BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0243.12
(1626 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 763 0.0
At1g48710 hypothetical protein 759 0.0
At1g58140 hypothetical protein 757 0.0
At3g60170 putative protein 750 0.0
At2g15650 putative retroelement pol polyprotein 719 0.0
At1g32590 hypothetical protein, 5' partial 663 0.0
At3g59720 copia-type reverse transcriptase-like protein 655 0.0
At3g25450 hypothetical protein 635 0.0
At2g20460 putative retroelement pol polyprotein 628 e-180
At2g16000 putative retroelement pol polyprotein 622 e-178
At1g70010 hypothetical protein 586 e-167
At1g31210 putative reverse transcriptase 585 e-167
At2g05390 putative retroelement pol polyprotein 581 e-165
At1g37110 551 e-156
At2g21460 putative retroelement pol polyprotein 546 e-155
At2g13930 putative retroelement pol polyprotein 541 e-153
At4g17450 retrotransposon like protein 531 e-151
At1g26990 polyprotein, putative 528 e-149
At5g35820 copia-like retrotransposable element 527 e-149
At4g03810 putative retrotransposon protein 493 e-139
>At3g61330 copia-type polyprotein
Length = 1352
Score = 763 bits (1969), Expect = 0.0
Identities = 417/1049 (39%), Positives = 594/1049 (55%), Gaps = 32/1049 (3%)
Query: 582 KEDPESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPG 635
K + ++ Y+ ++ + L+A K + WYLDSG S HM G K MF EL
Sbjct: 301 KFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVR 360
Query: 636 GEVGFGGNEKGKIIGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFN 691
G V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 361 GNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLK 420
Query: 692 QKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMR 751
+ Q + KN ++ + + AQ +K + EE W+WH R GH +
Sbjct: 421 DNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFG 478
Query: 752 KISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGP 811
+ LS+ +VRGLP + + +CE C GK K+ F ++ +PLEL+H D+ GP
Sbjct: 479 GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 812 VKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDL 871
+K +S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 872 GGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWA 931
GGEF + +F + GI + PR+PQQNGVVERKNRT+ EMAR+ML+ + K WA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 932 ETVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKS 991
E V A Y+ NR + + KTP E W KP +S+ FG + + ++ K D KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 992 SKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGK 1051
K + +GY + SKG++ YN D K S ++ FD++ + D + N D
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNF 767
Query: 1052 APEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL- 1110
P E +E EP E PS T + T++ +E + + R RS E T
Sbjct: 768 FPH-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTEN 823
Query: 1111 ---LSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKW 1167
L+L L + EP +A++ K W AM+EE+ KND W L P IG KW
Sbjct: 824 QENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKW 883
Query: 1168 VFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1227
V++ K N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +H
Sbjct: 884 VYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 943
Query: 1228 QMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1287
QMDVKSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ +
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 1003
Query: 1288 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1347
E +F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G
Sbjct: 1004 EKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGL 1063
Query: 1348 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1407
+ Y+LGI+V Q G +I Q Y KE+LKKF + +S TPM L K+++ V
Sbjct: 1064 MSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDP 1123
Query: 1408 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1467
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y
Sbjct: 1124 TTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS 1183
Query: 1468 KTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1527
TS+YKL GY D+D+ GD +RKSTSG ++G +W SK+Q + LST EAEY++A
Sbjct: 1184 TTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAAT 1243
Query: 1528 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1586
C +W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V
Sbjct: 1244 SCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1303
Query: 1587 QKGVLLLKFVDTDHQWADIFTKSLAEDRF 1615
K + L++V T Q AD FTK L + F
Sbjct: 1304 SKKDVQLEYVKTHDQVADFFTKPLKRENF 1332
>At1g48710 hypothetical protein
Length = 1352
Score = 759 bits (1959), Expect = 0.0
Identities = 416/1049 (39%), Positives = 592/1049 (55%), Gaps = 32/1049 (3%)
Query: 582 KEDPESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPG 635
K + ++ Y+ ++ + L+A K + WYLDSG S HM G K MF EL
Sbjct: 301 KFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVR 360
Query: 636 GEVGFGGNEKGKIIGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFN 691
G V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 361 GNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLK 420
Query: 692 QKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMR 751
+ Q + KN ++ + + AQ +K + EE W+WH R GH +
Sbjct: 421 DNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFG 478
Query: 752 KISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGP 811
+ LS+ +VRGLP + + +CE C GK K+ F ++ + LEL+H D+ GP
Sbjct: 479 GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGP 537
Query: 812 VKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDL 871
+K +S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 872 GGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWA 931
GGEF + +F + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K WA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 932 ETVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKS 991
E V A Y+ NR + + KTP E W K +S+ FG + + ++ K D KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 992 SKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGK 1051
K + +GY + SKG++ YN D K S ++ FD++ + D + N D
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNF 767
Query: 1052 APEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL- 1110
P E +E EP E PS T + T++ +E + + R RS E T
Sbjct: 768 FPH-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTEN 823
Query: 1111 ---LSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKW 1167
L+L L + EP EA++ K W AM+EE+ KND W L P IG KW
Sbjct: 824 QENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKW 883
Query: 1168 VFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1227
V++ K N KG+V R KARLVA+GY Q+ GIDY E FAPVARLE +RL+IS + + +H
Sbjct: 884 VYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIH 943
Query: 1228 QMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1287
QMDVKSAFLNG + EEVY+ QP G+ + + D V +LKK+LYGLKQAPRAW R+ +
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 1003
Query: 1288 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1347
E +F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G
Sbjct: 1004 EKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGL 1063
Query: 1348 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1407
+ Y+LGI+V Q G +I Q Y KE+LKKF M +S TPM L K+++ V
Sbjct: 1064 MSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDP 1123
Query: 1408 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1467
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y
Sbjct: 1124 TTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS 1183
Query: 1468 KTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1527
TS+YKL GY D+D+ GD +RKSTSG ++G +W SK+Q + LST EAEY++A
Sbjct: 1184 TTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAAT 1243
Query: 1528 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1586
C +W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V
Sbjct: 1244 SCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1303
Query: 1587 QKGVLLLKFVDTDHQWADIFTKSLAEDRF 1615
K + L++V T Q ADIFTK L + F
Sbjct: 1304 SKKDVQLEYVKTHDQVADIFTKPLKREDF 1332
>At1g58140 hypothetical protein
Length = 1320
Score = 757 bits (1954), Expect = 0.0
Identities = 408/1045 (39%), Positives = 581/1045 (55%), Gaps = 56/1045 (5%)
Query: 582 KEDPESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPG 635
K + ++ Y+ ++ + L+A K + WYLDSG S HM G K MF EL
Sbjct: 301 KFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVR 360
Query: 636 GEVGFGGNEKGKIIGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFN 691
G V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 361 GNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLK 420
Query: 692 QKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMR 751
+ Q + KN ++ + + AQ +K + EE W+WH R GH +
Sbjct: 421 DNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFG 478
Query: 752 KISQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGP 811
+ LS+ +VRGLP + + +CE C GK K+ F ++ +PLEL+H D+ GP
Sbjct: 479 GLELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 812 VKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDL 871
+K +S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 872 GGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWA 931
GGEF + +F + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K WA
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 932 ETVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKS 991
E V A Y+ NR + + KTP E W KP +S+ FG + + ++ K D KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 992 SKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGK 1051
K + +GY + SKG++ YN D K S ++ FD++ + D + E + DK +
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPE 777
Query: 1052 APEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLL 1111
E P E+ P++SQ +K
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEEKC--------------------------------- 804
Query: 1112 SLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRN 1171
EP EA++ K W AM+EE+ KND W L P IG KWV++
Sbjct: 805 ---------EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKA 855
Query: 1172 KLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDV 1231
K N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQMDV
Sbjct: 856 KKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDV 915
Query: 1232 KSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 1291
KSAFLNG + EEVY+ QP G+ + + D V +LKK+LYGLKQAPRAW R+ + E +F
Sbjct: 916 KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDF 975
Query: 1292 VRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYF 1351
++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G + Y+
Sbjct: 976 IKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYY 1035
Query: 1352 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 1411
LGI+V Q G +I Q Y KE+LKKF M +S TPM L K+++ V ++
Sbjct: 1036 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFK 1095
Query: 1412 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSE 1471
++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y TS+
Sbjct: 1096 SLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSD 1155
Query: 1472 YKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICST 1531
YKL GY D+D+ GD +RKSTSG ++G +W SK+Q + LST EAEY++A C
Sbjct: 1156 YKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVC 1215
Query: 1532 QMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGV 1590
+W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K
Sbjct: 1216 HAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKD 1275
Query: 1591 LLLKFVDTDHQWADIFTKSLAEDRF 1615
+ L++V T Q ADIFTK L + F
Sbjct: 1276 VQLEYVKTHDQVADIFTKPLKREDF 1300
>At3g60170 putative protein
Length = 1339
Score = 750 bits (1937), Expect = 0.0
Identities = 418/1039 (40%), Positives = 604/1039 (57%), Gaps = 22/1039 (2%)
Query: 606 KHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSS---PCI 662
+ + W+LDSGCS HMTG K F EL+ V G + + ++G G++ V + I
Sbjct: 296 RDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVI 355
Query: 663 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 722
V V L +NLLS+ QL ++G ++ +C+ G+++ + N ++ + S+
Sbjct: 356 PEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASK 415
Query: 723 LEAQNVKCLLS---VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEAC 779
+ +N CL + +++E +WH R GH + + L+ +V GLP LK A+ +C C
Sbjct: 416 PQ-KNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILK-ATKEICAIC 473
Query: 780 QKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 839
GK + K +S L+L+H D+ GP+ S GKRY + +DD++R TWV FL
Sbjct: 474 LTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFL 533
Query: 840 TRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTP 899
K E+ A F F A V+ E + +R+D GGEF +++F S+GI+ + TP
Sbjct: 534 HEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTP 593
Query: 900 QQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWK 959
QQNGV ERKNRT+ R+ML E + K FW+E + +IQNR + TP E W
Sbjct: 594 QQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWS 653
Query: 960 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEES 1019
KP + YF FGC+ YV + K D KS KC+ LG S+ SK +R Y+ K I S
Sbjct: 654 GRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVIS 713
Query: 1020 IHVRFDD--KLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSN---SQT 1074
V FD+ D DQ+ + K L D K E VEP G N S
Sbjct: 714 KDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSP 773
Query: 1075 LKKSRITAAHPKELILGNKDEPVRTRSAFRPSE----ETLLSLKGLVSLIE--PKSIDEA 1128
+ A P + + P + + E E LS+ L+ + E P D+A
Sbjct: 774 ILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDA 833
Query: 1129 LQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVA 1188
++DK W AME E+ KN+ W L P+ IG KWV++ KLNE G+V + KARLVA
Sbjct: 834 VKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVA 893
Query: 1189 QGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQ 1248
+GY+Q GIDYTE FAPVARL+ +R +++ S N + Q+DVKSAFL+G + EEVYV Q
Sbjct: 894 KGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQ 953
Query: 1249 PPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1308
P GF E + + V+KL+K+LYGLKQAPRAWY R+ ++ L+ EF R + TLF KT +
Sbjct: 954 PEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGN 1013
Query: 1309 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1368
ILIV +YVDD+IF +++++C EF + M EFEMS +G++K+FLGI+V Q+ G +I Q
Sbjct: 1014 ILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQR 1073
Query: 1369 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1428
+Y +E+L +F M ES K P+ P L K++ KV + +++ ++GSL+YLT +RPD++
Sbjct: 1074 RYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLM 1133
Query: 1429 FSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMY--KKTSEYKLSGYCDADYAGDR 1486
+ V L +RF S+PR +H A KRILRYLKGT LG+ Y +K KL + D+DYAGD
Sbjct: 1134 YGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDL 1193
Query: 1487 TERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQIL 1546
+R+STSG + S + WASK+Q +ALST EAEYI+AA C+ Q +W++ LE
Sbjct: 1194 NDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAE 1253
Query: 1547 E-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADI 1605
E S I CDN++ I LSK+P+LH ++KHIEV++H++RD V V+ L++ T+ Q ADI
Sbjct: 1254 EKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADI 1313
Query: 1606 FTKSLAEDRFNFILKNLNM 1624
FTK L ++F + L M
Sbjct: 1314 FTKPLKLEQFEKLRALLGM 1332
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 719 bits (1857), Expect = 0.0
Identities = 401/1041 (38%), Positives = 594/1041 (56%), Gaps = 40/1041 (3%)
Query: 605 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICV---DSSPC 661
L+ W +DSGC+ HMT E+R F + + + G G I V
Sbjct: 321 LREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRI 380
Query: 662 IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLS 721
I NV LV GL NLLS+ Q+ GY V F K C + +G + N + + +KI+LS
Sbjct: 381 IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDANGKEIMNIEMTDKSFKIKLS 439
Query: 722 ELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQK 781
+E + + + E WH+RLGH S +++ Q+ LV GLP K + C+AC
Sbjct: 440 SVEEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNL 495
Query: 782 GKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTR 841
GK ++ F ++ T LE++H D+ GP++ +SI G RY ++ +DDY+ WV FL +
Sbjct: 496 GKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQ 555
Query: 842 KDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQ 901
K E+ A F F A V+ + C I +R E + GI + P +PQQ
Sbjct: 556 KSETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQ 605
Query: 902 NGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNK-TPYELWKN 960
NG ERKNR+L EMAR+ML E + WAE V T+ Y+QNR+ + I + TP E W
Sbjct: 606 NGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCG 665
Query: 961 IKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESI 1020
KPN+S+ FG +CYV + K DAK+ +L+GYS+++KG+R + + + +E S
Sbjct: 666 HKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSR 725
Query: 1021 HVRF--DDKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEE-----DEPEEEAGPSNSQ 1073
V F D K D D+ + V+K +SIN + + +E + D G ++S
Sbjct: 726 DVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSH 785
Query: 1074 TL-----KKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKG-LVSLIEPKSIDE 1127
L ++ R T+ PK+ + + ++ ++E ++ LV+ EP++ DE
Sbjct: 786 VLSQVNDQEERETSESPKKY---KSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDE 842
Query: 1128 ALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLV 1187
A DKEW AM EE+ KN W LV KPE +VI KW+++ K + G+ V++KARLV
Sbjct: 843 ARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLV 902
Query: 1188 AQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVH 1247
A+G+SQ+ GIDY ETFAPV+R + IR L++++ L+QMDVKSAFLNG + EEVYV
Sbjct: 903 ARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVT 962
Query: 1248 QPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD 1307
QPPGF E K + V +L K+LYGLKQAPRAWYER+ S+ ++N F R D L+ K +
Sbjct: 963 QPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGE 1022
Query: 1308 DILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQ 1367
D+LIV +YVDD+I N L F + M+ EFEM+ +G L YFLG++V+Q G ++ Q
Sbjct: 1023 DVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQ 1082
Query: 1368 SKYTKELLKKFNMLESTVAKTPMHPTCI---LEKEDKSGKVCQKLYRGMIGSLLYLTASR 1424
KY +L+ KF M ES TP+ P +E +DK K YR ++G LLYL ASR
Sbjct: 1083 EKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTK-YRRIVGGLLYLCASR 1141
Query: 1425 PDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAG 1484
PD++++ +R+ S P H KR+LRY+KGT+N G+++ +L GY D+D+ G
Sbjct: 1142 PDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGG 1201
Query: 1485 DRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQ 1544
++KST+G LG + W S +Q T+A STAEAEYI+ + Q +W++ ED+
Sbjct: 1202 SLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFG 1261
Query: 1545 I-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWA 1603
+ + IPI CDN +AI++ +NP+ H R KHIE+KYHF+R+ KG++ L++ + Q A
Sbjct: 1262 LKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLA 1321
Query: 1604 DIFTKSLAEDRFNFILKNLNM 1624
D+ TK+L+ RF + + L +
Sbjct: 1322 DVLTKALSVSRFEGLRRKLGV 1342
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 663 bits (1710), Expect = 0.0
Identities = 370/1040 (35%), Positives = 562/1040 (53%), Gaps = 50/1040 (4%)
Query: 594 LSMLQISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGT 653
L M + I + Q W+LDSGCS HM G + F EL V G + + + G G
Sbjct: 242 LLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGK 301
Query: 654 ICVDSS---PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSK 710
+ ++ I +V V GL +NL S+ QL KG I C + + ++ +S
Sbjct: 302 LRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHST 361
Query: 711 RKNN----IYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLP 766
N ++ E + +CL + + +WH+R GH + + + L++ +V+GLP
Sbjct: 362 MTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLP 421
Query: 767 NLKFASD-ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMV 825
+ A+C+ C KGK + ++ +++ L+L+H D+ GP+ S GKRY +
Sbjct: 422 KFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILN 481
Query: 826 IVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFD 885
+DD+SR W L+ K E+ F F A+V+ E ++V +RSD GGE+ + +F+
Sbjct: 482 FIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCK 541
Query: 886 SYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRIS 945
+GI + TPQQNGV ERKNR++ M R ML E + + FW E V A YI NR
Sbjct: 542 EFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSP 601
Query: 946 VRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKG 1005
+ + + TP E W + KP++ + FG + Y L + K D KS KC++ G S SK
Sbjct: 602 SKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKA 661
Query: 1006 FRFYNTDAKTIEESIHVRFDDKLD---SDQSKLVEKFADLSINVSDKGKAPE------EV 1056
+R Y+ I S V+FD++ D+S E D S + + PE +
Sbjct: 662 YRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQD 721
Query: 1057 EPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGL 1116
+ E +E EE + Q L ++ + KD V +E L
Sbjct: 722 QEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALF 781
Query: 1117 VSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEK 1176
+ +P +EA Q + W AME E+ +N+ W LV+ PE VIG KW+F+ K NEK
Sbjct: 782 IGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEK 841
Query: 1177 GDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1236
G+V + KARLVA+GY Q+ G+D+ E FAPVA+ + IRL++ + + Q+DVKSAFL
Sbjct: 842 GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 901
Query: 1237 NGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1296
+G + E+V+V QP GFE E++ V+KLKK+LYGLKQAPRAWY R+ F + F +
Sbjct: 902 HGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYC 961
Query: 1297 DTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV 1356
+ TLF K + D L+V +YVDD+I+ ++ + + F M EF M+ +G++KYFLG++V
Sbjct: 962 EHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEV 1021
Query: 1357 DQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGS 1416
Q G +I+Q KY E++KK+ M K P+ P +K K+G V
Sbjct: 1022 IQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPG---QKLTKAGAV----------- 1067
Query: 1417 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSG 1476
+R+ P E HL AVKRILRY++GT +LG+ Y++ +L G
Sbjct: 1068 ------------------SRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVG 1109
Query: 1477 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWM 1536
+ D+DYAGD +RKSTSG LG ++WASK+Q + LST EAE++SA+ + Q +W+
Sbjct: 1110 FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWL 1169
Query: 1537 KHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKF 1595
++ LE+ E ++CDN++ I LSKNP+LH R+KHI V+YHF+R+ V++G + L +
Sbjct: 1170 RNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDY 1229
Query: 1596 VDTDHQWADIFTKSLAEDRF 1615
T Q ADI TK++ + F
Sbjct: 1230 CTTTDQVADIMTKAVKREVF 1249
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 655 bits (1689), Expect = 0.0
Identities = 381/1045 (36%), Positives = 543/1045 (51%), Gaps = 112/1045 (10%)
Query: 586 ESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVG 639
++ Y+ ++ + L+A K + WYLDSG S HM G K MF EL G V
Sbjct: 305 KANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVA 364
Query: 640 FGGNEKGKIIGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSC 695
G K ++ G G I + I NV + + N+LS+ QL +KGYD+ +
Sbjct: 365 LGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Query: 696 RAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQ 755
+ + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 425 SIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGLEL 482
Query: 756 LSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTE 815
LS+ +VRGLP + + +CE C G K+ F ++ +PLEL+H D+ GP+K +
Sbjct: 483 LSRKEMVRGLPCINHPNQ-VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 816 SIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEF 875
S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GGEF
Sbjct: 542 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEF 601
Query: 876 ENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVN 935
+ +F + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K WAE V
Sbjct: 602 TSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVA 661
Query: 936 TACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCL 995
A Y+ NR + + KTP E W KP +S+ FG + + ++ +K D KS K +
Sbjct: 662 CAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYI 721
Query: 996 LLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEE 1055
+GY + SKG++ YN D K S ++ FD++ + D + E + DK + E
Sbjct: 722 FIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTRE 781
Query: 1056 VEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETL----L 1111
P E+ P++SQ + S + R RS E T L
Sbjct: 782 EPPSEEPTTPPTSPTSSQIEESS--------------SERTPRFRSIQELYEVTENQENL 827
Query: 1112 SLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRN 1171
+L L + EP EA++ K W AM+EE+ KND W L P IG KWV++
Sbjct: 828 TLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKA 887
Query: 1172 KLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDV 1231
K N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQMDV
Sbjct: 888 KKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDV 947
Query: 1232 KSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 1291
KSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ + E +F
Sbjct: 948 KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDF 1007
Query: 1292 VRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYF 1351
++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G + Y+
Sbjct: 1008 IKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYY 1067
Query: 1352 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 1411
LGI+V Q G +I Q Y KE+LKKF M +S +
Sbjct: 1068 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPS------------------------- 1102
Query: 1412 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSE 1471
++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y TS
Sbjct: 1103 -LVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTS- 1160
Query: 1472 YKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICST 1531
DY +C
Sbjct: 1161 ---------DY------------------------------------------KLVVCHA 1169
Query: 1532 QMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGV 1590
+W+++ L++ + E I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K
Sbjct: 1170 --IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKD 1227
Query: 1591 LLLKFVDTDHQWADIFTKSLAEDRF 1615
+ L++V T Q ADIFTK L + F
Sbjct: 1228 VQLEYVKTHDQVADIFTKPLKREDF 1252
>At3g25450 hypothetical protein
Length = 1343
Score = 635 bits (1638), Expect = 0.0
Identities = 368/1038 (35%), Positives = 568/1038 (54%), Gaps = 41/1038 (3%)
Query: 607 HQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSS----PCI 662
+ +WYLD+G S HMTG + F +L G+V FG + I G G+I S +
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKIL 348
Query: 663 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLS 721
+V + L N+LS+ Q + G D+ + + +G++L ++R +N +YK+
Sbjct: 349 FDVYYIPDLKSNILSLGQATESGCDIRMREDYL-TLHDREGNLLIKAQRSRNRLYKV--- 404
Query: 722 ELEAQNVKCL-LSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQ 780
LE +N KCL L+ E +WH RLGH S I + K LV G+ + C +C
Sbjct: 405 SLEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCL 464
Query: 781 KGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLT 840
GK + F ++ LEL+H DL GP+ + KRY V++DD+SR+ W L
Sbjct: 465 FGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLK 524
Query: 841 RKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQ 900
K E+ F F A V+ E I R+D GGEF + +F+ GI + P TPQ
Sbjct: 525 EKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQ 584
Query: 901 QNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKN 960
QNGVVER+NRTL M R++L+ M + W E V + Y+ NR+ R + N+TPYE++K+
Sbjct: 585 QNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKH 644
Query: 961 IKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESI 1020
KPN+ + FGCV Y L K D +S + LG SK +R + + I S
Sbjct: 645 KKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSR 704
Query: 1021 HVRFDDKLD----SDQSKLVEKFADLSINVSD---KGKAPEEVEPEEDEPEEEAGPSNSQ 1073
V FD+ S+ ++ +I +S+ G ++ E +E EE +
Sbjct: 705 DVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDE 764
Query: 1074 TLKKSRITAAHPKELILGNKDEPVRT--RSAFRPS-------------EETLLSLKGLVS 1118
+ + T H + + +PVR R RP+ E LL++
Sbjct: 765 NIIEEAETEEHDQSQ---EEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND--- 818
Query: 1119 LIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGD 1178
EP EA + KEW A +EE+ KN WSLV P IG KWVF+ K N G
Sbjct: 819 --EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGS 876
Query: 1179 VVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1238
+ + KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+I+ + ++ +H +DVK+AFL+G
Sbjct: 877 INKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHG 936
Query: 1239 YISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1298
+ E+VYV QP GF +++ + V+KL K+LYGL+QAPRAW +L+ L E +F + +
Sbjct: 937 ELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEP 996
Query: 1299 TLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQ 1358
+L+ K ++IL+V +YVDD++ +N + F + M +FEMS +G+L Y+LGI+V Q
Sbjct: 997 SLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQ 1056
Query: 1359 TPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLL 1418
+ +G + Q +Y K++L++ M + TPM + L K ++ + YR IG L
Sbjct: 1057 SKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLR 1116
Query: 1419 YLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1478
YL +RPD+ ++V + +R+ +PRE+H A+K+ILRYL+GTT+ GL +KK L GY
Sbjct: 1117 YLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYS 1176
Query: 1479 DADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKH 1538
D+ + D + KST G+ +L ++W S++Q + LS+ EAE+++A + Q +W++
Sbjct: 1177 DSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQE 1236
Query: 1539 QLEDYQILE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVD 1597
L + E + I DN +AI+L+KNP+ H R+KHI +YHFIR+ V+ G + ++ V
Sbjct: 1237 LLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHVP 1296
Query: 1598 TDHQWADIFTKSLAEDRF 1615
Q ADI TK+L + +F
Sbjct: 1297 GVRQKADILTKALGKIKF 1314
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 628 bits (1620), Expect = e-180
Identities = 364/1037 (35%), Positives = 565/1037 (54%), Gaps = 37/1037 (3%)
Query: 605 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSSPCIDN 664
L +W +DSG + H++ ++++F+ L V +I G GT+ ++ + N
Sbjct: 437 LSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQN 496
Query: 665 VLLVDGLTHNLLSISQLA-DKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 723
VL + NL+SIS L D G VIF+ C+ G L KR N+Y + ++
Sbjct: 497 VLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD-TQS 555
Query: 724 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 783
A +V ++ V+ VWH+RLGH S ++ LS+ V G K A C C K
Sbjct: 556 PAISVNAVVDVS----VWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLAK 608
Query: 784 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 843
K+ F + N + S ELLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 609 QKKLSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKS 667
Query: 844 ESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 903
+ VF FI V+N+ R+ VRSD E F + + GI SCP TP+QN
Sbjct: 668 DVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETPEQNS 724
Query: 904 VVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKNIKP 963
VVERK++ + +AR ++ ++ M+ +W + V TA ++ NR + NKTP+E+ P
Sbjct: 725 VVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLP 784
Query: 964 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1023
+ S FGC+CY + + HKF +S C+ LGY KG++ + ++ + S +V
Sbjct: 785 DYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVE 844
Query: 1024 FDDKL----DSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSR 1079
F ++L S QS ++ G + P + PS + K R
Sbjct: 845 FHEELFPLASSQQSATTASDVFTPMDPLSSGNSITS-----HLPSPQISPSTQ--ISKRR 897
Query: 1080 ITA--AHPKEL--ILGNKDE--PVRTRSAFRP-SEETLLSLKGLVSLIEPKSIDEALQDK 1132
IT AH ++ NKD+ P+ + ++ S +L + + + P+S EA K
Sbjct: 898 ITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSK 957
Query: 1133 EWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYS 1192
EW A+++E+ + D W + P +G KWVF K + G + R KAR+VA+GY+
Sbjct: 958 EWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYT 1017
Query: 1193 QQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGF 1252
Q+EG+DYTETF+PVA++ ++LL+ S + L+Q+D+ +AFLNG + E +Y+ P G+
Sbjct: 1018 QKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGY 1077
Query: 1253 EDEK----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1308
D K P+ V +LKKS+YGLKQA R W+ + S+ LL F + D TLF + +
Sbjct: 1078 ADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSE 1137
Query: 1309 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1368
+++ +YVDDI+ S + + +E ++A F++ +G LKYFLG++V +T EG + Q
Sbjct: 1138 FIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQR 1197
Query: 1369 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1428
KY ELL +ML+ + PM P L K D +++YR ++G L+YLT +RPDI
Sbjct: 1198 KYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDIT 1257
Query: 1429 FSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTE 1488
F+V+ +F S PR HL AV ++L+Y+KGT GL Y + L GY DAD+
Sbjct: 1258 FAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDS 1317
Query: 1489 RKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILES 1548
R+ST+G F+GS+L+SW SK+Q T++ S+AEAEY + A+ S +M W+ L ++ S
Sbjct: 1318 RRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRV-HS 1376
Query: 1549 NIPI-YCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFT 1607
+PI Y D+TAA+ ++ NP+ H R KHIE+ H +R+ + G L L V T Q ADI T
Sbjct: 1377 GVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILT 1436
Query: 1608 KSLAEDRFNFILKNLNM 1624
K L +F +L +++
Sbjct: 1437 KPLFPYQFAHLLSKMSI 1453
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 622 bits (1603), Expect = e-178
Identities = 358/1037 (34%), Positives = 563/1037 (53%), Gaps = 33/1037 (3%)
Query: 605 LKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSSPCIDN 664
L +W +DSG + H++ ++ +F L V KI G GT+ ++ + N
Sbjct: 426 LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKN 485
Query: 665 VLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 723
VL + NL+SIS L D G VIF++ SC I G +L +R N+Y + + +
Sbjct: 486 VLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGD- 544
Query: 724 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 783
++ +V ++ ++ +WHRRLGHAS++++ +S G K C C K
Sbjct: 545 QSISVNAVVDIS----MWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHLAK 597
Query: 784 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 843
K+ F N V +LLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 598 QRKLSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKS 656
Query: 844 ESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 903
E VF FI QV+N+ ++ VRSD E KF S + GI SCP TP+QN
Sbjct: 657 EVLTVFPAFIQQVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNS 713
Query: 904 VVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKNIKP 963
VVERK++ + +AR ++ ++ + W + V TA ++ NR + ++NKTPYE+ P
Sbjct: 714 VVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAP 773
Query: 964 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVR 1023
FGC+CY + + HKF +S CL LGY KG++ + ++ T+ S +V+
Sbjct: 774 VYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQ 833
Query: 1024 FDDKL--------DSDQSKLVEKFADLSINV-SDKGKAPEEVEPE-EDEPEEEAGPSNSQ 1073
F +++ KL +S + SD +P + + D P + +SQ
Sbjct: 834 FHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQ----ISSQ 889
Query: 1074 TLKK--SRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKSIDEALQD 1131
++K + + H + +K T S + S + + + + P + EA
Sbjct: 890 RVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDT 949
Query: 1132 KEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGY 1191
KEW A++ E+ K + W + P+ +G KWVF K G++ R KARLVA+GY
Sbjct: 950 KEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGY 1009
Query: 1192 SQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPG 1251
+Q+EG+DYT+TF+PVA++ I+LL+ S + L Q+DV +AFLNG + EE+++ P G
Sbjct: 1010 TQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEG 1069
Query: 1252 FEDEK----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD 1307
+ + K + V +LK+S+YGLKQA R W+++ SS LL F + D TLF K Y
Sbjct: 1070 YAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDG 1129
Query: 1308 DILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQ 1367
+ +IV +YVDDI+ S +++ + +E + F++ +G+LKYFLG++V +T G I Q
Sbjct: 1130 EFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQ 1189
Query: 1368 SKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDI 1427
KY ELL+ ML PM P + K+D + YR ++G L+YLT +RPDI
Sbjct: 1190 RKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDI 1249
Query: 1428 LFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRT 1487
F+V+ +F S PR THLTA R+L+Y+KGT GL Y +S+ L G+ D+D+A +
Sbjct: 1250 TFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQD 1309
Query: 1488 ERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILE 1547
R+ST+ F+G +L+SW SK+Q T++ S+AEAEY + A+ + +M+W+ L Q
Sbjct: 1310 SRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASP 1369
Query: 1548 SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFT 1607
+Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L L V T+ Q ADI T
Sbjct: 1370 PVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILT 1429
Query: 1608 KSLAEDRFNFILKNLNM 1624
K L +F + +++
Sbjct: 1430 KPLFPYQFEHLKSKMSI 1446
>At1g70010 hypothetical protein
Length = 1315
Score = 586 bits (1510), Expect = e-167
Identities = 346/1002 (34%), Positives = 531/1002 (52%), Gaps = 35/1002 (3%)
Query: 651 TGTICVDSSPCIDNVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNS 709
+G++ + +++VL + NLLS+S L G + F++ SC ++
Sbjct: 314 SGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMG 373
Query: 710 KRKNNIYKIRLSELEAQNVKCLLSVNE--EQWVWHRRLGHASMRKISQLSKLNLVRGLPN 767
K+ N+Y + L L ++V +WH+RLGH S++K+ +S L P
Sbjct: 374 KQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSL---LSFPK 430
Query: 768 LKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIV 827
K +D C C K +PF + N S SRP +L+HID +GP ++ G RY + IV
Sbjct: 431 QKNNTDFHCRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYRYFLTIV 489
Query: 828 DDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSY 887
DDYSR TWV L K + V TF+ V+N+ I VRSD E F + S
Sbjct: 490 DDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSK 546
Query: 888 GIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVR 947
GI SCP TPQQN VVERK++ + +AR++ ++ + +W + + TA Y+ NR+
Sbjct: 547 GIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAP 606
Query: 948 PILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFR 1007
+ +K P+E+ P + FGC+CY + HKF ++ C +GY KG++
Sbjct: 607 ILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYK 666
Query: 1008 FYNTDAKTIEESIHVRFDDKL----DSDQSKLVEKF-ADLS------------INVSDKG 1050
+ + +I S HV F ++L SD S+ + F DL+ +N SD
Sbjct: 667 LLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSS 726
Query: 1051 KAPE---EVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSE 1107
+ E P + PE S+ + K + + + ++ E + S R ++
Sbjct: 727 SSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRIND 786
Query: 1108 ETLLSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKW 1167
L L L EP + EA + + W AM E + W + P IG +W
Sbjct: 787 PYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRW 846
Query: 1168 VFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1227
+F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA+L +++LL+ + + L
Sbjct: 847 IFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLT 906
Query: 1228 QMDVKSAFLNGYISEEVYVHQPPGFE----DEKKPDHVFKLKKSLYGLKQAPRAWYERLS 1283
Q+D+ +AFLNG + EE+Y+ P G+ D P+ V +LKKSLYGLKQA R WY + S
Sbjct: 907 QLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFS 966
Query: 1284 SFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMS 1343
S LL F++ D T F K L V +Y+DDII S N + M++ F++
Sbjct: 967 STLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLR 1026
Query: 1344 MMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSG 1403
+GELKYFLG+++ ++ +G +I Q KY +LL + L + PM P+ + +
Sbjct: 1027 DLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGD 1086
Query: 1404 KVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLG 1463
V YR +IG L+YL +RPDI F+V+ A+F PR+ HL AV +IL+Y+KGT G
Sbjct: 1087 FVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQG 1146
Query: 1464 LMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEY 1523
L Y TSE +L Y +ADY R R+STSG C FLG +L+ W S++Q ++ S+AEAEY
Sbjct: 1147 LFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEY 1206
Query: 1524 ISAAICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1582
S ++ + +++W+ + L++ Q+ L ++CDN AAI ++ N + H R KHIE H +
Sbjct: 1207 RSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSV 1266
Query: 1583 RDYVQKGVLLLKFVDTDHQWADIFTKSLAEDRFNFILKNLNM 1624
R+ + KG+ L ++T+ Q AD FTK L F+ ++ + +
Sbjct: 1267 RERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGL 1308
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 585 bits (1508), Expect = e-167
Identities = 352/1044 (33%), Positives = 555/1044 (52%), Gaps = 47/1044 (4%)
Query: 608 QSWYLDSGCSRHMTGEKRMFRELKLKPGGE-VGFGGNEKGKIIGTGTICVDSSPC---ID 663
+ W+ DS + H+T + G + V G I TG+ + SS ++
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 664 NVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 722
VL+V + +LLS+S+L D V F+ + V+ R+N +Y + E
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQE 439
Query: 723 LEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKG 782
A + EE VWH RLGHA+ + + L ++ K + +CE CQ G
Sbjct: 440 FVALYSNRQCAATEE--VWHHRLGHANSKALQHLQNSKAIQ---INKSRTSPVCEPCQMG 494
Query: 783 KFTKVPFKAKNVVSTSR---PLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 839
K +++PF ++S SR PL+ +H DL+GP S G +Y + VDDYSR++W L
Sbjct: 495 KSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPL 550
Query: 840 TRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTP 899
K E +VF +F V+N+ +I +SD GGEF ++K ++ +GI H SCP TP
Sbjct: 551 HNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610
Query: 900 QQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWK 959
QQNG+ ERK+R L E+ +ML + + FW E+ TA YI NR+ + N +PYE
Sbjct: 611 QQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALF 670
Query: 960 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFR-FYNTDAK---- 1014
KP+ S FG CY +KFD +S +C+ LGY+ + KG+R FY K
Sbjct: 671 GEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYIS 730
Query: 1015 --TIEESIHVRFDDKLDS----DQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAG 1068
I + F +K S + L++ + I+ AP ++ + + AG
Sbjct: 731 RNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDLNTYAG 790
Query: 1069 PSNSQTLKKSRITA----------------AHPKELILGNKDEPVRTRSAFRPSEETLLS 1112
++ L T+ A +E ++ + R+++ +
Sbjct: 791 SQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRSKAGIQKPNTRYAL 850
Query: 1113 LKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNK 1172
+ ++ EPK++ A++ W A+ EE+N+ WSLV + ++++ +KWVF+ K
Sbjct: 851 ITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTK 910
Query: 1173 LNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVK 1232
L+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL++ S + + Q+DV
Sbjct: 911 LHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVS 970
Query: 1233 SAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFV 1292
+AFL+G + E V+++QP GF D +KP HV +L K++YGLKQAPRAW++ S+FLL+ FV
Sbjct: 971 NAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFV 1030
Query: 1293 RGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFL 1352
K D +LF IL + +YVDDI+ ++QSL ++ + ++ F M +G +YFL
Sbjct: 1031 CSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFL 1090
Query: 1353 GIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRG 1412
GIQ++ G ++HQ+ Y ++L++ M + TP+ L+ + +R
Sbjct: 1091 GIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQ--LDNLNSELFAEPTYFRS 1148
Query: 1413 MIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEY 1472
+ G L YLT +RPDI F+V+ + P + +KRILRY+KGT +GL K+ S
Sbjct: 1149 LAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTL 1208
Query: 1473 KLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQ 1532
LS Y D+D+AG + R+ST+G C LGSNL+SW++KRQ T++ S+ EAEY + + +
Sbjct: 1209 TLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAARE 1268
Query: 1533 MLWMKHQLEDYQILE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVL 1591
+ W+ L D I + +YCDN +A+ LS NP LH+R+KH + YH+IR+ V G++
Sbjct: 1269 ITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLI 1328
Query: 1592 LLKFVDTDHQWADIFTKSLAEDRF 1615
+ + Q AD+FTKSL F
Sbjct: 1329 ETQHISATFQLADVFTKSLPRRAF 1352
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 581 bits (1497), Expect = e-165
Identities = 356/1032 (34%), Positives = 547/1032 (52%), Gaps = 60/1032 (5%)
Query: 609 SWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSS----PCIDN 664
SWYLD+G S HMTG + F +L G+V FG + + I G G+I + + + +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 665 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLSEL 723
V + L N++S+ Q + G DV + +G +L + R +N +YK+ +L
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQL-TLHDREGCLLLRATRSRNRLYKV---DL 394
Query: 724 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 783
+NVKCL + + + + LV G+ N+ + C +C GK
Sbjct: 395 NVENVKCL------------------QLEAATMVRKELVIGISNIPKEKET-CGSCLLGK 435
Query: 784 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 843
+ PF S+ LEL+H DL GP+ + KRY +V++DD++R+ W L K
Sbjct: 436 QARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKS 495
Query: 844 ESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQNG 903
E+ F F +V+ E +I R+D GGEF + +F+ GI + P TPQQNG
Sbjct: 496 EAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNG 555
Query: 904 VVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKNIKP 963
VVER+NRTL M R++L+ M + W E V + YI NR+ R + N+TPYE++K KP
Sbjct: 556 VVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKP 615
Query: 964 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYN-TDAKTIEESIHV 1022
N+ + FGC+ Y L K D +S + LG SK +R + T+ K I+ +
Sbjct: 616 NVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSD 675
Query: 1023 RFDDKLDSDQSKLVEKFADLSINVSD------KGKAPEEVEPEEDEPE---------EEA 1067
+ S + +F + I SD G+ E EE E E EE
Sbjct: 676 SETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEET 735
Query: 1068 GPSNSQ---TLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLIEPKS 1124
PS++ TL++S P L D+ V E+ LL++ EP
Sbjct: 736 QPSHATPLPTLRRSTRQVGKPNYL-----DDYVLMAEI--EGEQVLLAIND-----EPWD 783
Query: 1125 IDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKA 1184
EA + KEW A +EE+ KN WSL+ P VIG KWVF+ K N G + + KA
Sbjct: 784 FKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKA 843
Query: 1185 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1244
RLVA+GY Q+ GIDY E FA VAR+E IR++I+ + ++ +H +DVK+AFL+G + E+V
Sbjct: 844 RLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDV 903
Query: 1245 YVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKT 1304
YV QP GF ++ V+KL K+LYGLKQAPRAW +L+ L E FV+ + +++ +
Sbjct: 904 YVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQ 963
Query: 1305 YKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTY 1364
+ +LIV IYVDD++ ++ L F + M +FEMS +G+L Y+LGI+V G
Sbjct: 964 EEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGII 1023
Query: 1365 IHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASR 1424
+ Q +Y +++++ M PM L K + + ++ YR MIG L Y+ +R
Sbjct: 1024 LRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTR 1083
Query: 1425 PDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAG 1484
PD+ + V + +R+ PRE+H A+K++LRYLKGT + GL K+ + L GY D+ ++
Sbjct: 1084 PDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSA 1143
Query: 1485 DRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQL-EDY 1543
D + KST+G+ +L ++W S++Q +ALS+ EAE+++A + Q +W++ E
Sbjct: 1144 DLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVC 1203
Query: 1544 QILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWA 1603
+ I DN +AI+L+KN + H R+KHI +YHFIR+ V+ ++ + V Q A
Sbjct: 1204 GTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRA 1263
Query: 1604 DIFTKSLAEDRF 1615
DI TK L +F
Sbjct: 1264 DILTKPLGRIKF 1275
>At1g37110
Length = 1356
Score = 551 bits (1420), Expect = e-156
Identities = 353/1093 (32%), Positives = 562/1093 (51%), Gaps = 77/1093 (7%)
Query: 586 ESGYLRTRLSMLQ-ISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNE 644
E+G + +L + +S+ + W LDSGC+ HMT + F + K + G +
Sbjct: 283 EAGVITEKLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDH 342
Query: 645 KGKIIGTGTICVDSS----PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQ 700
+ G GTI +D+ ++NV V L NL+S L GY + R
Sbjct: 343 SVESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFK- 401
Query: 701 IDGSVLFNSKRKNNIYKIR----LSEL---EAQNVKCLLSVNEEQWVWHRRLGHASMRKI 753
+ N +Y + +SEL E VK L WH RLGH SM +
Sbjct: 402 -NNKTALRGSLSNGLYVLDGSTVMSELCNAETDKVKTAL--------WHSRLGHMSMNNL 452
Query: 754 SQLSKLNLV--RGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFG- 810
L+ L+ + + L+F CE C GK KV F S L +H DL+G
Sbjct: 453 KVLAGKGLIDRKEINELEF-----CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGS 506
Query: 811 PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSD 870
P T SI GK+Y + I+DD +R W+ FL KDE+ F + + V+N+ ++ +R+D
Sbjct: 507 PNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTD 566
Query: 871 LGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFW 930
G EF N +F+S +GI +C TPQQNGV ER NRT+ E R +L ++G+ + FW
Sbjct: 567 NGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFW 626
Query: 931 AETVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAK 990
AE TA Y+ NR I + P E+W N KP + FG + YV + +L +
Sbjct: 627 AEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKP---R 683
Query: 991 SSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFDDKL----------DSDQSKLVE--- 1037
+ K LGY +KG++ + + + S +V F + + D+D E
Sbjct: 684 ALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTS 743
Query: 1038 ------KFADLSIN------VSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAH- 1084
KFA+ S + SD E + + E E E +T K++ +T
Sbjct: 744 SEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKL 803
Query: 1085 PKELILGNKDEPVRTRSAFRPSEETLLSLKGLVSLI--EPKSIDEALQDKE---WILAME 1139
++ + N + P R F +L + + I EP+S EA++ ++ W +A
Sbjct: 804 ARDRVRRNINPPTR----FTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATH 859
Query: 1140 EELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGID 1198
+E++ KN W LV KP+ +IG +W+F+ K G + R KARLVA+GY+Q+EG+D
Sbjct: 860 DEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVD 919
Query: 1199 YTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKKP 1258
Y E FAPV + +IR+L+S V+ ++ L QMDVK+ FL+G + EE+Y+ QP GF +
Sbjct: 920 YQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSE 979
Query: 1259 DHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD-DILIVQIYVD 1317
+ V +LKKSLYGLKQ+PR W +R F+ +F+R + D ++ K + D + + +YVD
Sbjct: 980 NKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVD 1039
Query: 1318 DIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSK--YTKELL 1375
D++ A+++ E + EFEM MG LGI + + +G + S+ Y +++L
Sbjct: 1040 DMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVL 1099
Query: 1376 KKFNMLESTVAKTPM---HPTCILEKEDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSV 1431
+FNM + + P+ + +ED+ Y +GS++Y + +RPD+ +++
Sbjct: 1100 DRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAI 1159
Query: 1432 HLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKS 1491
L +R+ S P H AVK ++RYLKG +L L++ K ++ ++GYCD++YA D R+S
Sbjct: 1160 CLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRS 1219
Query: 1492 TSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIP 1551
SG +G N VSW + Q +A+ST EAEYI+ A + + +W+K L+D + + +
Sbjct: 1220 ISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVK 1279
Query: 1552 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKSLA 1611
I+CD+ +AI LSKN + H R KHI+V++++IRD V+ G + + + T D TK +
Sbjct: 1280 IWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIP 1339
Query: 1612 EDRFNFILKNLNM 1624
++F L L +
Sbjct: 1340 VNKFKSALGVLKL 1352
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 546 bits (1408), Expect = e-155
Identities = 354/1079 (32%), Positives = 563/1079 (51%), Gaps = 62/1079 (5%)
Query: 589 YLRTRLSMLQISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKI 648
Y+ LS I L W +D+GCS HMT ++ F +L GG V G K+
Sbjct: 271 YVSEALSSTDIHL-----EDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKV 325
Query: 649 IGTGTICVDSSPC----IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGS 704
G GTI V + + NV + + NLLS+ GY + ++ S
Sbjct: 326 RGIGTIRVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIA--GDS 383
Query: 705 VLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG 764
VL +R +Y ++ + +++ ++ ++ +WHRRLGH S + + L K L
Sbjct: 384 VLLTVRRCYTLYLLQWRPVTEESLS-VVKRQDDTILWHRRLGHMSQKNMDLLLKKGL--- 439
Query: 765 LPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYG 823
L K + CE C GK ++ F T LE +H DL+G P S+G +Y
Sbjct: 440 LDKKKVSKLETCEDCIYGKAKRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYF 498
Query: 824 MVIVDDYSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESL 883
+ +DDY+R + FL KDE+ F + V+N+ RI +R+D G EF N F+
Sbjct: 499 ISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEF 558
Query: 884 FDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNR 943
GI +C TPQQNGV ER NRTL E R+ML ++G+ K FWAE +T + N+
Sbjct: 559 CSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINK 618
Query: 944 ISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRS 1003
+ + P + W P SY FGC+ +V +T D K + ++ K +L+GY
Sbjct: 619 TPSSALNYEVPDKRWSGKSPIYSYLRRFGCIAFV-HTDDG--KLNPRAKKGILVGYPIGV 675
Query: 1004 KGFRFYNTDAKTIEESIHVRFDDKL---DSDQSKLVEK---------FADLSIN----VS 1047
KG++ + + K S +V F + D QSK EK + DL ++ ++
Sbjct: 676 KGYKIWLLEEKKCVVSRNVIFQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVIT 735
Query: 1048 DKGKAP--EEVEPEEDEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRT-RSAFR 1104
G P E P P S + I + +L+ +D RT R+ R
Sbjct: 736 SGGDDPIVEAQSPFNPSPATTQTYSEGVNSETDIIQSPLSYQLV---RDRDRRTIRAPVR 792
Query: 1105 PSEETLLSLKGLVSL-----IEPKSIDEALQD---KEWILAMEEELNQFSKNDVWSLVKK 1156
+E L+ + L + IEP EA + +W LAM EE+ KN W++VK+
Sbjct: 793 FDDEDYLA-EALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKR 851
Query: 1157 PESVHVIGTKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLL 1215
P+ VIG++W+++ KL G + R KARLVA+GY+Q++GIDY E FAPV + +IR+L
Sbjct: 852 PQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRIL 911
Query: 1216 ISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAP 1275
+S ++ L Q+DVK+AFL+G + E++Y+ P G+E+ K D V L KSLYGLKQAP
Sbjct: 912 MSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAP 971
Query: 1276 RAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSE 1334
+ W E+ ++++ E F+R D+ + K D + + +YVDD++ + N+ + E
Sbjct: 972 KQWNEKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKE 1031
Query: 1335 MMQAEFEMSMMGELKYFLGIQVDQTPEGT--YIHQSKYTKELLKKFNMLESTVAKTPMHP 1392
+ F+M +G K LG+++ + E ++ Q+ Y ++L+ +NM ES TP+
Sbjct: 1032 ELSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGA 1091
Query: 1393 -----TCILEKEDKSGKVCQKL-YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETH 1445
+EK+++ + + Y +GS++Y + +RPD+ + V + +R+ S P H
Sbjct: 1092 HLKMRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREH 1151
Query: 1446 LTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVS 1505
VK +LRY+KG+ L YK++S++K+ GYCDAD+A + R+S +G LG + +S
Sbjct: 1152 WLGVKWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTIS 1211
Query: 1506 WASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKN 1565
W S +Q +ALST EAEY+S + +WMK L+++ + ++ I+CD+ +AI+LSKN
Sbjct: 1212 WKSGQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKN 1271
Query: 1566 PILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKSLAEDRFNFILKNLNM 1624
+ H R KHI+V+Y +IRD + G + +DT+ ADIFTK + ++F L L +
Sbjct: 1272 NVHHERTKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLLQV 1330
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 541 bits (1393), Expect = e-153
Identities = 348/1067 (32%), Positives = 546/1067 (50%), Gaps = 71/1067 (6%)
Query: 610 WYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSSP----CIDNV 665
W LD+GCS HMT K F++ K G V G + + G G+I + +S + +V
Sbjct: 285 WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDV 344
Query: 666 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 725
+ +T NL+S+ L D+G + V S + ++++ +Y + E
Sbjct: 345 RYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGC--STILKGQKRDTLYILDGVTEEG 402
Query: 726 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG--LPNLKFASDALCEACQKGK 783
++ V +E +WH RLGH S + + L K +R + L+F CE C GK
Sbjct: 403 ESHSSA-EVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEF-----CEDCVYGK 456
Query: 784 FTKVPFKAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRK 842
+V F V T L +H DL+G P S+G +Y + VDDYSR W+ FL +K
Sbjct: 457 QHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKK 515
Query: 843 DESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQN 902
DE+ F + V+N+ ++ ++R+D G E+ N FE GI +C TPQQN
Sbjct: 516 DEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQN 575
Query: 903 GVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKNIK 962
G+ ER NRT+ + R+ML +GM K FWAE +TA Y+ NR I P E W
Sbjct: 576 GIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGAL 635
Query: 963 PNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHV 1022
P++S FGC+ Y+ + +L + +S K + Y + KG++ + + K S +V
Sbjct: 636 PDLSSLRKFGCLAYIHADQGKL---NPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNV 692
Query: 1023 RF-------DDKLDSDQSKLVEKFADLSIN-------VSDKGKAPEE-VEPEE------- 1060
F D K DS + DL +N +D+G A ++ P E
Sbjct: 693 IFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNP 752
Query: 1061 ---------DEPEEEAGPSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPSEETLL 1111
DE EE + L ++ + I N F E
Sbjct: 753 VLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSED-- 810
Query: 1112 SLKGLVSLIEPKSIDEALQD---KEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWV 1168
EPKS EAL D ++W AM+EE+ SKN W LV KPE V +IG +WV
Sbjct: 811 -----DGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWV 865
Query: 1169 FRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1227
F K G + R ARLVA+G++Q+EG+DY E F+PV + +IR L+S V++N+ L
Sbjct: 866 FTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQ 925
Query: 1228 QMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1287
QMDVK+AFL+G++ EE+Y+ QP GFE ++ + V LK+SLYGLKQ+PR W R F+
Sbjct: 926 QMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMR 985
Query: 1288 ENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG 1346
++ R D+ ++ K D I + +YVDD++ SAN+S E +++ EFEM +G
Sbjct: 986 GIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLG 1045
Query: 1347 ELKYFLGIQVDQTPEG--TYIHQSKYTKELLKKFNMLESTVAKTP------MHPTCILEK 1398
+ K LG+++ + + + Q Y K++L+ F M + TP + E
Sbjct: 1046 DAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEY 1105
Query: 1399 EDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLK 1457
E++ ++ Y IGS++Y + +RPD+ +S+ + +RF S P + H AVK +LRY++
Sbjct: 1106 EEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Query: 1458 GTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALS 1517
GT L ++K ++ L GYCD+DY + R+S +G +G N +SW SK Q +A+S
Sbjct: 1166 GTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAIS 1225
Query: 1518 TAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEV 1577
+ EAEY++ + LW+K + + + ++ D+ +AI+L+KN + H R KHI++
Sbjct: 1226 STEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDI 1285
Query: 1578 KYHFIRDYVQKGVLLLKFVDTDHQWADIFTKSLAEDRFNFILKNLNM 1624
+ HFIRD + G++ + + T+ A+IFTK++ +F L L +
Sbjct: 1286 RLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFEGALNMLRV 1332
>At4g17450 retrotransposon like protein
Length = 1433
Score = 531 bits (1369), Expect = e-151
Identities = 327/1042 (31%), Positives = 525/1042 (50%), Gaps = 72/1042 (6%)
Query: 608 QSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDSSPCIDNVLL 667
+ W +DSG + H+T + ++ + V + KI G G I + + + NVL
Sbjct: 430 RGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLHNVLY 489
Query: 668 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 727
+ NL+S + + SQ+ + + N+ ++ +
Sbjct: 490 IPEFKFNLIS----------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPE 539
Query: 728 VKCLLSVNEEQWVWHRRLGHASMRKISQLSK-LNL-VRGLPNLKFASDALCEACQKGKFT 785
SV + WH+RLGH + KI LS LNL V+ + +C C K
Sbjct: 540 FSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQK 599
Query: 786 KVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 845
+ F+++ + S +L+HID +GP + TW+ L K +
Sbjct: 600 HLSFQSRQNMC-SAAFDLVHIDTWGPFSVPTNDA--------------TWIYLLKNKSDV 644
Query: 846 HAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCPRTPQQNGVV 905
VF FI V + ++ VRSD E KF LF ++GI SCP TP+QN VV
Sbjct: 645 LHVFPAFINMVHTQYQTKLKSVRSDNAHEL---KFTDLFAAHGIVAYHSCPETPEQNSVV 701
Query: 906 ERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYELWKNIKPNI 965
ERK++ + +AR +L ++ + FW + V TA ++ NR+ + NK+PYE KNI P
Sbjct: 702 ERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAY 761
Query: 966 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTIEESIHVRFD 1025
FGC+CY + + HKF+ ++ C+ LGY KG++ + + + S HV F
Sbjct: 762 ESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFH 821
Query: 1026 DKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEEDEPEEEAGPSNSQTLKKSRITAAHP 1085
+ + F +S + D K + P P ++ L+++ I HP
Sbjct: 822 EDI----------FPFISSTIKDDIK---DFFPLLQFPAR----TDDLPLEQTSIIDTHP 864
Query: 1086 KELILGNKD----EPVRTRSAFRP------------SEETLLSLKGLVSLIEPKSIDEAL 1129
+ + +K +P+ R P +E + + + + P+ EA
Sbjct: 865 HQDVSSSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPFHAFINNITNAVIPQRYSEAK 924
Query: 1130 QDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQ 1189
K W AM+EE+ + + WS+V P + IG KWVF K N G + R KARLVA+
Sbjct: 925 DFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAK 984
Query: 1190 GYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQP 1249
GY+Q+EG+DY ETF+PVA+L ++R+++ + +HQ+D+ +AFLNG + EE+Y+ P
Sbjct: 985 GYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIP 1044
Query: 1250 PGFED---EKKPDH-VFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTY 1305
PG+ D E P H + +L KS+YGLKQA R WY +LS+ L F + D TLF K
Sbjct: 1045 PGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYA 1104
Query: 1306 KDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYI 1365
++ V +YVDDI+ S + +F+ +++ F++ +G KYFLGI++ ++ +G I
Sbjct: 1105 NGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISI 1164
Query: 1366 HQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRP 1425
Q KY ELL L S + P+ P+ L KED YR ++G L+YL +RP
Sbjct: 1165 CQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRP 1224
Query: 1426 DILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGD 1485
DI ++V+ +F P HL+AV ++LRYLKGT GL Y ++ L GY D+D+
Sbjct: 1225 DIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSC 1284
Query: 1486 RTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQMLWMKHQLEDYQI 1545
R+ + C F+G LVSW SK+Q T+++STAEAE+ + + + +M+W+ +D+++
Sbjct: 1285 TDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKV 1344
Query: 1546 LESNIP---IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGVLLLKFVDTDHQW 1602
IP +YCDNTAA+ + N + H R K +E+ + R+ V+ G L FV+T Q
Sbjct: 1345 --PFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETGEQV 1402
Query: 1603 ADIFTKSLAEDRFNFILKNLNM 1624
AD TK++ +F+ ++ + +
Sbjct: 1403 ADPLTKAIHPAQFHKLIGKMGV 1424
>At1g26990 polyprotein, putative
Length = 1436
Score = 528 bits (1360), Expect = e-149
Identities = 332/1044 (31%), Positives = 530/1044 (49%), Gaps = 71/1044 (6%)
Query: 599 ISLIAPLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVDS 658
I + L ++W +DSG S H+T E+ ++ K V KI GTG I +
Sbjct: 410 IPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTD 469
Query: 659 SPCIDNVLLVDGLTHNLLSISQLADKGYD-VIFNQKSCRAVSQIDGSVLFNSKRKNNIYK 717
+ + NVL + NLLS+S L V F C + +L + N+Y
Sbjct: 470 ALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYI 529
Query: 718 IRL-------SELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKF 770
+ L S ++V SV E +WH+RLGH S KI LS + + LP K
Sbjct: 530 LNLDKSLVDVSSFPGKSV--CSSVKNESEMWHKRLGHPSFAKIDTLSDVLM---LPKQKI 584
Query: 771 ASDAL-CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDD 829
D+ C C K +PFK+ N + + EL+HID +GP ++ RY + IVDD
Sbjct: 585 NKDSSHCHVCHLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDD 643
Query: 830 YSRWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGI 889
+SR TW+ L +K + VF +F+ V+ + ++ VRSD E KF LF GI
Sbjct: 644 FSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHEL---KFNELFAKEGI 700
Query: 890 AHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPI 949
D CP TP+QN VVERK++ L +AR ++ ++G+ +W + V TA ++ NR+ I
Sbjct: 701 KADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVI 760
Query: 950 LNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFY 1009
N+TPYE KP+ S FGC+CY + KFD ++ C+ LGY KG++
Sbjct: 761 NNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLL 820
Query: 1010 NTDAKTIEESIHVRF-DDKLDSDQSKLVEKFADLSINVSDKGKAPEE----VEPEEDEPE 1064
+ + ++ S HV F +D S + + D ++ +E V+ D P
Sbjct: 821 DIETYSVSISRHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPH 880
Query: 1065 --EEAG-----PSNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRP----------SE 1107
+E+ PS ++ ++ ++ + H ++ N + P T+++ P SE
Sbjct: 881 NHDESSSMIFVPSEPKSTRQRKLPS-HLQDFHCYN-NTPTTTKTSPYPLTNYISYSYLSE 938
Query: 1108 ETLLSLKGLVSLIEPKSIDEALQDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKW 1167
+ + + P+ EA DK W AM +E++ F + WS+ P +G KW
Sbjct: 939 PFGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKW 998
Query: 1168 VFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1227
+ K G + R+KARLVA+GY+QQEGID+ TF+PVA++ +++L+S + LH
Sbjct: 999 IITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLH 1058
Query: 1228 QMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1287
Q+D+ +A LNG + EE+Y+ PPG+ + + G + +P A
Sbjct: 1059 QLDISNALLNGDLEEEIYMKLPPGYSE-------------IQGQEVSPNA---------- 1095
Query: 1288 ENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGE 1347
+ D TLF K L+V +YVDDI+ S ++ E + + + F++ +GE
Sbjct: 1096 -----KCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGE 1150
Query: 1348 LKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQ 1407
K+FLGI++ + +G + Q KY +LL + + + PM P L K+ +
Sbjct: 1151 PKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDG 1210
Query: 1408 KLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYK 1467
K YR ++G L YL +RPDI F+V A++ S P + HL A+ +ILRYLKGT GL Y
Sbjct: 1211 KQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYG 1270
Query: 1468 KTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1527
+ + L G+ D+D+ R+ +G F+G++LVSW SK+Q +++S+AEAEY + +
Sbjct: 1271 ADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMS 1330
Query: 1528 ICSTQMLWMKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV 1586
+ + +++W+ + L ++I +YCDN AA+ ++ N + H R KHIE H +R+ +
Sbjct: 1331 VATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECI 1390
Query: 1587 QKGVLLLKFVDTDHQWADIFTKSL 1610
+ G+L FV TD+Q AD TK L
Sbjct: 1391 EAGILKTIFVRTDNQLADTLTKPL 1414
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 527 bits (1358), Expect = e-149
Identities = 340/1071 (31%), Positives = 562/1071 (51%), Gaps = 85/1071 (7%)
Query: 603 APLKHQSWYLDSGCSRHMTGEKRMFRELKLKPGGEVGFGGNEKGKIIGTGTICVD----S 658
A + +W LD+GCS HMT K + K G+V G + ++ G G + + S
Sbjct: 305 AEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGS 364
Query: 659 SPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI 718
+ + +V + ++ NL+S+ L DKG ++K + + D +VL K+++ +Y +
Sbjct: 365 TILLTDVRYIPEMSKNLISLGTLEDKGC-WFESKKGILTIFKNDLTVL-TGKKESTLYFL 422
Query: 719 RLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQL-SKLNLVRGLPNLKFASDALCE 777
+ + L A + +E +WH RLGH + + L SK +L + + + F +
Sbjct: 423 QGTTL-AGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNIM-ISFGA----- 475
Query: 778 ACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTE-SIGGKRYGMVIVDDYSRWTWV 836
AK+V T L+ +H DL+G SIG +Y + +DD++R TW+
Sbjct: 476 -------------AKHV--TKDKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWI 520
Query: 837 KFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAHDFSCP 896
F+ KDE+ + F + Q++N++ ++ + +D G EF N +F+S G+ +C
Sbjct: 521 YFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCA 580
Query: 897 RTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILNKTPYE 956
TPQQNGV ER NRT+ R ML E+G+ K FWAE +TA ++ N+ I P E
Sbjct: 581 YTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEE 640
Query: 957 LWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYNTDAKTI 1016
W P+ FG V Y+ + + +L+ ++ K + LGY D K F+ + + +
Sbjct: 641 KWTGHPPDYKILKKFGSVAYIHSDQGKLNP---RAKKGIFLGYPDGVKRFKVWLLEDRKC 697
Query: 1017 EESIHVRFDDKLDSDQSKLVEKFADLSIN-VSDKGKAPEEVE---------PEEDEPEEE 1066
S + F + + + +L N +S++ K EVE +DE + E
Sbjct: 698 VVSRDIVFQEN---------QMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSE 748
Query: 1067 AGPSNSQTLKKSRITAAHPKELILGNKDEP---------------VRTRSAFRPSEETLL 1111
G +++Q + +A+ K++ + D+ +R F +++L+
Sbjct: 749 GGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLV 808
Query: 1112 SLKGLVS----LIEPKSIDEALQDKE---WILAMEEELNQFSKNDVWSLVKKPESVHVIG 1164
++ + EP++ +EA++ E W A EE++ KND W ++ KPE VIG
Sbjct: 809 GFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIG 868
Query: 1165 TKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHN 1223
KW+F+ K G + R KARLVA+G+SQ+EGIDY E F+PV + +IR L+S V +
Sbjct: 869 CKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFD 928
Query: 1224 IVLHQMDVKSAFLNGYISEEVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLS 1283
+ L Q+DVK+AFL+G + E + + QP G+EDE + V LKKSLYGLKQ+PR W +R
Sbjct: 929 MELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFD 988
Query: 1284 SFLLENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQAEFEM 1342
SF++ + + R K + ++ + D I + +YVDD++ S N+ ++ E + EFEM
Sbjct: 989 SFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEM 1048
Query: 1343 SMMGELKYFLGIQVDQTPEGTYIH--QSKYTKELLKKFNMLESTVAKTPMHPTCIL---- 1396
+G + LG+++ + E + QS+Y +L+ F M +S V++TP+ L
Sbjct: 1049 KDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAAN 1108
Query: 1397 EKEDKSGKVCQKL--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRIL 1453
EK KL Y IGS++Y + SRPD+ + V + +RF S P + H AVK ++
Sbjct: 1109 EKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVM 1168
Query: 1454 RYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQST 1513
RY+KGT + L +KK ++++ GYCD+DYA D R+S +G G N +SW S Q
Sbjct: 1169 RYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRV 1228
Query: 1514 IALSTAEAEYISAAICSTQMLWMKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAK 1573
+ALST EAEY++ A + +W++ + + + + CD+ +AI+LSKN + H R K
Sbjct: 1229 VALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTK 1288
Query: 1574 HIEVKYHFIRDYVQKGVLLLKFVDTDHQWADIFTKSLAEDRFNFILKNLNM 1624
HI+V+YHFIR+ + G + + + T ADIFTK++ + LK L +
Sbjct: 1289 HIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRV 1339
>At4g03810 putative retrotransposon protein
Length = 964
Score = 493 bits (1268), Expect = e-139
Identities = 319/984 (32%), Positives = 507/984 (51%), Gaps = 70/984 (7%)
Query: 662 IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNN------- 714
+ N V + N++S+S L +G+ K C S + + S +N
Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCC---SFDRDDMFYGSAPLDNGLHVLNQ 61
Query: 715 ---IYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFA 771
IY IR + ++ ++ ++WH RLGH + + I +L L L + +
Sbjct: 62 SMPIYNIRTKKFKSNDLN-------PTFLWHCRLGHINEKHIQKLHSDGL---LNSFDYE 111
Query: 772 SDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYS 831
S CE+C GK TK PF + S L L+H D+ GP+ T + G +Y + DD+S
Sbjct: 112 SYETCESCLLGKMTKAPFTGHSE-RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFS 170
Query: 832 RWTWVKFLTRKDESHAVFSTFIAQVQNEKACRIVRVRSDLGGEFENDKFESLFDSYGIAH 891
R+ +V + K +S F F +VQN+ I +RSD GGE+ + F GI
Sbjct: 171 RYGYVYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVS 230
Query: 892 DFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFWAETVNTACYIQNRISVRPILN 951
+ P TPQ NGV ER+NRTL +M R+M+ T + FW + T+ ++ NR + +
Sbjct: 231 QLTPPGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-E 289
Query: 952 KTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSDRSKGFRFYN- 1010
KTPYE+W PN+S+ +GC Y + K KS KC +GY +KG+ FY+
Sbjct: 290 KTPYEIWTGKVPNLSFLKIWGCESYA--KRLITDKLGPKSDKCYFVGYPKETKGYYFYHP 347
Query: 1011 TDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPEEVEPEE-DEPEEEAGP 1069
TD K +V A L KG + +V EE EP+ +
Sbjct: 348 TDNKVF------------------VVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPT 389
Query: 1070 SNSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPS--EETLLSLKGL--VSLIEPKSI 1125
S ++ ++ E IL + RS P + ++ L + EP S
Sbjct: 390 SQ----EEHQLDLRRVVEPILVEPEVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSY 445
Query: 1126 DEAL---QDKEWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRN 1182
+EAL +W+ A + E+ S+N VW+LV P+ V I KW+F+ K++ G++
Sbjct: 446 EEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIY 505
Query: 1183 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISE 1242
KA LVA+GY Q GIDY ET++PVA L++IR+L++ + +++ + QMDVK+AFLNG + E
Sbjct: 506 KAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEE 565
Query: 1243 EVYVHQPPGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFC 1302
VY+ QP GF + V KL +S+YGLKQA R+W R + + E +F+R + + ++
Sbjct: 566 HVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYK 625
Query: 1303 KTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQV--DQTP 1360
KT + + +YVDDI+ + L + + + F M MGE Y LGI++ D+
Sbjct: 626 KTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLN 685
Query: 1361 EGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEK------EDKSGKVCQKLYRGMI 1414
+ + Q Y ++L +FNM +S PM L K D+ ++ + Y I
Sbjct: 686 KIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAI 745
Query: 1415 GSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILRYLKGTTNLGLMYKKTSEYK 1473
GS++Y + +RPD+ ++ + +R+QSDP E+H V+ I +YL+ T + L+Y + E
Sbjct: 746 GSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELV 805
Query: 1474 LSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICSTQM 1533
+SGY DA + D+ + +S SG L VSW S +QST+A ST EAEYI+A+ + ++
Sbjct: 806 VSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEV 865
Query: 1534 LWMKHQLEDYQILES---NIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYVQKGV 1590
+W++ + + ++ S I +YCDN AI+ +K P H ++KHI+ +YH IR+ + +G
Sbjct: 866 VWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGD 925
Query: 1591 LLLKFVDTDHQWADIFTKSLAEDR 1614
+ + V TD AD FTK L + +
Sbjct: 926 VKISRVSTDANVADHFTKPLPQPK 949
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.332 0.142 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,384,580
Number of Sequences: 26719
Number of extensions: 1384690
Number of successful extensions: 5692
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 4936
Number of HSP's gapped (non-prelim): 307
length of query: 1626
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1513
effective length of database: 8,299,349
effective search space: 12556915037
effective search space used: 12556915037
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0243.12