BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0304.9
         (156 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g44610 protein kinase-like protein                                  31  0.24
At4g15393 putative protein                                             26  9.9

>At3g44610 protein kinase-like protein
          Length = 451

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 19/62 (30%), Positives = 33/62 (52%), Gaps = 2/62 (3%)

Query: 93  NLRDSAAVRYLSYRLRATDGCRSDIIINLSVKLLGSPDTCQTVIGIPVTAVRGVDKKQLA 152
           +LR S ++  L +RLR   G    + +     L    +T  T + +P+ A + +DKK+LA
Sbjct: 59  SLRSSLSLSDLRFRLRLGSGDIGSVFLAEFKSLTAVTET--TAVKLPLLAAKVMDKKELA 116

Query: 153 AR 154
           +R
Sbjct: 117 SR 118


>At4g15393 putative protein
          Length = 453

 Score = 25.8 bits (55), Expect = 9.9
 Identities = 13/41 (31%), Positives = 22/41 (52%)

Query: 50 VDHTFFFDTQHSSLQLHLYNKRRILGPTQLGWCMIPALDIG 90
          +  TF F   H ++QL  + K ++L  +  G  +I + DIG
Sbjct: 45 IGETFEFMKLHDAIQLPTFVKEKLLRTSLFGGKVIISTDIG 85


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.323    0.138    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,342,066
Number of Sequences: 26719
Number of extensions: 132165
Number of successful extensions: 215
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 214
Number of HSP's gapped (non-prelim): 2
length of query: 156
length of database: 11,318,596
effective HSP length: 91
effective length of query: 65
effective length of database: 8,887,167
effective search space: 577665855
effective search space used: 577665855
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)