BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0258a.2
(167 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34630 unknown protein 80 4e-16
At5g48420 unknown protein 46 1e-05
At1g03530 unknown protein 37 0.004
At5g55660 putative protein 37 0.006
At1g12830 unknown protein 37 0.006
At5g07170 putative protein 36 0.011
At1g64500 unknown protein 36 0.011
At5g22640 unknown protein 35 0.014
At4g21800 unknown protein 34 0.032
At2g19480 putative nucleosome assembly protein 34 0.042
At1g69070 hypothetical protein 34 0.042
At5g52830 unknown protein 33 0.055
At3g12390 unknown protein 33 0.055
At1g58210 hypothetical protein 33 0.055
At5g57685 putative protein 33 0.072
At1g72440 hypothetical protein 33 0.072
At1g48400 33 0.072
At1g47970 Unknown protein (T2J15.12) 33 0.072
At1g17680 unknown protein 33 0.072
At4g27310 putative protein 33 0.093
>At4g34630 unknown protein
Length = 199
Score = 80.5 bits (197), Expect = 4e-16
Identities = 42/81 (51%), Positives = 54/81 (65%), Gaps = 2/81 (2%)
Query: 84 YLHGYAYEDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQRMKKLGKRACSKMKNSK 143
Y G Y D +++ + DD DLD+ELVP V K+GRQRM+KLGKRA +K+ SK
Sbjct: 118 YSVGITYGDSVNDDGEEDREYDDSYDLDEELVPRSVSKKVGRQRMRKLGKRAIAKVYASK 177
Query: 144 RSPYLFVRPGCVGGKHGLGLK 164
SP F++PG V GKHGLG+K
Sbjct: 178 ISP--FLKPGIVRGKHGLGMK 196
>At5g48420 unknown protein
Length = 142
Score = 45.8 bits (107), Expect = 1e-05
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 90 YEDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQRMKKLGKRACSKMKNSKRSPYLF 149
Y+ DEE D +D DD D ELV QR++K GKR K K+ Y +
Sbjct: 75 YDTDEEDDFDYYDDLDD----DHELVKI--------QRIRKTGKRTFWKNVTLKKKKYSY 122
Query: 150 --VRPGCVGGKHGLGLK 164
++PGCV GKHGL +K
Sbjct: 123 SQLKPGCVHGKHGLDIK 139
>At1g03530 unknown protein
Length = 801
Score = 37.4 bits (85), Expect = 0.004
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 34 DAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHYLHGYAYEDD 93
D+ +E+E D+++ D EE K + ++ + E++ + L +DD
Sbjct: 260 DSSSSEEEESDEDESDK---EENKKEEKFEHMVVGKEDDLAGELEEGEIENLDEENGDDD 316
Query: 94 EEQVVDDEEDDDDRCDLDDELVPW 117
E DD++DDDD D +E+V W
Sbjct: 317 IEDEDDDDDDDDDDDDDVNEMVAW 340
>At5g55660 putative protein
Length = 759
Score = 36.6 bits (83), Expect = 0.006
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 22 DSLLQWELVDVVDAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVA---VVEID 78
D + + E V+ VD ++++E ++N+ + A EE +++ + D A V E +
Sbjct: 175 DDVDEAEKVENVDEDDKEEALKEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVAEPE 234
Query: 79 RQQYHYLHGYAYEDDEEQVVDDEEDDDDRC--DLDDELVPWEVGNKLGRQRMKKL-GKRA 135
+ ED EE+ D++ED+ + D +D+ + NK G+ + +K GK
Sbjct: 235 VEDKKTESKDENEDKEEEKEDEKEDEKEESNDDKEDKKEDIKKSNKRGKGKTEKTRGKTK 294
Query: 136 CSKMKN--SKRSPYLFVRP 152
+ K ++P+ RP
Sbjct: 295 SDEEKKDIEPKTPFFSDRP 313
>At1g12830 unknown protein
Length = 213
Score = 36.6 bits (83), Expect = 0.006
Identities = 26/86 (30%), Positives = 38/86 (43%), Gaps = 15/86 (17%)
Query: 33 VDAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHYLHGYAYED 92
V AEEEQE E D+ + D EE +++ D + D+ + + E
Sbjct: 91 VGAEEEQEDEEDEEEDDEEEEEEEEVV--------DRKGKGISREDKGKGKMIE--VEES 140
Query: 93 DEEQVVDDEEDD-----DDRCDLDDE 113
D+E DD+EDD DD D D+
Sbjct: 141 DDEDDSDDDEDDEGFDEDDESDFSDD 166
>At5g07170 putative protein
Length = 542
Score = 35.8 bits (81), Expect = 0.011
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 54 EEIKIIHQIRPVLPDP---DAVAVVEIDRQQYHYLHGYAYEDDEEQVVDDEEDDDDRCDL 110
E +KI I DP D+ + E D + H YA +DD + DDE+DDDD D
Sbjct: 70 ENMKIAAAIPSSQDDPLIDDSSSDEEDDSESTHC---YAADDDADDTDDDEDDDDDDDDD 126
Query: 111 DDE 113
DD+
Sbjct: 127 DDD 129
Score = 32.7 bits (73), Expect = 0.093
Identities = 18/43 (41%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQ--RMKKL 131
+DD++ DD++DDDD D DDE EV + G RM+K+
Sbjct: 122 DDDDDDDDDDDDDDDDDDDDDDESKDSEVEEEEGDDDLRMRKI 164
Score = 30.0 bits (66), Expect = 0.61
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
EDD++ DD++DDDD D DD+
Sbjct: 117 EDDDDDDDDDDDDDDDDDDDDDD 139
Score = 30.0 bits (66), Expect = 0.61
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DDE+ DD++DDDD D DD+
Sbjct: 114 DDDEDDDDDDDDDDDDDDDDDDD 136
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 121 DDDDDDDDDDDDDDDDDDDDDDD 143
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 120 DDDDDDDDDDDDDDDDDDDDDDD 142
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 118 DDDDDDDDDDDDDDDDDDDDDDD 140
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 119 DDDDDDDDDDDDDDDDDDDDDDD 141
>At1g64500 unknown protein
Length = 368
Score = 35.8 bits (81), Expect = 0.011
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 67 PDPDAVAVVEIDRQQYHYLHGYAYEDDEEQ----VVD--DEEDDDDRCDLDDELVPWEVG 120
P P + AV +++ Q +L + +EDDE+ V D DE+DDDD D DD WE
Sbjct: 20 PPPSSFAVFDVNAIQEPWLK-FEHEDDEKPPRSTVFDRLDEDDDDDDDDGDDAPKTWEEV 78
Query: 121 NKLGRQRMK 129
+K ++K
Sbjct: 79 SKSLETKLK 87
>At5g22640 unknown protein
Length = 871
Score = 35.4 bits (80), Expect = 0.014
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 15 QFLKVQDDSLLQWELVDVVDAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAV 74
Q L++ + + E ++ +D E +++++ ++ + + EE + + + PV + V
Sbjct: 611 QELELVEAEICLEEAIEDMDEELKKKEQEEEKKTEMGLTEEDEDV--LVPVYKEEKVVTA 668
Query: 75 VEIDRQQYHYLHGYAYEDDEEQVVDDEEDDDDRCDLDDELVPWEVGN 121
E ++ Y+DD+++ DD +DDDD D DD+L P G+
Sbjct: 669 KEKIQENKQE---EKYKDDDDEDDDDGDDDDDDDD-DDDLGPSSFGS 711
>At4g21800 unknown protein
Length = 379
Score = 34.3 bits (77), Expect = 0.032
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
EDDE+ V+DEED DD D DDE
Sbjct: 348 EDDEDFQVEDEEDSDDAIDEDDE 370
>At2g19480 putative nucleosome assembly protein
Length = 379
Score = 33.9 bits (76), Expect = 0.042
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQRMKKLGKRACSKMKNSKRSP 146
E+DEE DDEE+DD+ D ++E + K KK G+ ++ + +R P
Sbjct: 319 EEDEEDDEDDEEEDDEDDDEEEEADQGKKSKKKSSAGHKKAGRSQLAEGQAGERPP 374
Score = 29.3 bits (64), Expect = 1.0
Identities = 9/23 (39%), Positives = 19/23 (82%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
EDD++++ +D++++D+ D DDE
Sbjct: 307 EDDDDEIDEDDDEEDEEDDEDDE 329
Score = 27.7 bits (60), Expect = 3.0
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQRMKK 130
EDD+E+ DEEDD+D + DDE E G++ KK
Sbjct: 315 EDDDEE---DEEDDEDDEEEDDEDDDEEEEADQGKKSKKK 351
>At1g69070 hypothetical protein
Length = 901
Score = 33.9 bits (76), Expect = 0.042
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 19 VQDDSLLQWELVDVVDAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEID 78
V++D + + DV++ E+ + +D+ EE D D + +
Sbjct: 334 VEEDKPKRGWIDDVLEREDNVDNSESDEDEDSESEEE-----------EDDDGESDGGDE 382
Query: 79 RQQY-HYLHGYAYEDDEEQV-VDDEEDDDDRCDLDDELVPWEVGNKL 123
+Q+ H+L + DDE ++DEE+DDD D D+E V KL
Sbjct: 383 KQRKGHHLEDWEQSDDELGAELEDEEEDDDEEDDDEEDAELRVHKKL 429
>At5g52830 unknown protein
Length = 348
Score = 33.5 bits (75), Expect = 0.055
Identities = 12/26 (46%), Positives = 22/26 (84%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDELVP 116
E++EE+V +D+E+++D D+DD L+P
Sbjct: 294 EEEEEEVEEDDEEEEDDDDVDDLLIP 319
>At3g12390 unknown protein
Length = 203
Score = 33.5 bits (75), Expect = 0.055
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 92 DDEEQVVDDEEDDDDRCDLDDELVPWEVGNKLGRQRMKKLGKRACSKM 139
+D++ DD+ DDDD+ D + + + E G K + R +K ++A K+
Sbjct: 26 EDDDDNEDDDSDDDDKDDDEADGLDGEAGGKSKQSRSEKKSRKAMLKL 73
>At1g58210 hypothetical protein
Length = 1195
Score = 33.5 bits (75), Expect = 0.055
Identities = 39/134 (29%), Positives = 53/134 (39%), Gaps = 23/134 (17%)
Query: 31 DVVDAEEEQEQEPDQNQQ---DAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHYLHG 87
D D EE+E++ +N D PV + ++ + L D VV R
Sbjct: 149 DWEDYNEEEEEKKKKNVDISFDDIPVNRYQDLYSLEGCLKDKILDDVVGSLRDLVCQKSD 208
Query: 88 YAYEDDEEQVVDDEEDDDDRCDLDDELVPWEVGNK--------------LGRQRMKKLGK 133
A E VDD++DDDD D LV VG K +G++ GK
Sbjct: 209 KACEKSRVGDVDDDDDDDD----DKSLVSRVVGVKTRGMLRRREEYEASIGKRVATMSGK 264
Query: 134 R--ACSKMKNSKRS 145
R SK KN +RS
Sbjct: 265 RVVTVSKKKNRRRS 278
>At5g57685 putative protein
Length = 157
Score = 33.1 bits (74), Expect = 0.072
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 9/90 (10%)
Query: 27 WELVDVVDAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHYLH 86
W L +D EE Q +E D D P + ++PV P+ V+ + YL
Sbjct: 58 WRLSGYLDGEENQSRERDLEVGDVKPDKTA-----VKPVAL-PEKFLVIMAGNVKPTYL- 110
Query: 87 GYAYEDDEEQVVDDEEDDDDRCDLDDELVP 116
A + DD++D+DD + D++VP
Sbjct: 111 --ATPSVKTCTCDDDDDEDDDVEGSDQVVP 138
>At1g72440 hypothetical protein
Length = 1056
Score = 33.1 bits (74), Expect = 0.072
Identities = 42/141 (29%), Positives = 61/141 (42%), Gaps = 36/141 (25%)
Query: 28 ELVDVVDAE--EEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHY- 84
EL DV D + E + + + D + EEI+ +L D D AV E + +Y Y
Sbjct: 890 ELYDVNDGDGGENYDSDVEFEAGDESDNEEIE------NMLDDVDDNAVEE-EGGEYDYD 942
Query: 85 -LHGYAYEDDEEQVVDDEEDDDDRCDLDDELVPWEVGNKL-----------------GRQ 126
L G A EDDEE +V D D + D+D +L+ E N + GR
Sbjct: 943 DLDGVAGEDDEE-LVADVSDAEMDTDMDMDLIDDEDDNNVDDDGTGDGGDDDSDGDDGRS 1001
Query: 127 RMKKLGKRACSKMKNSKRSPY 147
+ KK K K ++SP+
Sbjct: 1002 KKKK-------KEKRKRKSPF 1015
>At1g48400
Length = 513
Score = 33.1 bits (74), Expect = 0.072
Identities = 15/46 (32%), Positives = 25/46 (53%)
Query: 68 DPDAVAVVEIDRQQYHYLHGYAYEDDEEQVVDDEEDDDDRCDLDDE 113
D D + + + + + Y Y DD++ DD++DDDD D DD+
Sbjct: 261 DFDLLVEARLSLRLWVSTNDYDYSDDDDDDDDDDDDDDDDDDDDDD 306
Score = 31.2 bits (69), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (70%)
Query: 86 HGYAYEDDEEQVVDDEEDDDDRCDLDDE 113
+ Y+ +DD++ DD++DDDD D DD+
Sbjct: 281 YDYSDDDDDDDDDDDDDDDDDDDDDDDD 308
Score = 30.0 bits (66), Expect = 0.61
Identities = 13/37 (35%), Positives = 20/37 (53%)
Query: 77 IDRQQYHYLHGYAYEDDEEQVVDDEEDDDDRCDLDDE 113
+ Y Y +DD++ DD++DDDD D DD+
Sbjct: 276 VSTNDYDYSDDDDDDDDDDDDDDDDDDDDDDDDDDDD 312
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 297 DDDDDDDDDDDDDDDDDDDDDDD 319
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 303 DDDDDDDDDDDDDDDDDDDDDDD 325
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 301 DDDDDDDDDDDDDDDDDDDDDDD 323
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 292 DDDDDDDDDDDDDDDDDDDDDDD 314
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 293 DDDDDDDDDDDDDDDDDDDDDDD 315
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 300 DDDDDDDDDDDDDDDDDDDDDDD 322
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 295 DDDDDDDDDDDDDDDDDDDDDDD 317
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 302 DDDDDDDDDDDDDDDDDDDDDDD 324
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 291 DDDDDDDDDDDDDDDDDDDDDDD 313
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 296 DDDDDDDDDDDDDDDDDDDDDDD 318
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 299 DDDDDDDDDDDDDDDDDDDDDDD 321
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 298 DDDDDDDDDDDDDDDDDDDDDDD 320
Score = 28.9 bits (63), Expect = 1.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D DD+
Sbjct: 294 DDDDDDDDDDDDDDDDDDDDDDD 316
Score = 26.2 bits (56), Expect = 8.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDE 113
+DD++ DD++DDDD D D +
Sbjct: 305 DDDDDDDDDDDDDDDDDDDDDGD 327
Score = 26.2 bits (56), Expect = 8.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 91 EDDEEQVVDDEEDDDDRCDLDDELV 115
+DD++ DD++DDDD D D +V
Sbjct: 307 DDDDDDDDDDDDDDDDDDDGDYYIV 331
>At1g47970 Unknown protein (T2J15.12)
Length = 198
Score = 33.1 bits (74), Expect = 0.072
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 34 DAEEEQEQEPDQNQQDAAPVEEIKIIHQIRPVLPDPDAVAVVEIDRQQYHYLHGYAYEDD 93
D ++E+E+E D + D Q+ L P + + D + G +DD
Sbjct: 51 DDDDEEEEEDDDDDDDV----------QVLQSLGGPPVQSAEDEDEEGDE--DGNGDDDD 98
Query: 94 EEQVVDDEEDDDDRCDLDDE 113
++ DD++DDD+ D++DE
Sbjct: 99 DDGDDDDDDDDDEDEDVEDE 118
>At1g17680 unknown protein
Length = 896
Score = 33.1 bits (74), Expect = 0.072
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 93 DEEQVVDDEE---DDDDRCDLDDELVPWEVG---NKLGRQRMKKLGKRACSKMKNSKRSP 146
DEE +VDD++ DDDD D +E +E G N R + L +R + +S+R+P
Sbjct: 48 DEEGLVDDDDDDSDDDDEGDESEEEDDFEAGSVPNTFERPEYEALAERKRKALADSQRNP 107
>At4g27310 putative protein
Length = 223
Score = 32.7 bits (73), Expect = 0.093
Identities = 18/38 (47%), Positives = 24/38 (62%), Gaps = 9/38 (23%)
Query: 89 AYEDDEEQVVD----DEEDDDDRCDLDDE-----LVPW 117
+Y+DDEE+ D D+ED+DD D DDE +VPW
Sbjct: 119 SYDDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPW 156
Score = 26.9 bits (58), Expect = 5.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 92 DDEEQVVDDEEDDDDRCDLDDE 113
DD E DDEE+D+D DDE
Sbjct: 115 DDAESYDDDEEEDEDEEYSDDE 136
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,336,046
Number of Sequences: 26719
Number of extensions: 210590
Number of successful extensions: 3003
Number of sequences better than 10.0: 189
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1631
Number of HSP's gapped (non-prelim): 642
length of query: 167
length of database: 11,318,596
effective HSP length: 92
effective length of query: 75
effective length of database: 8,860,448
effective search space: 664533600
effective search space used: 664533600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Lotus: description of TM0258a.2