BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0240.16
(1549 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60170 putative protein 736 0.0
At3g61330 copia-type polyprotein 734 0.0
At1g48710 hypothetical protein 729 0.0
At2g15650 putative retroelement pol polyprotein 651 0.0
At1g32590 hypothetical protein, 5' partial 644 0.0
At3g59720 copia-type reverse transcriptase-like protein 632 0.0
At3g25450 hypothetical protein 611 e-174
At2g20460 putative retroelement pol polyprotein 610 e-174
At2g16000 putative retroelement pol polyprotein 593 e-169
At1g31210 putative reverse transcriptase 582 e-166
At1g70010 hypothetical protein 567 e-161
At2g05390 putative retroelement pol polyprotein 565 e-161
At1g37110 541 e-154
At2g07550 putative retroelement pol polyprotein 533 e-151
At2g13930 putative retroelement pol polyprotein 520 e-147
At1g26990 polyprotein, putative 516 e-146
At5g35820 copia-like retrotransposable element 511 e-145
At2g21460 putative retroelement pol polyprotein 506 e-143
At4g17450 retrotransposon like protein 498 e-141
At4g03810 putative retrotransposon protein 484 e-136
>At3g60170 putative protein
Length = 1339
Score = 736 bits (1900), Expect = 0.0
Identities = 403/1041 (38%), Positives = 604/1041 (57%), Gaps = 26/1041 (2%)
Query: 531 KDPRYGYLKQKLFLLQTSYAAQL---RHLSWYLDSGCSRHMTGTRSIFQKLTPLKSGGDV 587
K+ Y L+++ LL +Y Q R W+LDSGCS HMTG++ F +L V
Sbjct: 270 KNANYAELEEEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEE-GFNRTV 328
Query: 588 GFGGNQKGKIIGKGSIG---DGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQTGC 644
G + + ++GKGS+ +G T VI +V V L +NLLS+ Q+ ++G ++ C
Sbjct: 329 KLGNDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTC 388
Query: 645 KAVSQTDGSVLFSGKRKNDIYKIRSSELLSQKVKCLMS---VNDEQWIWHRRLGHASLRK 701
K + G+++ + N ++ + +S+ + CL + ++ E +WH R GH +
Sbjct: 389 KVYHPSKGAIMETNMSGNRMFFLLASKPQKNSL-CLQTEEVMDKENHLWHCRFGHLNQEG 447
Query: 702 ISQLSKLNLVRGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPV 761
+ L+ +V GLP LK + E +C C GK ++ K ++ L+L+H D+ GP+
Sbjct: 448 LKLLAHKKMVIGLPILKATKE-ICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPI 506
Query: 762 KTESIGGKKYELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHG 821
S GK+Y L +DD++R TWV FL K E F F V+KE + + +R+D G
Sbjct: 507 TPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRG 566
Query: 822 GEFENKAFEDLFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAE 881
GEF + F + S GIS + TPQQNGV ERKN T+ R+M+ E + K FW+E
Sbjct: 567 GEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSE 626
Query: 882 AINTACYIQNRISIRPILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKAL 941
A + +IQNR + TP E GR+P + YF FG ++ ++ K D K+
Sbjct: 627 ATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSK 686
Query: 942 KCYFLGYSERSKGFRIYNIIHQTVEESIQIRFDDKLGSEKSKLFERFADLSIDCSEANQP 1001
KC FLG SE SK +R+Y+ + + + S + FD+ + + +++++C + +
Sbjct: 687 KCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDE 746
Query: 1002 IKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKD----------APVRTR 1051
K+ E V P A AS + + + + + S P + K A T
Sbjct: 747 -KNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETG 805
Query: 1052 SMLKPSEETLLSLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGF 1111
+ E + L ++ +P D+A++DK W +AM+ E++ KN+ W L PKGF
Sbjct: 806 EGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGF 865
Query: 1112 HVIGTKWVFRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSV 1171
IG KWV++ KLNE GEV + KARLVA+GY+Q GIDYTE FAPVARL+ +R +++ S
Sbjct: 866 TPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISS 925
Query: 1172 NHNIILHQMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYE 1231
N + Q+DVKSAFL+G + EEVYV+QP GF E VYKL+K+LYGLKQAPRAWY
Sbjct: 926 QFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYS 985
Query: 1232 RLSSFLLQNEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEF 1291
R+ ++ L+ EF R ++TLF +T +ILIV +YVDD+IF ++ ++C EF K M EF
Sbjct: 986 RIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEF 1045
Query: 1292 EMSMMGELKYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEE 1351
EMS +G++K+FLGI++ Q G +I Q++Y E+L +F M + N K P+ P L K+E
Sbjct: 1046 EMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDE 1105
Query: 1352 VSSKVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTT 1411
KV + +++ ++GSL+YLT +RPD+++ V L +RF S+PR +H A KRIL+YLKGT
Sbjct: 1106 NGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTV 1165
Query: 1412 NLGLMY--RKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALST 1469
LG+ Y RK L F D+D+AGD +R+STSG + S + W+SK+Q +ALST
Sbjct: 1166 ELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALST 1225
Query: 1470 AEAEYVSAATCCTQTIWMKNHLEDYGLSLKKVP-IYCDNTAAISLSKNPILHSRAKHIEV 1528
EAEY++AA C Q +W++ LE G K I CDN++ I LSK+P+LH ++KHIEV
Sbjct: 1226 TEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEV 1285
Query: 1529 KYHYIRDHVQKGTLSLEYVDT 1549
++HY+RD V + LEY T
Sbjct: 1286 RFHYLRDLVNGDVVKLEYCPT 1306
>At3g61330 copia-type polyprotein
Length = 1352
Score = 734 bits (1896), Expect = 0.0
Identities = 408/1034 (39%), Positives = 583/1034 (55%), Gaps = 47/1034 (4%)
Query: 537 YLKQKL----FLLQTSYAA--QLRHLSWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFG 590
Y+++K+ LL SY Q + WYLDSG S HM G +S+F +L G+V G
Sbjct: 308 YVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDE-SVRGNVALG 366
Query: 591 GNQKGKIIGKGSI----GDGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKA 646
K ++ GKG+I +G I++V + + N+LS+ Q+ +KGYD+
Sbjct: 367 DESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSI 426
Query: 647 VSQTDGSVLFSGKRKNDIYKIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLS 706
Q + KN ++ + ++Q +K M +E W+WH R GH + + LS
Sbjct: 427 RDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 707 KLNLVRGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESI 766
+ +VRGLP + + ++ +CE C GK K F ++ +PLEL+H D+ GP+K +S+
Sbjct: 485 RKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL 543
Query: 767 GGKKYELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFEN 826
G Y L+ +DD+SR TWV FL+ K E +F F V+KE + T+RSD GGEF +
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
Query: 827 KAFEDLFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTA 886
K F GI + PR+PQQNGVVERKN T+ EMAR+M++ + K WAEA+ A
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 887 CYIQNRISIRPILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFL 946
Y+ NR + + KTP E GR+P +S+ FGS E+ K D K+ K F+
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFI 723
Query: 947 GYSERSKGFRIYN------IIHQTVEESIQIRFDDKLGSEKSKLFERFADLSIDCSEANQ 1000
GY SKG+++YN II + + + +D E F F +
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEE---------- 773
Query: 1001 PIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEET 1060
E E + + P + +P +S EE + + R RS+ + E T
Sbjct: 774 ---------DEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVT 821
Query: 1061 L----LSLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGT 1116
L+L + EP +A+E K W AM EE+ KND W L P G IG
Sbjct: 822 ENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGV 881
Query: 1117 KWVFRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNII 1176
KWV++ K N KGEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + +
Sbjct: 882 KWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWK 941
Query: 1177 LHQMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSF 1236
+HQMDVKSAFLNG + EEVY++QP G+ + V +LKK LYGLKQAPRAW R+ +
Sbjct: 942 IHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKY 1001
Query: 1237 LLQNEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMM 1296
+ +F++ ++ L+ + K DILI +YVDD+IF NPS+ +EF K M EFEM+ +
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDI 1061
Query: 1297 GELKYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKV 1356
G + Y+LGI++ Q +I Q+ Y E+LKKF + D N TPM L K+E V
Sbjct: 1062 GLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGV 1121
Query: 1357 CQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLM 1416
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRIL+Y+KGT N GL
Sbjct: 1122 DPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLH 1181
Query: 1417 YRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVS 1476
Y TS+Y L G+ D+D+ GD +RKSTSG ++G TW SK+Q + LST EAEYV+
Sbjct: 1182 YSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVA 1241
Query: 1477 AATCCTQTIWMKNHLEDYGLSLKK-VPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRD 1535
A +C IW++N L++ L ++ I+ DN +AI+L+KNP+ H R+KHI+ +YHYIR+
Sbjct: 1242 ATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRE 1301
Query: 1536 HVQKGTLSLEYVDT 1549
V K + LEYV T
Sbjct: 1302 CVSKKDVQLEYVKT 1315
>At1g48710 hypothetical protein
Length = 1352
Score = 729 bits (1882), Expect = 0.0
Identities = 406/1039 (39%), Positives = 582/1039 (55%), Gaps = 47/1039 (4%)
Query: 532 DPRYGYLKQKL----FLLQTSYAA--QLRHLSWYLDSGCSRHMTGTRSIFQKLTPLKSGG 585
+ + Y+++K+ LL SY Q + WYLDSG S HM G +S+F +L G
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDE-SVRG 361
Query: 586 DVGFGGNQKGKIIGKGSI----GDGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQ 641
+V G K ++ GKG+I +G I++V + + N+LS+ Q+ +KGYD+
Sbjct: 362 NVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKD 421
Query: 642 TGCKAVSQTDGSVLFSGKRKNDIYKIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRK 701
Q + KN ++ + ++Q +K M +E W+WH R GH +
Sbjct: 422 NNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGG 479
Query: 702 ISQLSKLNLVRGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPV 761
+ LS+ +VRGLP + + ++ +CE C GK K F ++ + LEL+H D+ GP+
Sbjct: 480 LELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPI 538
Query: 762 KTESIGGKKYELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHG 821
K +S+G Y L+ +DD+SR TWV FL+ K E +F F V+KE + T+RSD G
Sbjct: 539 KPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRG 598
Query: 822 GEFENKAFEDLFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAE 881
GEF +K F GI + PR+PQQNGV ERKN T+ EMAR+M++ + K WAE
Sbjct: 599 GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658
Query: 882 AINTACYIQNRISIRPILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKAL 941
A+ A Y+ NR + + KTP E GR+ +S+ FGS E+ K D K+
Sbjct: 659 AVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSE 718
Query: 942 KCYFLGYSERSKGFRIYN------IIHQTVEESIQIRFDDKLGSEKSKLFERFADLSIDC 995
K F+GY SKG+++YN II + + + +D E F F +
Sbjct: 719 KYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEE----- 773
Query: 996 SEANQPIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLK 1055
E E + + P + +P +S EE + + R RS+ +
Sbjct: 774 --------------DEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQE 816
Query: 1056 PSEETL----LSLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGF 1111
E T L+L + EP EA+E K W AM EE+ KND W L P G
Sbjct: 817 LYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGH 876
Query: 1112 HVIGTKWVFRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSV 1171
IG KWV++ K N KGEV R KARLVA+GY Q+ GIDY E FAPVARLE +RL+IS +
Sbjct: 877 KTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAA 936
Query: 1172 NHNIILHQMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYE 1231
+ +HQMDVKSAFLNG + EEVY++QP G+ + V +LKK+LYGLKQAPRAW
Sbjct: 937 QNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNT 996
Query: 1232 RLSSFLLQNEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEF 1291
R+ + + +F++ ++ L+ + K DILI +YVDD+IF NPS+ +EF K M EF
Sbjct: 997 RIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEF 1056
Query: 1292 EMSMMGELKYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEE 1351
EM+ +G + Y+LGI++ Q +I Q+ Y E+LKKF M D N TPM L K+E
Sbjct: 1057 EMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKE 1116
Query: 1352 VSSKVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTT 1411
V ++ ++GSL YLT +RPDIL++V + +R+ P TH A KRIL+Y+KGT
Sbjct: 1117 EGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTV 1176
Query: 1412 NLGLMYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAE 1471
N GL Y TS+Y L G+ D+D+ GD +RKSTSG ++G TW SK+Q + LST E
Sbjct: 1177 NFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCE 1236
Query: 1472 AEYVSAATCCTQTIWMKNHLEDYGLSLKK-VPIYCDNTAAISLSKNPILHSRAKHIEVKY 1530
AEYV+A +C IW++N L++ L ++ I+ DN +AI+L+KNP+ H R+KHI+ +Y
Sbjct: 1237 AEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRY 1296
Query: 1531 HYIRDHVQKGTLSLEYVDT 1549
HYIR+ V K + LEYV T
Sbjct: 1297 HYIRECVSKKDVQLEYVKT 1315
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 651 bits (1679), Expect = 0.0
Identities = 373/1030 (36%), Positives = 568/1030 (54%), Gaps = 51/1030 (4%)
Query: 542 LFLLQTSYAAQLRHLSWYLDSGCSRHMTGTRSIFQKLT-----PLK-SGGDVGFGGNQKG 595
LF + LR W +DSGC+ HMT F + P++ GD+
Sbjct: 310 LFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTA---- 365
Query: 596 KIIGKGSIG----DGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTD 651
GKG I GK +I +V LV GL NLLS+ QI GY V F C + +
Sbjct: 366 ---GKGDITVMTRHGKR-IIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDAN 420
Query: 652 GSVLFSGKRKNDIYKIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLV 711
G + + + + +KI+ S + + + + + WH+RLGH S +++ Q+ LV
Sbjct: 421 GKEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEET---WHKRLGHVSNKRLQQMQDKELV 477
Query: 712 RGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKY 771
GLP K + E C+AC GK ++K F ++ T LE++H D+ GP++ +SI G +Y
Sbjct: 478 NGLPRFKVTKET-CKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRY 536
Query: 772 ELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFED 831
++ +DDY+ WV FL+ K ET F F V+K+ S+ T+R E
Sbjct: 537 YVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP----------MEV 586
Query: 832 LFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQN 891
+GI+ + P +PQQNG ERKN +L EMAR+M+ E + WAEA+ T+ Y+QN
Sbjct: 587 FCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQN 646
Query: 892 RISIRPILEK-TPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSE 950
R+ + I + TP E G +P++S+ FGS C++ ++ K D+KA +GYS
Sbjct: 647 RLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSN 706
Query: 951 RSKGFRIYNIIHQTVEESIQIRF--DDKLGSEKSKLFERFADLSI-DCSEA-------NQ 1000
++KG+R++ + + VE S + F D K +K + ++ +SI D E+ +
Sbjct: 707 QTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSH 766
Query: 1001 PIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEET 1060
+ +D A E S +++R + P++ + ++ ++E
Sbjct: 767 DLSQIDDHANNGEGETSSHVLSQVNDQEERETSESPKKY---KSMKEILEKAPRMENDEA 823
Query: 1061 LLSLKG-FVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWV 1119
++ V+ EP++ DEA DK W +AM EE+ KN W L+ KP+ +VI KW+
Sbjct: 824 AQGIEACLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWI 883
Query: 1120 FRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQ 1179
++ K + G ++KARLVA+G+SQ+ GIDY ETFAPV+R + IR L++++ L+Q
Sbjct: 884 YKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQ 943
Query: 1180 MDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQ 1239
MDVKSAFLNG + EEVYV QPPGF E V +L K+LYGLKQAPRAWYER+ S+ +Q
Sbjct: 944 MDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQ 1003
Query: 1240 NEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGEL 1299
N F R D L+ + D+LIV +YVDD+I N L F K M+ EFEM+ +G L
Sbjct: 1004 NGFARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLL 1063
Query: 1300 KYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSK--VC 1357
YFLG++++Q ++ Q+KY +L+ KF M + TP+ P + E K
Sbjct: 1064 NYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFAD 1123
Query: 1358 QKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMY 1417
YR ++G LLYL ASRPD++++ +R+ S P H KR+L+Y+KGT+N G+++
Sbjct: 1124 PTKYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLF 1183
Query: 1418 RKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSA 1477
L G+ D+D+ G ++KST+G LG + W S +Q T+A STAEAEY++
Sbjct: 1184 TSKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAV 1243
Query: 1478 ATCCTQTIWMKNHLEDYGLSLKK-VPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDH 1536
Q IW++ ED+GL K+ +PI CDN +AI++ +NP+ H R KHIE+KYH++R+
Sbjct: 1244 CAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREA 1303
Query: 1537 VQKGTLSLEY 1546
KG + LEY
Sbjct: 1304 EHKGLIQLEY 1313
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 644 bits (1662), Expect = 0.0
Identities = 361/1010 (35%), Positives = 565/1010 (55%), Gaps = 53/1010 (5%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSG--GDVGFGGNQKGKIIGKGSIG---DGKTPVIN 612
W+LDSGCS HM GTR F +L SG +V G +++ + GKG + DG+ VI+
Sbjct: 258 WFLDSGCSNHMCGTREWFLELD---SGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQVIS 314
Query: 613 DVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGS-VLFSGKRKNDIYKIRSSE 671
DV V GL +NL S+ Q+ KG I C+ +T+ V+ S KN ++ + ++
Sbjct: 315 DVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAV 374
Query: 672 LLS---QKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSE-ALCEA 727
S ++ +CL + +WH+R GH + + + L++ +V+GLP E A+C+
Sbjct: 375 KKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDI 434
Query: 728 CQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKF 787
C KGK ++ ++ +T+ L+L+H D+ GP+ S GK+Y L +DD+SR W
Sbjct: 435 CLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYL 494
Query: 788 LRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRT 847
L K ET F F +V++E ++ +RSD GGE+ ++ F++ GI + T
Sbjct: 495 LSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYT 554
Query: 848 PQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELC 907
PQQNGV ERKN ++ M R M+ E S+ + FW EA+ A YI NR + + + TP E
Sbjct: 555 PQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKW 614
Query: 908 KGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEE 967
+P + + FGS + L ++ K D K++KC G S+ SK +R+Y+ +
Sbjct: 615 SSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILI 674
Query: 968 SIQIRFDDKLGSE--KSKLFERFADLSIDCSEANQ--PIKSPEDVAPEAEASEDFPTTSD 1023
S ++FD++ G E L E + D A + P + + E E+ T ++
Sbjct: 675 SRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVAE 734
Query: 1024 PLQKKKRIVAS---HPEELIIGNKDAPVRTRSMLKPSEETLLSLKGFVSLIEPKSVDEAL 1080
+ + V + + + KD V +L +E L F+ +P +EA
Sbjct: 735 TVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFEEAA 794
Query: 1081 EDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEVTRNKARLVAQ 1140
+ + W +AM+ E+ +N+ W L+ P+ VIG KW+F+ K NEKGEV + KARLVA+
Sbjct: 795 QLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAK 854
Query: 1141 GYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVKQP 1200
GY Q+ G+D+ E FAPVA+ + IRL++ + + Q+DVKSAFL+G + E+V+V+QP
Sbjct: 855 GYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQP 914
Query: 1201 PGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFCRTYKNDI 1260
GFE + VYKLKK+LYGLKQAPRAWY R+ F + F + ++TLF + ++D
Sbjct: 915 KGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDF 974
Query: 1261 LIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQRPGVTYIHQKK 1320
L+V +YVDD+I+ ++ + + F M EF M+ +G++KYFLG+++ Q +I+Q+K
Sbjct: 975 LVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRK 1034
Query: 1321 YTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLLYLTASRPDILF 1380
Y E++KK+ M CN K P+ P QKL + G++
Sbjct: 1035 YAAEIIKKYGMEGCNSVKNPIVPG-------------QKLTKA--GAV------------ 1067
Query: 1381 SVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDADFAGDRVER 1440
+R+ P E HL AVKRIL+Y++GT +LG+ Y + L GF D+D+AGD +R
Sbjct: 1068 -----SRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDR 1122
Query: 1441 KSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLEDYGLSLK- 1499
KSTSG LG + W+SK+Q + LST EAE+VSA+ Q +W++N LE+ G +
Sbjct: 1123 KSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEG 1182
Query: 1500 KVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
++CDN++ I LSKNP+LH R+KHI V+YH++R+ V++GT+ L+Y T
Sbjct: 1183 GTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTT 1232
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 632 bits (1630), Expect = 0.0
Identities = 378/1034 (36%), Positives = 537/1034 (51%), Gaps = 127/1034 (12%)
Query: 537 YLKQKL----FLLQTSYAA--QLRHLSWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFG 590
Y+++K+ LL SY Q + WYLDSG S HM G +S+F +L G+V G
Sbjct: 308 YVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDE-SVRGNVALG 366
Query: 591 GNQKGKIIGKGSI----GDGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKA 646
K ++ GKG+I +G I++V + + N+LS+ Q+ +KGYD+
Sbjct: 367 DESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSI 426
Query: 647 VSQTDGSVLFSGKRKNDIYKIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLS 706
+ + KN ++ + ++Q +K M +E W+WH R GH + + LS
Sbjct: 427 RDKESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 707 KLNLVRGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESI 766
+ +VRGLP + + ++ +CE C G K F ++ +PLEL+H D+ GP+K +S+
Sbjct: 485 RKEMVRGLPCINHPNQ-VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL 543
Query: 767 GGKKYELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFEN 826
G Y L+ +DD+SR TWV FL+ K E +F F V+KE + T+RSD GGEF +
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTS 603
Query: 827 KAFEDLFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTA 886
K F GI + PR+PQQNGV ERKN T+ EMAR+M++ + K WAEA+ A
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 887 CYIQNRISIRPILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFL 946
Y+ NR + + KTP E GR+P +S+ FGS E+ K D K+ K F+
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFI 723
Query: 947 GYSERSKGFRIYN------IIHQTVEESIQIRFDDKLGSEKSKLFERFADLSIDCSEANQ 1000
GY SKG+++YN II + + + +D E F F
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHF------------ 771
Query: 1001 PIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEET 1060
E+ PE E P + +P +S EE + + R RS+ + E T
Sbjct: 772 -----EEDKPEPTREE--PPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVT 821
Query: 1061 L----LSLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGT 1116
L+L + EP EA+E K W AM EE+ KND W L P G IG
Sbjct: 822 ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGV 881
Query: 1117 KWVFRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNII 1176
KWV++ K N KGEV R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + +
Sbjct: 882 KWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWK 941
Query: 1177 LHQMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSF 1236
+HQMDVKSAFLNG + EEVY++QP G+ + V +LKK LYGLKQAPRAW R+ +
Sbjct: 942 IHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKY 1001
Query: 1237 LLQNEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMM 1296
+ +F++ ++ L+ + K DILI +YVDD+IF NPS+ +EF K M EFEM+ +
Sbjct: 1002 FKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDI 1061
Query: 1297 GELKYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKV 1356
G + Y+LGI++ Q +I Q+ Y E+LKKF M D N S
Sbjct: 1062 GLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPS------------------- 1102
Query: 1357 CQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLM 1416
++GSL YLT +RPDIL++V + +R+ P TH A KRIL+Y+KGT N GL
Sbjct: 1103 -------LVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLH 1155
Query: 1417 YRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVS 1476
Y TS+Y L CH
Sbjct: 1156 YSTTSDYKLV-------------------VCH---------------------------- 1168
Query: 1477 AATCCTQTIWMKNHLEDYGLSLKK-VPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRD 1535
IW++N L++ L ++ I+ DN +AI+L+KNP+ H R+KHI+ +YHYIR+
Sbjct: 1169 -------AIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRE 1221
Query: 1536 HVQKGTLSLEYVDT 1549
V K + LEYV T
Sbjct: 1222 CVSKKDVQLEYVKT 1235
>At3g25450 hypothetical protein
Length = 1343
Score = 611 bits (1575), Expect = e-174
Identities = 351/1018 (34%), Positives = 560/1018 (54%), Gaps = 40/1018 (3%)
Query: 557 SWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSIG----DGKTPVIN 612
+WYLD+G S HMTG R+ F KL + +G V FG + I GKGSI G+ ++
Sbjct: 291 AWYLDNGASNHMTGNRAWFCKLDEMITG-KVRFGDDSCINIKGKGSIPFISKGGERKILF 349
Query: 613 DVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKR-KNDIYKIRSSE 671
DV + L N+LS+ Q + G D+ + + +G++L +R +N +YK+
Sbjct: 350 DVYYIPDLKSNILSLGQATESGCDIRMREDYL-TLHDREGNLLIKAQRSRNRLYKV---S 405
Query: 672 LLSQKVKCL-MSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQK 730
L + KCL ++ +E IWH RLGH S I + K LV G+ + C +C
Sbjct: 406 LEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLF 465
Query: 731 GKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLRH 790
GK + F + LEL+H DL GP+ + K+Y V++DD+SR+ W L+
Sbjct: 466 GKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKE 525
Query: 791 KDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQ 850
K E F F V++E + + T R+D GGEF + F++ +GI+ + + P TPQQ
Sbjct: 526 KSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQ 585
Query: 851 NGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGR 910
NGVVER+N TL M R++++ +M + W EA+ + Y+ NR+ R + +TPYE+ K +
Sbjct: 586 NGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHK 645
Query: 911 QPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQ 970
+P++ + FG + L K D ++ +LG SK +R+ + + + S
Sbjct: 646 KPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRD 705
Query: 971 IRFDDKLG----SEKSKLFERFADLSIDCSEANQPIKSPEDVAPEAEASEDFPTTSDPLQ 1026
+ FD+ S+ + +I SE + D++ E E +E+ +
Sbjct: 706 VVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGED-- 763
Query: 1027 KKKRIVASHPEELIIGNKDA-PVRT--RSMLKPS-------------EETLLSLKGFVSL 1070
+ I + EE ++ PVR R +++P+ E LL++
Sbjct: 764 -ENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND---- 818
Query: 1071 IEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEV 1130
EP EA + K W A +EE+ KN W+L+ P G IG KWVF+ K N G +
Sbjct: 819 -EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSI 877
Query: 1131 TRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGY 1190
+ KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+I+ + ++ +H +DVK+AFL+G
Sbjct: 878 NKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGE 937
Query: 1191 ISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNT 1250
+ E+VYV QP GF + + E VYKL K+LYGL+QAPRAW +L+ L + +F + + +
Sbjct: 938 LREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPS 997
Query: 1251 LFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQR 1310
L+ + +IL+V +YVDD++ +N + F K M +FEMS +G+L Y+LGI++ Q
Sbjct: 998 LYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQS 1057
Query: 1311 PGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLLY 1370
+ Q++Y ++L++ MS CN TPM + L K + ++ + YR IG L Y
Sbjct: 1058 KDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLRY 1117
Query: 1371 LTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCD 1430
L +RPD+ ++V + +R+ +PRE+H A+K+IL+YL+GTT+ GL ++K L G+ D
Sbjct: 1118 LLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYSD 1177
Query: 1431 ADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNH 1490
+ D + KST G +L +TW S++Q + LS+ EAE+++A Q IW++
Sbjct: 1178 SSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQEL 1237
Query: 1491 L-EDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYV 1547
L E G +KV I DN +AI+L+KNP+ H R+KHI +YH+IR+ V+ G + +E+V
Sbjct: 1238 LAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHV 1295
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 610 bits (1573), Expect = e-174
Identities = 353/1008 (35%), Positives = 556/1008 (55%), Gaps = 36/1008 (3%)
Query: 557 SWYLDSGCSRHMTGTRSIFQKL-TPLKSGGDVGFGGNQKGKIIGKGSIGDGKTPVINDVL 615
+W +DSG + H++ R +FQ L T + S ++ G N + I G G++ K ++ +VL
Sbjct: 441 TWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVR--ISGVGTVLINKDIILQNVL 498
Query: 616 LVEGLFHNLLSISQIA-DKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELLS 674
+ NL+SIS + D G VIF+ + C+ T G L GKR ++Y + ++ +
Sbjct: 499 FIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLY-VLDTQSPA 557
Query: 675 QKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQKGKFT 734
V ++ V+ +WH+RLGH S ++ LS+ V G K A C C K
Sbjct: 558 ISVNAVVDVS----VWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLAKQK 610
Query: 735 KKPF-KAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLRHKDE 793
K F A N+ ++T ELLHID++GP E++ G KY L IVDD+SR TW+ L+ K +
Sbjct: 611 KLSFPSANNICNST--FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSD 668
Query: 794 THTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQNGV 853
T+F FI V+ ++ + V +VRSD+ E AF + + ++GI SCP TP+QN V
Sbjct: 669 VLTVFPAFIDLVENQYDTRVKSVRSDNAKEL---AFTEFYKAKGIVSFHSCPETPEQNSV 725
Query: 854 VERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGRQPD 913
VERK+ + +AR +M +S+M+ +W + + TA ++ NR + KTP+E+ G+ PD
Sbjct: 726 VERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPD 785
Query: 914 ISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQIRF 973
S FG C+ + +Q KF ++ C FLGY KG+++ ++ V S + F
Sbjct: 786 YSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEF 845
Query: 974 DDKLGSEKSKLFERFADLSIDCSEANQPIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVA 1033
++L S ++ A + D P+ S + + + P+T Q KR +
Sbjct: 846 HEELFPLASS--QQSATTASDVFTPMDPLSSGNSITSHLPSPQISPST----QISKRRIT 899
Query: 1034 SHPEEL-----IIGNKDAPVRTRSMLKPSEET---LLSLKGFVSLIEPKSVDEALEDKGW 1085
P L NKD S L S+ + +L + + P+S EA + K W
Sbjct: 900 KFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEW 959
Query: 1086 IQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEVTRNKARLVAQGYSQQ 1145
A+ +E+ + D W + P G +G KWVF K + G + R KAR+VA+GY+Q+
Sbjct: 960 CGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQK 1019
Query: 1146 EGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVKQPPGFED 1205
EG+DYTETF+PVA++ ++LL+ S + L+Q+D+ +AFLNG + E +Y+K P G+ D
Sbjct: 1020 EGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYAD 1079
Query: 1206 NKH----PEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFCRTYKNDIL 1261
K P V +LKKS+YGLKQA R W+ + S+ LL F + GD+TLF R ++ +
Sbjct: 1080 IKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFI 1139
Query: 1262 IVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQRPGVTYIHQKKY 1321
++ +YVDDI+ S + ++ ++A F++ +G LKYFLG+++ + + Q+KY
Sbjct: 1140 VLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKY 1199
Query: 1322 TLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLLYLTASRPDILFS 1381
LELL +M DC S PM P L K + +++YR ++G L+YLT +RPDI F+
Sbjct: 1200 ALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFA 1259
Query: 1382 VHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDADFAGDRVERK 1441
V+ +F S PR HL AV ++L+Y+KGT GL Y + TL G+ DAD+ R+
Sbjct: 1260 VNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRR 1319
Query: 1442 STSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLEDYGLSLKKV 1501
ST+G F+GS+L++W SK+Q T++ S+AEAEY + A + W+ L +
Sbjct: 1320 STTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVP 1379
Query: 1502 PIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
+Y D+TAA+ ++ NP+ H R KHIE+ H +R+ + G L L +V T
Sbjct: 1380 ILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKT 1427
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 593 bits (1529), Expect = e-169
Identities = 352/1016 (34%), Positives = 549/1016 (53%), Gaps = 40/1016 (3%)
Query: 553 LRHLSWYLDSGCSRHMTGTRSIFQKL-TPLKSGGDVGFGGNQKGKIIGKGSIGDGKTPVI 611
L +W +DSG + H++ RS+F L T + S ++ G K I G G++ ++
Sbjct: 426 LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVK--ISGVGTLKLNDDILL 483
Query: 612 NDVLLVEGLFHNLLSISQIADK-GYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSS 670
+VL + NL+SIS + D G VIF++ C+ G +L G+R ++Y +
Sbjct: 484 KNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVG 543
Query: 671 ELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQK 730
+ S V ++ ++ +WHRRLGHASL+++ +S G K C C
Sbjct: 544 DQ-SISVNAVVDIS----MWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHL 595
Query: 731 GKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLRH 790
K K F N V +LLHID++GP E++ G KY L IVDD+SR TW+ L+
Sbjct: 596 AKQRKLSFPTSNKVCK-EIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKT 654
Query: 791 KDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQ 850
K E T+F FI QV+ +++ V VRSD+ E + F + +GI SCP TP+Q
Sbjct: 655 KSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQ 711
Query: 851 NGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGR 910
N VVERK+ + +AR +M +S + W + + TA ++ NR + ++ KTPYE+ G
Sbjct: 712 NSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGT 771
Query: 911 QPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQ 970
P FG C+ + +Q KF ++ C FLGY KG+++ ++ TV S
Sbjct: 772 APVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRN 831
Query: 971 IRFDDKL-------GSEKS-KLFERFADLS--IDCSEANQPIKSPEDVAPEAEASEDFPT 1020
++F +++ GSE S KLF +S I + P P ++ D P
Sbjct: 832 VQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQIS-------DLPP 884
Query: 1021 TSDPLQKKK---RIVASHPEELIIGNKDAPVRTRSMLKPSEETLLSLKGFVSLIEPKSVD 1077
+ +K + H + +K T S K S + + + P +
Sbjct: 885 QISSQRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYA 944
Query: 1078 EALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEVTRNKARL 1137
EA + K W +A+ E+ K + W + PKG +G KWVF K G + R KARL
Sbjct: 945 EAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARL 1004
Query: 1138 VAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYV 1197
VA+GY+Q+EG+DYT+TF+PVA++ I+LL+ S + L Q+DV +AFLNG + EE+++
Sbjct: 1005 VAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFM 1064
Query: 1198 KQPPGFEDNKH---PEHVY-KLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFC 1253
K P G+ + K P +V +LK+S+YGLKQA R W+++ SS LL F + GD+TLF
Sbjct: 1065 KIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFL 1124
Query: 1254 RTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQRPGV 1313
+ Y + +IV +YVDDI+ S + + + ++ + F++ +G+LKYFLG+++ +
Sbjct: 1125 KMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAG 1184
Query: 1314 TYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLLYLTA 1373
I Q+KY LELL+ M C PM P + K++ + YR ++G L+YLT
Sbjct: 1185 ISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTI 1244
Query: 1374 SRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDADF 1433
+RPDI F+V+ +F S PR THLTA R+L+Y+KGT GL Y +S+ TL GF D+D+
Sbjct: 1245 TRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDW 1304
Query: 1434 AGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLED 1493
A + R+ST+ F+G +L++W SK+Q+T++ S+AEAEY + A + +W+ L
Sbjct: 1305 ASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVS 1364
Query: 1494 YGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
S +Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L L +V T
Sbjct: 1365 LQASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRT 1420
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 582 bits (1499), Expect = e-166
Identities = 338/1026 (32%), Positives = 551/1026 (52%), Gaps = 50/1026 (4%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSI----GDGKTPVIND 613
W+ DS + H+T + + Q T + V G I GS +GK P +N+
Sbjct: 322 WHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIP-LNE 380
Query: 614 VLLVEGLFHNLLSISQIADK-GYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSEL 672
VL+V + +LLS+S++ D V F+ + V+ +G R+N +Y + + E
Sbjct: 381 VLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQEF 440
Query: 673 LSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQKGK 732
++ + +E +WH RLGHA+ + + L ++ K + +CE CQ GK
Sbjct: 441 VALYSNRQCAATEE--VWHHRLGHANSKALQHLQNSKAIQ---INKSRTSPVCEPCQMGK 495
Query: 733 FTKKPFKAKNVVSTTR---PLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLR 789
++ PF ++S +R PL+ +H DL+GP S G KY + VDDYSR++W L
Sbjct: 496 SSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLH 551
Query: 790 HKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQ 849
+K E ++F +F V+ + + + +SD GGEF + + + GI H SCP TPQ
Sbjct: 552 NKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQ 611
Query: 850 QNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKG 909
QNG+ ERK+ L E+ +M+ S + FW E+ TA YI NR+ + +PYE G
Sbjct: 612 QNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALFG 671
Query: 910 RQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIY----------- 958
+PD S FGS C+ KFD ++L+C FLGY+ + KG+R +
Sbjct: 672 EKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISR 731
Query: 959 NIIHQTVEESIQIRFDDKLGSEKSKLFE-----RFADLSIDCSEANQPIKSPEDVAPEA- 1012
N+I E + ++ + + L + + +++S+ + Q P D+ A
Sbjct: 732 NVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPV-QLFSKPIDLNTYAG 790
Query: 1013 -----EASEDFPTTS-----DPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEETLL 1062
+ ++ PT++ + + +A++ E++I + + KP+ L
Sbjct: 791 SQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRSKAGIQKPNTRYAL 850
Query: 1063 SLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRN 1122
+ ++ EPK++ A++ GW +A+ EE+++ W+L+P +++ +KWVF+
Sbjct: 851 -ITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKT 909
Query: 1123 KLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDV 1182
KL+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL++ S + + Q+DV
Sbjct: 910 KLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDV 969
Query: 1183 KSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEF 1242
+AFL+G + E V++ QP GF D + P HV +L K++YGLKQAPRAW++ S+FLL F
Sbjct: 970 SNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGF 1029
Query: 1243 VRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYF 1302
V K D +LF IL + +YVDDI+ ++ SL ++ + ++ F M +G +YF
Sbjct: 1030 VCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYF 1089
Query: 1303 LGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYR 1362
LGIQI+ ++HQ Y ++L++ MSDCN TP+ E+ ++ +R
Sbjct: 1090 LGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQLDNLNSELFAE--PTYFR 1147
Query: 1363 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSE 1422
+ G L YLT +RPDI F+V+ + P + +KRIL+Y+KGT +GL ++ S
Sbjct: 1148 SLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNST 1207
Query: 1423 YTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCT 1482
TLS + D+D AG + R+ST+G C LGSNL++WS+KRQ T++ S+ EAEY +
Sbjct: 1208 LTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAR 1267
Query: 1483 QTIWMKNHLEDYGL-SLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGT 1541
+ W+ L D G+ +YCDN +A+ LS NP LH+R+KH + YHYIR+ V G
Sbjct: 1268 EITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGL 1327
Query: 1542 LSLEYV 1547
+ +++
Sbjct: 1328 IETQHI 1333
>At1g70010 hypothetical protein
Length = 1315
Score = 567 bits (1462), Expect = e-161
Identities = 334/975 (34%), Positives = 524/975 (53%), Gaps = 33/975 (3%)
Query: 601 GSIGDGKTPVINDVLLVEGLFHNLLSISQIADK-GYDVIFNQTGCKAVSQTDGSVLFSGK 659
GS+ G+ ++NDVL + NLLS+S + G + F++T C T ++ GK
Sbjct: 315 GSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGK 374
Query: 660 RKNDIYKIRSSELLSQKVKCLMSVND--EQWIWHRRLGHASLRKISQLSKLNLVRGLPHL 717
+ ++Y + L ++V +WH+RLGH S++K+ +S L P
Sbjct: 375 QVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSL---LSFPKQ 431
Query: 718 KYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVD 777
K +++ C C K PF + N S+ RP +L+HID +GP ++ G +Y L IVD
Sbjct: 432 KNNTDFHCRVCHISKQKHLPFVSHNNKSS-RPFDLIHIDTWGPFSVQTHDGYRYFLTIVD 490
Query: 778 DYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQG 837
DYSR TWV LR+K + T+ F+T V+ +F++++ VRSD+ E F ++S+G
Sbjct: 491 DYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKG 547
Query: 838 ISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRP 897
I SCP TPQQN VVERK+ + +AR++ +S + +W + I TA Y+ NR+
Sbjct: 548 IVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPI 607
Query: 898 ILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRI 957
+ +K P+E+ P + FG C+ + + KF +A C F+GY KG+++
Sbjct: 608 LEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKL 667
Query: 958 YNIIHQTVEESIQIRFDDKL----GSEKSKLFERF-ADLS------------IDCSEANQ 1000
++ ++ S + F ++L GS+ S+ + F DL+ ++ S+++
Sbjct: 668 LDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSS 727
Query: 1001 PIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNKDAPVRT-RSMLKPSEE 1059
++ P E TS KK + + ++ + +R S + ++
Sbjct: 728 SVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDP 787
Query: 1060 TLLSLKGFVSLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWV 1119
L L EP + EA + + W AM E D W + P IG +W+
Sbjct: 788 YLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWI 847
Query: 1120 FRNKLNEKGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQ 1179
F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA+L +++LL+ + + L Q
Sbjct: 848 FKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQ 907
Query: 1180 MDVKSAFLNGYISEEVYVKQPPGFE----DNKHPEHVYKLKKSLYGLKQAPRAWYERLSS 1235
+D+ +AFLNG + EE+Y++ P G+ D+ P V +LKKSLYGLKQA R WY + SS
Sbjct: 908 LDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSS 967
Query: 1236 FLLQNEFVRGKGDNTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSM 1295
LL F++ D+T F + L V +Y+DDII S N + M++ F++
Sbjct: 968 TLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRD 1027
Query: 1296 MGELKYFLGIQIDQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSK 1355
+GELKYFLG++I + +I Q+KY L+LL + C S PM P+ + +
Sbjct: 1028 LGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDF 1087
Query: 1356 VCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGL 1415
V YR +IG L+YL +RPDI F+V+ A+F PR+ HL AV +IL+Y+KGT GL
Sbjct: 1088 VEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGL 1147
Query: 1416 MYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYV 1475
Y TSE L + +AD+ R R+STSG C FLG +L+ W S++Q+ ++ S+AEAEY
Sbjct: 1148 FYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYR 1207
Query: 1476 SAATCCTQTIWMKNHLEDYGLSLKK-VPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIR 1534
S + + +W+ N L++ + L K ++CDN AAI ++ N + H R KHIE H +R
Sbjct: 1208 SLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVR 1267
Query: 1535 DHVQKGTLSLEYVDT 1549
+ + KG L +++T
Sbjct: 1268 ERLLKGLFELYHINT 1282
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 565 bits (1457), Expect = e-161
Identities = 339/1020 (33%), Positives = 547/1020 (53%), Gaps = 71/1020 (6%)
Query: 557 SWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSI----GDGKTPVIN 612
SWYLD+G S HMTG F KL + +G V FG + + I GKGSI G +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITG-KVRFGDDSRIDIKGKGSIVLITKGGIRKTLT 337
Query: 613 DVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSEL 672
DV + L N++S+ Q + G DV + +L + + +N +YK+ +L
Sbjct: 338 DVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKV---DL 394
Query: 673 LSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQKGK 732
+ VKCL + + + + LV G+ ++ E C +C GK
Sbjct: 395 NVENVKCLQL------------------EAATMVRKELVIGISNIPKEKET-CGSCLLGK 435
Query: 733 FTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLRHKD 792
++PF ++ LEL+H DL GP+ + K+Y LV++DD++R+ W L+ K
Sbjct: 436 QARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKS 495
Query: 793 ETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQNG 852
E F +F T+V++E + T R+D GGEF ++ F+D +GI+ + + P TPQQNG
Sbjct: 496 EAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNG 555
Query: 853 VVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGRQP 912
VVER+N TL M R++++ M + W EA+ + YI NR+ R + +TPYE+ K R+P
Sbjct: 556 VVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKP 615
Query: 913 DISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQIR 972
++ + FG + L K D ++ +LG SK +R+ + ++ +
Sbjct: 616 NVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKII------ 669
Query: 973 FDDKLGSEKSKLFERFADLSIDCSE-ANQPIKSPEDVAPEAEASEDFPTTSDPLQKKKRI 1031
K + S+ + S+ E N I+ +D+ E E S+ +++
Sbjct: 670 ---KWNNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEE-----SENSHEEEGE 721
Query: 1032 VASHPEELIIGNKDAPVR----------TRSMLKPS-------------EETLLSLKGFV 1068
+ +E I + P TR + KP+ E+ LL++
Sbjct: 722 NEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAIND-- 779
Query: 1069 SLIEPKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKG 1128
EP EA + K W A +EE+ KN W+L+ P VIG KWVF+ K N G
Sbjct: 780 ---EPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDG 836
Query: 1129 EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLN 1188
+ + KARLVA+GY Q+ GIDY E FA VAR+E IR++I+ + ++ +H +DVK+AFL+
Sbjct: 837 SINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLH 896
Query: 1189 GYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGD 1248
G + E+VYV QP GF + + VYKL K+LYGLKQAPRAW +L+ L + FV+ +
Sbjct: 897 GELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKE 956
Query: 1249 NTLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQID 1308
+++ R + +LIV IYVDD++ ++ L F K M +FEMS +G+L Y+LGI++
Sbjct: 957 PSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVL 1016
Query: 1309 QRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSL 1368
R + Q++Y ++++++ MS+CN PM L K + + ++ YR MIG L
Sbjct: 1017 HRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCL 1076
Query: 1369 LYLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGF 1428
Y+ +RPD+ + V + +R+ PRE+H A+K++L+YLKGT + GL ++ + L G+
Sbjct: 1077 RYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGY 1136
Query: 1429 CDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMK 1488
D+ + D + KST+G +L +TW S++Q +ALS+ EAE+++A Q IW++
Sbjct: 1137 SDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQ 1196
Query: 1489 N-HLEDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYV 1547
+ E G + +KV I DN +AI+L+KN + H R+KHI +YH+IR+ V+ + +++V
Sbjct: 1197 DLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHV 1256
>At1g37110
Length = 1356
Score = 541 bits (1395), Expect = e-154
Identities = 346/1058 (32%), Positives = 550/1058 (51%), Gaps = 60/1058 (5%)
Query: 536 GYLKQKLFLLQT-SYAAQLRHLSWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQK 594
G + +KL + S Q+ W LDSGC+ HMT R F K + G +
Sbjct: 285 GVITEKLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQE-KGNTTILLGDDHS 343
Query: 595 GKIIGKGSIG----DGKTPVINDVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQ- 649
+ G+G+I G ++ +V V L NL+S + GY ++ G V
Sbjct: 344 VESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYR---HEGGEGKVRYF 400
Query: 650 TDGSVLFSGKRKNDIYKIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLN 709
+ G N +Y + S ++S+ + +WH RLGH S+ + L+
Sbjct: 401 KNNKTALRGSLSNGLYVLDGSTVMSELCNAETD-KVKTALWHSRLGHMSMNNLKVLAGKG 459
Query: 710 LVRGLPHLKYSSEALCEACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFG-PVKTESIGG 768
L+ + + CE C GK K F S L +H DL+G P T SI G
Sbjct: 460 LI---DRKEINELEFCEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGSPNVTPSISG 515
Query: 769 KKYELVIVDDYSRWTWVKFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKA 828
K+Y L I+DD +R W+ FL+ KDET F + + V+ + V +R+D+G EF N
Sbjct: 516 KQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSR 575
Query: 829 FEDLFNSQGISHNFSCPRTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACY 888
F+ GI + +C TPQQNGV ER N T+ E R ++ +S + + FWAEA TA Y
Sbjct: 576 FDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAY 635
Query: 889 IQNRISIRPILEKTPYELCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGY 948
+ NR I P E+ R+P + FGS ++ + GK +ALK +FLGY
Sbjct: 636 LINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYV---HQDQGKLKPRALKGFFLGY 692
Query: 949 SERSKGFRIY-----------NIIHQ--TVEESIQIRFDD--KLGSEKSKLFE----RFA 989
+KG++++ N++ Q V ++++ DD L +++ E +FA
Sbjct: 693 PAGTKGYKVWLLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFA 752
Query: 990 DLS-----IDCSEANQPIKSPEDVAPEAEASEDFPTTSDPLQKKKRIVASHPEELIIGNK 1044
+ S I ++PI E + E E T + ++ + + N
Sbjct: 753 EASGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNI 812
Query: 1045 DAPVRTRSMLKPSEETLLSLKGFVSLIEPKSVDEALEDKG---WIQAMQEELDQFTKNDV 1101
+ P TR + S L + + EP+S EA+E + W A +E+D KN
Sbjct: 813 NPP--TRFTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGT 870
Query: 1102 WTLMPKPKGFHVIGTKWVFRNKLNEKG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARL 1160
W L+ KPK +IG +W+F+ K G E TR KARLVA+GY+Q+EG+DY E FAPV +
Sbjct: 871 WDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKH 930
Query: 1161 EAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLY 1220
+IR+L+S V+ ++ L QMDVK+ FL+G + EE+Y++QP GF + V +LKKSLY
Sbjct: 931 VSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLY 990
Query: 1221 GLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFCR-TYKNDILIVQIYVDDIIFGSANPSL 1279
GLKQ+PR W +R F+ +F+R + D ++ + ++D + + +YVDD++ A+ +
Sbjct: 991 GLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAE 1050
Query: 1280 CKEFSKLMQAEFEMSMMGELKYFLGIQI--DQRPGVTYIHQKKYTLELLKKFNMSDCNIS 1337
+ + EFEM MG LGI I D++ GV + Q+ Y ++L +FNMS ++
Sbjct: 1051 INRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMT 1110
Query: 1338 KTPMHP----TCILEKEE-VSSKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSD 1391
P+ + E++E V + V Y +GS++Y + +RPD+ +++ L +R+ S
Sbjct: 1111 NAPVGAHFKLAAVREEDECVDTDVVP--YSSAVGSIMYAMLGTRPDLAYAICLISRYMSK 1168
Query: 1392 PRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLG 1451
P H AVK +++YLKG +L L++ K ++T++G+CD+++A D R+S SG +G
Sbjct: 1169 PGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIG 1228
Query: 1452 SNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLEDYGLSLKKVPIYCDNTAAI 1511
N V+W + Q +A+ST EAEY++ A + +W+K L+D G+ KV I+CD+ +AI
Sbjct: 1229 GNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAI 1288
Query: 1512 SLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
LSKN + H R KHI+V+++YIRD V+ G + + + T
Sbjct: 1289 CLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHT 1326
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 533 bits (1373), Expect = e-151
Identities = 343/1038 (33%), Positives = 541/1038 (52%), Gaps = 65/1038 (6%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSI----GDGKTPVIND 613
W LD+GCS HMT R F + +GG V G ++ G G+I DG T V+ +
Sbjct: 309 WILDTGCSYHMTYKREWFHEFNE-DAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLTN 367
Query: 614 VLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELL 673
V + + NLLS+ GY ++ G + + VL +G+R + +Y + +
Sbjct: 368 VRYIPDMDRNLLSLGTFEKAGYK-FESEDGILRI-KAGNQVLLTGRRYDTLYLLNWKPVA 425
Query: 674 SQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQKGKF 733
S+ + + +D +WH+RL H S + + L + L K SS +CE C GK
Sbjct: 426 SESLAVVKRADDTV-LWHQRLCHMSQKNMEILVRKGF---LDKKKVSSLDVCEDCIYGKA 481
Query: 734 TKKPFKAKNVVSTTRPLELLHIDLFG-PVKTESIGGKKYELVIVDDYSRWTWVKFLRHKD 792
+K F + T LE +H DL+G P S+G +Y + I+DD++R WV F++ KD
Sbjct: 482 KRKSFSLAHH-DTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKD 540
Query: 793 ETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQNG 852
E F ++ V+ + V T+R+D+G EF NK F+ S GI + +C TPQQNG
Sbjct: 541 EAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNG 600
Query: 853 VVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGRQP 912
V ER N T+ E R+M+ +S + K FWAEA +T + N+ + + P + G P
Sbjct: 601 VAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPP 660
Query: 913 DISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIY-----------NII 961
SY +G F+ +T + GK + +A K +GY KG++++ NII
Sbjct: 661 VYSYLRRYGCVAFV-HTDD--GKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNII 717
Query: 962 HQTV---------EESIQIRFDDKLGSEKSKLFERFAD-LSIDCSEANQPIKSPEDVAPE 1011
Q +E++ DD+ GS E D +S E I +PE
Sbjct: 718 FQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPESPVVS 777
Query: 1012 AEASEDFPTTSDPLQKKKRIVASHPEEL-IIGNKD-----APVRTRSMLKPSEETLLSLK 1065
PTT D + V P ++ ++D AP R +E +
Sbjct: 778 T------PTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTED 831
Query: 1066 GFVSLIEPKSVDEALEDKG---WIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRN 1122
G +EP++ +A D W AM EE+D KN+ WT++ +P+ +IG +W+F+
Sbjct: 832 G--EAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKY 889
Query: 1123 KLNEKG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMD 1181
KL G E R KARLVA+GY+Q+EGIDY E FAPV + +IR+L+S ++ L Q+D
Sbjct: 890 KLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLD 949
Query: 1182 VKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNE 1241
VK+AFL+G + E++Y+ P G+E V L K+LYGLKQAP+ W E+ +F+ +
Sbjct: 950 VKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEIC 1009
Query: 1242 FVRGKGDNTLFCRTYKN-DILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELK 1300
FV+ D+ + + + ++ + IYVDDI+ S N + FEM +G K
Sbjct: 1010 FVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAK 1069
Query: 1301 YFLGIQI--DQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHP----TCILEKEEVSS 1354
LG++I D+ GV ++ Q+ Y ++L+ +NM++ + TP+ E++ +
Sbjct: 1070 KILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRD 1129
Query: 1355 KVCQKL--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTT 1411
+ K Y +GS++Y + +RPD+ + V + +RF S P + H VK +L+Y+KGT
Sbjct: 1130 EDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTL 1189
Query: 1412 NLGLMYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAE 1471
L Y+K+S +++ G+CDAD+A D +R+S +G LG N ++W S Q +A ST E
Sbjct: 1190 KTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTE 1249
Query: 1472 AEYVSAATCCTQTIWMKNHLEDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYH 1531
+EY+S + IW+K L+D+G K V I+CD+ +AI+LSKN + H R KHI+VKYH
Sbjct: 1250 SEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYH 1309
Query: 1532 YIRDHVQKGTLSLEYVDT 1549
+IR+ + GT+ + + T
Sbjct: 1310 FIREIISDGTVEVLKIST 1327
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 520 bits (1338), Expect = e-147
Identities = 337/1041 (32%), Positives = 535/1041 (51%), Gaps = 68/1041 (6%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSI----GDGKTPVIND 613
W LD+GCS HMT + F+ L SG V G + + G GSI DG ++ D
Sbjct: 285 WVLDTGCSFHMTPRKDWFKDFKELSSGY-VKMGNDTYSPVKGIGSIKIRNSDGSQVILTD 343
Query: 614 VLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELL 673
V + + NL+S+ + D+G +Q G + + ++L G++++ +Y I
Sbjct: 344 VRYMPNMTRNLISLGTLEDRGC-WFKSQDGILKIVKGCSTIL-KGQKRDTLY-ILDGVTE 400
Query: 674 SQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRG--LPHLKYSSEALCEACQKG 731
+ V DE +WH RLGH S + + L K +R + L++ CE C G
Sbjct: 401 EGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEF-----CEDCVYG 455
Query: 732 KFTKKPFKAKNVVSTTRPLELLHIDLFG-PVKTESIGGKKYELVIVDDYSRWTWVKFLRH 790
K + F V T L +H DL+G P S+G +Y + VDDYSR W+ FLR
Sbjct: 456 KQHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRK 514
Query: 791 KDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQ 850
KDE F + V+ + V +R+D+G E+ N FE +GI + +C TPQQ
Sbjct: 515 KDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQ 574
Query: 851 NGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGR 910
NG+ ER N T+ + R+M+ S M K FWAEA +TA Y+ NR I P E G
Sbjct: 575 NGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGA 634
Query: 911 QPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIY------NIIHQT 964
PD+S FG ++ GK + ++ K F Y E KG++++ +I +
Sbjct: 635 LPDLSSLRKFGCLAYI---HADQGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRN 691
Query: 965 VEESIQIRFDDKLGSEKSKLFER-FADLSIDCSEANQPIKSPEDVAPEAEASEDFPTTSD 1023
V Q+ F D G ++ + E DL ++ P + ++ + A++D S+
Sbjct: 692 VIFREQVMFKDLKGDSQNTISESDLEDLRVN------PDMNDQEFTDQGGATQDNSNPSE 745
Query: 1024 PLQKKKRIVAS--HPEELIIGNKDAPV------------RTRSMLKPSEE-TLLSLKGFV 1068
++ S H ++ +D+ R R +K + + ++ GF
Sbjct: 746 ATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFA 805
Query: 1069 ------SLIEPKSVDEALEDKGWIQ---AMQEELDQFTKNDVWTLMPKPKGFHVIGTKWV 1119
EPKS EAL D W + AM+EE+ +KN W L+ KP+ +IG +WV
Sbjct: 806 YYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWV 865
Query: 1120 FRNKLNEKG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILH 1178
F K G E R ARLVA+G++Q+EG+DY E F+PV + +IR L+S V++N+ L
Sbjct: 866 FTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQ 925
Query: 1179 QMDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLL 1238
QMDVK+AFL+G++ EE+Y+ QP GFE + V LK+SLYGLKQ+PR W R F+
Sbjct: 926 QMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMR 985
Query: 1239 QNEFVRGKGDNTLFCRTYKNDILI-VQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMG 1297
++ R D+ ++ + D I + +YVDD++ SAN S E +L+ EFEM +G
Sbjct: 986 GIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLG 1045
Query: 1298 ELKYFLGIQI--DQRPGVTYIHQKKYTLELLKKFNMSDCNISKTP------MHPTCILEK 1349
+ K LG++I D+ G+ + Q+ Y ++L+ F M + TP + E
Sbjct: 1046 DAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEY 1105
Query: 1350 EEVSSKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLK 1408
EE ++ Y IGS++Y + +RPD+ +S+ + +RF S P + H AVK +L+Y++
Sbjct: 1106 EEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Query: 1409 GTTNLGLMYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALS 1468
GT L +RK ++ L G+CD+D+ + R+S +G +G N ++W SK Q +A+S
Sbjct: 1166 GTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAIS 1225
Query: 1469 TAEAEYVSAATCCTQTIWMKNHLEDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEV 1528
+ EAEY++ + +W+K + G S V ++ D+ +AI+L+KN + H R KHI++
Sbjct: 1226 STEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDI 1285
Query: 1529 KYHYIRDHVQKGTLSLEYVDT 1549
+ H+IRD + G + + + T
Sbjct: 1286 RLHFIRDIICAGLIKVVKIAT 1306
>At1g26990 polyprotein, putative
Length = 1436
Score = 516 bits (1330), Expect = e-146
Identities = 327/1026 (31%), Positives = 522/1026 (50%), Gaps = 76/1026 (7%)
Query: 557 SWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSIGDGKTPVINDVLL 616
+W +DSG S H+T R+++ L V KI G G I +++VL
Sbjct: 420 AWVIDSGASHHVTHERNLYHTYKALDRTF-VRLPNGHTVKIEGTGFIQLTDALSLHNVLF 478
Query: 617 VEGLFHNLLSISQIADKGYD-VIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELLSQ 675
+ NLLS+S + V F C + T +L G + ++Y + + L
Sbjct: 479 IPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVD 538
Query: 676 ------KVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEAL-CEAC 728
K C SV +E +WH+RLGH S KI LS + + LP K + ++ C C
Sbjct: 539 VSSFPGKSVC-SSVKNESEMWHKRLGHPSFAKIDTLSDVLM---LPKQKINKDSSHCHVC 594
Query: 729 QKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFL 788
K PFK+ N + + EL+HID +GP ++ +Y L IVDD+SR TW+ L
Sbjct: 595 HLSKQKHLPFKSVNHIRE-KAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLL 653
Query: 789 RHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTP 848
+ K + T+F +F+ V+ ++ + V +VRSD+ E + F +LF +GI + CP TP
Sbjct: 654 KQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELK---FNELFAKEGIKADHPCPETP 710
Query: 849 QQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCK 908
+QN VVERK+ L +AR +M +S + +W + + TA ++ NR+ I +TPYE
Sbjct: 711 EQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLT 770
Query: 909 GRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEES 968
+PD S FG C+ + + KFD +A C FLGY KG+++ +I +V S
Sbjct: 771 KGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSIS 830
Query: 969 IQIRFDDKLG-------SEKSKLFERFADLSIDCSEANQPIKSPEDVAPEA--EASEDFP 1019
+ F + + ++ +K F L ++ + P+ AP E+S
Sbjct: 831 RHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSMIF 890
Query: 1020 TTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEETLL------SLKGFVSLIE- 1072
S+P ++R + SH ++ N + P T++ P + F+++I
Sbjct: 891 VPSEPKSTRQRKLPSHLQDFHCYN-NTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITA 949
Query: 1073 ---PKSVDEALEDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGE 1129
P+ EA DK W AM +E+ F + W++ P G +G KW+ K G
Sbjct: 950 TKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGS 1009
Query: 1130 VTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNG 1189
+ R+KARLVA+GY+QQEGID+ TF+PVA++ +++L+S + LHQ+D+ +A LNG
Sbjct: 1010 IERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNG 1069
Query: 1190 YISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDN 1249
+ EE+Y+K PPG+ + + G + +P A + GD+
Sbjct: 1070 DLEEEIYMKLPPGYSE-------------IQGQEVSPNA---------------KCHGDH 1101
Query: 1250 TLFCRTYKNDILIVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQ 1309
TLF + L+V +YVDDI+ S + E + + + F++ +GE K+FLGI+I +
Sbjct: 1102 TLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIAR 1161
Query: 1310 RPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLL 1369
+ Q+KY L+LL + SDC S PM P L K+ + K YR ++G L
Sbjct: 1162 NADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQ 1221
Query: 1370 YLTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFC 1429
YL +RPDI F+V A++ S P + HL A+ +IL+YLKGT GL Y + + L GF
Sbjct: 1222 YLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFS 1281
Query: 1430 DADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKN 1489
D+D+ R+ +G F+G++LV+W SK+Q+ +++S+AEAEY + + + IW+
Sbjct: 1282 DSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWL-- 1339
Query: 1490 HLEDYGLSLKKVP------IYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLS 1543
Y L+ K+P +YCDN AA+ ++ N + H R KHIE H +R+ ++ G L
Sbjct: 1340 ---GYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILK 1396
Query: 1544 LEYVDT 1549
+V T
Sbjct: 1397 TIFVRT 1402
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 511 bits (1317), Expect = e-145
Identities = 334/1040 (32%), Positives = 542/1040 (52%), Gaps = 84/1040 (8%)
Query: 557 SWYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSIG----DGKTPVIN 612
+W LD+GCS HMT + SG V G + ++ G G + DG T ++
Sbjct: 311 TWILDTGCSFHMTCRKDWIIDFKETASG-KVRMGNDTYSEVKGIGDVRIKNEDGSTILLT 369
Query: 613 DVLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSEL 672
DV + + NL+S+ + DKG ++ G + + D +VL +GK+++ +Y ++ + L
Sbjct: 370 DVRYIPEMSKNLISLGTLEDKGC-WFESKKGILTIFKNDLTVL-TGKKESTLYFLQGTTL 427
Query: 673 LSQKVKCLMSVNDEQWIWHRRLGHASLRKISQL-SKLNLVRGLPHLKYSSEALCEACQKG 731
+ + DE +WH RLGH + + L SK +L + + + + +
Sbjct: 428 AGE-ANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNIM-ISFGA---------- 475
Query: 732 KFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTE-SIGGKKYELVIVDDYSRWTWVKFLRH 790
AK+V T L+ +H DL+G SIG +Y + +DD++R TW+ F+R
Sbjct: 476 --------AKHV--TKDKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIYFIRT 525
Query: 791 KDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQ 850
KDE + F + TQ++ + + + +D+G EF N+ F+ +G+ + +C TPQQ
Sbjct: 526 KDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQ 585
Query: 851 NGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGR 910
NGV ER N T+ R M+ ES + K FWAEA +TA ++ N+ I P E G
Sbjct: 586 NGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGH 645
Query: 911 QPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQ 970
PD FGS ++ + + GK + +A K FLGY + K F+++ + + S
Sbjct: 646 PPDYKILKKFGSVAYIHSDQ---GKLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRD 702
Query: 971 IRF----------------DDKLGSEKSKLFERFADLSIDCSEANQPIKSPEDVAPEAEA 1014
I F +DK +E + +LS D + NQ D + + +A
Sbjct: 703 IVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLSAD--DENQ--SEGGDNSNQEQA 758
Query: 1015 SEDFPTTSDPLQKKKRIVASHPEELIIGNKD-APVRTRSMLKPSEETLL---SLKGFV-- 1068
S T+ K K++ + ++ + N A R R ++ + + SL GF
Sbjct: 759 S-----TTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALT 813
Query: 1069 -----SLIEPKSVDEAL---EDKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVF 1120
+ EP++ +EA+ E + W QA EE+D KND W ++ KP+G VIG KW+F
Sbjct: 814 MTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIF 873
Query: 1121 RNKLNEKG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQ 1179
+ K G E R KARLVA+G+SQ+EGIDY E F+PV + +IR L+S V ++ L Q
Sbjct: 874 KRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQ 933
Query: 1180 MDVKSAFLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQ 1239
+DVK+AFL+G + E + + QP G+ED E V LKKSLYGLKQ+PR W +R SF++
Sbjct: 934 LDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMIN 993
Query: 1240 NEFVRGKGDNTLFCRTYKNDILI-VQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGE 1298
+ + R K + ++ + + I + +YVDD++ S N ++ + + EFEM +G
Sbjct: 994 SGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGP 1053
Query: 1299 LKYFLGIQI--DQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHPTCIL----EKEEV 1352
+ LG++I ++ G+ + Q +Y +L+ F M +S+TP+ L EK
Sbjct: 1054 ARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLA 1113
Query: 1353 SSKVCQKL--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKG 1409
KL Y IGS++Y + SRPD+ + V + +RF S P + H AVK +++Y+KG
Sbjct: 1114 RDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKG 1173
Query: 1410 TTNLGLMYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALST 1469
T + L ++K ++ + G+CD+D+A D R+S +G G N ++W S Q +ALST
Sbjct: 1174 TQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALST 1233
Query: 1470 AEAEYVSAATCCTQTIWMKNHLEDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVK 1529
EAEY++ A + IW++ + G V + CD+ +AI+LSKN + H R KHI+V+
Sbjct: 1234 TEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVR 1293
Query: 1530 YHYIRDHVQKGTLSLEYVDT 1549
YH+IR+ + G + + + T
Sbjct: 1294 YHFIREKIADGEIQVVKIST 1313
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 506 bits (1303), Expect = e-143
Identities = 327/1034 (31%), Positives = 541/1034 (51%), Gaps = 58/1034 (5%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSIG----DGKTPVIND 613
W +D+GCS HMT R F+ L +GG V G K+ G G+I G + +
Sbjct: 287 WVMDTGCSYHMTYKREWFEDLNE-DAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTN 345
Query: 614 VLLVEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELL 673
V + + NLLS+ GY + G ++ D SVL + +R +Y ++ +
Sbjct: 346 VRYIPEMDRNLLSLGTFEKSGYSFKL-ENGTLSIIAGD-SVLLTVRRCYTLYLLQWRPVT 403
Query: 674 SQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALCEACQKGKF 733
+ + ++ D+ +WHRRLGH S + + L K L L K S CE C GK
Sbjct: 404 EESLS-VVKRQDDTILWHRRLGHMSQKNMDLLLKKGL---LDKKKVSKLETCEDCIYGKA 459
Query: 734 TKKPFKAKNVVSTTRPLELLHIDLFG-PVKTESIGGKKYELVIVDDYSRWTWVKFLRHKD 792
+ F T LE +H DL+G P S+G +Y + +DDY+R + FL+ KD
Sbjct: 460 KRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKD 518
Query: 793 ETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQNG 852
E F + V+ + + T+R+D+G EF N++F++ + +GI + +C TPQQNG
Sbjct: 519 EAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNG 578
Query: 853 VVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGRQP 912
V ER N TL E R+M+ +S + K FWAEA +T + N+ + + P + G+ P
Sbjct: 579 VAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSP 638
Query: 913 DISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQIR 972
SY FG F+ +T + GK + +A K +GY KG++I+ + + S +
Sbjct: 639 IYSYLRRFGCIAFV-HTDD--GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVI 695
Query: 973 FDDKLGSE---KSKLFER---------FADLSIDCSEANQPIKSPEDVAPEAEASEDF-- 1018
F + + +SK E+ + DL +D E I S D P EA F
Sbjct: 696 FQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEV---ITSGGD-DPIVEAQSPFNP 751
Query: 1019 -----PTTSDPLQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEETLLSLKGFVSL--- 1070
T S+ + + I+ S ++ ++D R+ ++ +E L+ + +
Sbjct: 752 SPATTQTYSEGVNSETDIIQSPLSYQLVRDRDRRT-IRAPVRFDDEDYLAEALYTTEDSG 810
Query: 1071 -IEPKSVDEALEDKGWIQ---AMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNE 1126
IEP EA W + AM EE++ KN WT++ +P+ VIG++W+++ KL
Sbjct: 811 EIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGI 870
Query: 1127 KG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSA 1185
G E R KARLVA+GY+Q++GIDY E FAPV + +IR+L+S ++ L Q+DVK+A
Sbjct: 871 PGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTA 930
Query: 1186 FLNGYISEEVYVKQPPGFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRG 1245
FL+G + E++Y+ P G+E+ + V L KSLYGLKQAP+ W E+ ++++ + F+R
Sbjct: 931 FLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRS 990
Query: 1246 KGDNTLFCRTYKNDILI-VQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLG 1304
D+ + + + + + +YVDD++ + N + + + F+M +G K LG
Sbjct: 991 LYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILG 1050
Query: 1305 IQI--DQRPGVTYIHQKKYTLELLKKFNMSDCNISKTPMHP-----TCILEKEEVSSKVC 1357
++I ++ ++ Q Y ++L+ +NM++ TP+ +EK+E
Sbjct: 1051 MEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYM 1110
Query: 1358 QKL-YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGL 1415
+ + Y +GS++Y + +RPD+ + V + +R+ S P H VK +L+Y+KG+ L
Sbjct: 1111 KSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKL 1170
Query: 1416 MYRKTSEYTLSGFCDADFAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYV 1475
Y+++S++ + G+CDAD A + R+S +G LG + ++W S +Q +ALST EAEY+
Sbjct: 1171 QYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYM 1230
Query: 1476 SAATCCTQTIWMKNHLEDYGLSLKKVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRD 1535
S + +WMK L+++G K V I+CD+ +AI+LSKN + H R KHI+V+Y YIRD
Sbjct: 1231 SLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRD 1290
Query: 1536 HVQKGTLSLEYVDT 1549
+ G + +DT
Sbjct: 1291 IIANGDGDVVKIDT 1304
>At4g17450 retrotransposon like protein
Length = 1433
Score = 498 bits (1283), Expect = e-141
Identities = 309/1008 (30%), Positives = 505/1008 (49%), Gaps = 57/1008 (5%)
Query: 558 WYLDSGCSRHMTGTRSIFQKLTPLKSGGDVGFGGNQKGKIIGKGSIGDGKTPVINDVLLV 617
W +DSG + H+T R ++ L++ V + KI G G I +++VL +
Sbjct: 432 WVIDSGATHHVTHNRDLYLNFRSLENTF-VRLPNDCTVKIAGIGFIQLSDAISLHNVLYI 490
Query: 618 EGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKNDIYKIRSSELLSQKV 677
NL+S + + SQ + N ++ + + +
Sbjct: 491 PEFKFNLIS----------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPEF 540
Query: 678 KCLMSVNDEQWIWHRRLGHASLRKISQLSK-LNLVRGLPHLKYSSEA-LCEACQKGKFTK 735
SV + WH+RLGH + KI LS LNL + ++S +C C K
Sbjct: 541 SVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKH 600
Query: 736 KPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWVKFLRHKDETH 795
F+++ + + +L+HID +GP + TW+ L++K +
Sbjct: 601 LSFQSRQNMCSAA-FDLVHIDTWGPFSVPTNDA--------------TWIYLLKNKSDVL 645
Query: 796 TMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCPRTPQQNGVVE 855
+F FI V ++Q+ + +VRSD+ E + F DLF + GI SCP TP+QN VVE
Sbjct: 646 HVFPAFINMVHTQYQTKLKSVRSDNAHELK---FTDLFAAHGIVAYHSCPETPEQNSVVE 702
Query: 856 RKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYELCKGRQPDIS 915
RK+ + +AR ++ +S++ FW + + TA ++ NR+ + K+PYE K P
Sbjct: 703 RKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYE 762
Query: 916 YFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTVEESIQIRFDD 975
FG C+ + +Q KF+ +A C FLGY KG+++ +I V S + F +
Sbjct: 763 SLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHE 822
Query: 976 KL-----GSEKSKLFERFADLSIDCSEANQPIKSPE--DVAPEAEASEDFPTTS-DPLQK 1027
+ + K + + F L + P++ D P + S DPL K
Sbjct: 823 DIFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQDVSSSKALVPFDPLSK 882
Query: 1028 KKRIVASHPEELIIGNKDAPVRTRSMLKPSEETLLSLKGFVSLIEPKSVDEALEDKGWIQ 1087
+++ H ++ N +E + + + P+ EA + K W
Sbjct: 883 RQKKPPKHLQDFHCYNNT-----------TEPFHAFINNITNAVIPQRYSEAKDFKAWCD 931
Query: 1088 AMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEVTRNKARLVAQGYSQQEG 1147
AM+EE+ + + W+++ P IG KWVF K N G + R KARLVA+GY+Q+EG
Sbjct: 932 AMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEG 991
Query: 1148 IDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVKQPPGFED-- 1205
+DY ETF+PVA+L ++R+++ + +HQ+D+ +AFLNG + EE+Y+K PPG+ D
Sbjct: 992 LDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLV 1051
Query: 1206 --NKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFCRTYKNDILI- 1262
P + +L KS+YGLKQA R WY +LS+ L F + D+TLF + Y N +L+
Sbjct: 1052 GEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIK-YANGVLMG 1110
Query: 1263 VQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQIDQRPGVTYIHQKKYT 1322
V +YVDDI+ S + +F+ +++ F++ +G KYFLGI+I + I Q+KY
Sbjct: 1111 VLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYI 1170
Query: 1323 LELLKKFNMSDCNISKTPMHPTCILEKEEVSSKVCQKLYRGMIGSLLYLTASRPDILFSV 1382
LELL S P+ P+ L KE+ YR ++G L+YL +RPDI ++V
Sbjct: 1171 LELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAV 1230
Query: 1383 HLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDADFAGDRVERKS 1442
+ +F P HL+AV ++L+YLKGT GL Y ++ L G+ D+DF R+
Sbjct: 1231 NTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRC 1290
Query: 1443 TSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLEDYGLS-LKKV 1501
+ C F+G LV+W SK+Q+T+++STAEAE+ + + + IW+ +D+ + +
Sbjct: 1291 VAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPA 1350
Query: 1502 PIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
+YCDNTAA+ + N + H R K +E+ + R+ V+ G L +V+T
Sbjct: 1351 YLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVET 1398
>At4g03810 putative retrotransposon protein
Length = 964
Score = 484 bits (1245), Expect = e-136
Identities = 300/960 (31%), Positives = 498/960 (51%), Gaps = 64/960 (6%)
Query: 617 VEGLFHNLLSISQIADKGYDVIFNQTGCKAVSQTDGSVLFSGKRKND-----------IY 665
V + N++S+S + +G+ C D +F G D IY
Sbjct: 11 VPAINKNIISVSCLDMEGFHFSIKNKCCSF----DRDDMFYGSAPLDNGLHVLNQSMPIY 66
Query: 666 KIRSSELLSQKVKCLMSVNDEQWIWHRRLGHASLRKISQLSKLNLVRGLPHLKYSSEALC 725
IR+ + S + + ++WH RLGH + + I +L L+ + Y + C
Sbjct: 67 NIRTKKFKSNDL-------NPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYET---C 116
Query: 726 EACQKGKFTKKPFKAKNVVSTTRPLELLHIDLFGPVKTESIGGKKYELVIVDDYSRWTWV 785
E+C GK TK PF + ++ L L+H D+ GP+ T + G +Y + DD+SR+ +V
Sbjct: 117 ESCLLGKMTKAPFTGHSERASDL-LGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYV 175
Query: 786 KFLRHKDETHTMFTNFITQVQKEFQSSVITVRSDHGGEFENKAFEDLFNSQGISHNFSCP 845
++HK ++ F F +VQ +F S+ +RSD GGE+ ++ F D GI + P
Sbjct: 176 YLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPP 235
Query: 846 RTPQQNGVVERKNITLQEMARTMMQESSMAKHFWAEAINTACYIQNRISIRPILEKTPYE 905
TPQ NGV ER+N TL +M R+MM + + FW A+ T+ ++ NR + + EKTPYE
Sbjct: 236 GTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-EKTPYE 294
Query: 906 LCKGRQPDISYFHPFGSTCFMLNTKEQLGKFDSKALKCYFLGYSERSKGFRIYNIIHQTV 965
+ G+ P++S+ +G C + K K+ KCYF+GY + +KG+ Y H T
Sbjct: 295 IWTGKVPNLSFLKIWG--CESYAKRLITDKLGPKSDKCYFVGYPKETKGYYFY---HPTD 349
Query: 966 EESIQIRFDDKLGSEKSKLFERFADLSIDCSEANQPIKSPEDVAPEAEASE-DFPTTSDP 1024
+ +R L E+ L + + + E +P DV E + D +P
Sbjct: 350 NKVFVVRNGAFL--EREFLSKGTSGSKVLLEEVREP---QGDVPTSQEEHQLDLRRVVEP 404
Query: 1025 LQKKKRIVASHPEELIIGNKDAPVRTRSMLKPSEETLLSLKGFVSLIEPKSVDEAL---E 1081
+ + + S ++ P R R + + + EP S +EAL +
Sbjct: 405 ILVEPEVRRSER------SRHEPDRFRDWVMDDHALFM-----IESDEPTSYEEALMGPD 453
Query: 1082 DKGWIQAMQEELDQFTKNDVWTLMPKPKGFHVIGTKWVFRNKLNEKGEVTRNKARLVAQG 1141
W++A + E++ ++N VWTL+ P G I KW+F+ K++ G + KA LVA+G
Sbjct: 454 SDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKG 513
Query: 1142 YSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIILHQMDVKSAFLNGYISEEVYVKQPP 1201
Y Q GIDY ET++PVA L++IR+L++ + +++ + QMDVK+AFLNG + E VY+ QP
Sbjct: 514 YKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPE 573
Query: 1202 GFEDNKHPEHVYKLKKSLYGLKQAPRAWYERLSSFLLQNEFVRGKGDNTLFCRTYKNDIL 1261
GF + V KL +S+YGLKQA R+W R + + + +F+R + + ++ +T + +
Sbjct: 574 GFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVA 633
Query: 1262 IVQIYVDDIIFGSANPSLCKEFSKLMQAEFEMSMMGELKYFLGIQI--DQRPGVTYIHQK 1319
+ +YVDDI+ + L + + + F M MGE Y LGI+I D+ + + Q
Sbjct: 634 FLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQD 693
Query: 1320 KYTLELLKKFNMSDCNISKTPMHPTCILEKEEVSS------KVCQKLYRGMIGSLLY-LT 1372
Y ++L +FNM D PM L K + S ++ + Y IGS++Y +
Sbjct: 694 TYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAML 753
Query: 1373 ASRPDILFSVHLCARFQSDPRETHLTAVKRILKYLKGTTNLGLMYRKTSEYTLSGFCDAD 1432
+RPD+ ++ + +R+QSDP E+H V+ I KYL+ T + L+Y + E +SG+ DA
Sbjct: 754 YTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDAS 813
Query: 1433 FAGDRVERKSTSGSCHFLGSNLVTWSSKRQNTIALSTAEAEYVSAATCCTQTIWMKNHLE 1492
F D+ + +S SG L V+W S +Q+T+A ST EAEY++A+ + +W++ +
Sbjct: 814 FQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFIT 873
Query: 1493 DYGLSLK---KVPIYCDNTAAISLSKNPILHSRAKHIEVKYHYIRDHVQKGTLSLEYVDT 1549
+ G+ + +YCDN AI+ +K P H ++KHI+ +YH IR+ + +G + + V T
Sbjct: 874 ELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVST 933
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.330 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,045,729
Number of Sequences: 26719
Number of extensions: 1340431
Number of successful extensions: 4729
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4007
Number of HSP's gapped (non-prelim): 289
length of query: 1549
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1437
effective length of database: 8,326,068
effective search space: 11964559716
effective search space used: 11964559716
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0240.16