BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0265.9
(456 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46220 unknown protein 408 e-114
At1g28240 Unknown protein 186 2e-47
At1g53040 unknown protein 176 2e-44
At4g38500 unknown protein 174 7e-44
At2g02910 unknown protein 160 2e-39
At4g09630 putative protein 158 7e-39
At5g42660 unknown protein 135 4e-32
At1g34550 hypothetical protein 133 2e-31
At1g35070 hypothetical protein 32 0.56
At5g04510 3-phosphoinositide-dependent protein kinase-1 (PDK1) 31 1.6
At4g14210 phytoene dehydrogenase precursor (phytoene desaturase) 30 2.1
At4g01400 hypothetical protein 29 6.1
At5g13390 unknown protein 28 8.0
>At5g46220 unknown protein
Length = 320
Score = 408 bits (1048), Expect = e-114
Identities = 199/309 (64%), Positives = 250/309 (80%), Gaps = 10/309 (3%)
Query: 154 RIAMEKCKNVVVVSAIFNDHDKIRQPKGLGSKTLENVCFFIFIDDITLKRLEHHDLISRK 213
R+ MEKC +VV SAIFNDHDKIRQP GLG KTLE VCF++FIDD TL L HH++I +
Sbjct: 13 RVEMEKC-GLVVASAIFNDHDKIRQPVGLGVKTLETVCFYMFIDDKTLNSLFHHNVILKN 71
Query: 214 S-SEYKIGVWRVVKVSK-EYLYLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPL 271
+ S+Y++G WR++K+SK E LYLNPAMNGVIPKYL+HRLFPNS+FSIW+DAK++LM+DPL
Sbjct: 72 NPSDYRVGAWRIIKISKSENLYLNPAMNGVIPKYLIHRLFPNSKFSIWVDAKIQLMIDPL 131
Query: 272 LLIHSLVISENADMAISKHPFYVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWN 331
LLIHS+++ DMAISKHPF+V+TMEEAMATARWKKW D++ L++QMETYCE+GL+PW+
Sbjct: 132 LLIHSMLVVPEVDMAISKHPFFVNTMEEAMATARWKKWGDVDGLRIQMETYCEHGLKPWS 191
Query: 332 PSKLPYVSDVPDSALILRKHGLGSNLFSCLVFNELEAFNPRDQLAFAFVRDNMNPKLKLN 391
SKLPY +DVPD+ALILR+HG+ SNLFSC +FNELEAFNPRDQLAFAFVRD++NPK+K+N
Sbjct: 192 SSKLPYPTDVPDTALILRRHGIRSNLFSCFMFNELEAFNPRDQLAFAFVRDHINPKVKMN 251
Query: 392 MFEVEVFEQVTMEFRHNLGLSNGSTAKKLSRTGK------TKRAEPNLMYVNGSC-CSKC 444
MFEVEVFEQV +E+RHNL ST ++ K ++ L + + S S C
Sbjct: 252 MFEVEVFEQVVVEYRHNLKKIESSTYEEQEEEQKQESLRTIQKRRKWLDHESWSLNRSSC 311
Query: 445 QQYLSMMWG 453
+ YL+ MWG
Sbjct: 312 KNYLTDMWG 320
>At1g28240 Unknown protein
Length = 581
Score = 186 bits (472), Expect = 2e-47
Identities = 107/284 (37%), Positives = 166/284 (57%), Gaps = 15/284 (5%)
Query: 112 GNADSFGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--------FPISDSDRIAMEKCKNV 163
G +D FGG + R FD + ++ V CGF K F I ++D + M++C+ +
Sbjct: 210 GGSD-FGGYPTLKHRNDSFDIK-ETMSVHCGFVKGPQPGRNTGFDIDEADLLEMKQCRGI 267
Query: 164 VVVSAIFNDHDKIRQPKGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKIGVWR 223
VV SA+F+ D ++ P+ + E VCF++F+D+ T L+ + K+G+WR
Sbjct: 268 VVASAVFDAFDDVKAPQNISKYAEETVCFYMFVDEETESILKRERGLDGNK---KVGIWR 324
Query: 224 VVKVSKEYLYLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENA 283
VV V Y + NG +PK LVHR+FPN+++S+WID KL+L+VDP ++ + +NA
Sbjct: 325 VVVVHN-LPYSDGRRNGKVPKLLVHRMFPNARYSLWIDGKLELVVDPYQILERFLWRKNA 383
Query: 284 DMAISKHPFYVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVSDVPD 343
AIS+H + EA A K+ D ++ Q++ Y GL P++ +KLP SDVP+
Sbjct: 384 TFAISRHYKRFDVLVEAEANKAAGKY-DNASIDFQVDFYKNEGLTPYSVAKLPITSDVPE 442
Query: 344 SALILRKHGLGSNLFSCLVFNELEAFNPRDQLAFAFVRDNMNPK 387
+ILR+H SNLF+CL FNE++ F RDQ++F+ VRD + K
Sbjct: 443 GCVILREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKIAAK 486
>At1g53040 unknown protein
Length = 540
Score = 176 bits (446), Expect = 2e-44
Identities = 104/287 (36%), Positives = 162/287 (56%), Gaps = 15/287 (5%)
Query: 117 FGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--------FPISDSDRIAMEKCKNVVVVSA 168
FGG S R + FD + T V CGF K F I + +++ +V+V SA
Sbjct: 187 FGGYPSLEHRTNSFDIKESMT-VHCGFIKGTKPGHQTGFDIDEDILHELDQSHDVIVASA 245
Query: 169 IFNDHDKIRQPKGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKIGVWRVVKVS 228
IF +D I++P + +N+ F++F+D+ T L++ S ++G+WR++ V
Sbjct: 246 IFGKYDIIQEPVNISEMARKNIPFYMFVDEETHLYLKNTS--SYTDDNKRVGLWRIIVVH 303
Query: 229 KEYLYLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENADMAIS 288
Y + NG +PK L+HRLFPN ++SIW+DAKL+L+VDP ++ + N+ AIS
Sbjct: 304 N-VPYTDARRNGKVPKLLLHRLFPNVRYSIWVDAKLQLVVDPYQILERFLWRTNSSFAIS 362
Query: 289 KHPFYVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVSDVPDSALIL 348
+H EA A +K+ D ++ Q+E Y + GL P+ +KLP SDVP+ I+
Sbjct: 363 RHYRRFDVFVEAEANKAARKY-DNASIDYQVEFYKKEGLTPYTEAKLPITSDVPEGCTII 421
Query: 349 RKHGLGSNLFSCLVFNELEAFNPRDQLAFAFVRDNMNPKL--KLNMF 393
R+H +NLF+C+ FNE++ F RDQL+FA RD + K+ +NMF
Sbjct: 422 REHIPITNLFTCVWFNEVDRFTSRDQLSFAIARDKIREKVDWSINMF 468
>At4g38500 unknown protein
Length = 499
Score = 174 bits (442), Expect = 7e-44
Identities = 105/282 (37%), Positives = 165/282 (58%), Gaps = 10/282 (3%)
Query: 117 FGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--FPISDSDRIAMEKCKNVVVVSAIFNDHD 174
FGGN+S R F + + +V CGF + +S D+ ++KC+ VV + IF+ +D
Sbjct: 155 FGGNISWSEREESFKLKPEM-KVHCGFMPRGGAEMSSLDKEYVKKCR-FVVATGIFDAYD 212
Query: 175 KIRQPKGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKI--GVWRVVKVSKEYL 232
+ QP + +++ CF + +D+++L L + + RK E I G+WR++ + K
Sbjct: 213 EPHQPSNISKRSMNLFCFLMVVDEVSLDFLRKNTTV-RKDVEGGIWVGIWRLILL-KTPP 270
Query: 233 YLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENADMAISKHPF 292
Y P NG +PK L HRLFP +Q+SIWID K++L+VDPLL++ + AI++H
Sbjct: 271 YDEPRRNGKVPKILTHRLFPEAQYSIWIDGKMELIVDPLLILERYLWRGKHTFAIAQHKH 330
Query: 293 YVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVSDVPDSALILRKHG 352
+ + EEA A R +K + + + M+ Y GL+PW+ K VSDVP+ A+I+R+H
Sbjct: 331 HRNIYEEADACKR-RKRYARPLVDLHMKIYRYEGLEPWSIKK-NTVSDVPEGAVIIREHT 388
Query: 353 LGSNLFSCLVFNELEAFNPRDQLAFAFVRDNMNPKLKLNMFE 394
+NLFSCL FNE+ PRDQL+F +V D + K+ MF+
Sbjct: 389 AMNNLFSCLWFNEVHLLTPRDQLSFGYVVDRLKGAFKVFMFQ 430
>At2g02910 unknown protein
Length = 378
Score = 160 bits (404), Expect = 2e-39
Identities = 108/307 (35%), Positives = 166/307 (53%), Gaps = 18/307 (5%)
Query: 117 FGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--FPISDSDRIAMEKCKNVVVVSAIFNDHD 174
FGG+ + R + N + + CGF K F +S+ DR M+ C V V S IF D
Sbjct: 73 FGGHQTLSERERSYSAVNQT--IHCGFVKGTGFDLSEKDRAYMKNCV-VSVSSCIFGSSD 129
Query: 175 KIRQP--KGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKIGVWRVVKVSKEYL 232
+R+P K + + NVCF +F+D+ TL +L + K +G+W+ V VS
Sbjct: 130 FLRRPATKKISEFSKRNVCFVMFVDEQTLSKLASEGHVPDKQGF--VGLWKTVVVSN-LP 186
Query: 233 YLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENADMAISKHPF 292
Y + G +PK+L HRLFP+S++SIW+D+K++L DP+L+I + ++ AIS H
Sbjct: 187 YNDMRKTGKVPKFLSHRLFPSSRYSIWLDSKMRLTTDPMLIIDFFLWRTKSEFAISNHYD 246
Query: 293 YVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWNPS--KLPYVSDVPDSALILRK 350
+E + R K ++ +A+ Q Y +GL+ ++PS P S VP+ + I+R
Sbjct: 247 RHCVWDEVLQNKRLNK-YNHSAIDEQFMFYRSDGLKKFDPSDPNSPLPSYVPEGSFIVRA 305
Query: 351 HGLGSNLFSCLVFNELEAFNPRDQLAFAFV-----RDNMNPKLKLNMFEVEVFEQVTMEF 405
H SNLF+CL FNE++ F RDQL+FA+ R N + L+LNMF+ +T F
Sbjct: 306 HTPMSNLFTCLWFNEVDRFTSRDQLSFAYTYLKLQRLNSDRPLRLNMFKDCERRALTKLF 365
Query: 406 RHNLGLS 412
H + S
Sbjct: 366 HHRVDSS 372
>At4g09630 putative protein
Length = 711
Score = 158 bits (399), Expect = 7e-39
Identities = 106/309 (34%), Positives = 171/309 (55%), Gaps = 26/309 (8%)
Query: 117 FGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--------FPISDSDRIAMEKCKNVVVVSA 168
F G+ S R F Q ++ CGF K F +++ D + KC ++ V+S
Sbjct: 396 FAGHQSLQEREDSFLVQEQ--KIHCGFVKAPEGLPSTGFDLTEDDANYISKC-HIAVISC 452
Query: 169 IFNDHDKIRQP--KGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKIGVWRVVK 226
IF + D++R P K + S + ++VCF +F+D+IT++ L + + +G+W++V
Sbjct: 453 IFGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGF--VGLWKLVV 510
Query: 227 VSKEYLYLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENADMA 286
V + Y + G IPK L HRLF ++++SIW+D+KL+L +DPL+++ + E + A
Sbjct: 511 V-RNLPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYA 569
Query: 287 ISKHPFYVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWN---PSKLPYVSDVPD 343
IS H + H + E +A + ++ + Q E Y +GL +N P KL S+VP+
Sbjct: 570 ISNH-YDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKL-LPSNVPE 627
Query: 344 SALILRKHGLGSNLFSCLVFNELEAFNPRDQLAFAF-----VRDNMNPKLKLNMFEVEVF 398
+ I+R+H SNLFSCL FNE+E F PRDQL+FA+ R N + L+MF+
Sbjct: 628 GSFIVREHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCER 687
Query: 399 EQVTMEFRH 407
++T FRH
Sbjct: 688 RKITKLFRH 696
>At5g42660 unknown protein
Length = 463
Score = 135 bits (341), Expect = 4e-32
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 29/319 (9%)
Query: 97 RKSSTSSTKMLGYMHGNADSFG---GNLSTHLRFSYF-------DHQN-----DSTEVPC 141
RK S S K + Y+ S G G RF+ F + +N ++ + C
Sbjct: 132 RKDSGSPVKRVVYLTDTDVSVGEMRGVRGNGTRFNLFTGNQTFAERENSFQVRETVSLHC 191
Query: 142 GFFKK---FPISDSDRIAMEKCKNVVVVSAIFNDHDKIRQPKGLGSKTLENVCFFIFIDD 198
GFF + F ISD D+ M C+ VVV + F D + +P G+ + + VC+ F D+
Sbjct: 192 GFFNENGGFRISDKDKKFMTSCE-VVVSTCAFGGGDNLYEPIGMSKTSSQKVCYVAFWDE 250
Query: 199 ITL--KRLEHHDLISRKSSEYKIGVWRVVKVSKEYLYLNPAMNGVIPKYLVHRLFPNSQF 256
+TL + E H + IG WR+V V K+ + + +NG IPK L HRLFP++++
Sbjct: 251 VTLTTQEAEGHKI----DENDHIGKWRIVIV-KDLPFTDQRLNGKIPKMLAHRLFPDAKY 305
Query: 257 SIWIDAKLKLMVDPLLLIHSLVISENADMAISKHPFYVHTMEEAMATARWKKWWDINALK 316
SIW+D+K + DPL ++ +L+ N+ +AIS+H +EA A + K ++
Sbjct: 306 SIWVDSKSQFRRDPLGVLDALLWRTNSVLAISEHGARSSVYDEANAVIKKHKATP-EEVE 364
Query: 317 MQMETYCENGLQPWNPSKLPYVSDVPDSALILRKHGLGSNLFSCLVFNELEAFNPRDQLA 376
+Q+ Y + L + + ++++I+R+H +NLF CL FNE+ F RDQL+
Sbjct: 365 VQINQYRHDKLP--EDKRFNGKKALSEASVIVREHTPLTNLFMCLWFNEVVRFTSRDQLS 422
Query: 377 FAFVRDNMNPKLKLNMFEV 395
F +V + +NMF V
Sbjct: 423 FPYVLWRLKVLKNINMFPV 441
>At1g34550 hypothetical protein
Length = 812
Score = 133 bits (334), Expect = 2e-31
Identities = 94/310 (30%), Positives = 160/310 (51%), Gaps = 39/310 (12%)
Query: 117 FGGNLSTHLRFSYFDHQNDSTEVPCGFFKK--------FPISDSDRIAMEKCKNVVVVSA 168
F G+ S R F Q+ ++ CGF K F +++ D + +C ++ V S
Sbjct: 421 FAGHQSLQEREDSFVAQDK--KIHCGFVKGPKGSSSTGFDLTEDDTNYISRC-HIAVSSC 477
Query: 169 IFNDHDKIRQP--KGLGSKTLENVCFFIFIDDITLKRLEHHDLISRKSSEYKIGVWRVVK 226
IF + D++R P K + + +NVCF +F+D+IT++ L ++ IG+W++V
Sbjct: 478 IFGNSDRLRPPANKMISRLSRKNVCFIVFVDEITMQTLSAEGHAPDRAGF--IGLWKLVV 535
Query: 227 VSK------------EYLYLNPAMNGVIPKYLVHRLFPNSQFSIWIDAKLKLMVDPLLLI 274
V + + + G+ Y+ +L +++SIW+D+KL+L +DPLL++
Sbjct: 536 VKNLPYADMRRQGESHVITITLILMGLTSTYVFQQLHVENRYSIWLDSKLRLQLDPLLIL 595
Query: 275 HSLVISENADMAISKHPFYVHTMEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSK 334
+ + + AIS H + H + E +A + ++ + Q + Y +GL +N S
Sbjct: 596 EYFLWRKGHEYAISNH-YDRHCLWEEVAQNKKLNKYNHTVINQQFQFYKADGLTRFNASD 654
Query: 335 ----LPYVSDVPDSALILRKHGLGSNLFSCLVFNELEAFNPRDQLAFAFV-----RDNMN 385
LP S+VP+ + I+R H SNLFSCL FNE+E F PRDQL+FA+ R N +
Sbjct: 655 PFKLLP--SNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRMNPD 712
Query: 386 PKLKLNMFEV 395
L+MF++
Sbjct: 713 KPFNLHMFKI 722
>At1g35070 hypothetical protein
Length = 442
Score = 32.3 bits (72), Expect = 0.56
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 18/147 (12%)
Query: 1 MGKLITISKPLIIQSKLLCFSLFYLFTSLFLALYTISFQSKCLFRSSPFDPIQTSL---- 56
+GKL S + + +L S ++++ S + +LY SF SKCL +S+P+ SL
Sbjct: 266 VGKLAAFSDETLTRVRL-DKSPYFIYMSSYNSLY-FSFYSKCLEKSNPYALYLHSLSLGF 323
Query: 57 --------ISYPSSYGEH---KYAVSTTRSSCSSPVLFSDYRDVLKEIKNFRKSSTSSTK 105
IS S+ E + + C+ L D+ +E K F S + K
Sbjct: 324 RCLDLCGAISILSTCKERFPLAKLLYIALNRCAGIELIDDFNSFNRENKCFFDVSLMANK 383
Query: 106 MLGYMHGNADS-FGGNLSTHLRFSYFD 131
++G++ + FG T L Y D
Sbjct: 384 LIGHISASEPKCFGSYSETFLYEEYPD 410
>At5g04510 3-phosphoinositide-dependent protein kinase-1 (PDK1)
Length = 491
Score = 30.8 bits (68), Expect = 1.6
Identities = 27/101 (26%), Positives = 45/101 (43%), Gaps = 9/101 (8%)
Query: 110 MHGNADSFGGNLSTHLRFSYFDHQNDSTEVPCGFFKKFPISDSDRIAMEKCKNVVVVSAI 169
+ GN+ + G N+S FS+ Q + T F K + + ++ K K V A+
Sbjct: 14 LQGNSSN-GANVSRSKSFSFKAPQENFTSHDFEFGKIYGVGSYSKVVRAKKKETGTVYAL 72
Query: 170 FNDHDKIRQPKGLGSKTLENVCFFIFIDDITLKRLEHHDLI 210
KI K + T EN ++ ++ I L +LEH +I
Sbjct: 73 -----KIMDKKFI---TKENKTAYVKLERIVLDQLEHPGII 105
>At4g14210 phytoene dehydrogenase precursor (phytoene desaturase)
Length = 566
Score = 30.4 bits (67), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (57%)
Query: 258 IWIDAKLKLMVDPLLLIHSLVISENADMAISKHPFY 293
IW D KLK D LL S ++S ADM+++ +Y
Sbjct: 396 IWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYY 431
>At4g01400 hypothetical protein
Length = 1117
Score = 28.9 bits (63), Expect = 6.1
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 24 YLFTSLFLALYT-ISFQSKCLFRSSPFDPIQTSLISYPSSYGEHKYAVSTTRSSCSSPVL 82
Y F ++F L + +S S+ LF SS + ++S P S V +S S P+L
Sbjct: 7 YDFAAVFRHLTSPLSTSSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLL 66
Query: 83 FSDYRDVLKEIKNFRKSSTS 102
+ D + NFR S +S
Sbjct: 67 AKEIFDYASQQPNFRHSRSS 86
>At5g13390 unknown protein
Length = 1126
Score = 28.5 bits (62), Expect = 8.0
Identities = 18/70 (25%), Positives = 31/70 (43%), Gaps = 10/70 (14%)
Query: 250 LFPNSQFSIWIDAKLKLMVDPLLLIHSLVISENADMAISKHPFYVHTMEEAMATARW--- 306
LF +S+ +W+ A L L V P LL++ + E + A P+ + +A + W
Sbjct: 572 LFLSSKSIVWVSAALLLAVSPPLLLYKM-CREKSKSASKMKPWQGYAHAVVVAVSVWFCR 630
Query: 307 ------KKWW 310
+WW
Sbjct: 631 ETIFDALQWW 640
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,326,824
Number of Sequences: 26719
Number of extensions: 439448
Number of successful extensions: 1057
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1028
Number of HSP's gapped (non-prelim): 13
length of query: 456
length of database: 11,318,596
effective HSP length: 103
effective length of query: 353
effective length of database: 8,566,539
effective search space: 3023988267
effective search space used: 3023988267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0265.9