Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0302a.8
         (578 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g38180 unknown protein (At4g38180)                                 209  4e-54
At1g76320 putative phytochrome A signaling protein                    162  5e-40
At4g15090 unknown protein                                             156  3e-38
At1g10240 unknown protein                                             152  5e-37
At5g28530 far-red impaired response protein (FAR1) - like             149  3e-36
At3g06250 unknown protein                                             149  3e-36
At5g18960 FAR1 - like protein                                         147  2e-35
At1g80010 hypothetical protein                                        144  1e-34
At2g27110 Mutator-like transposase                                    143  2e-34
At3g22170 far-red impaired response protein, putative                 137  2e-32
At1g52520 F6D8.26                                                     132  4e-31
At2g32250 Mutator-like transposase                                    119  5e-27
At4g19990 putative protein                                            112  4e-25
At4g38170 hypothetical protein                                         99  5e-21
At1g36090 hypothetical protein                                         64  2e-10
At4g28970 putative protein                                             63  5e-10
At4g09380 putative protein                                             62  7e-10
At4g08720 putative protein                                             61  1e-09
At3g47310 putative protein                                             61  2e-09
At4g08610 predicted transposon protein                                 59  6e-09

>At4g38180 unknown protein (At4g38180)
          Length = 788

 Score =  209 bits (531), Expect = 4e-54
 Identities = 121/373 (32%), Positives = 193/373 (51%), Gaps = 15/373 (4%)

Query: 14  LDLMKYDFLD---SEVAYLFYHWYG*VNGFAVR-KYIKIHNKEGLVIQRNFVCHKEGLRE 69
           LDL  YD L+    E A  FY+ Y    GF+ R    +   ++G +IQR FVC KEG R 
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 70  -DRGLTMDKRQRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIA 128
            +   T D+  +  RT  R GC A   V + + +G+W    F  +HNHEL        + 
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKM-QDSGKWLVSGFVKDHNHELVPPDQVHCLR 187

Query: 129 AHRKMNESDIMHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKK 188
           +HR+++      ++ +  +G+   +I +    + GG  KV F++ +  N   R  R K  
Sbjct: 188 SHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYM-RNNRQKSI 246

Query: 189 EPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFD 248
           E E    +  + Y+R + + +P  +     ++D ++  +FW+D  + +++  FGD V FD
Sbjct: 247 EGE---IQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFD 303

Query: 249 ATYGKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVI 308
            TY  NRY+ PF  F GVNHH +  +F  A + NE   ++VWL   +L AM    P+ + 
Sbjct: 304 TTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSIT 363

Query: 309 TDGDKAMKAAIKQVFPNAHHRLCAWHILDNARK---HVHIR--AFNTELRKCMFMELDVS 363
           TD D  ++AAI  VFP A HR C WHIL   ++   HV ++  +F ++  KC+ +   V 
Sbjct: 364 TDHDAVIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVE 423

Query: 364 EFEEHWAATVAKF 376
           +FE  W + + K+
Sbjct: 424 DFERCWFSLLDKY 436


>At1g76320 putative phytochrome A signaling protein
          Length = 670

 Score =  162 bits (410), Expect = 5e-40
 Identities = 106/377 (28%), Positives = 177/377 (46%), Gaps = 21/377 (5%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNKEGL-VIQRNFVCHKEGLREDRGLTMDKR 78
           +F   E AYLFY  Y    GF   K     ++     I   F C + G ++     ++ R
Sbjct: 2   EFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINPR 61

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDI 138
                   + GC A   V   + +G+WY   F  EHNH+L  ++      +HR  N   +
Sbjct: 62  ASP-----KIGCKASMHVK-RRPDGKWYVYSFVKEHNHDLLPEQ-AHYFRSHR--NTELV 112

Query: 139 MHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEPEKTDAEFA 198
              ++  R   +TP    T       Y  + F  G M N   + RR+     +  DAE  
Sbjct: 113 KSNDSRLRRKKNTPL---TDCKHLSAYHDLDFIDGYMRNQHDKGRRLVL---DTGDAEIL 166

Query: 199 ISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKC 258
           + ++  +  ++P  +     ++D  L  +FW D     +Y+ F DVV+F+ +Y  ++YK 
Sbjct: 167 LEFLMRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKV 226

Query: 259 PFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAA 318
           P V+F GVNHH +  +    L++++ + TYVWL++ +L AM G+ P  ++TD + A+KAA
Sbjct: 227 PLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAA 286

Query: 319 IKQVFPNAHHRLCAWHILDNARKHVHI-----RAFNTELRKCMFMELDVSEFEEHWAATV 373
           I  V P   H  C WH+LD   +++         F  +L KC++      EF+  W   +
Sbjct: 287 IAAVLPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFDRRWLKLI 346

Query: 374 AKFGWKKILGLRNYMKE 390
            KF  + +  +R+  +E
Sbjct: 347 DKFHLRDVPWMRSLYEE 363


>At4g15090 unknown protein
          Length = 768

 Score =  156 bits (395), Expect = 3e-38
 Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 37/340 (10%)

Query: 56  IQRNFVCHKEGL--REDRGLTMDKRQRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDE 113
           I   F C + G+    +   +  +R    +TD +     K R      +G+W    F  +
Sbjct: 34  IDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRR-----PDGKWIIHEFVKD 88

Query: 114 HNHELEDDKMCGMIAAHRKM---------NESDIMHMNNMSRSGISTPQIHNTFASQTGG 164
           HNHEL        +A H ++         N  DI+H  +       T +++   + Q+GG
Sbjct: 89  HNHEL-----LPALAYHFRIQRNVKLAEKNNIDILHAVSER-----TKKMYVEMSRQSGG 138

Query: 165 YQKVRFSKGNMY--NVQGRQRRMKKKEPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDG 222
           Y+ +    G++   +V  +  + +    E+ D++  + Y + +  ++P  +     N+D 
Sbjct: 139 YKNI----GSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQ 194

Query: 223 NLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVFYGVNHHNKSTIFSTALVSN 282
            L  LFW+D  S+ +Y  F DVV+FD TY K   K P  +F GVNHH++  +   ALV++
Sbjct: 195 RLRNLFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFIGVNHHSQPMLLGCALVAD 254

Query: 283 EKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARK- 341
           E +ET+VWL++ +L AM G+AP  ++TD DK + +A+ ++ PN  H    WH+L+   + 
Sbjct: 255 ESMETFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLPNTRHCFALWHVLEKIPEY 314

Query: 342 --HVHIRAFNTELR--KCMFMELDVSEFEEHWAATVAKFG 377
             HV  R  N  L+  KC+F      EF+  W   V++FG
Sbjct: 315 FSHVMKRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFG 354


>At1g10240 unknown protein
          Length = 680

 Score =  152 bits (384), Expect = 5e-37
 Identities = 102/368 (27%), Positives = 173/368 (46%), Gaps = 17/368 (4%)

Query: 21  FLDSEVAYLFYHWYG*VNGFAVRKYIKIHNKEGL---VIQRNFVCHKEGLREDRGLTMDK 77
           FL  + AY FY  +    GF++R++ +   K+G+   + +R FVCH+ G    + L+  K
Sbjct: 54  FLTHDTAYEFYSTFAKRCGFSIRRH-RTEGKDGVGKGLTRRYFVCHRAGNTPIKTLSEGK 112

Query: 78  RQRESRTDFRCGCTAKFRVH--IDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNE 135
            QR  R+  RCGC A  R+    +  +  W    F++ HNHEL +      + A+R +++
Sbjct: 113 PQRNRRSS-RCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRSISD 171

Query: 136 SDIMHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEPEKTDA 195
           +D   +   S++GIS  Q+      +     +  F      +V+   +  KK +PE  + 
Sbjct: 172 ADKSRILMFSKTGISVQQMMRLLELEK--CVEPGFLPFTEKDVRNLLQSFKKLDPEDENI 229

Query: 196 EFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNR 255
           +F +   + +  KDP        + +  L+ + WS   S  +Y++FGD V FD T+  + 
Sbjct: 230 DF-LRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRLSA 288

Query: 256 YKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAM 315
            + P  ++ GVN++     F   L+ +E + ++ W L+ F   M GKAP  ++TD +  +
Sbjct: 289 VEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCL 348

Query: 316 KAAIKQVFPNAHHRLCAWHILD------NARKHVHIRAFNTELRKCMFMELDVSEFEEHW 369
           K AI    P   H LC W ++       NA        +  E  +   +E  V EFE  W
Sbjct: 349 KEAIAGEMPATKHALCIWMVVGKFPSWFNAGLGERYNDWKAEFYRLYHLE-SVEEFELGW 407

Query: 370 AATVAKFG 377
              V  FG
Sbjct: 408 RDMVNSFG 415


>At5g28530 far-red impaired response protein (FAR1) - like
          Length = 700

 Score =  149 bits (377), Expect = 3e-36
 Identities = 96/372 (25%), Positives = 179/372 (47%), Gaps = 17/372 (4%)

Query: 21  FLDSEVAYLFYHWYG*VNGFAVRKYIKIHNKEGLVIQRNFVCHKEGLREDRGLTMDKRQR 80
           F   + A+ +Y  +   +GF++RK     ++   V +R+FVC++ G  + R     +  R
Sbjct: 76  FTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEHPR 135

Query: 81  ESRTDFRCGCTAKFRVHIDKTNG--RWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDI 138
           E R   RCGC  K  +  +  +G   WY   FS+ HNHEL +D    ++ A+RK+ +SD 
Sbjct: 136 E-RKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYRKIQQSDQ 194

Query: 139 MHMNNMSRSGISTPQIHNTFASQTGGYQ-KVRFSKGNMYN-VQGRQRRMKKK-----EPE 191
             +  +S++G    +I      + G    ++ F + ++ N V+  ++ +++      E  
Sbjct: 195 ERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKSVQENDAFMTEKR 254

Query: 192 KTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATY 251
           ++D    +   +GL  +D        ++++  ++ + W+ G S   Y +FGDVV FD +Y
Sbjct: 255 ESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSY 314

Query: 252 GKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDG 311
               Y     VF+G++++ K+ +    L+ +E   ++ W L+ F+  M+G+ P  ++TD 
Sbjct: 315 RSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTDI 374

Query: 312 DKAMKAAIKQVFPNAHHRLCAWHILDNARKHV------HIRAFNTELRKCMFMELDVSEF 365
           D  +K AI +  PN +H +   HI+             H   F       +    +V EF
Sbjct: 375 DTGLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGF-DMLCRAGNVDEF 433

Query: 366 EEHWAATVAKFG 377
           E+ W   V +FG
Sbjct: 434 EQQWDLLVTRFG 445


>At3g06250 unknown protein
          Length = 764

 Score =  149 bits (377), Expect = 3e-36
 Identities = 107/384 (27%), Positives = 164/384 (41%), Gaps = 65/384 (16%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNK-EGLVIQRNFVCHKEGLREDRGLTMDKR 78
           +F  +  A  FY  Y  V GF VR      +K +G +  R FVC KEG +          
Sbjct: 195 EFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPS------- 247

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNES-- 136
                   R GC A  R+    + G W     + +HNH+LE  K     A  +K+ +   
Sbjct: 248 --------RMGCGAYMRIKRQDSGG-WIVDRLNKDHNHDLEPGKKN---AGMKKITDDVT 295

Query: 137 ------DIMHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEP 190
                 D++ +N++S    ST +  NT   +              Y V            
Sbjct: 296 GGLDSVDLIELNDLSNHISSTRE--NTIGKE-------------WYPV------------ 328

Query: 191 EKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDAT 250
                   + Y +   ++D   +     + +G+   +FW+D  S+     FGD V FD +
Sbjct: 329 -------LLDYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGDAVVFDTS 381

Query: 251 YGKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITD 310
           Y K  Y  PF  F G NHH +  +   ALV++E  E + WL + +L AM G+ P  ++ D
Sbjct: 382 YRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMSGRRPRSMVAD 441

Query: 311 GDKAMKAAIKQVFPNAHHRLCAWHILDNARKHVHI--RAFNTELRKCMFMELDVSEFEEH 368
            D  ++ A+ QVFP  HHR  AW I    R+++      F  E  KC++      EF+  
Sbjct: 442 QDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLRSFPNEFKYEYEKCLYQSQTTVEFDTM 501

Query: 369 WAATVAKFGWKKILGLRN-YMKEE 391
           W++ V K+G +  + LR  Y K E
Sbjct: 502 WSSLVNKYGLRDNMWLREIYEKRE 525



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 17/100 (17%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNK-EGLVIQRNFVCHKEGLREDRGLTMDKR 78
           +F  +E A  +Y+ Y    GF VR      ++ +G V  R FVC KEG            
Sbjct: 33  EFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF----------- 81

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHEL 118
           Q  SRT    GC A  RV   +  G+W       EHNH+L
Sbjct: 82  QLNSRT----GCPAFIRVQ-RRDTGKWVLDQIQKEHNHDL 116


>At5g18960 FAR1 - like protein
          Length = 788

 Score =  147 bits (371), Expect = 2e-35
 Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 51/377 (13%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNK-EGLVIQRNFVCHKEGLREDRGLTMDKR 78
           +F  +  A  FY  Y  V GF VR      +K +G +  R FVC +EG +          
Sbjct: 216 EFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHPS------- 268

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDI 138
                   R GC A  R+    + G W     + +HNH+LE  K           N++ +
Sbjct: 269 --------RMGCGAYMRIKRQDSGG-WIVDRLNKDHNHDLEPGKK----------NDAGM 309

Query: 139 MHMNNMSRSGISTPQIH--NTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEPEKTDAE 196
             + +    G+ +  +   N F              GN +  + R+ R+ K+        
Sbjct: 310 KKIPDDGTGGLDSVDLIELNDF--------------GNNHIKKTRENRIGKEW-----YP 350

Query: 197 FAISYIRGLGSKDP-LLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNR 255
             + Y +   ++D    Y   +  ++G+   +FW+D  ++     FGD V FD +Y K  
Sbjct: 351 LLLDYFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGS 410

Query: 256 YKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAM 315
           Y  PF    G NHH +  +   A+V++E  E ++WL + +L AM G+ P  ++ D D  +
Sbjct: 411 YSVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPI 470

Query: 316 KAAIKQVFPNAHHRLCAWHILDNARKHV--HIRAFNTELRKCMFMELDVSEFEEHWAATV 373
           + A+ QVFP AHHR  AW I +  R+++      F  E  KC++    + EF+  W+A +
Sbjct: 471 QQALVQVFPGAHHRYSAWQIREKERENLIPFPSEFKYEYEKCIYQTQTIVEFDSVWSALI 530

Query: 374 AKFGWKKILGLRNYMKE 390
            K+G +  + LR   ++
Sbjct: 531 NKYGLRDDVWLREIYEQ 547



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 17/100 (17%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNK-EGLVIQRNFVCHKEGLREDRGLTMDKR 78
           +F  +E A  FY+ Y    GF VR      ++ +G V  R FVC KEG            
Sbjct: 48  EFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF----------- 96

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHEL 118
           Q  SRT    GCTA  RV   +  G+W       EHNHEL
Sbjct: 97  QLNSRT----GCTAFIRVQ-RRDTGKWVLDQIQKEHNHEL 131


>At1g80010 hypothetical protein
          Length = 696

 Score =  144 bits (364), Expect = 1e-34
 Identities = 113/378 (29%), Positives = 170/378 (44%), Gaps = 39/378 (10%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVR---KYIKIHNKE--GLVIQRNFVCHKEGLREDRGLT 74
           +F   + AY FY+ Y    GFA+R    + K ++KE  G V+     C+ +G +    L 
Sbjct: 71  EFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVL----CCNCQGFK----LL 122

Query: 75  MDKRQRESRTDFRCGCTAKFR---VHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHR 131
            D   R   T  R GC A  R   +H D    RW       +HNH   D +      +H+
Sbjct: 123 KDAHSRRKET--RTGCQAMIRLRLIHFD----RWKVDQVKLDHNHSF-DPQRAHNSKSHK 175

Query: 132 KMNESDIMHMNNMSRSG----ISTPQIHNTFASQTGGYQKVRFSKGNMYNVQ----GRQR 183
           K + S                + T +++ T A  T        S G   ++        R
Sbjct: 176 KSSSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSR 235

Query: 184 RMKKKEPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGD 243
           R++ +   +   +F   + +   S    LY   +A DDG+L  +FW D  ++  Y  FGD
Sbjct: 236 RLELRGGFRALQDF---FFQIQLSSPNFLYLMDLA-DDGSLRNVFWIDARARAAYSHFGD 291

Query: 244 VVAFDATYGKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKA 303
           V+ FD T   N Y+ P V F G+NHH  + +    L++++  ETYVWL   +L  M G+ 
Sbjct: 292 VLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRP 351

Query: 304 PLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHV----HIRAFNTELRKCMFME 359
           P   IT+  KAM+ A+ +VFP AHHRL   H+L N  + V        F   L + ++  
Sbjct: 352 PQIFITEQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMALNRVVYGC 411

Query: 360 LDVSEFEEHWAATVAKFG 377
           L V EFE  W   + +FG
Sbjct: 412 LKVEEFETAWEEMIIRFG 429


>At2g27110 Mutator-like transposase
          Length = 851

 Score =  143 bits (361), Expect = 2e-34
 Identities = 94/362 (25%), Positives = 157/362 (42%), Gaps = 37/362 (10%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNKEGLVIQRNFVCHKEGLREDRGLTMDKRQ 79
           +F   + A  FY  Y    GF  +    +   +G V  R FVC     R  R L+     
Sbjct: 54  EFNSEKEAKSFYDEYSRQLGFTSKL---LPRTDGSVSVREFVCSSSSKRSKRRLSES--- 107

Query: 80  RESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDIM 139
                     C A  R+ + + + +W    F  EH H L    M   +   R    S+  
Sbjct: 108 ----------CDAMVRIEL-QGHEKWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSE-- 154

Query: 140 HMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEPEKTDAEFAI 199
              +  + G++ P           G   V     N    +        K     DA   +
Sbjct: 155 --KSSYQEGVNVPS----------GMMYVSMD-ANSRGARNASMATNTKRTIGRDAHNLL 201

Query: 200 SYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKCP 259
            Y + + +++P  +     ++D  +  +FW+D  S++ Y  FGD V  D  Y  N+++ P
Sbjct: 202 EYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVP 261

Query: 260 FVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAI 319
           F  F GVNHH ++ +F  AL+ +E   +++WL + FL AM+ + P+ ++TD D+A++ A 
Sbjct: 262 FAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAA 321

Query: 320 KQVFPNAHHRLCAWHIL-DNARKHVHI----RAFNTELRKCMFMELDVSEFEEHWAATVA 374
            QVFP A H +  W +L +   K  H+     +F  EL  C+     + EFE  W++ + 
Sbjct: 322 GQVFPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFESSWSSVID 381

Query: 375 KF 376
           K+
Sbjct: 382 KY 383


>At3g22170 far-red impaired response protein, putative
          Length = 814

 Score =  137 bits (345), Expect = 2e-32
 Identities = 104/387 (26%), Positives = 169/387 (42%), Gaps = 48/387 (12%)

Query: 11  LVPLDLMKYDFLDSEVAYLFYHWYG*VNGFAVRKYIKIHNKEGL-VIQRNFVCHKEGLRE 69
           L PL+ M+++      AY FY  Y    GF         +K     I   F C + G + 
Sbjct: 68  LEPLNGMEFE--SHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKR 125

Query: 70  DRGLTMDK-RQRESRTDFR-------CGCT-AKFRVHIDKT-NGRWYAKLFSDEHNHELE 119
           +   + ++ R R+S+ D         C  T  K  +H+ +  +G+W    F  EHNHEL 
Sbjct: 126 EYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHEL- 184

Query: 120 DDKMCGMIAAHRKMNESDIMHMNNMSRSGIS--TPQIHNTFASQTGGYQKVRFSKGNMYN 177
                                   +    +S  T +I+   A Q   Y+ V   K +  +
Sbjct: 185 ------------------------LPAQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKS 220

Query: 178 VQGRQRRMKKKEPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLN 237
              + R +     E  D +  + ++  + S +   +      DD  +  +FW D  S+ N
Sbjct: 221 SFEKGRTLSV---ETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHN 277

Query: 238 YQVFGDVVAFDATYGKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLE 297
           Y  F DVV+ D TY +N+YK P  +F GVN H +  +   AL+S+E   TY WL+E +L 
Sbjct: 278 YGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLR 337

Query: 298 AMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHV-----HIRAFNTEL 352
           A+ G+AP  +IT+ D  M + + ++FPN  H L  WH+L    +++         F  + 
Sbjct: 338 AIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKF 397

Query: 353 RKCMFMELDVSEFEEHWAATVAKFGWK 379
            KC++      +F   W   +A+FG K
Sbjct: 398 EKCIYKSGKDEDFARKWYKNLARFGLK 424


>At1g52520 F6D8.26
          Length = 703

 Score =  132 bits (333), Expect = 4e-31
 Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 34/400 (8%)

Query: 1   QDILGIDLKKLVPLDLMKYDFLDSEVAYLFYHWYG*VNGFAVR---KYIKIHNKE--GLV 55
           Q  L +D +K      +  +F   + AY +Y+ Y    GF VR    + K  +KE  G V
Sbjct: 71  QSGLLVDERKEFDAPAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAV 130

Query: 56  IQRNFVCHKEGLREDRGLTMDKRQRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHN 115
           +     C  +G +  R   +++ ++E+RT    GC A  R+     + RW     + +HN
Sbjct: 131 L----CCSSQGFK--RINDVNRVRKETRT----GCPAMIRMR-QVDSKRWRVVEVTLDHN 179

Query: 116 HELEDDKMCGMIAAHRKMNESDIMHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNM 175
           H L   K+   +   RK   S +        S   T +++       G       +    
Sbjct: 180 HLL-GCKLYKSVKRKRKCVSSPV--------SDAKTIKLYRACVVDNGSNVNPNSTLNKK 230

Query: 176 Y-NVQGRQRRMKKKEPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGIS 234
           + N  G    +  K   + D+    +Y   +   +P  +     ND+G L  +FW+D  S
Sbjct: 231 FQNSTGSPDLLNLK---RGDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFS 287

Query: 235 QLNYQVFGDVVAFDATYGKNRYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLER 294
           +++   FGDV+  D++Y   +++ P V F GVNHH K+T+ S   ++ E +E+Y WLL+ 
Sbjct: 288 KVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKV 347

Query: 295 FLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHV----HIRAFNT 350
           +L  MK ++P  ++TD  K ++AAI QVFP +H R    HI+    + +    +  A   
Sbjct: 348 WLSVMK-RSPQTIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDAVRK 406

Query: 351 ELRKCMFMELDVSEFEEHWAATVAKFGWKKILGLRNYMKE 390
              K ++  L V EFE  W   V  FG  +   LR+  +E
Sbjct: 407 AFTKAVYETLKVVEFEAAWGFMVHNFGVIENEWLRSLYEE 446


>At2g32250 Mutator-like transposase
          Length = 684

 Score =  119 bits (298), Expect = 5e-27
 Identities = 87/363 (23%), Positives = 139/363 (37%), Gaps = 55/363 (15%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFAVR-KYIKIHNKEGLVIQRNFVCHKEGLREDRGLTMDKR 78
           DF   E AY FY  Y    GF +  K  +   + G  I     C + G + ++   ++ R
Sbjct: 43  DFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKATAINPR 102

Query: 79  QRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDI 138
                   + GC A   +   K + +W    F  EHNHE+  D     +    K      
Sbjct: 103 SCP-----KTGCKAGLHMK-RKEDEKWVIYNFVKEHNHEICPDDFYVSVRGKNK------ 150

Query: 139 MHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKKKEPEKTDAEFA 198
                                             G +   +G Q  +     E+ D +  
Sbjct: 151 --------------------------------PAGALAIKKGLQLAL-----EEEDLKLL 173

Query: 199 ISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKC 258
           + +   +  K P  +     + D  +  +FW D  ++ +Y  F DVV FD  Y +N Y+ 
Sbjct: 174 LEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVRNGYRI 233

Query: 259 PFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAA 318
           PF  F GV+HH +  +   AL+      TY WL   +L+A+ G+AP  +ITD DK +   
Sbjct: 234 PFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLLSDI 293

Query: 319 IKQVFPNAHHRLCAWHILDNARKHVH-----IRAFNTELRKCMFMELDVSEFEEHWAATV 373
           + +VFP+  H  C W +L    + ++        F      C+        FE  W+  +
Sbjct: 294 VVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFERRWSNMI 353

Query: 374 AKF 376
            KF
Sbjct: 354 GKF 356


>At4g19990 putative protein
          Length = 672

 Score =  112 bits (281), Expect = 4e-25
 Identities = 96/389 (24%), Positives = 161/389 (40%), Gaps = 74/389 (19%)

Query: 20  DFLDSEVAYLFYHWYG*VNGFA-VRKYIKIHNKEGLVIQRNFVCHKEGLRE---DRGLTM 75
           +F   E A+ FY  Y    GF  + K  +     G  I   FVC + G ++   D GL  
Sbjct: 26  EFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGT 85

Query: 76  D--------KRQRESRTDFRCGCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMI 127
           D        KR R +R+  +  C A   V   + +GRW  +    EHNHE+      G  
Sbjct: 86  DGFNIPQARKRGRINRSSSKTDCKAFLHVK-RRQDGRWVVRSLVKEHNHEI----FTGQA 140

Query: 128 AAHRKMNESDIMHMNNMSRSGISTPQIHNTFASQTGGYQKVRFSKGNMYNVQGRQRRMKK 187
            + R+++                             G +K+    G +       + +K 
Sbjct: 141 DSLRELS-----------------------------GRRKLEKLNGAIV------KEVKS 165

Query: 188 KEPEKTDAEFAISYIRGLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAF 247
           ++ E  D E  +++   + S                L  +FW D   + +Y  F DVV+ 
Sbjct: 166 RKLEDGDVERLLNFFTDMQS----------------LRNIFWVDAKGRFDYTCFSDVVSI 209

Query: 248 DATYGKNRYKCPFVVFYGVNHHNKSTIFSTA-LVSNEKIETYVWLLERFLEAMKGKAPLF 306
           D T+ KN YK P V F GVNHH +  +     L+++E    +VWL   +L+AM G  P  
Sbjct: 210 DTTFIKNEYKLPLVAFTGVNHHGQFLLLGFGLLLTDESKSGFVWLFRAWLKAMHGCRPRV 269

Query: 307 VITDGDKAMKAAIKQVFPNAHHRLCAWHILDN-ARKHVHI----RAFNTELRKCMFMELD 361
           ++T  D+ +K A+ +VFP++ H    W  L     K  H+    +    E+   ++    
Sbjct: 270 ILTKHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGHVIRLEKKLVDEINDAIYGSCQ 329

Query: 362 VSEFEEHWAATVAKFGWKKILGLRNYMKE 390
             +FE++W   V +F  +  + L++  ++
Sbjct: 330 SEDFEKNWWEVVDRFHMRDNVWLQSLYED 358


>At4g38170 hypothetical protein
          Length = 531

 Score = 99.4 bits (246), Expect = 5e-21
 Identities = 57/188 (30%), Positives = 94/188 (49%), Gaps = 12/188 (6%)

Query: 196 EFAISYIRGLGSKDP-LLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKN 254
           E  ++Y++    ++P  LY   + +D GN+   FW+D   +LNY  FGD + FD TY + 
Sbjct: 5   EHVLNYLKRRQLENPGFLYA--IEDDCGNV---FWADPTCRLNYTYFGDTLVFDTTYRRG 59

Query: 255 -RYKCPFVVFYGVNHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDK 313
            RY+ PF  F G NHH +  +F  AL+ NE   ++ WL + +L+AM    P  +  + D+
Sbjct: 60  KRYQVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDR 119

Query: 314 AMKAAIKQVFPNAHHRLCAWHILDNA-RKHVHI----RAFNTELRKCMFMELDVSEFEEH 368
            ++ A+ +VF     R     I +    K  H+      F +E   C+      +EFE  
Sbjct: 120 LIQVAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFEAS 179

Query: 369 WAATVAKF 376
           W + V ++
Sbjct: 180 WDSIVRRY 187


>At1g36090 hypothetical protein
          Length = 645

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 7/147 (4%)

Query: 227 LFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVF--YGVNHHNKSTIFSTALVSNEK 284
           LF + G     ++    V+  DAT+ K  Y    V+   +  NHH+    F   ++ +EK
Sbjct: 353 LFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAHDPNHHHYPLAFG--IIDSEK 410

Query: 285 IETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHVH 344
             +++W LE+          L  I+D  +++K A+K V+PNA H  C WH+  N R  V 
Sbjct: 411 DVSWIWFLEKLKTVYSDVPRLVFISDRHQSIKKAVKTVYPNALHAACIWHLCQNMRDRVK 470

Query: 345 I--RAFNTELRKCMFMELDVSEFEEHW 369
           I       + R C     + SEFE+ +
Sbjct: 471 IDKDGAAVKFRDCAHAYTE-SEFEKEF 496


>At4g28970 putative protein
          Length = 914

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 7/147 (4%)

Query: 227 LFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVFYGV--NHHNKSTIFSTALVSNEK 284
           LF + G     ++    V+  DAT+ K  Y    V+      NHH+    F   ++ +EK
Sbjct: 393 LFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAQDPNHHHYPLAFG--IIDSEK 450

Query: 285 IETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHVH 344
             +++W LE+          L  I+D  +++K A+K V+PNA H  C WH+  N R  V 
Sbjct: 451 DVSWIWFLEKLKTVYSDVPGLVFISDRHQSIKKAVKTVYPNALHAACIWHLCQNMRDRVT 510

Query: 345 I--RAFNTELRKCMFMELDVSEFEEHW 369
           I       + R C     + SEFE+ +
Sbjct: 511 IDKDGAAVKFRDCAHAYTE-SEFEKEF 536


>At4g09380 putative protein
          Length = 960

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 7/147 (4%)

Query: 227 LFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVFYGV--NHHNKSTIFSTALVSNEK 284
           LF + G     ++    V+  DAT+ K  Y    V+      NHH+    F   ++ +EK
Sbjct: 393 LFIALGACIEGFRAMRKVIVVDATHLKTVYGGMLVIATAQDPNHHHYPLAFG--IIDSEK 450

Query: 285 IETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHVH 344
             +++W LE           L  I+D  +++K A+K V+PNA H  C WH+  N R  V 
Sbjct: 451 DVSWIWFLENLKTVYSDVPGLVFISDRHQSIKKAVKTVYPNALHAACIWHLCQNMRDRVK 510

Query: 345 I--RAFNTELRKCMFMELDVSEFEEHW 369
           I       + R C     + SEFE+ +
Sbjct: 511 IDKDGAAVKFRDCAHAYTE-SEFEKEF 536


>At4g08720 putative protein
          Length = 848

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)

Query: 219 NDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVFYGVNHHNKSTIFSTA 278
           ++ G    LF + G S   +Q    V+  DAT+ KN Y    V     + +    I +  
Sbjct: 365 DESGKFQYLFIALGASIEGFQAMRKVIIVDATHLKNGYGGVLVFASARDPNRHHYIIAVG 424

Query: 279 LVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDN 338
           ++  E   ++ W  E+ L  +     L  ++D + ++   I+  +  AHH  C WH+  N
Sbjct: 425 VLDGENDASWGWFFEKLLSVVPDTPELVFMSDRNSSLIKGIRNAYTAAHHGYCVWHLSQN 484

Query: 339 ARKHVHIRAFNTELRKCMFMELD----VSEFEEHW 369
            +   H    N ++    FMEL      SEFE  +
Sbjct: 485 VK--AHSTNINRDVLAWRFMELSRIYTWSEFEREY 517


>At3g47310 putative protein
          Length = 735

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 67/290 (23%), Positives = 108/290 (37%), Gaps = 21/290 (7%)

Query: 89  GCTAKFRVHIDKTNGRWYAKLFSDEHNHELEDDKMCGMIAAHRKMNESDIMHMNNMSRSG 148
           GCT   RV   K +  W  ++    H      +     I        + ++H +      
Sbjct: 208 GCTWYLRVARTKKSHFWSVRVHRKMHTCSRSVETTSNSIQRGTPRLIASVLHCDYPGNLE 267

Query: 149 ISTPQIHNTFASQTGGYQKVRFS-----KGNMYNVQGRQRRMKKKEPEKTDAEFAISYIR 203
             TP   N   S   G   V  S     +G M +V        +  PE++      SY+ 
Sbjct: 268 TPTP---NNIMSIVRGRLGVHCSYSTALRGKMLHVSD-----VRGTPERSYT-MLFSYLY 318

Query: 204 GLGSKDPLLYCRHVANDDGNLDRLFWSDGISQLNYQVFGDVVAFDATYGKNRYKCPFVVF 263
            L   +P          +     LF + G     ++    V+  DAT+ K  Y    V+ 
Sbjct: 319 MLEKVNPGTVTYVELEGEKKFKYLFIALGACIEGFRTMRKVIVVDATHLKTVYGGMLVIA 378

Query: 264 YGV--NHHNKSTIFSTALVSNEKIETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQ 321
                NHH+    F   ++ +E   +++W LE+          L  I+D  +++K  +K 
Sbjct: 379 TAQDPNHHHYPLAFG--IIDSENDVSWIWFLEKLKTVYSDVPGLVFISDRHQSIKKVVKT 436

Query: 322 VFPNAHHRLCAWHILDNARKHVHI--RAFNTELRKCMFMELDVSEFEEHW 369
           V+PNA H  C WH+  N R  V I       + R C     + SEFE+ +
Sbjct: 437 VYPNALHAACIWHLCQNMRDRVKIDKDGAAVKFRDCAHAYTE-SEFEKEF 485


>At4g08610 predicted transposon protein
          Length = 907

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 35/119 (29%), Positives = 56/119 (46%), Gaps = 4/119 (3%)

Query: 227 LFWSDGISQLNYQVFGDVVAFDATYGKNRY--KCPFVVFYGVNHHNKSTIFSTALVSNEK 284
           LF S G+    ++V   VV  DAT+ K  Y     F      NHHN   I ++A++  E 
Sbjct: 395 LFVSLGVCIEGFKVMRKVVIVDATFLKTVYGDMLVFATAQDPNHHNY--IIASAVIDREN 452

Query: 285 IETYVWLLERFLEAMKGKAPLFVITDGDKAMKAAIKQVFPNAHHRLCAWHILDNARKHV 343
             ++ W   +    +  +  L  ++D  +++  +I  VFPNA H  C WH+  N +  V
Sbjct: 453 DASWSWFFNKLKTVIPDELGLVFVSDRHQSIIKSIMHVFPNARHGHCVWHLSQNVKVRV 511


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.340    0.149    0.499 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,478,561
Number of Sequences: 26719
Number of extensions: 518878
Number of successful extensions: 1731
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1587
Number of HSP's gapped (non-prelim): 111
length of query: 578
length of database: 11,318,596
effective HSP length: 105
effective length of query: 473
effective length of database: 8,513,101
effective search space: 4026696773
effective search space used: 4026696773
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 63 (28.9 bits)


Lotus: description of TM0302a.8