ GG+ +
Sbjct: 671 YAAPTASRRSGLWDRLGDVI-RSMDGPVVIGGDFNTIVRLDERSGGNGRLSSDSLAFGEW 729
Query: 554 CSTCDLHDVGVSGYRFTWSNKRAVPGTVEERLDYALANDAWDALWPVTEVTHLPRYRSDH 613
+ L D+G G +FTW R V +RLD L W V HLP SDH
Sbjct: 730 INDHSLIDLGFKGNKFTWKRGREERFFVAKRLDRVLCCAHARLKWQEASVLHLPFLASDH 789
Query: 614 NPLLI-----CCGSRGMRKELQRTSMFRFEELWLQEEECKELVTEAWGEGSAMGLTAKLS 668
PL + G+RG R FRFE WL KEL+ +W
Sbjct: 790 APLYVQLTPEVSGNRGRRP-------FRFEAAWLSHPGFKELLLTSWN------------ 830
Query: 669 SLGSSLKDWGREKFGDIPKKISDTKAL-LQKLQWQTQSEQVVRETKEAEIALDTLLMQQE 727
K IS +AL +Q+L QS+ ++++ +E D +L Q+E
Sbjct: 831 ------------------KDISTPEALKVQELLDLHQSDDLLKKEEELLKDFDVVLEQEE 872
Query: 728 IWWSQRSRANWLRFGDKNTNFFHQKATQRRKRNMIEKIRDDGGREFVDDPNIGRVLGDYF 787
+ W Q+SR W GD+NT FFH RR+RN IE ++D+ GR + + DY+
Sbjct: 873 VVWMQKSREKWFVHGDRNTKFFHTSTIIRRRRNQIEMLQDNDGRWLSNAQELETHAIDYY 932
Query: 788 TSLFT-SSSPSGMQDAANLVANRVTAAHLEVLSEPFTKLDVEEALFQMHPTKAPGLDGFP 846
L++ + ++ ++ A L++PF+ L+VE A+ M KAPG DGF
Sbjct: 933 KRLYSLDDLDAVVEQLPQEGFTALSEADFSSLTKPFSPLEVEGAIRSMGKYKAPGPDGFQ 992
Query: 847 ALFYQRHWDIIGDDVAHFCLQVLNGTASPGSLHGIKVAQKAPVI 890
+FYQ+ W+++G+ V F + + + P + + V A V+
Sbjct: 993 PVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVL 1036
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.334 0.146 0.511
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,859,742
Number of Sequences: 26719
Number of extensions: 1521367
Number of successful extensions: 7802
Number of sequences better than 10.0: 153
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 5538
Number of HSP's gapped (non-prelim): 725
length of query: 1449
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1337
effective length of database: 8,326,068
effective search space: 11131952916
effective search space used: 11131952916
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0316.6