BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0314.20
(396 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23880 unknown protein 127 1e-29
At3g06240 unknown protein 122 3e-28
At3g07870 unknown protein 91 8e-19
At4g12560 putative protein 82 7e-16
At1g33530 hypothetical protein 80 2e-15
At4g22390 unknown protein 71 1e-12
At1g09650 hypothetical protein 63 3e-10
At5g10340 putative protein 62 4e-10
At4g38870 putative protein 62 4e-10
At3g17560 hypothetical protein 58 8e-09
At1g71320 hypothetical protein 57 2e-08
At1g51290 hypothetical protein 56 3e-08
At2g13131 F-box protein family 55 7e-08
At4g21240 putative protein 54 1e-07
At3g44120 putative protein 54 2e-07
At3g17270 hypothetical protein 52 4e-07
At2g07140 pseudogene 52 4e-07
At1g51320 hypothetical protein 52 4e-07
At3g62380 putative protein 51 1e-06
At1g58090 hypothetical protein 50 2e-06
>At3g23880 unknown protein
Length = 364
Score = 127 bits (318), Expect = 1e-29
Identities = 117/407 (28%), Positives = 184/407 (44%), Gaps = 65/407 (15%)
Query: 1 MRQPHSRLPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDH-YRTSFSSV 59
M PH+ LP E++ EIL R+PV S+ FKCVC SW++LIS+ FA H S
Sbjct: 8 MFSPHN----LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKA 63
Query: 60 TSMTHQRLASLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLE-NPLAPLE 118
T+ T ++P+ +T+ R L SC + SL + + E
Sbjct: 64 TTST-----------KSPYGVITT-------------SRYHLKSCCIHSLYNASTVYVSE 99
Query: 119 TCRFNVQTKWVHILGSCNGLLCL-ADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVR 177
+ + ++G+C+GL+C D L NP +L + S DL+
Sbjct: 100 HDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYLWNPTIKLQQRLSSS--------DLETS 151
Query: 178 DD-VITQYGFGYDQVNNKYKVLI----TYGFPRVTKLYTFGTKSWTTIQNFPCDHQVPWR 232
DD + YGFGYD+ + YKV+ + TK+Y+ K W + +FP V +
Sbjct: 152 DDECVVTYGFGYDESEDDYKVVALLQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADK 211
Query: 233 WWDKQGKFVSGSLNWWVPERNG---IISFDLEKETYGEVLLPLHMGGDHPFNHVLEVLSN 289
+ G +++G+LNW + IIS+D+ ++ + E+ P+ G F L L
Sbjct: 212 --SRSGIYINGTLNWAATSSSSSWTIISYDMSRDEFKELPGPVCCGRG-CFTMTLGDLRG 268
Query: 290 RLCL-CYFNDIHCVVWLIKKYGNQQSWKKLMLIPHSKLNMAMPMPIHASCCLRPLCISEN 348
L + CY + VW++K++G SW KL+ IP + +RPL IS+
Sbjct: 269 CLSMVCYCKGANADVWVMKEFGEVYSWSKLLSIP------------GLTDFVRPLWISD- 315
Query: 349 GIVFMRTIDLQLVSYNTKNGSSDDPEINMGRYRRDDMHIYHESLISP 395
G+V + L YN NG P N R D +Y ++++SP
Sbjct: 316 GLVVLLEFRSGLALYNCSNGRFHYPVSNSISGCR-DAKVYLKTMVSP 361
>At3g06240 unknown protein
Length = 427
Score = 122 bits (307), Expect = 3e-28
Identities = 118/423 (27%), Positives = 184/423 (42%), Gaps = 76/423 (17%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDH------------------- 51
LP E+I EIL R+P S+ F+CV K + TL SDP FAK H
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95
Query: 52 -----YRTSFSSVTSMTHQRLASLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYV 106
Y F+S+ A Y S+ S + V YDDR+ +
Sbjct: 96 SSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLKLNA 155
Query: 107 QSLLENPLAPLETCRFNVQTKWVHILGSCNGLLCLADRSCLFRLMNPFTRLASKRSPPLD 166
+S N WV I+GS NGL+C++ L NP T SKR P
Sbjct: 156 KSYRRN---------------WVEIVGSSNGLVCISPGEGAVFLYNPTTG-DSKRLPE-- 197
Query: 167 VRSPPVDLDVRDDVITQYGFGYDQVNNKY---KVLITYGFPRVTKLYTFGTKSWTTIQNF 223
P ++ D YGFG+D + + Y K++ T +Y+ SW I N
Sbjct: 198 -NFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNL 256
Query: 224 PCDHQVPWRWWDKQGKFVSGSLNWWVPE----RNGIISFDLEKETYGEVLLPLHMGG-DH 278
+H G +G+++W E + +++FD++ E + E+ +P H
Sbjct: 257 NYEHN---DGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSH 313
Query: 279 PF-NHVLEVLSNRLCL---CYFNDIHCVVWLIKKYGNQQSWKKLMLIPHSKLNMAMPMPI 334
F N V+ L+ RLC+ CY D+H +W++ +YG +SW ++ ++N+ +
Sbjct: 314 RFSNFVVGSLNGRLCVVNSCY--DVHDDIWVMSEYGEAKSWSRI------RINL-----L 360
Query: 335 HASCCLRPLCISENGIVFMRTIDLQLVSYNTKNGSSDDPEINMGRYRRD--DMHIYHESL 392
+ S ++PLC ++N + +D LV YN + +S + I G D + + Y ESL
Sbjct: 361 YRS--MKPLCSTKNDEEVLLELDGDLVLYNFETNASSNLGI-CGVKLSDGFEANTYVESL 417
Query: 393 ISP 395
ISP
Sbjct: 418 ISP 420
>At3g07870 unknown protein
Length = 417
Score = 91.3 bits (225), Expect = 8e-19
Identities = 110/403 (27%), Positives = 169/403 (41%), Gaps = 83/403 (20%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASL 70
LP+++I +I R+P+SS+ VC+SW+++++ H R S SS S + L
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQ------HGRLSSSS--SSPTKPCLLL 79
Query: 71 GCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKWVH 130
C +P + L F L ++++ T + T RF
Sbjct: 80 HC--DSPIRN--GLHFLDLSE----EEKRIKTKKF-------------TLRFASSMPEFD 118
Query: 131 ILGSCNGLLCLADR--SCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQYGFGY 188
++GSCNGLLCL+D + L NPFT + + P D + +GFG+
Sbjct: 119 VVGSCNGLLCLSDSLYNDSLYLYNPFTTNS--------LELPECSNKYHDQELV-FGFGF 169
Query: 189 DQVNNKYKVL--------------ITYGFPRVTKLYTFGTKSWTTIQNFPCDHQVPWRWW 234
++ +YKVL I G R+ Y T+ + D + WR
Sbjct: 170 HEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQ--YKQSEVQILTLSSKTTDQSLSWRSL 227
Query: 235 DK---------QGKFVSGSLNW------WVPERNGIISFDLEKETYGEVLLPLHMGGDHP 279
K V+G L++ VP+R +SFDLE E + E+ P GG +
Sbjct: 228 GKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDRK-FVSFDLEDEEFKEIPKP-DCGGLNR 285
Query: 280 FNHVLEVLSNRLC-LCYFNDIHCVVWLIKKYGNQQSWKK-----LMLIPHSKLNMAMPMP 333
NH L L LC + Y N +W++K YG ++SW K L K N+ PM
Sbjct: 286 TNHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMW 345
Query: 334 IHASC----CLRPLCISENGIVFMRTIDLQLVSYNTKNGSSDD 372
I + +R LC+ ENG + + LV+Y+ K G D
Sbjct: 346 IWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKD 388
>At4g12560 putative protein
Length = 408
Score = 81.6 bits (200), Expect = 7e-16
Identities = 87/371 (23%), Positives = 148/371 (39%), Gaps = 84/371 (22%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASL 70
+P +++ +I R+P +++ + + K LI+DP F + H R+
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLH------------RVLQT 51
Query: 71 GCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPL---APLETCRFNVQTK 127
G + L L SL D +E+P+ P E
Sbjct: 52 GDHLMILLRGALRLYSVDLDSLDSVSD------------VEHPMKRGGPTE--------- 90
Query: 128 WVHILGSCNGLLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQ---- 183
+ GS NGL+ L++ + NP TR R PP +D+ D T+
Sbjct: 91 ---VFGSSNGLIGLSNSPTDLAVFNPSTRQIH--------RLPPSSIDLPDGSSTRGYVF 139
Query: 184 YGFGYDQVNNKYKVL------------ITYGFPRVTKLYTFGTKSWTTIQNFPCDHQVPW 231
YG GYD V++ YKV+ + FP K+++ SW I++ Q+ +
Sbjct: 140 YGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLF 199
Query: 232 RWWDK------QGKFVSGSLNWWVPERNGIISF------DLEKETYGEVLLPLHMG-GDH 278
++ G SL+W +P R G+I+F DL E + V P + G+
Sbjct: 200 YFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNV 259
Query: 279 PFNHVLEVLSNRLCL-CYFNDIHCVVWLIKKYGNQQSWKKLMLIPHSKLNMAMPMPIHAS 337
+ VL LCL C ++ + VW++K+Y + SW K+ + P + +
Sbjct: 260 DIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTV-------QKPKSVKSF 312
Query: 338 CCLRPLCISEN 348
+RPL S++
Sbjct: 313 SYMRPLVYSKD 323
>At1g33530 hypothetical protein
Length = 441
Score = 80.1 bits (196), Expect = 2e-15
Identities = 75/316 (23%), Positives = 127/316 (39%), Gaps = 55/316 (17%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASL 70
LPD L+ EIL R+PV ++ K + K WK+LI A+ H R
Sbjct: 97 LPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKK------------ 144
Query: 71 GCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKWVH 130
Y + + + + F+ R + + S +
Sbjct: 145 --YGLKEIKITVERSTSKSICIKFFSRRSGMNAINSDS-----------------DDLLR 185
Query: 131 ILGSCNGLLCLADRSCLF-RLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQYGFGYD 189
+ GSCNGL+C+ + ++ L+NP T + +PP + GFG D
Sbjct: 186 VPGSCNGLVCVYELDSVYIYLLNPMTGVTRTLTPPRGTK-------------LSVGFGID 232
Query: 190 QVNNKYKVLITYGFPRV-TKLYTFGTKSWTTIQNFPCDHQVPWRWW---DKQGKFVSGSL 245
V YKV++ YGF RV T ++ T W Q + +P ++ FV+GSL
Sbjct: 233 VVTGTYKVMVLYGFDRVGTVVFDLDTNKWR--QRYKTAGPMPLSCIPTPERNPVFVNGSL 290
Query: 246 NWWV-PERNGIISFDLEKETYGEVLLPLHMGG-DHPFNHV-LEVLSNRLCLCYFND-IHC 301
W + + + I+ DL E + + P M D ++ + L +RLC+ +H
Sbjct: 291 FWLLASDFSEILVMDLHTEKFRTLSQPNDMDDVDVSSGYIYMWSLEDRLCVSNVRQGLHS 350
Query: 302 VVWLIKKYGNQQSWKK 317
VW++ + + W++
Sbjct: 351 YVWVLVQDELSEKWER 366
>At4g22390 unknown protein
Length = 401
Score = 70.9 bits (172), Expect = 1e-12
Identities = 86/366 (23%), Positives = 148/366 (39%), Gaps = 80/366 (21%)
Query: 12 PDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASLG 71
P +LI E+ R+ ++++ + + K +LI P+F H R T + L L
Sbjct: 5 PTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLE-----TGEHLMIL- 58
Query: 72 CYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKWVHI 131
L +L+ D ++++ PL+ F +
Sbjct: 59 ------------LRGPRLLRTVELDSPENVSDIP---------HPLQAGGFT------EV 91
Query: 132 LGSCNGLLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQ----YGFG 187
GS NG++ L + + NP TR + P++ P+D RD IT+ YG G
Sbjct: 92 FGSFNGVIGLCNSPVDLAIFNPSTRKIHRL--PIE----PIDFPERD--ITREYVFYGLG 143
Query: 188 YDQVNNKYKVLIT-----------YGFPRVTKLYTFGTKSWTTIQNFPCDHQVPWRWWDK 236
YD V + +KV+ + P K+++ SW + + Q+ W +
Sbjct: 144 YDSVGDDFKVVRIVQCKLKEGKKKFPCPVEVKVFSLKKNSWKRVC-LMFEFQILWISYYY 202
Query: 237 Q-------GKFVSGSLNWWVPERNGIISF------DLEKETYGEVLLPLHMGGDHPFNHV 283
G V+ L+W +P R G+I+F DL + G + P + + N
Sbjct: 203 HLLPRRGYGVVVNNHLHWILPRRQGVIAFNAIIKYDLASDDIGVLSFPQELYIED--NMD 260
Query: 284 LEVLSNRLCL-CYFNDIHCVVWLIKKYGNQQSWKKLMLIPHSKLNMAMPMPIHASCCLRP 342
+ VL +CL CY H VW++K+Y + +SW KL +P P + + +RP
Sbjct: 261 IGVLDGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRVP-------KPESVESVEFIRP 313
Query: 343 LCISEN 348
L S++
Sbjct: 314 LICSKD 319
>At1g09650 hypothetical protein
Length = 382
Score = 62.8 bits (151), Expect = 3e-10
Identities = 84/328 (25%), Positives = 135/328 (40%), Gaps = 52/328 (15%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHY--RTSFSSVTSMTHQRLA 68
LP E++ IL R+ ++ FK V K WK+ I P F + + R + + R A
Sbjct: 13 LPHEVVECILERLDADPLLRFKAVSKQWKSTIESPFFQRRQFTQRQQSGNPDVLMVSRCA 72
Query: 69 SLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKW 128
+ S + +LT L S +S + + E E ++V
Sbjct: 73 DIN-------SEIEALTTLVL---------GSSSSVKIPTPWEEEEE--EDKEYSVSQD- 113
Query: 129 VHILGSCNGLLCLADRSCLFRLMNPFTR------LASKRSPPLDVRSPPVDLDVRDDVIT 182
SC+GL+CL D+ + NP TR L + + + DL R ++
Sbjct: 114 -----SCDGLVCLFDKFKSGFVFNPATRWYHPLPLCQLQQLLIAIGDGFYDLGYR---VS 165
Query: 183 QYGFGYDQVNNKYKVLITY-----GFPRVT--KLYTFGTKSWTTIQNFPCDHQVPWRWWD 235
+ GFG D++ YK + Y G T +++ F T +W + P+R
Sbjct: 166 RLGFGKDKLTGTYKPVWLYNSIEIGLENATTCEVFDFSTNAWRYV-----SPAAPYRIVG 220
Query: 236 KQGKF-VSGSLNWWVP-ERNGIISFDLEKETYGEVLLPLHMGGDHPFNHVLEVLSNRLCL 293
V GSL+W+ E I+SFDL ET+ +V+ F+ V+ L NRLC+
Sbjct: 221 CPAPVCVDGSLHWFTECEETKILSFDLHTETF-QVVSKAPFANVDGFDIVMCNLDNRLCV 279
Query: 294 CYFNDIHCVVWLIKKYGNQQSWKKLMLI 321
+ V+W GN ++W K+ I
Sbjct: 280 SEMKLPNQVIWSFNS-GN-KTWHKMCSI 305
>At5g10340 putative protein
Length = 445
Score = 62.4 bits (150), Expect = 4e-10
Identities = 78/334 (23%), Positives = 138/334 (40%), Gaps = 51/334 (15%)
Query: 11 LPDELI-FEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLAS 69
LP ++I + I+ R+ V +++ FK V K W + I P F + S + H L S
Sbjct: 69 LPHDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSPSFQERQLIHHLSQSSGDPHVLLVS 128
Query: 70 LGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKWV 129
L YD QQ S++ ++ ++ L+E+ A ++ + T W
Sbjct: 129 L--YD--------PCARQQDPSISSFEALRTF-------LVESSAASVQ-----IPTPWE 166
Query: 130 HIL-----GSCNGLLCLADRSCLFRL-MNPFTRLASKRSPPLDVRSPPVDLDVRDD---- 179
L SC+GL+CL L + +NP TR + P + + D R +
Sbjct: 167 DKLYFVCNTSCDGLICLFSFYELPSIVVNPTTRW-HRTFPKCNYQLVAADKGERHECFKV 225
Query: 180 VITQYGFGYDQVNNKYKVLITYGF--------PRVTKLYTFGTKSWTTIQNFPCDHQVPW 231
GFG D+++ YK + Y P +++ F T +W + FP +
Sbjct: 226 ACPTPGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFDFATNAWRYV--FPASPHLIL 283
Query: 232 RWWDKQGKFVSGSLNWWV----PERNGIISFDLEKETYGEVLLPLHMGGDHPFNHVLEVL 287
D +V GSL+W+ ++S DL ET+ + + + V+ L
Sbjct: 284 HTQDP--VYVDGSLHWFTALSHEGETMVLSLDLHSETFQVISKAPFLNVSDEYYIVMCNL 341
Query: 288 SNRLCLCYFNDIHCVVWLIKKYGNQQSWKKLMLI 321
+RLC+ + V+W + + ++WK++ I
Sbjct: 342 GDRLCVSEQKWPNQVIWSLDD-SDHKTWKQIYSI 374
>At4g38870 putative protein
Length = 426
Score = 62.4 bits (150), Expect = 4e-10
Identities = 82/336 (24%), Positives = 136/336 (40%), Gaps = 66/336 (19%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQ-RLAS 69
LP +LI EIL ++ + ++ F CV K W ++I DP F K S S+ R S
Sbjct: 53 LPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRPKSLVFVFRAQS 112
Query: 70 LGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLT---SCYVQSLLENPLAPLETCRFNVQT 126
LG + FSSV + +++ S + S+T +CY Q +
Sbjct: 113 LG----SIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMT--------------- 153
Query: 127 KWVHILGSCNGLLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQYGF 186
I S +GL+C S L + NP TR + + P + R I QY
Sbjct: 154 ----ISPSVHGLICYGPPSSLV-IYNPCTRRS--------ITLPKIKAGRR--AINQY-I 197
Query: 187 GYDQVNNKYKVL-ITYGFPRV---------TKLYTFGTK--SWTTIQNF-----PCDHQV 229
GYD ++ YKV+ IT G P + ++ T GT+ SW I + P ++
Sbjct: 198 GYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEEL 257
Query: 230 PWRWWDKQGKFVSGSLNWWVPERNGIISFDLEKETYGEVLLPLHMGGDHPFNHVLEVLSN 289
F+ LN + I+SFD+ E + + +P + F+ + +
Sbjct: 258 CINGVLYYRAFIGTKLN-----ESAIMSFDVRSEKFDLIKVPCNF---RSFSKLAKYEGK 309
Query: 290 RLCLCYFNDIHCVV--WLIKKYGNQQSWKKLMLIPH 323
+ Y ++ W+++ N + KK +P+
Sbjct: 310 LAVIFYEKKTSGIIGLWILEDASNGEWSKKTFALPN 345
>At3g17560 hypothetical protein
Length = 413
Score = 58.2 bits (139), Expect = 8e-09
Identities = 88/357 (24%), Positives = 144/357 (39%), Gaps = 69/357 (19%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTS-------------FS 57
LP ++I EI +VPV+ + + CK L+ D F + H+ S F
Sbjct: 15 LPQDVIEEIFSKVPVTCLRRIRSTCKRLYALLKDRGFIRKHFAKSARQYHALMLKNFRFY 74
Query: 58 SVT---SMTHQRLASLGCYDRT---PFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLE 111
SV+ + T +ASL +R+ P+SS + ++S AF+ D L C + E
Sbjct: 75 SVSFNPNGTEMDVASLFNGERSLIDPYSS-----SEAIISQAFHCD--GLLLCTTK---E 124
Query: 112 NPLAPLETCRFNVQTKWV-----------HILGSCNGLLCLADRSCLF-RLMNPFTRLAS 159
N L L F+ QTKW+ ++LG N LC + + F L
Sbjct: 125 NRLVVLNP--FSGQTKWLQPQNRCKIDEAYVLGYDNSDLCHSYKILSFPDLYEQELETIK 182
Query: 160 KRSPPLDVRSPPVDLDVRDDVITQYGFGYDQVNNKYKVLITYGFPRVTKLYTFGTKSWTT 219
LDV +P DL+++ D + + + + +T K+Y F + SW
Sbjct: 183 NAGRDLDV-TPEGDLELKTDDFSSNSW-------RRNLGVTPHGGLGLKIYDFSSNSWKK 234
Query: 220 IQNFPCDHQVPWRWWDKQGKFVSGSLNW-WVPERNGI-----ISFDLEKETYGEVLLPLH 273
+ D P G + G+ W ++ +R G+ +SFD E++ + +P H
Sbjct: 235 L-----DVITPEGCLKSYGVSLKGNAYWVYMSKRRGVNDYSLLSFDFSTESFQHLCVPFH 289
Query: 274 MGGDHPFNHVLEVL-SNRLCLCY--FNDIHCVVWLIKKYGNQ-QSWKKLMLI---PH 323
D L V+ L L Y + +W+ K+ SWKK + + PH
Sbjct: 290 QEADCFGTMALSVVREEHLSLLYQSCETLKVEIWMTKEIDTTFVSWKKFLTVDLEPH 346
>At1g71320 hypothetical protein
Length = 392
Score = 57.0 bits (136), Expect = 2e-08
Identities = 76/348 (21%), Positives = 138/348 (38%), Gaps = 60/348 (17%)
Query: 10 WLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLAS 69
++PD++ I +P+ S+ FK + K W ++I F+ H+RL
Sbjct: 13 FIPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFS---------------HKRLIR 57
Query: 70 LGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKWV 129
G P ++ L Q + F ++ + + +++ + +T + Q K +
Sbjct: 58 TGL----PTPNMKFLHISQHFTANFVEEYSNSITFLLETFSRDDQNNRKTFDES-QNKTI 112
Query: 130 HILGSCNGLLCLA--DRSCLFRLMNPFTRLASKRSP-------------PLDVRSP---- 170
+LGSC+GL+ L D L+NP T+ K SP P P
Sbjct: 113 QVLGSCDGLVLLRIHDDFRSIYLINPTTKEHMKLSPEFMQWPFTLSYLTPAMANKPWRQL 172
Query: 171 ---PVDLDVRDDVITQY-GFGYDQVNNKYKVLITYGFPRV------TKLYTFGTKSWTTI 220
+D D+ + GFG D V YKV++ Y + K+ + +
Sbjct: 173 SQSVLDYDISVKRMPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEFKAKVLSLDNGEQRDV 232
Query: 221 QNFPCDHQVPWRWWDKQ-GKFVSGSLNWWVPERNG-----IISFDLEKETYGEVLLPLHM 274
+ H + + D+Q + +GSL W ++ +++ DL E + +LLP
Sbjct: 233 GFYDIHHCI---FCDEQTSVYANGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLP-EC 288
Query: 275 GGDHPFNHVLEVLSNRLCLC-YFNDIHCVVWLIKKYGNQQSWKKLMLI 321
+ N + L+ RLCL + VVW + + + W+K+ I
Sbjct: 289 DTKYATNIEMWNLNERLCLSDVLESSNLVVWSLHQEYPTEKWEKIYSI 336
>At1g51290 hypothetical protein
Length = 377
Score = 56.2 bits (134), Expect = 3e-08
Identities = 74/269 (27%), Positives = 102/269 (37%), Gaps = 67/269 (24%)
Query: 8 LPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRL 67
LPW EL+ EIL+RVP S+ F+ VCK W +L D +F DH S T ++
Sbjct: 6 LPW---ELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHLVRSRPQFMFRTDSKM 62
Query: 68 ASLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTK 127
S+ P+ V LT P C +
Sbjct: 63 YSVAVNFSGPWIEVHELTLD---------------------------IPGLNCEMPI--- 92
Query: 128 WVHILGSCNGLL-CLADRSCLFRLMNPF---TRL-ASKRSPPLDVRSPPVDLDVRDDVIT 182
W++ C+GLL C + + + NP+ TRL AS P T
Sbjct: 93 WLYNYVDCDGLLFCTSYKFKGVLIWNPWLKQTRLFASNHHYP-----------------T 135
Query: 183 QYGFGYDQVNNKYKVLITYGFPRVTKL--YTFGTKSWTTIQNFPCDHQVPWRWWDKQGKF 240
+Y GYD +YKVL Y F +KL Y G S +++ D W
Sbjct: 136 KYVIGYDN-KKRYKVL-DYEFEPSSKLTIYEIGLYS-KKVKDLESDSS--WSVVQSNSVS 190
Query: 241 VSGSLNW-WVPERNGI----ISFDLEKET 264
++G+L W V NGI SF E+ T
Sbjct: 191 LNGTLYWAGVDVNNGIFIRSFSFSTERLT 219
>At2g13131 F-box protein family
Length = 324
Score = 55.1 bits (131), Expect = 7e-08
Identities = 27/65 (41%), Positives = 38/65 (57%)
Query: 6 SRLPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQ 65
+++P LPD+L EIL R+P S+ K CK W L DP+FAK + S V + +Q
Sbjct: 7 TKIPNLPDDLESEILSRIPAKSLTKLKTTCKRWYVLFRDPKFAKKNLGKSAREVMLVMNQ 66
Query: 66 RLASL 70
RL S+
Sbjct: 67 RLHSI 71
>At4g21240 putative protein
Length = 417
Score = 54.3 bits (129), Expect = 1e-07
Identities = 79/340 (23%), Positives = 133/340 (38%), Gaps = 69/340 (20%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASL 70
+P ++I +IL R+P S + F+ V K W ++ + P F + +F S T RL +
Sbjct: 36 IPLDMIPDILLRLPAKSAVRFRIVSKLWLSITTRPYFIRSF---AFPSST-----RLCLM 87
Query: 71 GCYDRTPFSSVTSLTFQQLVSLAFYDDRK--SLTSCYVQSLLENPLAPLETCRFNVQTKW 128
C V + + +SL +DD + C ++S + P
Sbjct: 88 AC--------VKARDMRLFISLHQHDDGSYAHVDRCEIKSPKHDYYNPSSE--------- 130
Query: 129 VHILGSCNGLLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDVITQYGFGY 188
S NGL+C D + + NP R + + P VR + GY
Sbjct: 131 -----SVNGLVCFGDFYNIV-VWNPSMR------QHVTLPEPKPHSTVR--YFIRSCLGY 176
Query: 189 DQVNNKYKVLITYGFPRVTK---LYTFG-TKSWTTIQNFPCDHQVPWRWWDKQGKFVSGS 244
D V +KYKVL G+ ++T G +SW IQN P D +P + G ++G
Sbjct: 177 DPVEDKYKVLSISGYHNGNHDPLVFTLGPQESWRVIQNSPLDIPLP-TGGSRVGTCINGH 235
Query: 245 LNWWVPER----------NGIISFDLEKETYGEVLLPLHMGGDHPFNHVLEVLSNRLCLC 294
+ + R N ++SFD+ E + + P D + + +L
Sbjct: 236 VYYEAQIRFKVDDIFNFENILMSFDVRYEKFNTIKKP----ADPTLRNFMLNYQGKLA-W 290
Query: 295 YFNDIHCVVWLIKKYGNQQSWKKLMLIPHSKLNMAMPMPI 334
+ +D + + + G++Q W S N +P PI
Sbjct: 291 FCSDYSSIRFWVLDDGDKQEW--------SLKNFILPFPI 322
>At3g44120 putative protein
Length = 384
Score = 53.5 bits (127), Expect = 2e-07
Identities = 68/283 (24%), Positives = 111/283 (39%), Gaps = 62/283 (21%)
Query: 8 LPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLI-SDPQFAKDHYRTS---FSSVTSMT 63
LP LP +L+ EIL VP +S+ + CK W L D +FA+ H + F +T
Sbjct: 3 LPELPKDLVEEILCFVPATSLKRLRSSCKEWNRLFKDDKRFARKHIEKAAKQFQPLTLTK 62
Query: 64 HQRLA--SLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCR 121
+ R+ ++ + TP SL + VSL +P + +
Sbjct: 63 NYRICPINVNLHGTTP-----SLEVKNEVSLV------------------DPHSKNSAAQ 99
Query: 122 FNVQTKWVHILGSCNG-LLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDV 180
FN+ + C+G LLC + + F + NP T + ++L R +
Sbjct: 100 FNIDRVF-----HCDGLLLCTSQKDSRFVVWNPLTGVTKW-----------IELGDRYNE 143
Query: 181 ITQYGFGYD--QVNNKYKVLITYGFPRVTKLYTFGTKSWTTIQNFPCDHQVPWRWWD--K 236
+ GYD N YK + + +++Y F + SW I D P + D +
Sbjct: 144 GMAFILGYDNKSCNKSYKAMSFNYLDKDSEIYEFSSDSWRVID----DIIKPPHYMDYFR 199
Query: 237 QGKFVSGSLNWWVPERN--------GIISFDLEKETYGEVLLP 271
+ + G+ W +R +I FD E +G V LP
Sbjct: 200 ECFSLKGNTYWLGIDRRRRPPDLRITLIKFDFGTERFGYVSLP 242
>At3g17270 hypothetical protein
Length = 134
Score = 52.4 bits (124), Expect = 4e-07
Identities = 26/63 (41%), Positives = 36/63 (56%)
Query: 8 LPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRL 67
+P LPDEL EIL RVP S+ +K +CK W L DP+F K + S V + + R+
Sbjct: 4 IPNLPDELESEILSRVPAKSLAKWKTICKRWYALFRDPRFVKKNLCKSAREVMLLMNDRV 63
Query: 68 ASL 70
S+
Sbjct: 64 HSI 66
>At2g07140 pseudogene
Length = 384
Score = 52.4 bits (124), Expect = 4e-07
Identities = 79/345 (22%), Positives = 130/345 (36%), Gaps = 85/345 (24%)
Query: 8 LPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLI-SDPQFAKDHYRTS---FSSVTSMT 63
LP LP +L+ EIL VP +S+ + CK W L D +F + H + F +T
Sbjct: 3 LPELPKDLVEEILSFVPATSLKRLRSTCKGWNRLFKDDKRFTRIHTEKAAKQFQPLTLTK 62
Query: 64 HQRLA--SLGCYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCR 121
+ R+ ++ + TP SL + VSL +P + +
Sbjct: 63 NYRICPINVNLHGTTP-----SLEVKNEVSLL------------------DPHSKNSAAQ 99
Query: 122 FNVQTKWVHILGSCNG-LLCLADRSCLFRLMNPFTRLASKRSPPLDVRSPPVDLDVRDDV 180
FN+ + C+G LLC + + F + NP T + ++L R +
Sbjct: 100 FNIDRVF-----HCDGLLLCTSQKDSRFVVWNPLTGVTKW-----------IELGDRYNE 143
Query: 181 ITQYGFGYD--QVNNKYKVLITYGFPRVTKLYTFGTKSWTTIQNFPCDHQVPWRWWD--K 236
+ GYD N YK + + +++Y F + SW I D P + D +
Sbjct: 144 GMAFILGYDNKSCNKSYKAMSFNYLDKDSEIYEFSSDSWRVID----DIIKPPHYMDYFR 199
Query: 237 QGKFVSGSLNWWVPERN--------GIISFDLEKETYGEVLLP------------LHMGG 276
+ + G+ W +R +I FD E +G V LP L + G
Sbjct: 200 ECFSLKGNTYWLGIDRRRRPPDLRITLIKFDFGTEKFGYVSLPPPCQVHGFEASNLSVVG 259
Query: 277 DHPFNHVLEVLSNRLCLCYFNDIHCVVWLIKKYG--NQQSWKKLM 319
D + +++ S VW+ K G N SW K++
Sbjct: 260 DEKLSVLVQAGSTS---------KTEVWVTSKIGEANVVSWSKVL 295
>At1g51320 hypothetical protein
Length = 375
Score = 52.4 bits (124), Expect = 4e-07
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 8 LPWLPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRL 67
LPW EL+ EIL RVP S++ F+ VCK W +L D +F DH+ S + T ++
Sbjct: 6 LPW---ELVEEILCRVPPQSLVKFRTVCKQWNSLFDDNKFVNDHFVQSQPQLIFRTESKI 62
Query: 68 ASLGCYDRTPFSSVTSL 84
S+ + P V L
Sbjct: 63 YSVAVNFKGPRIEVHEL 79
>At3g62380 putative protein
Length = 325
Score = 50.8 bits (120), Expect = 1e-06
Identities = 47/178 (26%), Positives = 79/178 (43%), Gaps = 16/178 (8%)
Query: 105 YVQSLLENPLAPLETCRFNVQTKWVHILGSCNGLLCLADRSCLFRLMNPFTRLASKRSPP 164
++ + + +P+ +++ I+G CNG++C+ D ++ L+NP TR SP
Sbjct: 48 HINIFIHSYTSPVPYPKYSTYDTVGQIMGYCNGIVCIYDLGYIY-LINPATRKLRILSPE 106
Query: 165 LDVRSPPVDLDVRDDVITQYGFGYDQVNNKYKVLITYGFPR-VTKLYTFGTKSW-TTIQN 222
+R +D+ GFG D V YKV++ Y F R K K+
Sbjct: 107 F-LREYTGRTGWSNDLPINVGFGRDMVTGTYKVILMYLFDRNFVKTEALNLKNGERRYVY 165
Query: 223 FPCDHQVPWRWWDKQGKFVSGSLNWWVPERN---------GIISFDLEKETYGEVLLP 271
FP + DK+ F +GSL +W+P+ + + + DL ET+ V LP
Sbjct: 166 FPISYGQLGN--DKRSIFANGSL-YWLPKPDVDFYTNQLIKLAAIDLHTETFRYVPLP 220
>At1g58090 hypothetical protein
Length = 371
Score = 50.4 bits (119), Expect = 2e-06
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 11 LPDELIFEILFRVPVSSVMSFKCVCKSWKTLISDPQFAKDHYRTSFSSVTSMTHQRLASL 70
LP +L EILFRVP S++ F+ VC+ W TL + +F ++ + TH + S+
Sbjct: 6 LPLDLEEEILFRVPPRSLVRFRSVCREWNTLFKNKRFINKNFACGRPEIMLNTHSHIYSI 65
Query: 71 G--CYDRTPFSSVTSLTFQQLVSLAFYDDRKSLTSCYVQSLLENPLAPLETCRFNVQTKW 128
D P V L F L ++ + ++ S L + F QTKW
Sbjct: 66 SVDLKDENPTIKVRDLRFDHLSCRGYHLYGICDGNFFMYSFLNGGGGVVWNPLFWRQTKW 125
Query: 129 V 129
+
Sbjct: 126 I 126
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.324 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,831,018
Number of Sequences: 26719
Number of extensions: 434328
Number of successful extensions: 1738
Number of sequences better than 10.0: 319
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1303
Number of HSP's gapped (non-prelim): 419
length of query: 396
length of database: 11,318,596
effective HSP length: 101
effective length of query: 295
effective length of database: 8,619,977
effective search space: 2542893215
effective search space used: 2542893215
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0314.20