BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0226.8
         (518 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g80350 CAD ATPase (AAA1)                                           865  0.0
At2g34560 katanin like protein                                        286  2e-77
At2g27600 putative AAA-type ATPase                                    263  1e-70
At3g27120 spastin protein, putative                                   259  3e-69
At3g19740 ATPase, putative                                            223  2e-58
At4g02470                                                             221  6e-58
At4g28000 putative protein                                            218  6e-57
At1g64110 unknown protein                                             217  1e-56
At1g50140 hypothetical protein, 5' partial                            216  3e-56
At4g24850 unknown protein (At4g24850)                                 204  1e-52
At1g02890 hypothetical protein                                        201  1e-51
At5g03340 transitional endoplasmic reticulum ATPase                   196  3e-50
At3g53230 CDC48 - like protein                                        194  8e-50
At3g09840 putative transitional endoplasmic reticulum ATPase          193  2e-49
At3g56690 calmodulin-binding protein                                  179  3e-45
At4g27680 unknown protein                                             179  4e-45
At2g45500 hypothetical protein                                        176  4e-44
At5g53540 26S proteasome regulatory particle chain RPT6-like pro...   166  2e-41
At1g62130 hypothetical protein                                        166  3e-41
At1g03000 putative peroxisome assembly factor-2                       164  1e-40

>At1g80350 CAD ATPase (AAA1)
          Length = 523

 Score =  865 bits (2234), Expect = 0.0
 Identities = 437/524 (83%), Positives = 468/524 (88%), Gaps = 7/524 (1%)

Query: 1   MVGSS--LGGLQEHLKLAREYALEGQYDTSIIFFDGAVAQINKHLNSLDDPLLRSKWMNV 58
           MVGSS  L GLQ+HLKLAREYALEG YDTS+IFFDGA+AQINKHLN+LDDPL R+KWMNV
Sbjct: 1   MVGSSNSLAGLQDHLKLAREYALEGSYDTSVIFFDGAIAQINKHLNTLDDPLARTKWMNV 60

Query: 59  KKALSEETEVVKQLDAERSAFKNNPIGRRPPSPPISTKSSFVFQPLDEYPTSSSG-PMDD 117
           KKA+ EETEVVKQLDAER AFK  P GRR  SPPI+TKSSFVFQPLDEYPTSS G PMDD
Sbjct: 61  KKAIMEETEVVKQLDAERRAFKEAPTGRRAASPPINTKSSFVFQPLDEYPTSSGGGPMDD 120

Query: 118 PDVWRPPSRD-TSRRPTRPGQMSTRKS--DGAWARGATPRGGATGRGAKAGATSKVNTGT 174
           PDVWRPP+RD TSRRP R GQ  TRKS  DGAWARG T R G   RG + GATSK   G 
Sbjct: 121 PDVWRPPTRDVTSRRPARAGQTGTRKSPQDGAWARGPTTRTGPASRGGRGGATSKSTAGA 180

Query: 175 RASTTGKKSGVSGKAGKTDSVISDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWE 234
           R+ST GKK G + K+ K +S+  DAE+ KSK+  YEGPD +LA MLERDVL+++PGVRW+
Sbjct: 181 RSSTAGKK-GAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLAAMLERDVLDSTPGVRWD 239

Query: 235 DVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 294
           DVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT
Sbjct: 240 DVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTT 299

Query: 295 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRV 354
           FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRG SGEHESSRRV
Sbjct: 300 FFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRV 359

Query: 355 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRK 414
           KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLP+FESRK
Sbjct: 360 KSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRK 419

Query: 415 ELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNM 474
            LI INL+TVEVA DVNI++VARRT+GYSGDDLTNVCRDAS+NGMRRKIAGKTRDEIKNM
Sbjct: 420 ALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNM 479

Query: 475 SKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGSA 518
           SKDDIS DPVAMCDFEEA+ KVQ SVS +DIE+HEKW  EFGSA
Sbjct: 480 SKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFGSA 523


>At2g34560 katanin like protein
          Length = 384

 Score =  286 bits (731), Expect = 2e-77
 Identities = 148/354 (41%), Positives = 226/354 (63%), Gaps = 16/354 (4%)

Query: 171 NTGTRASTTGKKSGVSGKAGKTDSVISDAEESKSKKSQY----EGPDPELAEMLERDVLE 226
           + G         S V+ + G T     +    K KKS +          LAE L RD++ 
Sbjct: 36  SNGNNGDVNNNSSPVTNQDGNTALANGNVIREKPKKSMFPPFESAETRTLAESLSRDIIR 95

Query: 227 TSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKA 286
            +P ++WE + GL  AK+LL+EAVV+P+  P YF G+  PWKG+L+FGPPGTGKT+LAKA
Sbjct: 96  GNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKA 155

Query: 287 VATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASG 346
           VATEC TTFFN+S++++ SKWRG+SE+++R LFDLAR +APSTIF+DEID++ + RG  G
Sbjct: 156 VATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEG 215

Query: 347 --EHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIY 404
             EHE+SRR+K+ELL+Q+DG+  T        ++V VLAATN PW++D A+ RRLEKRI 
Sbjct: 216 RSEHEASRRLKTELLIQMDGLQKT-------NELVFVLAATNLPWELDAAMLRRLEKRIL 268

Query: 405 IPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIA 464
           +PLP+ E+R+ +  + + +      +  D +  +++GYSG D+  +C++A++  +RR +A
Sbjct: 269 VPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLA 328

Query: 465 GKTRDEIKNMSKDDISK-DPVAMCDFEEALVKVQRSVSQADIERHEKWFHEFGS 517
               D    + +D++ K  P+   D + AL   + S +      ++K+  ++GS
Sbjct: 329 -ILEDREDVVPEDELPKIGPILPEDIDRALSNTRPS-AHLHAHLYDKFNDDYGS 380


>At2g27600 putative AAA-type ATPase
          Length = 435

 Score =  263 bits (673), Expect = 1e-70
 Identities = 141/364 (38%), Positives = 226/364 (61%), Gaps = 38/364 (10%)

Query: 184 GVSGKAGKTDSVISDAEESKSKKSQ---YEGPDPELAEM---LERDVLETSPGVRWEDVA 237
           G SG     D+ ++   ++K K  +    +G DPE +++   L   ++   P ++W DVA
Sbjct: 76  GGSGPGSNGDAAVATRPKTKPKDGEGGGKDGEDPEQSKLRAGLNSAIVREKPNIKWSDVA 135

Query: 238 GLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
           GL  AK+ L+EAV+LP+  P++F G RRPW+  L++GPPGTGK+ LAKAVATE  +TFF+
Sbjct: 136 GLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFS 195

Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
           VSS+ L SKW GESE++V  LF++AR  APS IF+DEIDSLC +RG   E E+SRR+K+E
Sbjct: 196 VSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESEASRRIKTE 255

Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
           LLVQ+ GV +       + + V+VLAATN P+ +D+A+RRR +KRIYIPLP  ++R+ + 
Sbjct: 256 LLVQMQGVGH-------NDEKVLVLAATNTPYALDQAIRRRFDKRIYIPLPEAKARQHMF 308

Query: 418 RINL-KTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRR--------------- 461
           +++L  T     + + + + ++T+G+SG D++   +D     +R+               
Sbjct: 309 KVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVKDVLFEPVRKTQDAMFFFKSPDGTW 368

Query: 462 -----KIAGKTRDEIKNMS----KDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWF 512
                +  G  +  +++++     + I   P+   DFE+ L + + +VS++D++ HE++ 
Sbjct: 369 MPCGPRHPGAIQTTMQDLATKGLAEKIIPPPITRTDFEKVLARQRPTVSKSDLDVHERFT 428

Query: 513 HEFG 516
            EFG
Sbjct: 429 QEFG 432


>At3g27120 spastin protein, putative
          Length = 327

 Score =  259 bits (662), Expect = 3e-69
 Identities = 133/307 (43%), Positives = 208/307 (67%), Gaps = 13/307 (4%)

Query: 213 DPELAEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLM 272
           +P L E +  ++++  P VRW+D+AGL  AK+ + E V+ PL  P+ F+G R P KG+L+
Sbjct: 29  EPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLL 88

Query: 273 FGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFI 332
           FGPPGTGKT++ KA+A E   TFF +S+++L SKW GE E++VR LF +A    P+ IF+
Sbjct: 89  FGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFV 148

Query: 333 DEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDID 392
           DEIDSL + R + GEHESSRR+K++ L++++G       + GS +I+++  ATN P ++D
Sbjct: 149 DEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGF------DSGSEQILLI-GATNRPQELD 201

Query: 393 EALRRRLEKRIYIPLPNFESRKELIRINLKT--VEVAPDVNIDEVARRTDGYSGDDLTNV 450
           EA RRRL KR+YIPLP+ E+R  +I+  LK   +    D +++ +   T+GYSG D+ N+
Sbjct: 202 EAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNL 261

Query: 451 CRDASLNGMRRKIAGKTRDEIKNMSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEK 510
            +DA++  +R  +  K   +I N++KDD+    V + DF++AL +V+ SVSQ ++  +E 
Sbjct: 262 VKDATMGPLREAL--KRGIDITNLTKDDMRL--VTLQDFKDALQEVRPSVSQNELGIYEN 317

Query: 511 WFHEFGS 517
           W ++FGS
Sbjct: 318 WNNQFGS 324


>At3g19740 ATPase, putative
          Length = 439

 Score =  223 bits (568), Expect = 2e-58
 Identities = 115/291 (39%), Positives = 185/291 (63%), Gaps = 13/291 (4%)

Query: 230 GVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAV 287
           GV+++D+  L   K+ L E V+LP+  PE F    + RP KG+L+FGPPGTGKTLLAKA+
Sbjct: 146 GVKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKAL 205

Query: 288 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGE 347
           ATE G  F +++ +TL SKW G++E++ + LF  A   AP  IF+DE+DSL  +RG + E
Sbjct: 206 ATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFE 265

Query: 348 HESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPL 407
           HE++RR+++E +   DG+     ++D  R  +++L ATN P+D+D+A+ RRL +RIY+ L
Sbjct: 266 HEATRRMRNEFMAAWDGL----RSKDSQR--ILILGATNRPFDLDDAVIRRLPRRIYVDL 319

Query: 408 PNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKT 467
           P+ E+R ++++I L    +      D++A+ T+GYSG DL N+C  A+   ++  +  + 
Sbjct: 320 PDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEEN 379

Query: 468 RDEIKNMSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHE--KWFHEFG 516
           +D + N S D     P+++ DF ++  KV  SV+      +E  KW  ++G
Sbjct: 380 KDSVTNASPD---LRPLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 427


>At4g02470
          Length = 371

 Score =  221 bits (564), Expect = 6e-58
 Identities = 131/332 (39%), Positives = 197/332 (58%), Gaps = 23/332 (6%)

Query: 201 ESKSKKSQYEG--PDPELAEMLERDVLETSP-GVRWEDVAGLTEAKRLLEEAVVLPLWMP 257
           E+KS K   +    + E  + L  DV+  S  GV ++D+  L   K  L+E V+LPL  P
Sbjct: 33  ENKSLKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFDDIGALENVKETLKELVMLPLQRP 92

Query: 258 EYFQG--IRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMV 315
           E F    + +P KG+L+FGPPGTGKT+LAKAVATE G  F N+S +++ SKW GE E+ V
Sbjct: 93  ELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYV 152

Query: 316 RCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGS 375
           + +F LA   APS IF+DE+DS+   R   GEHE+ R++K+E +V  DG+          
Sbjct: 153 KAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK------D 206

Query: 376 RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEV 435
           R+ V+VLAATN P+D+DEA+ RRL +R+ + LP+  +R +++ + L   E+APDV+++ +
Sbjct: 207 RERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAI 266

Query: 436 ARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDISKDPVAMC-------- 487
           A  TDGYSG DL N+C  A+ +   R+I  K + E      ++    P+  C        
Sbjct: 267 ANMTDGYSGSDLKNLCVTAA-HFPIREILEKEKKEKTAAQAENRPTPPLYSCTDVRSLTM 325

Query: 488 -DFEEALVKVQRSVS--QADIERHEKWFHEFG 516
            DF+ A  +V  SVS   +++   ++W   +G
Sbjct: 326 NDFKAAHDQVCASVSSDSSNMNELQQWNELYG 357


>At4g28000 putative protein
          Length = 726

 Score =  218 bits (555), Expect = 6e-57
 Identities = 115/278 (41%), Positives = 178/278 (63%), Gaps = 9/278 (3%)

Query: 207 SQYEGPDPELAEMLERDVLETSP-GVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQG-IR 264
           S+   PD E  + +  +V+  +  GV + D+  L E K  L+E V+LPL  P+ F+G + 
Sbjct: 386 SKEVAPDNEFEKRIRPEVIPANEIGVTFADIGSLDETKESLQELVMLPLRRPDLFKGGLL 445

Query: 265 RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARA 324
           +P +G+L+FGPPGTGKT++AKA+A E G +F NVS +T+ SKW GE E+ VR LF LA  
Sbjct: 446 KPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAK 505

Query: 325 YAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAA 384
            +P+ IF+DE+DS+   R   GEHE+ R++K+E +   DG+ + A    G R  ++VLAA
Sbjct: 506 VSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNA----GDR--ILVLAA 559

Query: 385 TNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSG 444
           TN P+D+DEA+ RR E+RI + LP+ ESR++++R  L + E   +++  E+A+ TDGYSG
Sbjct: 560 TNRPFDLDEAIIRRFERRIMVGLPSVESREKILR-TLLSKEKTENLDFQELAQMTDGYSG 618

Query: 445 DDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDISKD 482
            DL N C  A+   +R  I  +   + +   +++  K+
Sbjct: 619 SDLKNFCTTAAYRPVRELIKQECLKDQERRKREEAEKN 656


>At1g64110 unknown protein
          Length = 824

 Score =  217 bits (553), Expect = 1e-56
 Identities = 140/387 (36%), Positives = 217/387 (55%), Gaps = 36/387 (9%)

Query: 160 RGAKAGATSKVNTGTRASTTGKKSGVSGKAG-KTDSV--ISDAEESKSK--------KSQ 208
           R  KAG   K+   T+  ++ +    S K   KT+SV  +S  EE + +        K+ 
Sbjct: 430 REGKAGGREKLKQKTKEESSKEVKAESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAP 489

Query: 209 YEGPDPELAEMLERDVLETSP-GVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQG-IRRP 266
              PD E  + +  +V+      V ++D+  L E K  L+E V+LPL  P+ F G + +P
Sbjct: 490 EVAPDNEFEKRIRPEVIPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKP 549

Query: 267 WKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYA 326
            +G+L+FGPPGTGKT+LAKA+A E G +F NVS +T+ SKW GE E+ VR LF LA   +
Sbjct: 550 CRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVS 609

Query: 327 PSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATN 386
           P+ IF+DE+DS+   R   GEHE+ R++K+E +   DG+      + G R  ++VLAATN
Sbjct: 610 PTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGL----MTKPGER--ILVLAATN 663

Query: 387 FPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDD 446
            P+D+DEA+ RR E+RI + LP  E+R++++R  L   +V  +++  E+A  T+GY+G D
Sbjct: 664 RPFDLDEAIIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSD 723

Query: 447 LTNVCRDASLNGMRRKI---------AGKTRDEIKNMSKDD------ISKDPVAMCDFEE 491
           L N+C  A+   +R  I           K R+  K   +D+      I+  P+   DF+E
Sbjct: 724 LKNLCTTAAYRPVRELIQQERIKDTEKKKQREPTKAGEEDEGKEERVITLRPLNRQDFKE 783

Query: 492 ALVKVQRSVSQ--ADIERHEKWFHEFG 516
           A  +V  S +   A +   ++W   +G
Sbjct: 784 AKNQVAASFAAEGAGMGELKQWNELYG 810


>At1g50140 hypothetical protein, 5' partial
          Length = 601

 Score =  216 bits (549), Expect = 3e-56
 Identities = 115/291 (39%), Positives = 183/291 (62%), Gaps = 13/291 (4%)

Query: 230 GVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAV 287
           GV++ED+  L + K+ L E V+LP+  PE F    + RP KG+L+FGPPGTGKTLLAKA+
Sbjct: 308 GVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKAL 367

Query: 288 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGE 347
           ATE G  F +++ +TL SKW G++E++ + LF  A   AP  IF+DEIDSL  +RG S E
Sbjct: 368 ATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSE 427

Query: 348 HESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPL 407
           HE++RR+++E +   DG+     ++D  R  +++L ATN P+D+D+A+ RRL +RIY+ L
Sbjct: 428 HEATRRMRNEFMAAWDGL----RSKDSQR--ILILGATNRPFDLDDAVIRRLPRRIYVDL 481

Query: 408 PNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKT 467
           P+ E+R ++++I L    +  D   +++A+ T+GYSG DL N+C  A+   ++  +  + 
Sbjct: 482 PDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAYRPVQELLQEEQ 541

Query: 468 RDEIKNMSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHE--KWFHEFG 516
           +      S    S   +++ DF ++  KV  SV+      +E  KW  ++G
Sbjct: 542 KGARAEASPGLRS---LSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQYG 589


>At4g24850 unknown protein (At4g24850)
          Length = 442

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/315 (37%), Positives = 188/315 (59%), Gaps = 16/315 (5%)

Query: 197 SDAEESKSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWM 256
           +D + S S K      +     +L   +L +   V ++D+  L + K +L+E V+LPL  
Sbjct: 103 NDLKGSTSSKKDIVVENVFEKRLLSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQR 162

Query: 257 PEYF--QGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERM 314
           PE F    + +P KG+L+FGPPGTGKT+LAKAVA E    F N+S +++ SKW GE E+ 
Sbjct: 163 PELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKY 222

Query: 315 VRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDG 374
           V+ +F LA   +PS IF+DE+DS+   R    EHE+SR++K+E ++  DG++        
Sbjct: 223 VKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQ------ 276

Query: 375 SRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDE 434
            R+ V+VLAATN P+D+DEA+ RRL +R+ + LP+  +R  ++++ L   +++PD++I E
Sbjct: 277 ERERVLVLAATNRPFDLDEAVIRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGE 336

Query: 435 VARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDI------SKDPVAMC- 487
           +A  T+GYSG DL N+C  A+   ++  +  + R+    +++  +      S D  A+  
Sbjct: 337 IASMTNGYSGSDLKNLCVTAAHRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNV 396

Query: 488 -DFEEALVKVQRSVS 501
            DF +A   V  SVS
Sbjct: 397 EDFRDAHKWVSASVS 411


>At1g02890 hypothetical protein
          Length = 1240

 Score =  201 bits (510), Expect = 1e-51
 Identities = 126/331 (38%), Positives = 194/331 (58%), Gaps = 25/331 (7%)

Query: 201  ESKSKKSQYEG--PDPELAEMLERDVLETSP-GVRWEDVAGLTEAKRLLEEAVVLPLWMP 257
            E+KS K   +    + E  + L  DV+  S  GV + D+  L   K  L+E V+LPL  P
Sbjct: 906  ENKSTKKSLKDVVTENEFEKKLLSDVIPPSDIGVSFSDIGALENVKDTLKELVMLPLQRP 965

Query: 258  EYFQG--IRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMV 315
            E F    + +P KG+L+FGPPGTGKT+LAKAVATE G  F N+S +++ SK     E+ V
Sbjct: 966  ELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK----GEKYV 1021

Query: 316  RCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGS 375
            + +F LA   APS IF+DE+DS+   R   GEHE+ R++K+E ++  DG+          
Sbjct: 1022 KAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTK------D 1075

Query: 376  RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEV 435
            ++ V+VLAATN P+D+DEA+ RRL +R+ + LP+  +R +++ + L   E+A DV+++ +
Sbjct: 1076 KERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAI 1135

Query: 436  ARRTDGYSGDDLTNVCRDASLNGMR------RKIAGKTRDEIKNMSKDDISKD--PVAMC 487
            A  TDGYSG DL N+C  A+   +R      +K     + E + M +   S D  P+ M 
Sbjct: 1136 ANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKERSVAQAENRAMPQLYSSTDVRPLNMN 1195

Query: 488  DFEEALVKVQRSVS--QADIERHEKWFHEFG 516
            DF+ A  +V  SV+   +++   ++W   +G
Sbjct: 1196 DFKTAHDQVCASVASDSSNMNELQQWNELYG 1226


>At5g03340 transitional endoplasmic reticulum ATPase
          Length = 810

 Score =  196 bits (498), Expect = 3e-50
 Identities = 118/303 (38%), Positives = 173/303 (56%), Gaps = 25/303 (8%)

Query: 222 RDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGI-RRPWKGVLMFGPPGTGK 280
           R+ +   P V WED+ GL   KR L+E V  P+  PE F+     P KGVL +GPPG GK
Sbjct: 468 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527

Query: 281 TLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN 340
           TLLAKA+A EC   F +V    L + W GESE  VR +FD AR  AP  +F DE+DS+  
Sbjct: 528 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 587

Query: 341 SRG--ASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR- 397
            RG  A     ++ RV ++LL ++DG++        ++K V ++ ATN P  ID AL R 
Sbjct: 588 QRGNSAGDAGGAADRVLNQLLTEMDGMN--------AKKTVFIIGATNRPDIIDSALLRP 639

Query: 398 -RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASL 456
            RL++ IYIPLP+ +SR  + +  L+   VA DV++  +A+ T G+SG D+T +C+ A  
Sbjct: 640 GRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACK 699

Query: 457 NGMRRKIAGKTRDEIK----------NMSKDDISKDPVAMCDFEEALVKVQRSVSQADIE 506
             +R  I     +E +          +M  D++S+  +    FEE++   +RSVS ADI 
Sbjct: 700 YAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSE--IRAAHFEESMKYARRSVSDADIR 757

Query: 507 RHE 509
           +++
Sbjct: 758 KYQ 760



 Score =  168 bits (426), Expect = 6e-42
 Identities = 104/258 (40%), Positives = 156/258 (60%), Gaps = 15/258 (5%)

Query: 212 PDPEL---AEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIR-RPW 267
           PD E+    E ++R+  E    V ++DV G+ +    + E V LPL  P+ F+ I  +P 
Sbjct: 182 PDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 241

Query: 268 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 327
           KG+L++GPPG+GKTL+A+AVA E G  FF ++   + SK  GESE  +R  F+ A   AP
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301

Query: 328 STIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNF 387
           S IFIDEIDS+   R  +   E  RR+ S+LL  +DG+         SR  V+V+ ATN 
Sbjct: 302 SIIFIDEIDSIAPKREKT-NGEVERRIVSQLLTLMDGLK--------SRAHVIVMGATNR 352

Query: 388 PWDIDEALRR--RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGD 445
           P  ID ALRR  R ++ I I +P+   R E++RI+ K +++A DV+++ +++ T GY G 
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGA 412

Query: 446 DLTNVCRDASLNGMRRKI 463
           DL  +C +A+L  +R K+
Sbjct: 413 DLAALCTEAALQCIREKM 430


>At3g53230 CDC48 - like protein
          Length = 815

 Score =  194 bits (494), Expect = 8e-50
 Identities = 117/299 (39%), Positives = 170/299 (56%), Gaps = 19/299 (6%)

Query: 222 RDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGI-RRPWKGVLMFGPPGTGK 280
           R+ +   P V WED+ GL   KR L+E V  P+  PE F+     P KGVL +GPPG GK
Sbjct: 469 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528

Query: 281 TLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN 340
           TLLAKA+A EC   F ++    L + W GESE  VR +FD AR  AP  +F DE+DS+  
Sbjct: 529 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588

Query: 341 SRGAS--GEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR- 397
            RG S      ++ RV ++LL ++DG++        ++K V ++ ATN P  ID AL R 
Sbjct: 589 QRGNSVGDAGGAADRVLNQLLTEMDGMN--------AKKTVFIIGATNRPDIIDPALLRP 640

Query: 398 -RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASL 456
            RL++ IYIPLP+ ESR ++ +  L+   VA DV++  +A+ T G+SG D+T +C+ +  
Sbjct: 641 GRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCK 700

Query: 457 NGMRRKIAGKTRDEIKN------MSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHE 509
             +R  I      E K       M +D+     +    FEE++   +RSVS ADI +++
Sbjct: 701 YAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQ 759



 Score =  169 bits (428), Expect = 3e-42
 Identities = 105/258 (40%), Positives = 156/258 (59%), Gaps = 15/258 (5%)

Query: 212 PDPEL---AEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIR-RPW 267
           PD E+    E ++R+  E    V ++DV G+ +    + E V LPL  P+ F+ I  +P 
Sbjct: 183 PDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 242

Query: 268 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 327
           KG+L++GPPG+GKTL+A+AVA E G  FF ++   + SK  GESE  +R  F+ A   AP
Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302

Query: 328 STIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNF 387
           S IFIDEIDS+   R  +   E  RR+ S+LL  +DG+         SR  V+V+ ATN 
Sbjct: 303 SIIFIDEIDSIAPKREKT-HGEVERRIVSQLLTLMDGLK--------SRAHVIVMGATNR 353

Query: 388 PWDIDEALRR--RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGD 445
           P  ID ALRR  R ++ I I +P+   R E++RI+ K +++A DV+++ V++ T GY G 
Sbjct: 354 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGA 413

Query: 446 DLTNVCRDASLNGMRRKI 463
           DL  +C +A+L  +R K+
Sbjct: 414 DLAALCTEAALQCIREKM 431


>At3g09840 putative transitional endoplasmic reticulum ATPase
          Length = 809

 Score =  193 bits (491), Expect = 2e-49
 Identities = 115/301 (38%), Positives = 169/301 (55%), Gaps = 21/301 (6%)

Query: 222 RDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGI-RRPWKGVLMFGPPGTGK 280
           R+ +   P V W D+ GL   KR L+E V  P+  PE F+     P KGVL +GPPG GK
Sbjct: 468 RETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527

Query: 281 TLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN 340
           TLLAKA+A EC   F +V    L + W GESE  VR +FD AR  AP  +F DE+DS+  
Sbjct: 528 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 587

Query: 341 SRGASGEHE---SSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR 397
            RG     +   ++ RV ++LL ++DG++        ++K V ++ ATN P  ID AL R
Sbjct: 588 QRGGGSGGDGGGAADRVLNQLLTEMDGMN--------AKKTVFIIGATNRPDIIDSALLR 639

Query: 398 --RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDAS 455
             RL++ IYIPLP+ +SR  + +  L+   +A DV+I  +A+ T G+SG D+T +C+ A 
Sbjct: 640 PGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRAC 699

Query: 456 LNGMRRKIAGKTRDEIKN------MSKDDISK-DPVAMCDFEEALVKVQRSVSQADIERH 508
              +R  I      E +       M +D + +   +    FEE++   +RSVS ADI ++
Sbjct: 700 KYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKY 759

Query: 509 E 509
           +
Sbjct: 760 Q 760



 Score =  169 bits (427), Expect = 4e-42
 Identities = 104/258 (40%), Positives = 156/258 (60%), Gaps = 15/258 (5%)

Query: 212 PDPEL---AEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIR-RPW 267
           PD E+    E ++R+  E    V ++DV G+ +    + E V LPL  P+ F+ I  +P 
Sbjct: 182 PDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 241

Query: 268 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 327
           KG+L++GPPG+GKTL+A+AVA E G  FF ++   + SK  GESE  +R  F+ A   AP
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301

Query: 328 STIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNF 387
           S IFIDEIDS+   R  +   E  RR+ S+LL  +DG+         SR  V+V+ ATN 
Sbjct: 302 SIIFIDEIDSIAPKREKT-NGEVERRIVSQLLTLMDGLK--------SRAHVIVMGATNR 352

Query: 388 PWDIDEALRR--RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGD 445
           P  ID ALRR  R ++ I I +P+   R E++RI+ K +++A DV+++ +++ T GY G 
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGA 412

Query: 446 DLTNVCRDASLNGMRRKI 463
           DL  +C +A+L  +R K+
Sbjct: 413 DLAALCTEAALQCIREKM 430


>At3g56690 calmodulin-binding protein
          Length = 1022

 Score =  179 bits (455), Expect = 3e-45
 Identities = 121/311 (38%), Positives = 174/311 (55%), Gaps = 24/311 (7%)

Query: 209 YEGPDPELAEMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGI-RRPW 267
           +E    ++     R+V+   P V WEDV G  E K  L EAV  P    + F+ I  RP 
Sbjct: 699 FENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPP 758

Query: 268 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 327
            G+LMFGPPG  KTL+A+AVA+E    F  V    L SKW GESE+ VR LF  ARA AP
Sbjct: 759 SGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAP 818

Query: 328 STIFIDEIDSLCNSRGASGEHES-SRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATN 386
           S IF DEIDSL + RG   +  S S RV S+LLV++DG+          R  V V+AATN
Sbjct: 819 SIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLH--------QRVGVTVIAATN 870

Query: 387 FPWDIDEALRR--RLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSG 444
            P  ID AL R  R ++ +Y+  PN   R+ +++I+L+ +  + D+ + E+A  T GY+G
Sbjct: 871 RPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTG 930

Query: 445 DDLTNVCRDASLNGMRRKIAGKTRDEIKNMS----KDDISK-DPVAMCDFEEALVKVQRS 499
            D++ +CR+A++  +   +      E++ +S    K  IS+ +P  +  ++    K QR 
Sbjct: 931 ADISLICREAAIAALEESL------EMEEISMRHLKAAISQIEPTEILSYKALSEKFQRL 984

Query: 500 VSQADIERHEK 510
           V   D +R E+
Sbjct: 985 V-HTDPQREEE 994



 Score =  128 bits (321), Expect = 9e-30
 Identities = 81/224 (36%), Positives = 134/224 (59%), Gaps = 17/224 (7%)

Query: 265 RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARA 324
           RP KGVL+ GPPGTGKT LA+  A   G  FF+V+   + S++ GESE+ +  +F  A  
Sbjct: 416 RPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASN 475

Query: 325 YAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAA 384
             P+ +FID++D++  +R   GE E S+R+ + LL  +DG+S T    DG    V+V+AA
Sbjct: 476 ATPAVVFIDDLDAIAPARKEGGE-ELSQRMVATLLNLMDGISRT----DG----VVVIAA 526

Query: 385 TNFPWDIDEALRR--RLEKRIYIPLPNFESRKELIRINLKTVEVA-PDVNIDEVARRTDG 441
           TN P  I+ ALRR  RL++ I I +P+   R +++ I L+ +  +  ++ ++++A  T G
Sbjct: 527 TNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHG 586

Query: 442 YSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDISKDPVA 485
           + G DL+ +C +A+   +RR +     D+  + S   + + P+A
Sbjct: 587 FVGADLSALCCEAAFVCLRRHL-----DQSSSSSNLPLEEAPIA 625


>At4g27680 unknown protein
          Length = 398

 Score =  179 bits (453), Expect = 4e-45
 Identities = 105/302 (34%), Positives = 166/302 (54%), Gaps = 30/302 (9%)

Query: 215 ELAEMLERDVLETSP---------------GVRWEDVAGLTEAKRLLEEAVVLPLWMPEY 259
           E+++ L R +++T+P                V +  + GL   K+ L E V+LPL  PE 
Sbjct: 50  EISKRLGRPLVQTNPYEDVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPEL 109

Query: 260 FQ--GIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRC 317
           F    +  P KGVL++GPPGTGKT+LAKA+A E G  F NV  + L SKW G+++++V  
Sbjct: 110 FAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSA 169

Query: 318 LFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVDGVSNTATNEDGSRK 377
           +F LA    P+ IFIDE++S    R  S +HE+   +K+E +   DG S           
Sbjct: 170 VFSLAYKLQPAIIFIDEVESFLGQR-RSTDHEAMANMKTEFMALWDGFST------DPHA 222

Query: 378 IVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVAR 437
            VMVLAATN P ++DEA+ RRL +   I +P+   R E++++ LK   V PD++ D +AR
Sbjct: 223 RVMVLAATNRPSELDEAILRRLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIAR 282

Query: 438 RTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDDISKDPVAMCDFEEALVKVQ 497
             +GY+G D+  +C+ A+   +R  +      + +   K  +   P++  D E+ L   +
Sbjct: 283 LCEGYTGSDIFELCKKAAYFPIREIL------DAERKGKPCLDPRPLSQLDLEKVLATSK 336

Query: 498 RS 499
           ++
Sbjct: 337 KT 338


>At2g45500 hypothetical protein
          Length = 481

 Score =  176 bits (445), Expect = 4e-44
 Identities = 131/385 (34%), Positives = 193/385 (50%), Gaps = 70/385 (18%)

Query: 139 STRKSDGAWARGATPRGGATGRG--------AKAGATSKVNTGTR-ASTTGKKSGVSGKA 189
           S R+    W    + R  A G G        A   + S  +T +R   T  +K+ V+   
Sbjct: 111 SYREKISNWQNQVSERLQALGVGMSENKRTVAYPSSASVSSTASRYRKTLSQKTPVARGG 170

Query: 190 GKTDSVISDAEES-KSKKSQYEGPDPELAEMLERDVLETSPGVRWEDVAGLTEAKRLLEE 248
             T     DA  S K  K      D +L EM+   +++ SP V+W+DVAGL  AK+ L E
Sbjct: 171 VATPRNPKDAAASPKPVKESGNVYDDKLVEMINTTIVDRSPSVKWDDVAGLNGAKQALLE 230

Query: 249 AVVLPLWMPEYFQGIRRPWK-----GVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATL 303
            V+LP    + F G+RRP +     G+L+FGPPG GKT+LAKAVA+E   TFFNVS+++L
Sbjct: 231 MVILPAKRRDLFTGLRRPARVTSLLGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSL 290

Query: 304 ASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQVD 363
            SKW                           IDS+ ++R  S E+E+SRR+KSE L+Q D
Sbjct: 291 TSKW---------------------------IDSIMSTRSTS-ENEASRRLKSEFLIQFD 322

Query: 364 GVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLK- 422
           GV+   +N D    +V+++ ATN P ++D+A+ RRL KRIY+PLP+   RK L +  LK 
Sbjct: 323 GVT---SNPD---DLVIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKC 376

Query: 423 TVEVAPDVNIDEVARRTDG--------------------YSGDDLTNVCRDASLNGMRRK 462
                 D +ID++ + T+G                    YSG DL  +C +A++  +R  
Sbjct: 377 QPHSLSDGDIDKIVKETEGKLYRLCIKKHRFISQVTDKRYSGSDLQALCEEAAMMPIREL 436

Query: 463 IAGKTRDEIKNMSKDDISKDPVAMC 487
            A     +   +    +S+  V +C
Sbjct: 437 GANILTIQANKVLNFSVSQINVEVC 461


>At5g53540 26S proteasome regulatory particle chain RPT6-like
           protein
          Length = 403

 Score =  166 bits (421), Expect = 2e-41
 Identities = 96/271 (35%), Positives = 154/271 (56%), Gaps = 15/271 (5%)

Query: 231 VRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAVA 288
           V +  + GL   K+ L E V+LPL  PE F    +  P KGVL++GPPGTGKT+LAKA+A
Sbjct: 84  VEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIA 143

Query: 289 TECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEH 348
            E    F NV  + L SKW G+++++V  +F LA    P+ IFIDE+DS    R  S ++
Sbjct: 144 RESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQR-RSTDN 202

Query: 349 ESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLP 408
           E+   +K+E +   DG     T +  +R  VMVLAATN P ++DEA+ RR  +   I +P
Sbjct: 203 EAMSNMKTEFMALWDGF----TTDQNAR--VMVLAATNRPSELDEAILRRFPQSFEIGMP 256

Query: 409 NFESRKELIRINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTR 468
           + + R +++++ LK   V  D+N D +AR  + Y+G D+  +C+ A+   +R  +  +  
Sbjct: 257 DCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKE 316

Query: 469 DEIKNMSKDDISKDPVAMCDFEEALVKVQRS 499
            +  ++ +      P+   D E+ L   +++
Sbjct: 317 GKRVSVPR------PLTQLDLEKVLATSKKT 341


>At1g62130 hypothetical protein
          Length = 372

 Score =  166 bits (420), Expect = 3e-41
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 57/341 (16%)

Query: 201 ESKSKKSQYEGPDPELAEMLERDVLETSP-GVRWEDVAGLTEAKRLLEEAVVLPLWMPEY 259
           E +SKKS  +       E+   D++  S  GV ++D+  L   K  L+E V+LP   PE 
Sbjct: 50  EIESKKSLKDIVTENTFEI--SDIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPEL 107

Query: 260 F----------------------QGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFN 297
           F                          +P  G+L+FGP GTGKT+LAKAVATE G    N
Sbjct: 108 FCKGQLTKMLTLWIGGFLISLLLYFSTQPCNGILLFGPSGTGKTMLAKAVATEAGANLIN 167

Query: 298 VSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSE 357
           +S     S+W  E E+ V+ +F LA   +PS IF+DE++S+         H    + K+E
Sbjct: 168 MSM----SRWFSEGEKYVKAVFSLASKISPSIIFLDEVESML--------HRYRLKTKNE 215

Query: 358 LLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELI 417
            ++  DG+    TNE   ++ V+VLAATN P+D+DEA+ RRL  R+ + LP+  SR +++
Sbjct: 216 FIINWDGLR---TNE---KERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKIL 269

Query: 418 RINLKTVEVAPDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKD 477
           ++ L   +++PD +IDEVA  T+GYSG+DL    RDA++   R   AG    +++ +   
Sbjct: 270 KVILSKEDLSPDFDIDEVASMTNGYSGNDLKE--RDAAVAEGRVPPAGSGGSDLRVLK-- 325

Query: 478 DISKDPVAMCDFEEALVKVQRSVSQADIERH--EKWFHEFG 516
                   M DF  AL  V  S+S   +      +W  ++G
Sbjct: 326 --------MEDFRNALELVSMSISSKSVNMTALRQWNEDYG 358


>At1g03000 putative peroxisome assembly factor-2
          Length = 941

 Score =  164 bits (415), Expect = 1e-40
 Identities = 100/292 (34%), Positives = 169/292 (57%), Gaps = 13/292 (4%)

Query: 229 PGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVA 288
           P V+W+DV GL + K  + + V LPL   + F    R   GVL++GPPGTGKTLLAKAVA
Sbjct: 653 PNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 712

Query: 289 TECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEH 348
           TEC   F +V    L + + GESE+ VR +F+ AR+  P  IF DE+DSL  +RGASG+ 
Sbjct: 713 TECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDS 772

Query: 349 ES-SRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYI 405
                RV S++L ++DG+S+++ +       + ++ A+N P  ID AL R  R +K +Y+
Sbjct: 773 GGVMDRVVSQMLAEIDGLSDSSQD-------LFIIGASNRPDLIDPALLRPGRFDKLLYV 825

Query: 406 PL-PNFESRKELIRINLKTVEVAPDVNIDEVARRTDG-YSGDDLTNVCRDASLNGMRRKI 463
            +  +   R+ +++   +  +++ DV++  VA++    ++G D+  +C DA     +RK+
Sbjct: 826 GVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKV 885

Query: 464 AGKTRDEIKNMSKDDISKDPVAMCDFEEALVKVQRSVSQADIERHEKWFHEF 515
           +     ++    +DD     V   DF +A+ ++  S+S  +++++E    +F
Sbjct: 886 SKSDSGDMPT-EEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQF 936



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 54/210 (25%), Positives = 89/210 (41%), Gaps = 22/210 (10%)

Query: 270 VLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPST 329
           VL+ G PG GK  + K VA   G      S  +L +    ++   +   F++AR Y+P+ 
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTI 439

Query: 330 IFIDEID----------SLCNSRGASGEHESSRRVKSELLVQVDGV------SNTATNED 373
           + +   D          SL +  G S E  S  R  +E +   D        SN + NE 
Sbjct: 440 LLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDSSMEEKSNSNFSENEV 499

Query: 374 GSRK--IVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVN 431
           G  +   V+++A+      I   +RR     I +   N E R E++  +L+ V    +++
Sbjct: 500 GKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNIS 559

Query: 432 IDEVAR----RTDGYSGDDLTNVCRDASLN 457
            DE  +    +T G+   DL  +  DA  N
Sbjct: 560 SDEFMKGLVGQTSGFLPRDLQALVADAGAN 589


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.313    0.131    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,697,928
Number of Sequences: 26719
Number of extensions: 513145
Number of successful extensions: 2140
Number of sequences better than 10.0: 189
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1776
Number of HSP's gapped (non-prelim): 265
length of query: 518
length of database: 11,318,596
effective HSP length: 104
effective length of query: 414
effective length of database: 8,539,820
effective search space: 3535485480
effective search space used: 3535485480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)