BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0253.6
         (499 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g64880 unknown protein                                             612  e-175
At2g33800 30S ribosomal protein S5                                     89  4e-18
At3g28770 hypothetical protein                                         46  4e-05
At3g57490 40S ribosomal protein S2 homolog                             44  2e-04
At2g41840 40S ribosomal protein S2                                     44  3e-04
At1g59359 ribosomal protein S2, putative                               44  3e-04
At1g58983 ribosomal protein S2, putative                               44  3e-04
At1g58380 unknown protein                                              44  3e-04
At1g76780 putative heat shock protein                                  42  8e-04
At1g52410 myosin-like protein                                          41  0.002
At3g47890 putative protein                                             40  0.004
At2g45820 remorin                                                      40  0.004
At3g15950 unknown protein                                              39  0.005
At1g67230 unknown protein                                              38  0.011
At5g55920 nucleolar protein-like                                       37  0.019
At5g52550 unknown protein                                              37  0.019
At1g80270 unknown protein (At1g80270)                                  37  0.019
At5g47820 kinesin-like protein                                         37  0.025
At3g26580 unknown protein                                              37  0.033
At1g32830 putaive protein on FARE2.4 (cds2)                            36  0.056

>At1g64880 unknown protein
          Length = 515

 Score =  612 bits (1579), Expect = e-175
 Identities = 301/459 (65%), Positives = 378/459 (81%), Gaps = 12/459 (2%)

Query: 45  YSGKSLYSTSSDARIVQDLLAQVEKDRLREKNERMRAGLDTADIDAEGEEDYMGVGPLIE 104
           +   S  S S   R+V++L+A+VEK++ RE+ ER R GLD  DIDAE EEDY+G+ P IE
Sbjct: 65  FFSSSTMSPSEADRVVRELIAEVEKEKQREREERQRQGLDYKDIDAEDEEDYLGIEPFIE 124

Query: 105 KLEKEKLKECPELMRYEEPTDSDSDEDEYEASQ--KKFDDFERKFKRHQDLLKNFTDADT 162
           KL+K+ LK+  EL R EE +DSDS+ DE +  +  KK D F +KF+RH++LL+  T ++T
Sbjct: 125 KLKKQNLKDDGELNRREESSDSDSEYDEIDLDEERKKEDIFNKKFQRHKELLQTLTKSET 184

Query: 163 LDDAFKWMNRIDKFEDKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALRLVQW 222
           LD+AF+WMN++DKFE+KHF+LRPEYRVIGELMNRLKV  + K+KF+LQ KLNRA+RLV+W
Sbjct: 185 LDEAFRWMNKLDKFEEKHFKLRPEYRVIGELMNRLKVA-EGKEKFVLQQKLNRAMRLVEW 243

Query: 223 KEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQG--QGDAADDDDEQEFDDMK 280
           KEAFDP+NP NYGVI+        D +Q  G E+E++ +    + D  DDDDE+EFDDMK
Sbjct: 244 KEAFDPNNPANYGVIER-------DNVQGGGEEREERLVADGPKDDNDDDDDEEEFDDMK 296

Query: 281 EKDNIILAKLDAIDKKLEEKLAELEYTFGKKGKVLEEEIRDLAEERNELTEKKRRPLYRK 340
           E+D+I+L KL+AIDKKLE KL+EL++TFGKKGK LEEEIR+LAE+RN LTEKKR+PLYRK
Sbjct: 297 ERDDILLEKLNAIDKKLEIKLSELDHTFGKKGKRLEEEIRELAEDRNALTEKKRQPLYRK 356

Query: 341 GFDVKLINVNRTCKVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQ 400
           G+DV +I+V + CKVTKGG+V +YTA++ CGNY G++G+AKAK      A+QKAYEKCFQ
Sbjct: 357 GYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQKAYEKCFQ 416

Query: 401 NLHFVERHEEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVV 460
           NLH+VERHEEHTIAHAIQTS+KKTK+YLWPAPT TGMKAGR+V+TIL LAGFKN+KSKV+
Sbjct: 417 NLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAGFKNIKSKVI 476

Query: 461 GSRNPHNTVKAVFKALNAIETPRDVQEKFGRTVVEKYLL 499
           GSRN +NTVKAV KALNA+ETP+DVQEKFGRTVVEKYLL
Sbjct: 477 GSRNSYNTVKAVLKALNAVETPKDVQEKFGRTVVEKYLL 515


>At2g33800 30S ribosomal protein S5
          Length = 303

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 52/159 (32%), Positives = 82/159 (50%)

Query: 332 KKRRPLYRKGFDVKLINVNRTCKVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVAL 391
           K ++   R GF+ +++ V R  KV KGG+ +K+ A++  G+  G VG   AK   V  A+
Sbjct: 137 KPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAV 196

Query: 392 QKAYEKCFQNLHFVERHEEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAG 451
           QK+     +N+  V   +  T  H  +  +   KV L PA   TG+ AG  V+ +L +AG
Sbjct: 197 QKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 256

Query: 452 FKNVKSKVVGSRNPHNTVKAVFKALNAIETPRDVQEKFG 490
            +N   K +GS N  N  +A   A+  +   RDV ++ G
Sbjct: 257 VENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERG 295


>At3g28770 hypothetical protein
          Length = 2081

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 65/307 (21%), Positives = 119/307 (38%), Gaps = 42/307 (13%)

Query: 61   QDLLAQVEKDRLREKNERMRAGLDTADIDAEGEEDYMGVGPLIEKLEKEKLKECPELMRY 120
            +DL A+ +++  +EK E         + D +  ED   +    +K EK+K +E     + 
Sbjct: 1056 RDLKAKKKEEETKEKKESENHKSKKKE-DKKEHEDNKSMKKEEDKKEKKKHEESKSRKKE 1114

Query: 121  EEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTD------------ADTLDDAFK 168
            E+  D +  ED+  +++KK D  E+K  +H  L+K  +D               ++ +  
Sbjct: 1115 EDKKDMEKLEDQ-NSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKS 1173

Query: 169  WMNRIDKFE-----DKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALRLVQWK 223
              N +DK E     D+  +   E +   E   +      +K   + +NK  +  +  + K
Sbjct: 1174 QKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNK 1233

Query: 224  EAFDPDNPDNYGVIQHEQLGPTSDALQN---------AGFEKEKQTIQGQGDAADDDDEQ 274
               D  N       + E +   S   +N         A  ++ K  I  Q D+  D    
Sbjct: 1234 PKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSD 1293

Query: 275  EFDDMKEKDNIILAKLDA---------IDKKLEEKLAELEYTFGKKGKVLEEEIRDLAEE 325
               D  E  N IL + D+          D+K +  +AE      KK K  +EE     ++
Sbjct: 1294 SQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAE-----NKKQKETKEEKNKPKDD 1348

Query: 326  RNELTEK 332
            +   T++
Sbjct: 1349 KKNTTKQ 1355



 Score = 35.8 bits (81), Expect = 0.056
 Identities = 70/321 (21%), Positives = 133/321 (40%), Gaps = 25/321 (7%)

Query: 24   NVVRNSVRSQLGCEGTALSSSYSGKSLYSTSSDARIVQDLLAQVEKDRLREKNERMRAGL 83
            N VRN   +    +G    S    K     S DA+ V+    +           + R+G 
Sbjct: 766  NRVRNKEEN---VQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGE 822

Query: 84   DTADIDAEGEEDYMGVGPLIEKLEKEKLKECPELMRYEEPTDSDSDEDEYEASQKKFDDF 143
            D  + D E  +DY  V    E  EK +       +  +E +    D+   E    K +  
Sbjct: 823  DNKE-DKEESKDYQSV----EAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESM 877

Query: 144  ERKFKRHQDLLKNFTDADTLDDAFKWMNRIDKFEDKHFRLRPEYRVIG---ELMNRLKVV 200
            ++K +  Q   K+ T  +  D A      + K   +  + + + +  G   E  + +   
Sbjct: 878  KKKREEVQRNDKSSTK-EVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTS 936

Query: 201  TDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKE--- 257
            + QK K   + K       ++ KE    +  +N    Q +    T+ + +N+  ++E   
Sbjct: 937  SKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKS-ENSKLKEENKD 995

Query: 258  -KQTIQGQGDAADDDDEQEFDDMKEK--DNIILAKLDAIDKKLEEKLAELEYTFGKKGKV 314
             K+  + +  A+ + +++E+++ K K  +     K  + DKK EEK +E      +K K 
Sbjct: 996  NKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSE-----ERKSKK 1050

Query: 315  LEEEIRDL-AEERNELTEKKR 334
             +EE RDL A+++ E T++K+
Sbjct: 1051 EKEESRDLKAKKKEEETKEKK 1071



 Score = 32.0 bits (71), Expect = 0.81
 Identities = 53/285 (18%), Positives = 103/285 (35%), Gaps = 36/285 (12%)

Query: 32   SQLGCEGTALSSSYSGKSLYSTSSDARIVQDLLAQVEKDRLREKNERMRAGLDTADIDAE 91
            +Q   + T  + S   K+     +D++      +Q + D    KNE +      A     
Sbjct: 1261 NQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDE--SKNEILMQADSQATTQRN 1318

Query: 92   GEEDYMGVGPLIEKLEKEKLKECPELMRYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQ 151
             EED      + E  ++++ KE        +P D   +  +    +K+  + E K   +Q
Sbjct: 1319 NEEDRKKQTSVAENKKQKETKE-----EKNKPKDDKKNTTKQSGGKKESMESESKEAENQ 1373

Query: 152  DLLKNFTDADTLDDAFKWMNRIDKFEDKHFRLRPEYRVIGELMNRLKVVTD--------- 202
               +  T AD+ +   + + + D   D H   + +     E  N + +  D         
Sbjct: 1374 QKSQATTQADSDESKNEILMQADSQADSHSDSQAD---SDESKNEILMQADSQATTQRNN 1430

Query: 203  ----QKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEK 258
                +K   + +NK  +  +  + K   D  N       + E +   S   +N   +K +
Sbjct: 1431 EEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQ--QKSQ 1488

Query: 259  QTIQGQGDAADDDDEQEFD-----------DMKEKDNIILAKLDA 292
             T QG+ D + ++   + D           D  E  N IL + D+
Sbjct: 1489 ATTQGESDESKNEILMQADSQADTHANSQGDSDESKNEILMQADS 1533


>At3g57490 40S ribosomal protein S2 homolog
          Length = 276

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 35/131 (26%), Positives = 57/131 (42%), Gaps = 8/131 (6%)

Query: 354 KVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERH----- 408
           K T+ GQ  ++ A +  G+ NG VG        V  A++ A      ++  + R      
Sbjct: 99  KQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNK 158

Query: 409 --EEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGS-RNP 465
             + HT+   +        V + PAP  +G+ A R+ + +L  AG  +V +   GS +  
Sbjct: 159 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 218

Query: 466 HNTVKAVFKAL 476
            N VKA F  L
Sbjct: 219 GNFVKATFDCL 229


>At2g41840 40S ribosomal protein S2
          Length = 285

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 354 KVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERH----- 408
           K T+ GQ  ++ A +  G+ NG VG        V  A++ A      ++  V R      
Sbjct: 108 KQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 167

Query: 409 --EEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGS-RNP 465
             + HT+   +        V + PAP  +G+ A R+ + +L  AG  +V +   GS +  
Sbjct: 168 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 227

Query: 466 HNTVKAVFKAL 476
            N VKA F  L
Sbjct: 228 GNFVKATFDCL 238


>At1g59359 ribosomal protein S2, putative
          Length = 284

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 354 KVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERH----- 408
           K T+ GQ  ++ A +  G+ NG VG        V  A++ A      ++  V R      
Sbjct: 107 KQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 166

Query: 409 --EEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGS-RNP 465
             + HT+   +        V + PAP  +G+ A R+ + +L  AG  +V +   GS +  
Sbjct: 167 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 226

Query: 466 HNTVKAVFKAL 476
            N VKA F  L
Sbjct: 227 GNFVKATFDCL 237


>At1g58983 ribosomal protein S2, putative
          Length = 284

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 354 KVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERH----- 408
           K T+ GQ  ++ A +  G+ NG VG        V  A++ A      ++  V R      
Sbjct: 107 KQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 166

Query: 409 --EEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGS-RNP 465
             + HT+   +        V + PAP  +G+ A R+ + +L  AG  +V +   GS +  
Sbjct: 167 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 226

Query: 466 HNTVKAVFKAL 476
            N VKA F  L
Sbjct: 227 GNFVKATFDCL 237


>At1g58380 unknown protein
          Length = 284

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 8/131 (6%)

Query: 354 KVTKGGQVVKYTAMLACGNYNGVVGFAKAKGPAVPVALQKAYEKCFQNLHFVERH----- 408
           K T+ GQ  ++ A +  G+ NG VG        V  A++ A      ++  V R      
Sbjct: 107 KQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 166

Query: 409 --EEHTIAHAIQTSFKKTKVYLWPAPTATGMKAGRIVQTILHLAGFKNVKSKVVGS-RNP 465
             + HT+   +        V + PAP  +G+ A R+ + +L  AG  +V +   GS +  
Sbjct: 167 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 226

Query: 466 HNTVKAVFKAL 476
            N VKA F  L
Sbjct: 227 GNFVKATFDCL 237


>At1g76780 putative heat shock protein
          Length = 1871

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 72/314 (22%), Positives = 126/314 (39%), Gaps = 34/314 (10%)

Query: 52  STSSDARIVQDLLAQVEKDRLREKNERMRAGLDTADIDAEG-EEDYMGVGPLIEKLEKEK 110
           ++ ++  I  D+L  V+K R   K++  +   +  +   EG  E  M  G  I +    K
Sbjct: 481 ASEAEKNIKNDILKPVQK-RSEGKHKIQKTFQEETNKQPEGYNEKIMETGKKINEDGTRK 539

Query: 111 LKECPELMRYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTDADTLDDAFKWM 170
           ++E       +EP  S+ +    E  + K +D E+K K      +   ++D        +
Sbjct: 540 VQEMIRQQELDEPARSEKENRSRELVKSKTNDEEKKEKEIAGTERKEKESDR-----PKI 594

Query: 171 NRIDKFEDKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALRLVQWKEAFDPDN 230
            R  +  D+    + ++ + GE+    ++   +K+ F   + + R +R        D + 
Sbjct: 595 LREQEVADEVAEDKTKFSIYGEVKEEEEIAGKEKE-FGSDDDIARIVR--------DTEQ 645

Query: 231 PDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKDNIILAKL 290
            D+  +   E+     D +Q    E EK    G+G  A  + + E +  K        KL
Sbjct: 646 LDSNAMKGQEE----KDMIQELVLE-EKVCDGGKGIIAVAETKAENNKSKRVQETEEQKL 700

Query: 291 DAIDK--KLEEKLAELEYT---------FGKKGKVLEEEIRDLAEERNELTEKKR--RPL 337
           D  D   K  +KL E E +          GKK    E+ I+D A E  E+ EK       
Sbjct: 701 DKEDTCGKHFQKLIEGEISDHGEVEDVEKGKKRTEAEKRIKDRAREAEEIKEKDLGVSGR 760

Query: 338 YRKGFDVKLINVNR 351
           Y KG  +K +  NR
Sbjct: 761 YIKGTTIKELVENR 774



 Score = 35.4 bits (80), Expect = 0.074
 Identities = 65/308 (21%), Positives = 124/308 (40%), Gaps = 47/308 (15%)

Query: 70  DRLREKNERMRAGLDTADIDAEGEEDYMGVGPLIEKLEKEKLKECPELMRYEEPTDSDSD 129
           ++  + +ER+      AD + E  +  +   P IE       +EC E  R+EE    +++
Sbjct: 96  EKSHQIDERIEEEKGLADSNKESVDSSLRKPPDIEG------RECHEQTRHEE---QENN 146

Query: 130 EDEYEASQKKFDDF-ERKFKRHQDLLKNFTD------------ADTLDDAFKWMNRIDKF 176
           +   +A     DDF  R F+  ++   +  D             D + D  + +  I++ 
Sbjct: 147 KQLVQAESDDSDDFGSRAFEEIEEQESDVLDRTSTSGAMEKEMTDDVGDGLRKVQGIEEP 206

Query: 177 EDKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALRLV---QWKEAFDPDNPDN 233
           E  +   +    V GE          +K K +  +K NR ++        E F P N D 
Sbjct: 207 ERHNEESKISEMVDGETSGH------EKKKVVKMDKKNRDVKEEVDGAMGEGFRP-NIDR 259

Query: 234 YGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKDNIILAKLDAI 293
             V+  +++  T     +  FE +K     + D  ++    +     E  N+I       
Sbjct: 260 TQVVGDDEIAETEK--NDEEFESDKLEAD-EVDKINEGGNTKVRRHSEDRNLI------- 309

Query: 294 DKKLEEKLAELEYTFGKKGKVLEEEIRDLAEERNELTEKK-RRPLYRKGFDVKLINVNRT 352
             KL+EK  E +++  +KG   EE +++L EE+    E   R  +   G ++++  V+  
Sbjct: 310 --KLQEK--EEQHSKEQKGHSKEENMKELVEEKTPEAETTIRNDILGPGQEIEVPEVDTL 365

Query: 353 CKVTKGGQ 360
            K +  G+
Sbjct: 366 GKTSDEGK 373



 Score = 32.0 bits (71), Expect = 0.81
 Identities = 30/128 (23%), Positives = 60/128 (46%), Gaps = 18/128 (14%)

Query: 52   STSSDARIVQDLLAQ--VEKDRLREKNERMRAGLDTADIDAEGE----EDYMGVGPLIEK 105
            +T +++R +  +  Q   E++RL+E+        D      E E    E   G   +I++
Sbjct: 1721 ATDNESRKIHQIKEQGTSEQERLKEQGRIKELVEDRTHFCREKENRETEYEDGSSKMIQE 1780

Query: 106  LEKEKLKECPELMRYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTDADTLDD 165
            ++KE+  E         P D ++ ED+ E  + +F+D E  ++     +   TD+D+ +D
Sbjct: 1781 IDKEESIE---------PVDRETSEDDEEELEIEFEDEEEDWEAE---VIQETDSDSDND 1828

Query: 166  AFKWMNRI 173
              + + RI
Sbjct: 1829 KIRQIKRI 1836



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 30/119 (25%), Positives = 50/119 (41%), Gaps = 22/119 (18%)

Query: 223 KEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEK 282
           KE  +   P+    I+++ LGP        G E E   +   G  +D+         KEK
Sbjct: 332 KELVEEKTPEAETTIRNDILGP--------GQEIEVPEVDTLGKTSDEG--------KEK 375

Query: 283 DNIILAKL------DAIDKKLEEKLAELEYTFGKKGKVLEEEIRDLAEERNELTEKKRR 335
            NI+  ++      + ID K+ E  A      G   +  E +  + A+E +++ EKK R
Sbjct: 376 QNIVKKEIKNGDATEEIDAKMGEVFASNIADTGMNSEDFESDKLESADEVDKMVEKKDR 434



 Score = 28.5 bits (62), Expect = 9.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 25/124 (20%)

Query: 201  TDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQT 260
            +DQ +K+  QNK+   +         D D  + Y +         S+ ++N   E  K+ 
Sbjct: 1520 SDQAEKYAKQNKIQEVMN--------DEDKKEEYHI---------SERVRN---EMAKRI 1559

Query: 261  IQGQGDAADDDDEQEFDDMKEKDNIILAKLDAIDKKLEEKLAELEYTFGKKGKVLEEEIR 320
            +Q +  A D   ++   + +E   +   K     ++  ++L ELE +  KKG V E+E+ 
Sbjct: 1560 LQVESKANDGSSKKNETEGQESTGLRGRK----KRENHQELVELETSDQKKG-VKEDEVV 1614

Query: 321  DLAE 324
              AE
Sbjct: 1615 GKAE 1618


>At1g52410 myosin-like protein
          Length = 755

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 19/268 (7%)

Query: 61  QDLLAQVEKDRLREKNERMRAGLDTADIDAEGEEDYMGVGPLIEKLEKE--KLKECPELM 118
           Q LL ++E++      E  +  ++    D + EE       ++E +E+E     E  E +
Sbjct: 181 QSLLEEIEREFEAATKELEQLKVNDFTGDKDDEEHSAKRKSMLEAIEREFEAAMEGIEAL 240

Query: 119 RYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTDADTLDD--AFKWMNRIDKF 176
           +  + T S  DE++        ++ ER+F+  + L  + + AD  ++  A K  + +++ 
Sbjct: 241 KVSDSTGSGDDEEQSAKRLSMLEEIEREFEGLEQLRASDSTADNNEEEHAAKGQSLLEEI 300

Query: 177 EDKHFRLRPEYRVIGELMNRLKV--VTDQKDKFILQNKLNRALRLVQWKEAFDPD----N 230
           E        E+    E + +L+V   T+ K+ F    + +    + +  EA   D    N
Sbjct: 301 E-------REFEAATESLKQLQVDDSTEDKEHFTAAKRQSLLEEIEREFEAATKDLKQLN 353

Query: 231 PDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKDNIILAKL 290
               G    EQ    +  L++   E E  TI  +   A+D  E   ++ +E+     + L
Sbjct: 354 DFTEGSADDEQSAKRNKMLEDIEREFEAATIGLEQLKANDFSEG--NNNEEQSAKRKSML 411

Query: 291 DAIDKKLEEKLAELEYTFGKKGKVLEEE 318
           + I+++ E  +  L+       + LEEE
Sbjct: 412 EEIEREFEAAIGGLKQIKVDDSRNLEEE 439


>At3g47890 putative protein
          Length = 1528

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 46/201 (22%), Positives = 81/201 (39%), Gaps = 20/201 (9%)

Query: 109 EKLKECPELMRYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTDADTLDDAFK 168
           E ++EC   +  E P D  + E   + +Q K    E +    QD L++      +     
Sbjct: 118 EVVQECHRALSIENPIDP-AKESLQDETQLKILTPEARIVHVQDELRSLIQKSNISSLST 176

Query: 169 WMNRIDKFEDKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNR-----------AL 217
           WMN + K E+K FRL P  R+  + +    V T + ++    NK              A 
Sbjct: 177 WMNNLGKGEEK-FRLIPIRRMAEDPIESNLVQTRRPNEIKKANKSIEEIRKEVEVRVAAA 235

Query: 218 RLVQWKEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDD--EQE 275
           RL+Q K        +N G + ++    T  + + +G  ++    +  G  AD  D  +  
Sbjct: 236 RLLQQK-----SECENVGAVDNKGSDATLGSGKRSGERRKHGNARRNGSTADRRDRVKSY 290

Query: 276 FDDMKEKDNIILAKLDAIDKK 296
           +D M ++    L ++   D K
Sbjct: 291 WDSMSKEMKKQLLRVKLSDLK 311


>At2g45820 remorin
          Length = 190

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 252 AGFEKEKQTI------QGQGDAADDDDEQEFDDMKEKDNIILAKLDAIDKKLEEKLAELE 305
           A  EKEK+T       + +   A++  +++  D+   +N   A ++A  +K+EEKL + +
Sbjct: 74  ADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKK 133

Query: 306 YTFGKKGKVLEEEIRDLAEERNELTEKKR 334
             +G+K K     I  LAEE+  + E K+
Sbjct: 134 AQYGEKMKNKVAAIHKLAEEKRAMVEAKK 162


>At3g15950 unknown protein
          Length = 622

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 59/286 (20%), Positives = 106/286 (36%), Gaps = 26/286 (9%)

Query: 61  QDLLAQVEKDRLREKNERMRAGLDTADID----AEGEEDYMGVGPLIEKLEKEKLKECPE 116
           Q +L ++E+D      E    GL+    D       EE       ++E++E+E  +    
Sbjct: 37  QSMLDEIERDF-----EAATKGLEQLKADDLTGINDEEHAAKRQKMLEEIEREFEEATKG 91

Query: 117 LMRYEEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNF-TDADTLDDAFKWMNRIDK 175
           L      T S  DE +    Q   D+ ER+F+     LK    +A T+ D      +  K
Sbjct: 92  LEELRHSTSSTDDEAQSAKRQNMLDEIEREFEAATSGLKELKINAHTVKDDVDDKEQDAK 151

Query: 176 FEDKHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALRLVQWKEAFDPDNPDNYG 235
            +     +  E+  + E   +L+ + D K +        R   L + +  F+    ++  
Sbjct: 152 RQSMLDAIEREFEAVTESFKQLEDIADNKAEGD-DESAKRQSMLDEIEREFEAAT-NSLK 209

Query: 236 VIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAA--------------DDDDEQEFDDMKE 281
            +  +      D+ ++A      + I+ + +AA              D DD++     K 
Sbjct: 210 QLNLDDFSEGDDSAESARRNSMLEAIEREFEAATKGLEELKANDSTGDKDDDEHVARRKI 269

Query: 282 KDNIILAKLDAIDKKLEEKLAELEYTFGKKGKVLEEEIRDLAEERN 327
               I  + +A  K LEE   E E    K+  +LE   R+     N
Sbjct: 270 MLEAIEREFEAATKGLEELKNESEQAENKRNSMLEAFEREFEAATN 315


>At1g67230 unknown protein
          Length = 1132

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 54/262 (20%)

Query: 91  EGEEDYMGVGPLIEKLEKEKLKECPELMRY-EEPTDSDSDEDEYEASQKKFDDFERKFKR 149
           E +E  + +  L+EK+  E   +  E+ +  +E   ++ +  EY   Q +  +   K + 
Sbjct: 443 EDKEIILNLKALVEKVSGENQAQLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRS 502

Query: 150 HQDLLKNFTDADTLDDAFKWMNRIDKFEDKHFRLRPEYRVIGELMNRLKVVTDQKDKFIL 209
            Q+LL+         +A     + + FE +   L      IG   N LK +TDQK+    
Sbjct: 503 QQELLQK--------EAEDLKAQRESFEKEWEELDERKAKIG---NELKNITDQKE---- 547

Query: 210 QNKLNRALRLVQWKEAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAAD 269
             KL R + L                  + E+L     A  N   E+E +T++       
Sbjct: 548 --KLERHIHL------------------EEERLKKEKQA-ANENMERELETLEVA----- 581

Query: 270 DDDEQEFDDMKEKDNIILAKLDAIDKKLEEKLAELEYTFGKKGKVLEEEIRDLAEER-NE 328
              +  F +  E +  +L+      KK E + ++L +    + + LE +++ + EE+  E
Sbjct: 582 ---KASFAETMEYERSMLS------KKAESERSQLLHDIEMRKRKLESDMQTILEEKERE 632

Query: 329 LTEKKRRPLYRKGFDVKLINVN 350
           L  KK+  L+ +  + +L N+N
Sbjct: 633 LQAKKK--LFEEEREKELSNIN 652


>At5g55920 nucleolar protein-like
          Length = 682

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 39/120 (32%), Positives = 54/120 (44%), Gaps = 26/120 (21%)

Query: 224 EAFDPDNPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKD 283
           + F  D  +N      E LG   D L+ +G E E+ ++    DA  DDD+          
Sbjct: 108 QLFSDDEEEN----DEETLG--DDFLEGSGDEDEEGSLDADSDADSDDDD---------- 151

Query: 284 NIILAKLDAIDKKL----EEKLAELEYTFGKKGKVLEEEIRDLA---EERNELTEKKRRP 336
             I+AK DAID+ L    ++  AELE  F K+  V +EE    A       EL E+ R P
Sbjct: 152 --IVAKSDAIDRDLAMQKKDAAAELE-DFIKQDDVHDEEPEHDAFRLPTEEELEEEARGP 208



 Score = 32.7 bits (73), Expect = 0.48
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)

Query: 230 NPDNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKDNI-ILA 288
           N D + V + +++     + +  G +   +T++    ++DDDDE E  +  EK ++ +  
Sbjct: 552 NMDGFFVAKLKKMSNVKQSSEE-GDDDAVETVEQAEVSSDDDDEAEAIEETEKPSVPVRQ 610

Query: 289 KLDAIDKKLEEKLAE-LEYTFGKKGKVLEEEIRDLAEERNELTEKKRR 335
             +  +KK +EKLA+  E   GKK K  + E  ++ E      +KK+R
Sbjct: 611 PKERKEKKNKEKLAKSKEDKRGKKDKKSKSE--NVEEPSKPRKQKKKR 656


>At5g52550 unknown protein
          Length = 360

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 17/104 (16%)

Query: 245 TSDALQNAGFEKEKQTI-QGQGDAADDDD-------EQEFDDM---KEKDNIILAKLDAI 293
           TS A++ A  EK+KQ   +GQ +AAD++D       +QE D++   K+ +N    K + +
Sbjct: 46  TSAAIR-AELEKKKQMKKEGQLEAADEEDSADAAKKKQERDELERIKQAEN----KKNRL 100

Query: 294 DKKLEEKLAELEYTFGKKGKVLEEEIRDLAEERNELTEKKRRPL 337
           +K +    A +     KK + LEE+ R LAEE   + EKK+R L
Sbjct: 101 EKSIATSAAIMAELEKKKLRKLEEQKR-LAEEGAAIAEKKKRRL 143


>At1g80270 unknown protein (At1g80270)
          Length = 596

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 29/117 (24%), Positives = 57/117 (47%), Gaps = 12/117 (10%)

Query: 253 GFEKEKQTIQGQGDAADDDDEQEFD-DMKEKDNIILAKLDAIDKKLEEKLAELEYTF-GK 310
           GF + + +  GQG  + D+DE +   D +E++ + L + D   K +E+K +EL  T    
Sbjct: 80  GFSELEGSKSGQGSTSSDEDEGKLSADEEEEEELDLIETDVSRKTVEKKQSELFKTIVSA 139

Query: 311 KGKVLEEEIRDLAEERNELT---------EKKRRPLYRKGFDV-KLINVNRTCKVTK 357
            G  +   +    EE NE+T         + +RR +Y +   + + +  N+  ++T+
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTE 196


>At5g47820 kinesin-like protein
          Length = 1035

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 29/109 (26%), Positives = 56/109 (50%), Gaps = 14/109 (12%)

Query: 232 DNYGVIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDDEQEFDDMKEKDNIILAKLD 291
           D  G ++ + L  +  +++++ +   + T    GD+ + D+E +  + K   N +  +L 
Sbjct: 456 DIVGSVRPDGLKRSLHSIESSNYPMVEATT---GDSREIDEEAKEWEHKLLQNSMDKELY 512

Query: 292 AIDKKLEEKLAE-----------LEYTFGKKGKVLEEEIRDLAEERNEL 329
            ++++LEEK +E           L+  FGKK   +E+E R + EERN L
Sbjct: 513 ELNRRLEEKESEMKLFDGYDPAALKQHFGKKIAEVEDEKRSVQEERNRL 561


>At3g26580 unknown protein
          Length = 350

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 9/80 (11%)

Query: 257 EKQTIQGQGDAADDDDEQEFDDMKEKDNIILAKLDAIDKKLEEKLAELEYTFGKKGKVLE 316
           ++++  G G   D+++E+E+ D+ EK+    AK     K+LE K  EL+Y   ++G   E
Sbjct: 91  DEESSDGGGGGGDEEEEEEYFDV-EKERKRRAKEFHDTKELERKAEELQYKIDEEGDDSE 149

Query: 317 E--------EIRDLAEERNE 328
           E        E++ +A+E+ E
Sbjct: 150 EKKRMRVKRELQKVAQEQAE 169


>At1g32830 putaive protein on FARE2.4 (cds2)
          Length = 707

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 41/217 (18%), Positives = 94/217 (42%), Gaps = 11/217 (5%)

Query: 60  VQDLLAQVEKDRLREKNERMRAGLDTADIDAEGEEDYMGVGPLIEKLEKEKLKECPELMR 119
           ++ ++ Q  K +     ++   G     I  +G+E+  G     EKLE+E  +E  E + 
Sbjct: 367 IETVVHQSRKRKSMSFGKKATKGQKNKRIPKQGDEEMEGEE---EKLEEEGKEEEEEKVE 423

Query: 120 Y-EEPTDSDSDEDEYEASQKKFDDFERKFKRHQDLLKNFTDADTLDDAFKWMNRIDKFED 178
           Y +  +  + +E E + + K+ D+   + +R +   +   + D  +D  K  N  +  E 
Sbjct: 424 YRDHHSTCNVEETEKQENPKQCDE---EMEREEGKEEKVEEHDEYNDVLKEENVKEHDEH 480

Query: 179 KHFRLRPEYRVIGELMNRLKVVTDQKDKFILQNKLNRALR---LVQWKEAFDPDNPDNYG 235
                + EY ++ +  N     T +K+   L+ K     +   + +  E  + ++ + Y 
Sbjct: 481 DEIEDQEEYAILSDDENNGTAPT-EKESHPLKEKTTEVPKEETVEEHDEHDETEDQEAYV 539

Query: 236 VIQHEQLGPTSDALQNAGFEKEKQTIQGQGDAADDDD 272
           ++  ++   T+   + +  +KE+ T   +    DD+D
Sbjct: 540 ILSDDEDNGTAPTEKESQPQKEETTEVPRETKKDDED 576


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.315    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,426,342
Number of Sequences: 26719
Number of extensions: 534879
Number of successful extensions: 3701
Number of sequences better than 10.0: 193
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 3247
Number of HSP's gapped (non-prelim): 409
length of query: 499
length of database: 11,318,596
effective HSP length: 103
effective length of query: 396
effective length of database: 8,566,539
effective search space: 3392349444
effective search space used: 3392349444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)