BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0265.5
         (404 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g34560 katanin like protein                                        555  e-158
At1g80350 CAD ATPase (AAA1)                                           279  2e-75
At2g27600 putative AAA-type ATPase                                    261  4e-70
At3g27120 spastin protein, putative                                   235  4e-62
At3g19740 ATPase, putative                                            218  4e-57
At1g50140 hypothetical protein, 5' partial                            214  7e-56
At4g02470                                                             213  1e-55
At1g64110 unknown protein                                             209  3e-54
At4g24850 unknown protein (At4g24850)                                 207  1e-53
At1g02890 hypothetical protein                                        200  1e-51
At4g28000 putative protein                                            197  1e-50
At2g45500 hypothetical protein                                        189  2e-48
At5g53540 26S proteasome regulatory particle chain RPT6-like pro...   188  4e-48
At4g27680 unknown protein                                             186  3e-47
At5g03340 transitional endoplasmic reticulum ATPase                   183  1e-46
At3g53230 CDC48 - like protein                                        181  5e-46
At3g09840 putative transitional endoplasmic reticulum ATPase          180  1e-45
At3g56690 calmodulin-binding protein                                  163  2e-40
At5g43010 26S proteasome AAA-ATPase subunit RPT4a (gb|AAF22524.1)     154  8e-38
At1g45000 26S proteasome AAA-ATPase subunit RPT4a like protein        154  8e-38

>At2g34560 katanin like protein
          Length = 384

 Score =  555 bits (1431), Expect = e-158
 Identities = 289/409 (70%), Positives = 329/409 (79%), Gaps = 30/409 (7%)

Query: 1   MADEEPMPTRWSFQDFKLYYDSKFGRKKV----VQNGENADKAVGNGSSMSVVSNGNVHS 56
           MA +EP  TRWSF          FGRKK+    V N +  +    NG++  V +N +  +
Sbjct: 1   MATDEPSQTRWSFL---------FGRKKLPEEDVSNKDQPEDGSSNGNNGDVNNNSSPVT 51

Query: 57  KRSSDMAIYEQLRSQGQNGIHTNDVSPNNMDERPQKSLLPPFESAEMRTLAESLSRDIIR 116
            +  + A+         NG        N + E+P+KS+ PPFESAE RTLAESLSRDIIR
Sbjct: 52  NQDGNTAL--------ANG--------NVIREKPKKSMFPPFESAETRTLAESLSRDIIR 95

Query: 117 GSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKA 176
           G+P++KWESIKGLENAK+LLKEAVVMPIKYP YF GLL+PWKGILLFGPPGTGKTMLAKA
Sbjct: 96  GNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKA 155

Query: 177 VATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRG-EA 235
           VATEC TTFFNISASSVVSKWRGDSEKL++VLF LARHHAPSTIFLDEIDAIISQRG E 
Sbjct: 156 VATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEG 215

Query: 236 RSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPE 295
           RSEHEASRRLKTELLIQMDGL +T+ELVFVLAATNLPWELDAAMLRRLEKRILVPLP+PE
Sbjct: 216 RSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPE 275

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQRED 355
           AR  MFE L+P QP +E +P+D+LV ++EGYSGSDIR+LCKE AMQPLRR ++ LE RED
Sbjct: 276 ARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILEDRED 335

Query: 356 LVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADYGSQILQ 404
           +VPE+ELPK+GPI PEDI  AL NTRPSAHLHAH YDKFN DYGSQIL+
Sbjct: 336 VVPEDELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDYGSQILK 384


>At1g80350 CAD ATPase (AAA1)
          Length = 523

 Score =  279 bits (713), Expect = 2e-75
 Identities = 149/368 (40%), Positives = 229/368 (61%), Gaps = 21/368 (5%)

Query: 41  GNGSSMSVVSNGNVHSKRSSDMAIYEQLRSQGQNGIHTNDVSPNNMDERPQKSLLPPFES 100
           G G + S  + G   S      A  +  +++  NG   +  S   + E P + L      
Sbjct: 168 GRGGATSKSTAGARSSTAGKKGAASKSNKAESMNGDAEDGKSKRGLYEGPDEDL------ 221

Query: 101 AEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGI 160
                 A  L RD++  +P V+W+ + GL  AKRLL+EAVV+P+  P+YF G+  PWKG+
Sbjct: 222 ------AAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGV 275

Query: 161 LLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTI 220
           L+FGPPGTGKT+LAKAVATEC TTFFN+S++++ SKWRG+SE++V+ LF LAR +APSTI
Sbjct: 276 LMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTI 335

Query: 221 FLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRT-------DELVFVLAATNLPW 273
           F+DEID++ + RG    EHE+SRR+K+ELL+Q+DG++ T        ++V VLAATN PW
Sbjct: 336 FIDEIDSLCNSRG-GSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPW 394

Query: 274 ELDAAMLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRL 333
           ++D A+ RRLEKRI +PLP+ E+R A+    L        +  + +  +TEGYSG D+  
Sbjct: 395 DIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTN 454

Query: 334 LCKEVAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYD 392
           +C++ +M  +RR ++   + E     ++     P+   D + A++  +PS +     K++
Sbjct: 455 VCRDASMNGMRRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

Query: 393 KFNADYGS 400
           K+ +++GS
Sbjct: 515 KWLSEFGS 522


>At2g27600 putative AAA-type ATPase
          Length = 435

 Score =  261 bits (668), Expect = 4e-70
 Identities = 135/282 (47%), Positives = 190/282 (66%), Gaps = 4/282 (1%)

Query: 99  ESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK 158
           E  E   L   L+  I+R  P++KW  + GLE+AK+ L+EAV++P+K+P++FTG   PW+
Sbjct: 107 EDPEQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWR 166

Query: 159 GILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPS 218
             LL+GPPGTGK+ LAKAVATE  +TFF++S+S +VSKW G+SEKLV  LF++AR  APS
Sbjct: 167 AFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPS 226

Query: 219 TIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAA 278
            IF+DEID++   RGE  +E EASRR+KTELL+QM G+   DE V VLAATN P+ LD A
Sbjct: 227 IIFVDEIDSLCGTRGEG-NESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQA 285

Query: 279 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIP-YDLLVNQTEGYSGSDIRLLCKE 337
           + RR +KRI +PLPE +AR  MF+  L   P   + P ++ L  +TEG+SGSD+ +  K+
Sbjct: 286 IRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVKD 345

Query: 338 VAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKN 379
           V  +P+R+    +   +   P+      GP  P  IQ  +++
Sbjct: 346 VLFEPVRKTQDAMFFFKS--PDGTWMPCGPRHPGAIQTTMQD 385


>At3g27120 spastin protein, putative
          Length = 327

 Score =  235 bits (599), Expect = 4e-62
 Identities = 131/301 (43%), Positives = 189/301 (62%), Gaps = 14/301 (4%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 165
           L E +S +I+   P+V+W+ I GLE+AK+ + E V+ P+  P  F G  SP KG+LLFGP
Sbjct: 32  LIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGP 91

Query: 166 PGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEI 225
           PGTGKTM+ KA+A E K TFF ISASS+ SKW G+ EKLV+ LF +A    P+ IF+DEI
Sbjct: 92  PGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEI 151

Query: 226 DAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEK 285
           D+++SQR ++  EHE+SRRLKT+ LI+M+G     E + ++ ATN P ELD A  RRL K
Sbjct: 152 DSLLSQR-KSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTK 210

Query: 286 RILVPLPEPEARVAMFEELLPPQ-----PDEESIPYDLLVNQTEGYSGSDIRLLCKEVAM 340
           R+ +PLP  EAR  + + LL         D++    +++ N TEGYSGSD++ L K+  M
Sbjct: 211 RLYIPLPSSEARAWIIQNLLKKDGLFTLSDDD---MNIICNLTEGYSGSDMKNLVKDATM 267

Query: 341 QPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKFNADYG 399
            PLR  + +     +L  ++    +  +  +D + AL+  RPS +      Y+ +N  +G
Sbjct: 268 GPLREALKRGIDITNLTKDD----MRLVTLQDFKDALQEVRPSVSQNELGIYENWNNQFG 323

Query: 400 S 400
           S
Sbjct: 324 S 324


>At3g19740 ATPase, putative
          Length = 439

 Score =  218 bits (556), Expect = 4e-57
 Identities = 124/296 (41%), Positives = 181/296 (60%), Gaps = 10/296 (3%)

Query: 110 LSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPG 167
           +S  +  G   VK++ I  LE+ K+ L E V++P++ P+ FT   LL P KGILLFGPPG
Sbjct: 136 VSAVVAPGEIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPG 195

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
           TGKT+LAKA+ATE    F +I+ S++ SKW GD+EKL K LF  A   AP  IF+DE+D+
Sbjct: 196 TGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDS 255

Query: 228 IISQRGEARSEHEASRRLKTELLIQMDGLTRTD-ELVFVLAATNLPWELDAAMLRRLEKR 286
           ++  RG A  EHEA+RR++ E +   DGL   D + + +L ATN P++LD A++RRL +R
Sbjct: 256 LLGARGGA-FEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRR 314

Query: 287 ILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRL 346
           I V LP+ E R+ + +  L P+  E    +D L  +TEGYSGSD++ LC   A +P++ L
Sbjct: 315 IYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAYRPVQEL 374

Query: 347 MSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHA---HKYDKFNADYG 399
           +   E+ +D V     P + P+  +D   +     PS    A   ++  K+N  YG
Sbjct: 375 LQ--EENKDSVTNAS-PDLRPLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 427


>At1g50140 hypothetical protein, 5' partial
          Length = 601

 Score =  214 bits (545), Expect = 7e-56
 Identities = 122/296 (41%), Positives = 178/296 (59%), Gaps = 10/296 (3%)

Query: 110 LSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPG 167
           +S  +  G   VK+E I  LE+ K+ L E V++P++ P+ F    LL P KGILLFGPPG
Sbjct: 298 VSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPG 357

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
           TGKT+LAKA+ATE    F +I+ S++ SKW GD+EKL K LF  A   AP  IF+DEID+
Sbjct: 358 TGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDS 417

Query: 228 IISQRGEARSEHEASRRLKTELLIQMDGLTRTD-ELVFVLAATNLPWELDAAMLRRLEKR 286
           ++  RG   SEHEA+RR++ E +   DGL   D + + +L ATN P++LD A++RRL +R
Sbjct: 418 LLGARG-GSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIRRLPRR 476

Query: 287 ILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRL 346
           I V LP+ E R+ + +  L P+  E    ++ L  +TEGYSGSD++ LC   A +P++ L
Sbjct: 477 IYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQEL 536

Query: 347 MSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHA---HKYDKFNADYG 399
              L++ +     E  P +  +  +D   +     PS    A   ++  K+N  YG
Sbjct: 537 ---LQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 589


>At4g02470
          Length = 371

 Score =  213 bits (543), Expect = 1e-55
 Identities = 120/282 (42%), Positives = 171/282 (60%), Gaps = 5/282 (1%)

Query: 108 ESLSRDIIRGSP-DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFG 164
           + L  D+I  S   V ++ I  LEN K  LKE V++P++ P+ F    L  P KGILLFG
Sbjct: 52  KKLLSDVIPPSDIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFG 111

Query: 165 PPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDE 224
           PPGTGKTMLAKAVATE    F NIS SS+ SKW G+ EK VK +F LA   APS IF+DE
Sbjct: 112 PPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDE 171

Query: 225 IDAIISQRGEARSEHEASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRL 283
           +D+++ +R E   EHEA R++K E ++  DGL T+  E V VLAATN P++LD A++RRL
Sbjct: 172 VDSMLGRR-ENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRL 230

Query: 284 EKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
            +R++V LP+   R  +   +L  +     +  + + N T+GYSGSD++ LC   A  P+
Sbjct: 231 PRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPI 290

Query: 344 RRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAH 385
           R ++ + ++ +     E  P        D+++   N   +AH
Sbjct: 291 REILEKEKKEKTAAQAENRPTPPLYSCTDVRSLTMNDFKAAH 332


>At1g64110 unknown protein
          Length = 824

 Score =  209 bits (531), Expect = 3e-54
 Identities = 124/304 (40%), Positives = 180/304 (58%), Gaps = 22/304 (7%)

Query: 90  PQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKY 149
           P+   + P    E R   E +  + I    +V ++ I  L+  K  L+E V++P++ P  
Sbjct: 486 PKAPEVAPDNEFEKRIRPEVIPAEEI----NVTFKDIGALDEIKESLQELVMLPLRRPDL 541

Query: 150 FTG-LLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVL 208
           FTG LL P +GILLFGPPGTGKTMLAKA+A E   +F N+S S++ SKW G+ EK V+ L
Sbjct: 542 FTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRAL 601

Query: 209 FQLARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGL-TRTDELVFVLA 267
           F LA   +P+ IF+DE+D+++ QR     EHEA R++K E +   DGL T+  E + VLA
Sbjct: 602 FTLASKVSPTIIFVDEVDSMLGQRTRV-GEHEAMRKIKNEFMSHWDGLMTKPGERILVLA 660

Query: 268 ATNLPWELDAAMLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYS 327
           ATN P++LD A++RR E+RI+V LP  E R  +   LL  +  +E++ Y  L   TEGY+
Sbjct: 661 ATNRPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYT 720

Query: 328 GSDIRLLCKEVAMQPLRRLMSQ--------LEQR-------EDLVPEEELPKVGPIRPED 372
           GSD++ LC   A +P+R L+ Q         +QR       ED   EE +  + P+  +D
Sbjct: 721 GSDLKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAGEEDEGKEERVITLRPLNRQD 780

Query: 373 IQAA 376
            + A
Sbjct: 781 FKEA 784


>At4g24850 unknown protein (At4g24850)
          Length = 442

 Score =  207 bits (526), Expect = 1e-53
 Identities = 111/249 (44%), Positives = 160/249 (63%), Gaps = 4/249 (1%)

Query: 110 LSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFGPPG 167
           LS  I+    DV ++ I  LE  K +LKE V++P++ P+ F    L  P KGILLFGPPG
Sbjct: 126 LSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPG 185

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
           TGKTMLAKAVA E    F NIS SS+ SKW G+ EK VK +F LA   +PS IF+DE+D+
Sbjct: 186 TGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDS 245

Query: 228 IISQRGEARSEHEASRRLKTELLIQMDGLTRTD-ELVFVLAATNLPWELDAAMLRRLEKR 286
           ++ +R   R EHEASR++K E ++  DGLT  + E V VLAATN P++LD A++RRL +R
Sbjct: 246 MLGRREHPR-EHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIRRLPRR 304

Query: 287 ILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRL 346
           ++V LP+   R  + + +L  +     +    + + T GYSGSD++ LC   A +P++ +
Sbjct: 305 LMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAHRPIKEI 364

Query: 347 MSQLEQRED 355
           + + ++  D
Sbjct: 365 LEKEKRERD 373


>At1g02890 hypothetical protein
          Length = 1240

 Score =  200 bits (508), Expect = 1e-51
 Identities = 118/258 (45%), Positives = 162/258 (62%), Gaps = 10/258 (3%)

Query: 108  ESLSRDIIRGSP-DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTG--LLSPWKGILLFG 164
            + L  D+I  S   V +  I  LEN K  LKE V++P++ P+ F    L  P KGILLFG
Sbjct: 925  KKLLSDVIPPSDIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFG 984

Query: 165  PPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDE 224
            PPGTGKTMLAKAVATE    F NIS SS+ SK     EK VK +F LA   APS IF+DE
Sbjct: 985  PPGTGKTMLAKAVATEAGANFINISMSSITSK----GEKYVKAVFSLASKIAPSVIFVDE 1040

Query: 225  IDAIISQRGEARSEHEASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRL 283
            +D+++ +R E   EHEA R++K E +I  DGL T+  E V VLAATN P++LD A++RRL
Sbjct: 1041 VDSMLGRR-ENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRL 1099

Query: 284  EKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
             +R++V LP+   R  +   +L  +   E +  + + N T+GYSGSD++ LC   A  P+
Sbjct: 1100 PRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPI 1159

Query: 344  RRLMSQLEQREDLVPEEE 361
            R ++ + E++E  V + E
Sbjct: 1160 REILEK-EKKERSVAQAE 1176


>At4g28000 putative protein
          Length = 726

 Score =  197 bits (500), Expect = 1e-50
 Identities = 103/231 (44%), Positives = 150/231 (64%), Gaps = 4/231 (1%)

Query: 121 VKWESIKGLENAKRLLKEAVVMPIKYPKYFTG-LLSPWKGILLFGPPGTGKTMLAKAVAT 179
           V +  I  L+  K  L+E V++P++ P  F G LL P +GILLFGPPGTGKTM+AKA+A 
Sbjct: 411 VTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIAN 470

Query: 180 ECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARSEH 239
           E   +F N+S S++ SKW G+ EK V+ LF LA   +P+ IF+DE+D+++ QR     EH
Sbjct: 471 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRV-GEH 529

Query: 240 EASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARV 298
           EA R++K E +   DGL +   + + VLAATN P++LD A++RR E+RI+V LP  E+R 
Sbjct: 530 EAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESRE 589

Query: 299 AMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQ 349
            +   LL  +   E++ +  L   T+GYSGSD++  C   A +P+R L+ Q
Sbjct: 590 KILRTLLSKE-KTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVRELIKQ 639


>At2g45500 hypothetical protein
          Length = 481

 Score =  189 bits (480), Expect = 2e-48
 Identities = 119/268 (44%), Positives = 152/268 (56%), Gaps = 56/268 (20%)

Query: 106 LAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWK-----GI 160
           L E ++  I+  SP VKW+ + GL  AK+ L E V++P K    FTGL  P +     G+
Sbjct: 198 LVEMINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARVTSLLGL 257

Query: 161 LLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTI 220
           LLFGPPG GKTMLAKAVA+E + TFFN+SASS+ SKW                       
Sbjct: 258 LLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKW----------------------- 294

Query: 221 FLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLT-RTDELVFVLAATNLPWELDAAM 279
               ID+I+S R  + SE+EASRRLK+E LIQ DG+T   D+LV ++ ATN P ELD A+
Sbjct: 295 ----IDSIMSTR--STSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAV 348

Query: 280 LRRLEKRILVPLPEPEARVAMFEELLPPQPDEESI-PYDLLVNQTEG------------- 325
           LRRL KRI VPLP+   R  +F+  L  QP   S    D +V +TEG             
Sbjct: 349 LRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGKLYRLCIKKHRFI 408

Query: 326 -------YSGSDIRLLCKEVAMQPLRRL 346
                  YSGSD++ LC+E AM P+R L
Sbjct: 409 SQVTDKRYSGSDLQALCEEAAMMPIREL 436


>At5g53540 26S proteasome regulatory particle chain RPT6-like
           protein
          Length = 403

 Score =  188 bits (478), Expect = 4e-48
 Identities = 115/275 (41%), Positives = 164/275 (58%), Gaps = 22/275 (8%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLAKAV 177
           DV++ SI GLE+ K+ L E V++P+K P+ F    LL P KG+LL+GPPGTGKTMLAKA+
Sbjct: 83  DVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 142

Query: 178 ATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARS 237
           A E +  F N+  S+++SKW GD++KLV  +F LA    P+ IF+DE+D+ + QR    +
Sbjct: 143 ARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQR--RST 200

Query: 238 EHEASRRLKTELLIQMDGLTRTDE--LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPE 295
           ++EA   +KTE +   DG T TD+   V VLAATN P ELD A+LRR  +   + +P+ +
Sbjct: 201 DNEAMSNMKTEFMALWDGFT-TDQNARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQ 259

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQRED 355
            R  + + +L  +  E  I YD +    E Y+GSDI  LCK+ A  P+         RE 
Sbjct: 260 ERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPI---------REI 310

Query: 356 LVPEEELPKVGPIRP------EDIQAALKNTRPSA 384
           L  E+E  +V   RP      E + A  K T+ +A
Sbjct: 311 LEAEKEGKRVSVPRPLTQLDLEKVLATSKKTQVAA 345


>At4g27680 unknown protein
          Length = 398

 Score =  186 bits (471), Expect = 3e-47
 Identities = 102/231 (44%), Positives = 144/231 (62%), Gaps = 5/231 (2%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFT--GLLSPWKGILLFGPPGTGKTMLAKAV 177
           DV++ SI GLE  K+ L E V++P+K P+ F    LL P KG+LL+GPPGTGKTMLAKA+
Sbjct: 80  DVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 139

Query: 178 ATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQRGEARS 237
           A E    F N+  S+++SKW GD++KLV  +F LA    P+ IF+DE+++ + QR    +
Sbjct: 140 AKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQR--RST 197

Query: 238 EHEASRRLKTELLIQMDGL-TRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEA 296
           +HEA   +KTE +   DG  T     V VLAATN P ELD A+LRRL +   + +P+   
Sbjct: 198 DHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRE 257

Query: 297 RVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLM 347
           R  + +  L  +  E  I +D +    EGY+GSDI  LCK+ A  P+R ++
Sbjct: 258 RAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREIL 308


>At5g03340 transitional endoplasmic reticulum ATPase
          Length = 810

 Score =  183 bits (465), Expect = 1e-46
 Identities = 107/303 (35%), Positives = 170/303 (55%), Gaps = 22/303 (7%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V WE I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 465 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 524

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 525 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 584

Query: 228 IISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           I +QRG +  +   A+ R+  +LL +MDG+    + VF++ ATN P  +D+A+LR  RL+
Sbjct: 585 IATQRGNSAGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRLD 643

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL- 343
           + I +PLP+ ++R+ +F+  L   P  + +    L   T+G+SG+DI  +C+      + 
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703

Query: 344 -----------RRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKY 391
                      RR  +     ED+V +E    V  IR    + ++K  R S +     KY
Sbjct: 704 ENIEKDIENERRRSQNPEAMEEDMVDDE----VSEIRAAHFEESMKYARRSVSDADIRKY 759

Query: 392 DKF 394
             F
Sbjct: 760 QAF 762



 Score =  154 bits (390), Expect = 6e-38
 Identities = 94/280 (33%), Positives = 156/280 (55%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 191 EPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 250

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 311 SIAPKREKTNGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 367

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR 427

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  +D +  E L  +  +  E    AL N+ PSA
Sbjct: 428 EKMDVIDLEDDSIDAEILNSMA-VSNEHFHTALGNSNPSA 466


>At3g53230 CDC48 - like protein
          Length = 815

 Score =  181 bits (460), Expect = 5e-46
 Identities = 105/297 (35%), Positives = 169/297 (56%), Gaps = 12/297 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V WE I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 466 SALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F +I    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 526 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585

Query: 228 IISQRGEARSE-HEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           I +QRG +  +   A+ R+  +LL +MDG+    + VF++ ATN P  +D A+LR  RL+
Sbjct: 586 IATQRGNSVGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLD 644

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I +PLP+ E+R  +F+  L   P  + +    L   T+G+SG+DI  +C+      +R
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704

Query: 345 RLMSQLEQRE------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKF 394
             + +  ++E          EE+  ++  I+    + ++K  R S +     KY  F
Sbjct: 705 ENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAF 761



 Score =  152 bits (385), Expect = 2e-37
 Identities = 93/280 (33%), Positives = 157/280 (55%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      +V ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 192 EPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 312 SIAPKREKTHGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 368

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 369 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  ++ +  E L  +  +  +  Q AL N+ PSA
Sbjct: 429 EKMDVIDLDDEEIDAEILNSMA-VSNDHFQTALGNSNPSA 467


>At3g09840 putative transitional endoplasmic reticulum ATPase
          Length = 809

 Score =  180 bits (456), Expect = 1e-45
 Identities = 102/299 (34%), Positives = 170/299 (56%), Gaps = 14/299 (4%)

Query: 109 SLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPG 167
           S  R+ +   P+V W  I GLEN KR L+E V  P+++P+ F    +SP KG+L +GPPG
Sbjct: 465 SALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 524

Query: 168 TGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDA 227
            GKT+LAKA+A EC+  F ++    +++ W G+SE  V+ +F  AR  AP  +F DE+D+
Sbjct: 525 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 584

Query: 228 IISQR--GEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RL 283
           I +QR  G       A+ R+  +LL +MDG+    + VF++ ATN P  +D+A+LR  RL
Sbjct: 585 IATQRGGGSGGDGGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRL 643

Query: 284 EKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPL 343
           ++ I +PLP+ ++R+ +F+  L   P  + +    L   T+G+SG+DI  +C+      +
Sbjct: 644 DQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAI 703

Query: 344 RRLMSQLEQRE-------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKF 394
           R  + +  ++E       + + E+ + +V  I+    + ++K  R S +     KY  F
Sbjct: 704 RENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAF 762



 Score =  156 bits (394), Expect = 2e-38
 Identities = 95/280 (33%), Positives = 156/280 (54%), Gaps = 7/280 (2%)

Query: 108 ESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPP 166
           E + R+      DV ++ + G+      ++E V +P+++P+ F  + + P KGILL+GPP
Sbjct: 191 EPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 250

Query: 167 GTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEID 226
           G+GKT++A+AVA E    FF I+   ++SK  G+SE  ++  F+ A  +APS IF+DEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310

Query: 227 AIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLE 284
           +I  +R +   E E  RR+ ++LL  MDGL ++   V V+ ATN P  +D A+ R  R +
Sbjct: 311 SIAPKREKTNGEVE--RRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFD 367

Query: 285 KRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLR 344
           + I + +P+   R+ +           E +  + +   T GY G+D+  LC E A+Q +R
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR 427

Query: 345 RLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 384
             M  ++  +D +  E L  +  +  E    AL N+ PSA
Sbjct: 428 EKMDVIDLEDDSIDAEILNSMA-VTNEHFHTALGNSNPSA 466


>At3g56690 calmodulin-binding protein
          Length = 1022

 Score =  163 bits (412), Expect = 2e-40
 Identities = 100/257 (38%), Positives = 147/257 (56%), Gaps = 5/257 (1%)

Query: 98  FESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSP 156
           FE+A+ + +  S  R++I   P V WE + G    K  L EAV  P K+   F  +   P
Sbjct: 699 FENAKTK-IRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRP 757

Query: 157 WKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHA 216
             GIL+FGPPG  KT++A+AVA+E K  F  +    + SKW G+SEK V+ LF  AR +A
Sbjct: 758 PSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANA 817

Query: 217 PSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELD 276
           PS IF DEID++ S RG+       S R+ ++LL+++DGL +    V V+AATN P ++D
Sbjct: 818 PSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVG-VTVIAATNRPDKID 876

Query: 277 AAMLR--RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLL 334
           +A+LR  R ++ + V  P    R A+ +  L   P    I    L + T+GY+G+DI L+
Sbjct: 877 SALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLI 936

Query: 335 CKEVAMQPLRRLMSQLE 351
           C+E A+  L   +   E
Sbjct: 937 CREAAIAALEESLEMEE 953



 Score =  125 bits (314), Expect = 4e-29
 Identities = 78/213 (36%), Positives = 120/213 (55%), Gaps = 7/213 (3%)

Query: 154 LSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFQLAR 213
           L P KG+L+ GPPGTGKT LA+  A      FF+++   ++S++ G+SEK +  +F+ A 
Sbjct: 415 LRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSAS 474

Query: 214 HHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPW 273
           +  P+ +F+D++DAI   R E     E S+R+   LL  MDG++RTD +V V+AATN P 
Sbjct: 475 NATPAVVFIDDLDAIAPARKE--GGEELSQRMVATLLNLMDGISRTDGVV-VIAATNRPD 531

Query: 274 ELDAAMLR--RLEKRILVPLPEPEARVAMFEELLPPQPDE-ESIPYDLLVNQTEGYSGSD 330
            ++ A+ R  RL++ I + +P    R  +   +L        +I  + L   T G+ G+D
Sbjct: 532 SIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGAD 591

Query: 331 IRLLCKEVAMQPLRRLMSQLEQREDLVPEEELP 363
           +  LC E A   LRR + Q     +L P EE P
Sbjct: 592 LSALCCEAAFVCLRRHLDQSSSSSNL-PLEEAP 623


>At5g43010 26S proteasome AAA-ATPase subunit RPT4a (gb|AAF22524.1)
          Length = 399

 Score =  154 bits (389), Expect = 8e-38
 Identities = 92/286 (32%), Positives = 161/286 (56%), Gaps = 25/286 (8%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 178
           ++ + ++ GL +  R L+E++ +P+  P+ F  + + P KG+LL+GPPGTGKT+LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query: 179 TECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQR-GEARS 237
           +     F  + +S+++ K+ G+S +L++ +F  AR H P  IF+DEIDAI  +R  E  S
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254

Query: 238 EHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPE 295
                +R   ELL Q+DG     ++  ++ ATN P  LD A+LR  RL+++I +PLP  +
Sbjct: 255 ADREIQRTLMELLNQLDGFDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQRED 355
           +R+ + +           I Y+ +V   EG++G+D+R +C E  M  +R       +R+ 
Sbjct: 314 SRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIR------AERDY 367

Query: 356 LVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADYGSQ 401
           ++ E+ +  V  +      +  K    S+H        +NAD+G +
Sbjct: 368 VIHEDFMKAVRKL------SEAKKLESSSH--------YNADFGKE 399


>At1g45000 26S proteasome AAA-ATPase subunit RPT4a like protein
          Length = 399

 Score =  154 bits (389), Expect = 8e-38
 Identities = 92/286 (32%), Positives = 162/286 (56%), Gaps = 25/286 (8%)

Query: 120 DVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGL-LSPWKGILLFGPPGTGKTMLAKAVA 178
           ++ + ++ GL +  R L+E++ +P+  P+ F  + + P KG+LL+GPPGTGKT+LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query: 179 TECKTTFFNISASSVVSKWRGDSEKLVKVLFQLARHHAPSTIFLDEIDAIISQR-GEARS 237
           +     F  + +S+++ K+ G+S +L++ +F  AR H P  IF+DEIDAI  +R  E  S
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254

Query: 238 EHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLR--RLEKRILVPLPEPE 295
                +R   ELL Q+DG  +  ++  ++ ATN P  LD A+LR  RL+++I +PLP  +
Sbjct: 255 ADREIQRTLMELLNQLDGFDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313

Query: 296 ARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQPLRRLMSQLEQRED 355
           +R+ + +           I Y+ +V   EG++G+D+R +C E  M  +R       +R+ 
Sbjct: 314 SRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIR------AERDY 367

Query: 356 LVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADYGSQ 401
           ++ E+ +  V  +      +  K    S+H        +NAD+G +
Sbjct: 368 VIHEDFMKAVRKL------SEAKKLESSSH--------YNADFGKE 399


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.315    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,264,197
Number of Sequences: 26719
Number of extensions: 399097
Number of successful extensions: 1688
Number of sequences better than 10.0: 161
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 189
length of query: 404
length of database: 11,318,596
effective HSP length: 102
effective length of query: 302
effective length of database: 8,593,258
effective search space: 2595163916
effective search space used: 2595163916
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)