BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0226.9
         (223 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g13250 hypothetical protein                                        233  5e-62
At3g42100 putative protein                                            232  1e-61
At1g35940 hypothetical protein                                        231  3e-61
At3g31980 hypothetical protein                                        229  7e-61
At3g30560 hypothetical protein                                        226  1e-59
At5g34960 putative protein                                            221  2e-58
At2g07620 putative helicase                                           203  5e-53
At2g14470 pseudogene                                                  200  6e-52
At1g52960 hypothetical protein                                        195  1e-50
At1g54430 hypothetical protein                                        187  4e-48
At3g30420 hypothetical protein                                        184  2e-47
At3g31440 hypothetical protein                                        181  2e-46
At5g37110 putative helicase                                           178  2e-45
At2g05080 putative helicase                                           178  2e-45
At3g51700 unknown protein                                             173  6e-44
At5g28780 putative protein                                            166  9e-42
At2g14300 pseudogene; similar to  MURA transposase of maize Muta...   156  9e-39
At5g32630 putative protein                                            154  5e-38
At4g03690 hypothetical protein                                        149  1e-36
At3g43350 putative protein                                            140  5e-34

>At3g13250 hypothetical protein
          Length = 1419

 Score =  233 bits (595), Expect = 5e-62
 Identities = 123/219 (56%), Positives = 153/219 (69%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAILAP  E V  +N YML  + + E  YLS+DS   SD DS +K    T +F N
Sbjct: 1201 KFFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPSDSDS-LKNPVITPDFLN 1259

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K SGMP+H L LKVG P+MLLRN+D    LCNGTRL + +L    + A VITG  +  
Sbjct: 1260 SIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCSHIVEAKVITGDRIGQ 1319

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             V+I  +++  SD+K P K R RQFP+++ F MTINKSQGQ+L QVGL+LP+PVF+HGQL
Sbjct: 1320 IVYIPLINITPSDTKLPFKMRRRQFPLSVAFVMTINKSQGQSLEQVGLYLPKPVFSHGQL 1379

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVALSRV S+ GLK+ ILD+ GK Q  T NVVFKEVF+N
Sbjct: 1380 YVALSRVTSKTGLKILILDKEGKIQKQTTNVVFKEVFQN 1418


>At3g42100 putative protein
          Length = 1752

 Score =  232 bits (591), Expect = 1e-61
 Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAILAPT E V  +N YML  + + E  YLS+DS   +D DS +     T +F N
Sbjct: 1533 KFFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADSIDPTDSDS-LANPVITPDFLN 1591

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              + +GMP+H L LKVG P+MLLRN+D    LCNGTRL + +L ++ + A VIT   + D
Sbjct: 1592 SIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLCNGTRLQITQLAKQVVQAKVITRDRIGD 1651

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             V I  ++L  SD+K P K R RQFP+++ FAMTINKSQGQ+L QVGL+LP+PVF+HGQL
Sbjct: 1652 IVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEQVGLYLPKPVFSHGQL 1711

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVALSRV S+KGLK+ ILD+ G  Q  T NVVFKEVF+N
Sbjct: 1712 YVALSRVTSKKGLKILILDKDGNMQKQTTNVVFKEVFQN 1750


>At1g35940 hypothetical protein
          Length = 1678

 Score =  231 bits (588), Expect = 3e-61
 Identities = 120/219 (54%), Positives = 153/219 (69%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAILAP  E V  +N Y+L  + A E  YLS+DS   +D DS +     T +F N
Sbjct: 1459 KFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDS-LNNPVITPDFLN 1517

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K  G+PNH L LKVG P+MLLRN+D    LCNGTRL + +L  + + A VITG  + +
Sbjct: 1518 SIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGN 1577

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             V I  ++L  +D+K P K R RQFP+++ FAMTINKSQGQ+L  +GL+LP+PVF+HGQL
Sbjct: 1578 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHIGLYLPKPVFSHGQL 1637

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVALSRV S+KGLK+ ILD+ GK Q  T NVVFKEVF+N
Sbjct: 1638 YVALSRVTSKKGLKILILDKDGKLQKQTTNVVFKEVFQN 1676


>At3g31980 hypothetical protein
          Length = 1099

 Score =  229 bits (585), Expect = 7e-61
 Identities = 119/219 (54%), Positives = 151/219 (68%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAIL P    V  +N  ML  +      YLS+DS    D  S +     T +F N
Sbjct: 879  KFFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADSIDPQDAAS-LNNPVLTPDFLN 937

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K SG+PNH L LK+GTP+MLLRNID    LCNGTRL V ++G   + A VITG  V D
Sbjct: 938  SIKLSGLPNHNLTLKIGTPVMLLRNIDPKGGLCNGTRLQVTQMGNHILEARVITGDRVGD 997

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
            KV I++  +  SD+K P + R RQFPIA+ FAMTINKSQGQ+L +VG++LP+PVF+HGQL
Sbjct: 998  KVIIIKSQISPSDTKLPFRMRRRQFPIAVAFAMTINKSQGQSLKEVGIYLPKPVFSHGQL 1057

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVALSRV S+KGLK+ I+D+ G  Q+ T+NVVFKE+F+N
Sbjct: 1058 YVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVFKEIFQN 1096


>At3g30560 hypothetical protein
          Length = 1473

 Score =  226 bits (575), Expect = 1e-59
 Identities = 116/219 (52%), Positives = 150/219 (67%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQDRAIL PT + V  +N +ML  +   E  Y SSDS   SD  ++ K   +T +F N
Sbjct: 1255 KFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRAD-KNPVYTPDFLN 1313

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K SG+PNH L LKVG P+MLLRN+D    L NGTRL +  LG++ +   ++TGT V  
Sbjct: 1314 KIKISGLPNHLLWLKVGCPVMLLRNLDSHGGLMNGTRLQIVRLGDKLVQGRILTGTRVGK 1373

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             V I RM L  SD + P K + RQFP+++ FAMTINKSQGQ+L  VG++LP+PVF+HGQL
Sbjct: 1374 LVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFAMTINKSQGQSLGNVGIYLPKPVFSHGQL 1433

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVA+SRV+S+ GLK+ I D  GKQ+  T NVVFKE+F N
Sbjct: 1434 YVAMSRVKSKGGLKVLITDSKGKQKNETTNVVFKEIFRN 1472


>At5g34960 putative protein
          Length = 1033

 Score =  221 bits (564), Expect = 2e-58
 Identities = 118/219 (53%), Positives = 150/219 (67%), Gaps = 1/219 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAILAPT E V  +N Y+L  + A E  YLS+DS   +D +S +     T +F N
Sbjct: 814  KFFQGRAILAPTNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSNS-LNNPVITPDFLN 872

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K +G+PNH L LKV  P+MLLRN+D    LCNGTRL + +L  + + A VITG  +  
Sbjct: 873  SIKLAGLPNHSLRLKVSAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDIIGH 932

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             V I  ++L  +D+K P K R RQFP+++ FAMTIN SQGQ+L  VGL+LP+ VF+HGQL
Sbjct: 933  IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQGQSLEHVGLYLPKAVFSHGQL 992

Query: 185  YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
            YVALSRV S+KGLK  ILD+ GK Q  T NVVFKEVF+N
Sbjct: 993  YVALSRVTSKKGLKFLILDKDGKLQKQTTNVVFKEVFQN 1031


>At2g07620 putative helicase
          Length = 1241

 Score =  203 bits (517), Expect = 5e-53
 Identities = 102/186 (54%), Positives = 133/186 (70%), Gaps = 1/186 (0%)

Query: 38   YLSSDSALRSDEDSEIKVEWFTTEFSNDTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLC 97
            YLS+DS +   + + +    FT  F N  K SG+ NH L LK+GTP+MLL+NID    LC
Sbjct: 1054 YLSADS-IDPQDPASLNNPVFTPYFLNSIKLSGLSNHNLTLKIGTPVMLLKNIDPKGGLC 1112

Query: 98   NGTRLIVDELGERFIGATVITGTNVNDKVHILRMDLVLSDSKFPIKFRIRQFPIAICFAM 157
            NGTRL V ++G   + A VITG  V DKV I++  +  SD+K P + R RQFPIA+ FAM
Sbjct: 1113 NGTRLQVTQMGNHILEARVITGDRVRDKVIIIKAQISPSDTKLPFRMRRRQFPIAVAFAM 1172

Query: 158  TINKSQGQTLSQVGLFLPRPVFTHGQLYVALSRVRSRKGLKLCILDEAGKQQTSTVNVVF 217
             I KSQGQ+L +V ++LPRPVF+HGQLYVALSRV S+KGLK+ I+D+ G  Q+ T+NVVF
Sbjct: 1173 RIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVVF 1232

Query: 218  KEVFEN 223
            KE+F+N
Sbjct: 1233 KEIFQN 1238


>At2g14470 pseudogene
          Length = 1265

 Score =  200 bits (508), Expect = 6e-52
 Identities = 104/203 (51%), Positives = 138/203 (67%), Gaps = 1/203 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ RAILA   E V  +N Y+L  + A E  YLS+DS   +D DS +     T +F N
Sbjct: 1063 KFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSADSIDPTDSDS-LSNPVITPDFLN 1121

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K  G+PNH L LKVG P++LLRN+D    LCNGTRL + +L  + + A VITG  +  
Sbjct: 1122 SIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGDRIGH 1181

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
             + I  ++L  +++K P K R RQFP+++ F MTINKS+GQ+L  VGL+LP+PVF+HGQL
Sbjct: 1182 IILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINKSEGQSLEHVGLYLPKPVFSHGQL 1241

Query: 185  YVALSRVRSRKGLKLCILDEAGK 207
            YVALSRV S+KGLK+ ILD+ GK
Sbjct: 1242 YVALSRVTSKKGLKILILDKDGK 1264


>At1g52960 hypothetical protein
          Length = 924

 Score =  195 bits (496), Expect = 1e-50
 Identities = 104/194 (53%), Positives = 131/194 (66%), Gaps = 1/194 (0%)

Query: 5   QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
           +FFQ RAIL PT E V  +N +M+ M+   E  YLSSDS   +D  S    + ++ +F N
Sbjct: 730 KFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSDSIDPADTSSANN-DAYSADFLN 788

Query: 65  DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
             + SG+PNH L LKVG P+MLLRN+D    LCNGTRL V ++ +  I A  ITG  V  
Sbjct: 789 SVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGK 848

Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
            V I RM +  SD++ P K R RQFP+++ FAMTINKSQGQTL  VGL+LPRPVF+HGQL
Sbjct: 849 IVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQL 908

Query: 185 YVALSRVRSRKGLK 198
           YVA+SRV S+ G K
Sbjct: 909 YVAISRVTSKTGTK 922


>At1g54430 hypothetical protein
          Length = 1639

 Score =  187 bits (475), Expect = 4e-48
 Identities = 105/214 (49%), Positives = 142/214 (66%), Gaps = 5/214 (2%)

Query: 11   AILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEW-FTTEFSNDTKSS 69
            A+L P  E V+ +N Y+L  +     EY S+DS  R +  +E   E  +  E+ N  +  
Sbjct: 1417 AVLTPRNETVDEINDYLLSKVPGLAKEYFSADSIDRDEALTEEGFEMSYPMEYLNSLEFP 1476

Query: 70   GMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVN-DKVHI 128
            G+P H+L LKVG PIMLLRN++Q   LCNGTRLIV  LG++ + A +++ T     KV I
Sbjct: 1477 GLPAHRLCLKVGVPIMLLRNLNQKEGLCNGTRLIVTHLGDKVLKAEILSDTTKERKKVLI 1536

Query: 129  LRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLYVAL 188
             R+ L   DSK P   R RQFP+ +C+AMTINKSQGQTL++V L+LP+PVF+HGQLYVAL
Sbjct: 1537 PRIILSPQDSKHPFTLRRRQFPVRMCYAMTINKSQGQTLNRVALYLPKPVFSHGQLYVAL 1596

Query: 189  SRVRSRKGLKLCILDEAGKQQTSTV-NVVFKEVF 221
            SRV S KG  L +LD + K++   V N+V++EVF
Sbjct: 1597 SRVTSPKG--LTVLDTSKKKEGKYVTNIVYREVF 1628


>At3g30420 hypothetical protein
          Length = 837

 Score =  184 bits (468), Expect = 2e-47
 Identities = 104/217 (47%), Positives = 141/217 (64%), Gaps = 11/217 (5%)

Query: 11  AILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTT----EFSNDT 66
           A+L P  E V+ +N Y+L  +     EY S+DS    D+D  +  E F      E+ N  
Sbjct: 615 AVLTPRNETVDEINDYLLSKVPGLAKEYFSADSI---DQDEALTEEGFEMSYPMEYLNSL 671

Query: 67  KSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVN-DK 125
           +  G+P H+L LKVG PIMLLRN++Q   LCNGTRL V  LG++ + A +++ T     K
Sbjct: 672 EFPGLPAHRLCLKVGVPIMLLRNLNQKEGLCNGTRLTVTHLGDKVLKAEILSDTTKKRKK 731

Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
           V I R+ L   DSK P   R RQFP+ +C+AMT+NKSQGQTL++V L+LP+PVF+HGQLY
Sbjct: 732 VLIPRIILSPQDSKHPFTLRRRQFPVRMCYAMTVNKSQGQTLNRVALYLPKPVFSHGQLY 791

Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTV-NVVFKEVF 221
           VALSRV S KG  L +LD + K++   V N+V++EVF
Sbjct: 792 VALSRVTSPKG--LTVLDTSKKKEGKYVTNIVYREVF 826


>At3g31440 hypothetical protein
          Length = 536

 Score =  181 bits (460), Expect = 2e-46
 Identities = 104/219 (47%), Positives = 132/219 (59%), Gaps = 25/219 (11%)

Query: 5   QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
           +FFQ RAILAP  E V  +N Y+L  + A E  YLS+DS   +D DS +     T +F N
Sbjct: 341 KFFQGRAILAPKNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSDS-LNNPVITPDFLN 399

Query: 65  DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
             K  G                         LCNG RL + +L    + A VITG  +  
Sbjct: 400 SIKLPG------------------------GLCNGARLQITQLFTEIVEAKVITGDRIGH 435

Query: 125 KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQL 184
            V I  ++L  +D+K P K R RQFP+++ FAMTINKSQGQ+L  VGL+LP+PVF+HGQL
Sbjct: 436 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHVGLYLPKPVFSHGQL 495

Query: 185 YVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
           YVALSRV S+KGLK+ ILD+ GK Q  T N+VFKEVF+N
Sbjct: 496 YVALSRVTSKKGLKILILDKNGKLQKQTTNIVFKEVFQN 534


>At5g37110 putative helicase
          Length = 1307

 Score =  178 bits (451), Expect = 2e-45
 Identities = 95/194 (48%), Positives = 125/194 (63%), Gaps = 1/194 (0%)

Query: 6    FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
            FFQ++AIL PT E V  +N  ML  +   E  +LSSDS   +D   +      T +F N 
Sbjct: 1100 FFQEKAILCPTNEDVNQINETMLDNLQGEEFTFLSSDSLDPADIGGKNNPA-LTPDFLNS 1158

Query: 66   TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
             K S +PNH+L LK+G P+MLLRNID    L NGTRL + ++G   + A ++TG      
Sbjct: 1159 VKVSRLPNHKLRLKIGCPVMLLRNIDPIGGLMNGTRLRITQMGPFILQAMILTGDRAGHL 1218

Query: 126  VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
            V I R+ L  SD+K P + R  Q P+A+CFAMTINKSQGQ+L +VG+FL RP F+HGQLY
Sbjct: 1219 VLIPRLKLAPSDTKLPFRMRRTQLPLAVCFAMTINKSQGQSLKRVGIFLLRPCFSHGQLY 1278

Query: 186  VALSRVRSRKGLKL 199
            VA+SRV S+  LK+
Sbjct: 1279 VAISRVTSKTRLKI 1292


>At2g05080 putative helicase
          Length = 1219

 Score =  178 bits (451), Expect = 2e-45
 Identities = 97/207 (46%), Positives = 129/207 (61%), Gaps = 15/207 (7%)

Query: 6    FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
            FFQ+RAIL PT E V  +N  ML  +   E  +LSSDS   +D  S       T EF N+
Sbjct: 995  FFQERAILCPTNEDVNQINETMLDNLQGEELTFLSSDSLDTADIGSRNNPV-LTPEFLNN 1053

Query: 66   TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
             K  G+ NH+L LK+G+P+MLLRNID    L NGTRL + ++    + A ++TG      
Sbjct: 1054 VKVLGLSNHKLRLKIGSPVMLLRNIDPIGGLMNGTRLQIMQMSPFILQAMILTGDR---- 1109

Query: 126  VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
                      +D+K P + R  Q P+A+CFAMTINKSQGQ+L +VG+FLPRP F+H QLY
Sbjct: 1110 ----------ADTKLPFRMRRTQLPLAVCFAMTINKSQGQSLKRVGIFLPRPCFSHSQLY 1159

Query: 186  VALSRVRSRKGLKLCILDEAGKQQTST 212
            VA+SRV S+ GLK+ I+++ GK Q  T
Sbjct: 1160 VAISRVTSKSGLKILIVNDEGKPQKQT 1186


>At3g51700 unknown protein
          Length = 344

 Score =  173 bits (439), Expect = 6e-44
 Identities = 98/221 (44%), Positives = 137/221 (61%), Gaps = 2/221 (0%)

Query: 2   YTYQFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTE 61
           Y   F+Q+RAIL  T +  + +N YML  +   E +   +D+   +      K+  +  E
Sbjct: 113 YNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKM-LYPLE 171

Query: 62  FSNDTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTN 121
           F N  K  G P+ +L LKVG P+MLLR++     L  GTRL +  +    + A +ITG N
Sbjct: 172 FLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVETFVLEAMIITGNN 231

Query: 122 VNDKVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTH 181
             +KV I R+   L ++KFPIK R RQFP+ + FAMTI++SQ QTLS+VG++LPR +  H
Sbjct: 232 HGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLSKVGIYLPRQLLFH 291

Query: 182 GQLYVALSRVRSRKGLKLCILDEAGK-QQTSTVNVVFKEVF 221
           GQ YVA+S+V+SR GLK+ I D+ GK  Q  T NVVFKE+F
Sbjct: 292 GQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNVVFKELF 332


>At5g28780 putative protein
          Length = 337

 Score =  166 bits (420), Expect = 9e-42
 Identities = 92/220 (41%), Positives = 128/220 (57%), Gaps = 2/220 (0%)

Query: 4   YQFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFS 63
           +Q+  +R IL P  E V+ +N YML  +     EYLSS S  ++D         +  ++ 
Sbjct: 112 FQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYLSSYSIGKADTIGADYEALYHVKYL 171

Query: 64  NDTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVN 123
           N  +   +P H++ LK G PIM +RN +Q   LCNGTRLIV  LGE+ I A ++TGT+  
Sbjct: 172 NSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNGTRLIVTNLGEQVIEAQIVTGTHAG 231

Query: 124 DKVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQ 183
             V I R  L    S+ P   R +QFP+ +C+AMTI K+QGQ+L    L+LP PVF+H Q
Sbjct: 232 KMVSIPRFILSPPQSEHPFTLRRQQFPMRVCYAMTIIKNQGQSLKSDVLYLPNPVFSHVQ 291

Query: 184 LYVALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
           LYVALSRV S  G  L IL    ++     N+V+KE + +
Sbjct: 292 LYVALSRVTSPIG--LTILHGDDQKNDEVKNIVYKEFYND 329


>At2g14300 pseudogene; similar to  MURA transposase of maize Mutator
            transposon
          Length = 1230

 Score =  156 bits (394), Expect = 9e-39
 Identities = 83/178 (46%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 5    QFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSN 64
            +FFQ +AIL PT + V  +N +ML  +   E  Y SS+S   SD  ++ K   +T +F N
Sbjct: 1054 KFFQHKAILCPTNDDVNSINDHMLSKLTGEERIYRSSNSIDPSDTRAD-KNPIYTPDFLN 1112

Query: 65   DTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVND 124
              K SG+ NH L LKVG P+MLLRN      L NGTRL +  LG++ +   ++TGT V  
Sbjct: 1113 KIKISGLANHLLRLKVGCPVMLLRNFYPHGGLMNGTRLQIVRLGDKLVQGRILTGTRVGK 1172

Query: 125  KVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHG 182
             V I RM L  SD + P K + R FP+++ FAMTINKSQGQ+L  VG++LP+ VF+HG
Sbjct: 1173 LVIIPRMSLTPSDRRLPFKMKRRHFPLSVAFAMTINKSQGQSLGNVGMYLPKAVFSHG 1230


>At5g32630 putative protein
          Length = 856

 Score =  154 bits (388), Expect = 5e-38
 Identities = 80/153 (52%), Positives = 106/153 (68%), Gaps = 7/153 (4%)

Query: 71  MPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDKVHILR 130
           +P   L+ + G PI       +A SLCNGTRL + ++ ++ + A VITG  + D + I  
Sbjct: 709 IPEELLITEAGNPI-------EATSLCNGTRLHITQIAKQVVQAKVITGDIIGDIILIPL 761

Query: 131 MDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLYVALSR 190
           ++L  SD+K P K R RQFP++  FAMTINKSQGQ+L Q GL+LP+ VF+HGQLYVALSR
Sbjct: 762 INLTPSDTKLPFKMRRRQFPLSDAFAMTINKSQGQSLEQAGLYLPKLVFSHGQLYVALSR 821

Query: 191 VRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
           V S+ GLK+ ILD+ G  Q  T NVVFKE+F+N
Sbjct: 822 VTSKSGLKILILDKDGDIQKQTTNVVFKELFQN 854


>At4g03690 hypothetical protein
          Length = 570

 Score =  149 bits (376), Expect = 1e-36
 Identities = 87/218 (39%), Positives = 116/218 (52%), Gaps = 51/218 (23%)

Query: 6   FFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFSND 65
           FFQDRAIL PT + V ++N +ML  +                                  
Sbjct: 402 FFQDRAILCPTNDDVNLINDHMLSKLT--------------------------------- 428

Query: 66  TKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDK 125
                             IMLLRN+D    L NGTRL +  LG++ +    +TGT V   
Sbjct: 429 ------------------IMLLRNLDLHGGLMNGTRLQIVRLGDKLVQGRPLTGTRVGKL 470

Query: 126 VHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLY 185
           V IL M L  S  + P K R +QFP+++ FAM INKSQ Q+L+ VG+ L +PVF+HGQLY
Sbjct: 471 VLILMMPLTPSAHRLPFKMRRKQFPLSVAFAMMINKSQRQSLANVGINLLKPVFSHGQLY 530

Query: 186 VALSRVRSRKGLKLCILDEAGKQQTSTVNVVFKEVFEN 223
           VA+SRV+S+  LK+ I D  GKQ+  T NV+FKE+F+N
Sbjct: 531 VAMSRVKSKARLKVLITDSKGKQKKETTNVIFKEIFQN 568


>At3g43350 putative protein
          Length = 830

 Score =  140 bits (353), Expect = 5e-34
 Identities = 85/191 (44%), Positives = 105/191 (54%), Gaps = 36/191 (18%)

Query: 4   YQFFQDRAILAPTLEAVEMLNTYMLGMIAAPEHEYLSSDSALRSDEDSEIKVEWFTTEFS 63
           Y  +Q RAIL PT E V  +N +M+ M+   E  YLSSDS   +D  S     +   +F 
Sbjct: 438 YPQYQGRAILCPTNEDVNSINEHMMRMLDGEERIYLSSDSIDPADISSANNAAYLA-DFL 496

Query: 64  NDTKSSGMPNHQLLLKVGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVN 123
           N+ +  G+PNH L LKVG P+MLLRN+D    LCNGTRL V ++ +  I A  IT     
Sbjct: 497 NNVRVYGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGTRLQVTQMTDTIIQARFIT----- 551

Query: 124 DKVHILRMDLVLSDSKFPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQ 183
                                          FAMTINKSQGQTL  VGL+LPRPVF+HGQ
Sbjct: 552 ------------------------------AFAMTINKSQGQTLESVGLYLPRPVFSHGQ 581

Query: 184 LYVALSRVRSR 194
           LYVA+SRV S+
Sbjct: 582 LYVAISRVTSK 592



 Score =  134 bits (336), Expect = 5e-32
 Identities = 68/119 (57%), Positives = 84/119 (70%)

Query: 80  VGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDKVHILRMDLVLSDSK 139
           VG P+MLLRN+D    LCNGTRL V ++ +  I A  ITG  V   V I RM +   D++
Sbjct: 710 VGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPLDTR 769

Query: 140 FPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLYVALSRVRSRKGLK 198
            P K R +QF +++ FAMTINKSQGQTL  VGL+LPRPVF+HGQLYVA+SRV S+ G K
Sbjct: 770 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 828



 Score =  132 bits (332), Expect = 1e-31
 Identities = 66/115 (57%), Positives = 83/115 (71%)

Query: 80  VGTPIMLLRNIDQAASLCNGTRLIVDELGERFIGATVITGTNVNDKVHILRMDLVLSDSK 139
           +G P+MLLRN+D    LCNGTRL V ++ +  I A  ITG  V   V I RM +  SD++
Sbjct: 594 IGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTR 653

Query: 140 FPIKFRIRQFPIAICFAMTINKSQGQTLSQVGLFLPRPVFTHGQLYVALSRVRSR 194
            P K R +QF +++ FAMTINKSQGQTL  VGL+LPRPVF+HGQLYVA+SRV S+
Sbjct: 654 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSK 708


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.137    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,440,337
Number of Sequences: 26719
Number of extensions: 169632
Number of successful extensions: 414
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 353
Number of HSP's gapped (non-prelim): 36
length of query: 223
length of database: 11,318,596
effective HSP length: 96
effective length of query: 127
effective length of database: 8,753,572
effective search space: 1111703644
effective search space used: 1111703644
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)