BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0314.19
         (86 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g10160 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydrata...   138  4e-34
At2g22230 beta-hydroxyacyl-ACP dehydratase like protein               132  2e-32
At3g45870 putative protein                                             25  6.8

>At5g10160 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase
           -like protein
          Length = 219

 Score =  138 bits (348), Expect = 4e-34
 Identities = 69/85 (81%), Positives = 75/85 (88%)

Query: 1   LLLQAMAQVGVLVMLQPEGGGSRENFFFVGIDKVRFCKPVIAGDTLVMRMTLTKLQKSFE 60
           L+++AMAQVG +VMLQPE GGSR NFFF GIDKVRF KPVIAGDTLVMRMTL KLQK F 
Sbjct: 132 LMVEAMAQVGGIVMLQPEVGGSRSNFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFG 191

Query: 61  LAKMEGKAYVGGEVVCEGEFLMAIG 85
           +AKMEGKAYVG  VVCEGEFLMA+G
Sbjct: 192 IAKMEGKAYVGNSVVCEGEFLMAMG 216


>At2g22230 beta-hydroxyacyl-ACP dehydratase like protein
          Length = 220

 Score =  132 bits (333), Expect = 2e-32
 Identities = 65/82 (79%), Positives = 73/82 (88%)

Query: 1   LLLQAMAQVGVLVMLQPEGGGSRENFFFVGIDKVRFCKPVIAGDTLVMRMTLTKLQKSFE 60
           L+++AMAQVG +VMLQPE GGS++NFFF GIDKVRF KPVIAGDTLVMRMTL K QK F 
Sbjct: 133 LMIEAMAQVGGIVMLQPEVGGSQDNFFFAGIDKVRFRKPVIAGDTLVMRMTLLKFQKRFG 192

Query: 61  LAKMEGKAYVGGEVVCEGEFLM 82
           LAKMEGKAYVGG +VCEGEF+M
Sbjct: 193 LAKMEGKAYVGGALVCEGEFMM 214


>At3g45870 putative protein
          Length = 355

 Score = 25.0 bits (53), Expect = 6.8
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 61  LAKMEGKAYVGGEVVC-EGEFLMAI 84
           L K+EG+A VGG ++C  G  LM +
Sbjct: 130 LFKLEGQAKVGGTLICVAGAVLMVL 154


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.142    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,675,541
Number of Sequences: 26719
Number of extensions: 52208
Number of successful extensions: 103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 101
Number of HSP's gapped (non-prelim): 3
length of query: 86
length of database: 11,318,596
effective HSP length: 62
effective length of query: 24
effective length of database: 9,662,018
effective search space: 231888432
effective search space used: 231888432
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)