BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0224.12
(426 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28300 predicted proline-rich protein 42 8e-04
At5g46070 putative protein 40 0.002
At1g23540 putative serine/threonine protein kinase 39 0.004
At1g07360 unknown protein 39 0.005
At1g24460 unknown protein 39 0.007
At3g13965 unknown protein 38 0.009
At4g02880 unknown protein 38 0.012
At4g02960 putative polyprotein of LTR transposon 37 0.016
At5g15450 clpB heat shock protein-like 37 0.027
At1g06530 hypothetical protein 35 0.060
At3g57070 unknown protein 35 0.079
At1g49490 hypothetical protein 35 0.079
At3g22380 hypothetical protein 35 0.10
At2g25050 hypothetical protein 35 0.10
At1g79280 hypothetical protein 35 0.10
At5g08450 unknown protein 34 0.13
At4g08400 extensin-like protein 34 0.13
At3g15190 30S ribosomal protein S20 34 0.13
At1g70140 hypothetical protein 34 0.13
At1g48620 unknown protein 34 0.13
>At4g28300 predicted proline-rich protein
Length = 496
Score = 41.6 bits (96), Expect = 8e-04
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 18/148 (12%)
Query: 79 PPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSR 138
PP +QN P+P S+ Q PP MPPP A S PSS
Sbjct: 243 PPTQLQNTPAPVPVSTPP------SQLQAPPAQSQ-----FMPPPPAP------SHPSSA 285
Query: 139 QLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERLSALLVEDPLSI 198
Q Q+ PQ Q P QP+ + + P ++ S S ++ + P
Sbjct: 286 QTQSFPQYQQNWPPQPQARPQSSGGYPTYSPAPPGNQPPVESLPSSMQMQSPYSGPPQQS 345
Query: 199 FQSF-FDGTLDLESPPRQAETTETAQSG 225
Q++ + ++PP+Q + + + Q+G
Sbjct: 346 MQAYGYGAAPPPQAPPQQTKMSYSPQTG 373
Score = 28.9 bits (63), Expect = 5.7
Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 20/177 (11%)
Query: 7 PRAMWFSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPY 66
P+ + PPP L ++ + + S+ + ++ P + F P A HP
Sbjct: 233 PQQHQYYMPPPPTQLQNTPAPVPVSTPP-SQLQAPPAQSQ----FMPPPPAPSHPSSAQ- 286
Query: 67 YTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKAD 126
T+ N+PPQ S S G +PP+ P +
Sbjct: 287 -TQSFPQYQQNWPPQPQARPQSSGGYPTYS----PAPPGNQPPVESL---------PSSM 332
Query: 127 VLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTS 183
+ S +S P + +Q P PQ P Q +++ S G S S + +
Sbjct: 333 QMQSPYSGPPQQSMQAYGYGAAPPPQAPPQQTKMSYSPQTGDGYLPSGPPPPSGYAN 389
>At5g46070 putative protein
Length = 1060
Score = 40.4 bits (93), Expect = 0.002
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 265 ELLAFLLSQRLDQTRADALV------ELQTLLVDILATLDKAIAVEQLIETKQAQVTSNT 318
E+ A ++ D+ R DA+ E Q L ++ LA +++A E+ +E + Q T
Sbjct: 773 EIEAKRATELADKARTDAVTSQKEKSESQRLAMERLAQIERA---ERQVENLERQKTD-- 827
Query: 319 NGLLPSKDEILKLTARKALIADELSSVDARLDELQREVAKLEKHK-----------AMLI 367
+DE+ +L + +++ ++AR++E ++E+ L K L+
Sbjct: 828 -----LEDELDRLRVSEMEAVSKVTILEARVEEREKEIGSLIKETNAQRAHNVKSLEKLL 882
Query: 368 DEGP----AVNSRLNTLAAECTNVMLSTAQLSKEVAAERRVKQSLDSRIAAA 415
DE A N R L+ E L +E+A R + +LD++I AA
Sbjct: 883 DEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQARLKETALDNKIRAA 934
>At1g23540 putative serine/threonine protein kinase
Length = 731
Score = 39.3 bits (90), Expect = 0.004
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 21/153 (13%)
Query: 13 SSKPPPIALSSSSSSLESSSSSLNSTESDPV-------WDKLTFYFNSKPIAWQHPGCEP 65
SS P P A SSS+ L S+ ++ P+ D +S P P P
Sbjct: 37 SSPPSPPADSSSTPPLSEPSTPPPDSQLPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPP 96
Query: 66 YYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIG------- 118
+ E S PP+D + P+P E N ++ + Q PP P +G
Sbjct: 97 PTSNE-----SPSPPEDSETPPAPPNESN-DNNPPPSQDLQSPPPSSPSPNVGPTNPESP 150
Query: 119 -LMPPPKADVLVSTHSEPSSRQLQTSPQQPQPS 150
L PP T+S P+S T+P QPS
Sbjct: 151 PLQSPPAPPASDPTNSPPASPLDPTNPPPIQPS 183
Score = 37.7 bits (86), Expect = 0.012
Identities = 42/155 (27%), Positives = 56/155 (36%), Gaps = 14/155 (9%)
Query: 13 SSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECR 72
+S PP+ S S +SSS+ S S P D P+ P P T
Sbjct: 29 NSALPPVDSSPPSPPADSSSTPPLSEPSTPPPDS-----QLPPL----PSILPPLTDSPP 79
Query: 73 DNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTH 132
+ PP D P P S++ E E P P++ PPP D+
Sbjct: 80 PPSDSSPPVDSTPSPPPP----TSNESPSPPEDSETPPAPPNESNDNNPPPSQDLQSPPP 135
Query: 133 SEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHA 167
S PS T+P+ P P P A +SP A
Sbjct: 136 SSPSPNVGPTNPESP-PLQSPPAPPASDPTNSPPA 169
>At1g07360 unknown protein
Length = 481
Score = 38.9 bits (89), Expect = 0.005
Identities = 40/140 (28%), Positives = 49/140 (34%), Gaps = 9/140 (6%)
Query: 59 QHPGCEPYYTKECRDNLSN--FPPQDMQNMPS--PAREENVSHDEVQGSEGQE----PPI 110
Q P + YY N +P D Q M + +E S E G+ P
Sbjct: 331 QPPPMQQYYMHPPPANQDKPYYPSMDPQRMGAVISTQEAGGSSTENNGASSSSYMMPPHQ 390
Query: 111 IQPDQVIGLMPPP-KADVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKG 169
P G MP P + + H +PS Q P P PQQP G+R A S
Sbjct: 391 SYPPPPYGYMPSPYQQQYPPNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTAVSA 450
Query: 170 GSASSKTAASSHTSGERLSA 189
S S A S SG A
Sbjct: 451 ISPDSAPAGSGAPSGSSQQA 470
>At1g24460 unknown protein
Length = 1791
Score = 38.5 bits (88), Expect = 0.007
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 215 QAETTETAQSGGVADDSQIEEAFVQLKGLVFDAGFISGVRAN-SRLGQEVKELLAFLLSQ 273
+ E E +S A S++ E LK LV DA +S N SRL +E + + A
Sbjct: 855 EQEEIEKVKSEVDALTSKLAETQTALK-LVEDA--LSTAEDNISRLTEENRNVQA----- 906
Query: 274 RLDQTRADALVELQTLLVD---ILATLDKAIAVEQLIETKQAQVTSNTNGLLPSKDEILK 330
+ +A +ELQ + D + + LD+ +A + +E Q N + ++ K+E
Sbjct: 907 ----AKENAELELQKAVADASSVASELDEVLATKSTLEAALMQAERNISDIISEKEEAQG 962
Query: 331 LTARKALIADELSSVDARLDELQREVAKLEKHKAMLIDEGPAVNSRLNTLAAECTNVMLS 390
TA + + + LQ+E A ++K+K L + +NS TLA +N+
Sbjct: 963 RTA----------TAEMEQEMLQKE-ASIQKNK--LTEAHSTINSLEETLAQTESNM--- 1006
Query: 391 TAQLSKEVAAERRVKQSLDSRIAAAGVQLEAFKSRI 426
LSK++ ++ + SL + + ++ E ++++
Sbjct: 1007 -DSLSKQIEDDKVLTTSLKNELEKLKIEAEFERNKM 1041
>At3g13965 unknown protein
Length = 209
Score = 38.1 bits (87), Expect = 0.009
Identities = 25/95 (26%), Positives = 38/95 (39%), Gaps = 6/95 (6%)
Query: 79 PPQDMQNMPSPAREENVSHDEVQGSEGQ-EPPIIQPDQVIGLMPPPKADVLVSTHSEPSS 137
PP +QN+ P +++ + G +PP + P Q PP K+ + V + P
Sbjct: 38 PPSPLQNLSPPPQQQFMQSPPFPPESGNTQPPPLTPPQFNTPPPPSKSTINVMSPPPPPL 97
Query: 138 RQLQTSPQQPQPSP-----QQPRQGARVALSSPHA 167
P P PSP +P R S PH+
Sbjct: 98 PSPPPPPPPPTPSPPPPPISKPPPPPRAQASPPHS 132
>At4g02880 unknown protein
Length = 552
Score = 37.7 bits (86), Expect = 0.012
Identities = 46/219 (21%), Positives = 91/219 (41%), Gaps = 22/219 (10%)
Query: 197 SIFQSFFDGTLDLESPPRQAETT-ETAQSGGVADDSQIEEAFVQLKGLV----FDAGFIS 251
++ +S + ++E ++AE E A GG ++EE L+ AG +
Sbjct: 292 TVMESIMNLMREVELQEKEAEKAKEDASIGGFDTLDKVEELKKMLEHAKEANDMAAGEVY 351
Query: 252 GVRANSRLGQEVKELLAFLLSQRLDQTRADALVELQTLLVDILATLDKAIAVEQLIETKQ 311
G R S L EV EL L+S L + R ++L L + VD+ L A+ ++ E ++
Sbjct: 352 GER--SILTTEVNELENRLIS--LSEERDNSLSVLDEMRVDLEIRLATALGIKNAAEQEK 407
Query: 312 AQVTSNTNGLLPSKDEILKLTARKALIADELSSVDARLDELQREVAKLEKHKAMLIDEGP 371
+ + ++ I++ +++ + LQ+E + K + L+D G
Sbjct: 408 QEKEGSARKAFAEQEAIMERVVQESKL-------------LQQEAEENSKLREFLMDHGR 454
Query: 372 AVNSRLNTLAAECTNVMLSTAQLSKEVAAERRVKQSLDS 410
V+S ++ C ++ + V + + S S
Sbjct: 455 IVDSLQGEISVICQDIRHLKEKFDNRVPLSQSISSSQTS 493
>At4g02960 putative polyprotein of LTR transposon
Length = 1456
Score = 37.4 bits (85), Expect = 0.016
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 24 SSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGC-EPYYTKECRDNLSNFPPQD 82
S+++ S+S ++S P W T + P+ P C P+ R PP
Sbjct: 731 STTNFGVSTSQEQRSDSAPNWPSHTT-LPTTPLVLPAPPCLGPHLDTSPR------PPSS 783
Query: 83 MQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVSTHSEPSSRQLQT 142
PSP VS + S P +P P P A T + S+ +
Sbjct: 784 ----PSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPH-QTQNSNSNSPILN 838
Query: 143 SPQQPQPSPQQPRQGA---RVALSSPHAKGGSAS---SKTAASSHTSGERLSALLVEDPL 196
+P PSP P Q + + +SSPH S S + +SS TS L +L P+
Sbjct: 839 NPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPI 898
Score = 30.4 bits (67), Expect = 1.9
Identities = 39/142 (27%), Positives = 54/142 (37%), Gaps = 31/142 (21%)
Query: 14 SKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECRD 73
S P P+ + SSS SSS + + S+P T ++ P P +P+ T+
Sbjct: 782 SSPSPLCTTQVSSSNLPSSSISSPSSSEP-----TAPSHNGP----QPTAQPHQTQNSNS 832
Query: 74 N---LSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVS 130
N L+N P N PSP S Q P+ P I P +S
Sbjct: 833 NSPILNNPNP----NSPSP------------NSPNQNSPL--PQSPISSPHIPTPSTSIS 874
Query: 131 THSEPSSRQLQTSPQQP-QPSP 151
+ PSS T P P P+P
Sbjct: 875 EPNSPSSSSTSTPPLPPVLPAP 896
>At5g15450 clpB heat shock protein-like
Length = 968
Score = 36.6 bits (83), Expect = 0.027
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 341 ELSSVDARLDELQREVAKLEKHKAMLI-DEGPAVNSRLNTLAAECTNVMLSTAQLSKEVA 399
E++S LDEL R V KLE + L D A RLN + E + A+L+++
Sbjct: 480 EITSKPTALDELDRSVIKLEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWE 539
Query: 400 AERRVKQSLDS 410
ER V L S
Sbjct: 540 HERSVMSRLQS 550
>At1g06530 hypothetical protein
Length = 323
Score = 35.4 bits (80), Expect = 0.060
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 342 LSSVDARLDELQREVAKLEKHKAMLIDEGPAVNSRLNTLAAECTNVMLSTAQLSKEVAAE 401
L ++ +R EL+ EVA+L+ EG + L +E + +L KEVA
Sbjct: 97 LEAIASRASELETEVARLQHELITARTEGEEATAEAEKLRSEISQKGGGIEELEKEVAGL 156
Query: 402 RRVKQSLDSRIAAAGVQLEAFK 423
R VK+ + R+ +L A +
Sbjct: 157 RTVKEENEKRMKELESKLGALE 178
Score = 29.3 bits (64), Expect = 4.3
Identities = 30/159 (18%), Positives = 68/159 (41%), Gaps = 7/159 (4%)
Query: 254 RANSRLGQEVKELLAFLLSQRLDQTRADALVELQTLLVDILATLDKAI-AVEQLIETKQA 312
R N + ++++ L A + R +++A + +D K + A+ +
Sbjct: 50 RDNDAINRKIESLTAEIEELRGAESKAKRKMGEMEREIDKSDEERKVLEAIASRASELET 109
Query: 313 QVTSNTNGLLPSKDEILKLTARKALIADELSSVDARLDELQREVAKLEKHKAMLIDEGPA 372
+V + L+ ++ E + TA + E+S ++EL++EVA L K
Sbjct: 110 EVARLQHELITARTEGEEATAEAEKLRSEISQKGGGIEELEKEVAGLRTVKEENEKRMKE 169
Query: 373 VNSRLNTLAAECTNVMLSTAQLSKEVAAERRVKQSLDSR 411
+ S+L L + + +K+ AE +++ +D++
Sbjct: 170 LESKLGALEVK------ELDEKNKKFRAEEEMREKIDNK 202
>At3g57070 unknown protein
Length = 417
Score = 35.0 bits (79), Expect = 0.079
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 20/141 (14%)
Query: 12 FSSKPPP---IALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYT 68
F SKP P ++L+ SS L+ S + E D W LT + K W+H E +
Sbjct: 138 FCSKPDPNRNVSLNGSSLKLDESYEIVRIEEDDGDWVPLT--YKPKQPLWKHLSEESF-- 193
Query: 69 KECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVL 128
LS+ P + + + +S+ S + P +P + + P +L
Sbjct: 194 ------LSDLDPSIVSSYKKALSSKLLSNH----SNTRNPH--RPTKSLSCSPSSNPSIL 241
Query: 129 VSTHSEP-SSRQLQTSPQQPQ 148
+S + SS QL +SP +P+
Sbjct: 242 ISEEPKSVSSSQLISSPAKPR 262
>At1g49490 hypothetical protein
Length = 847
Score = 35.0 bits (79), Expect = 0.079
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 68 TKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQG-SEGQEPPIIQPDQVIGLMPPPKAD 126
T C N + P Q +P +R + S D+ G S G P P + P K +
Sbjct: 353 TNNCLQNRPSQKPAK-QCLPVVSRPVDCSKDKCSGGSNGGSSPSPNPPRT-SEPKPSKPE 410
Query: 127 VLVSTHSEPSSRQLQTSPQQPQPSPQQPR 155
++ S+ S + +P+QP P PQ P+
Sbjct: 411 PVMPKPSDSSKPETPKTPEQPSPKPQPPK 439
Score = 31.6 bits (70), Expect = 0.87
Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 20/158 (12%)
Query: 13 SSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECR 72
S P P S S S S P K + KP +H +P E
Sbjct: 393 SPSPNPPRTSEPKPSKPEPVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKP----EEP 448
Query: 73 DNLSNFPPQDMQNMPSPAR-EENVSHDEVQGSEGQEP----------PIIQPDQVIGLMP 121
+N P Q P P++ E++ ++ + E +P P+ P++ G P
Sbjct: 449 ENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPTP 508
Query: 122 --PPKADVLVSTHSEPSSRQLQTS---PQQPQPSPQQP 154
P A + + S P + T PQ P PSP P
Sbjct: 509 DDPYDASPVKNRRSPPPPKVEDTRVPPPQPPMPSPSPP 546
>At3g22380 hypothetical protein
Length = 663
Score = 34.7 bits (78), Expect = 0.10
Identities = 60/293 (20%), Positives = 106/293 (35%), Gaps = 33/293 (11%)
Query: 6 VPRAMWFSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEP 65
V A +S PP S SSSS+ + T+ P+ K + S P+A Q
Sbjct: 252 VSPASILASPSPPAPTSPSSSSISVRKKLPSGTKQKPLPPKSSSSKLSSPVAVQ------ 305
Query: 66 YYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQ-------EPPIIQPDQVIG 118
E ++ M MPS +++E +D + ++ PI P +
Sbjct: 306 ---DEIEIEIAEV-LYGMMRMPSTSKQEAAGNDLTEAAKSTVEVKSRVSSPISNPQTL-- 359
Query: 119 LMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASS---K 175
P + L + S + + ++P+ + +RV A+ S S
Sbjct: 360 ---PQSSITLAANSSSSNVSAIAPKRKKPRHVKYEDDNSSRVTTIKSEAEAPSKSQVPFS 416
Query: 176 TAASSHTSGERLSALLVEDPLSIFQSFFDGTLDLESPPRQAETTET------AQSGGVAD 229
S SGE S++L D + + +LD E ET + SG +D
Sbjct: 417 NQLKSSGSGEGNSSVL--DSIIPLTRESNASLDSEKKENNLSKDETILPKVESSSGFRSD 474
Query: 230 DSQIEEAFVQLKGLVFDAGFISGVRANSRLGQEVKELLAFLLSQRLDQTRADA 282
+ + + + D VR++S G E+ E +A ++ + +A
Sbjct: 475 GEGAKSSSPEKEKFEIDLMAPPPVRSSSERGGEMMECVAAEAKPKVTEVETEA 527
>At2g25050 hypothetical protein
Length = 742
Score = 34.7 bits (78), Expect = 0.10
Identities = 39/157 (24%), Positives = 55/157 (34%), Gaps = 21/157 (13%)
Query: 12 FSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKEC 71
F S P + ++S S ST S P ++F P+ P
Sbjct: 480 FHSSPSSLGITSILHD-HGSCKDEESTSSSPASPSISFLPTLHPLTSSQP---------- 528
Query: 72 RDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKA----DV 127
PQ Q+ P+P E + PP+ +P +++ PPP
Sbjct: 529 ----KKASPQCPQS-PTPVHSNGPPSAEAAVTSSPLPPL-KPLRILSRPPPPPPPPPISS 582
Query: 128 LVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSS 164
L ST S S+ + P P P P Q R ALSS
Sbjct: 583 LRSTPSPSSTSNSIATQGPPPPPPPPPLQSHRSALSS 619
>At1g79280 hypothetical protein
Length = 2111
Score = 34.7 bits (78), Expect = 0.10
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 305 QLIETKQAQVTSNTNGLLPSKDEILKLTARKALIADELSSVDARLDELQREVAKLEKHKA 364
+L+E K A+++ + + D+I+KLT D S +ARL E E+A+ + +
Sbjct: 129 ELLEQKDAEISEKNSTIKSYLDKIVKLT-------DTSSEKEARLAEATAELARSQAMCS 181
Query: 365 MLIDEGPAVNSRLNTLAAECTNVMLSTAQLSKEVAAERRVKQSLDSRIAAAGVQLE 420
L E L E T + S A+L RR L+S ++A V +E
Sbjct: 182 RLSQEKELTERHAKWLDEELTAKVDSYAEL-------RRRHSDLESEMSAKLVDVE 230
Score = 30.8 bits (68), Expect = 1.5
Identities = 41/168 (24%), Positives = 66/168 (38%), Gaps = 30/168 (17%)
Query: 80 PQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPP--------KADVLVST 131
PQ ++ SP + ++ E G EG++P +P+ + P +AD LVS
Sbjct: 1724 PQLVKPEESPKVDVDMPEAEGTGDEGKQPAAHEPESQVTTSVRPVQTLVRKRQADSLVSE 1783
Query: 132 HSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTSGERLSALL 191
+ S Q +TS + P +S AKG + T + GE L+
Sbjct: 1784 PQQDSLTQGETSSEIAPP-------------ASKKAKGSESHPDT-----SEGENLAKEP 1825
Query: 192 VEDPLSIFQSFFDG---TLDLESPPRQAETTETAQSGGVADDSQIEEA 236
D L + DG + E+ + E AQ AD+ +EE+
Sbjct: 1826 AIDELMDATTTTDGDNEETEAENAEEKTEEYVEAQQDNEADE-PVEES 1872
>At5g08450 unknown protein
Length = 918
Score = 34.3 bits (77), Expect = 0.13
Identities = 36/122 (29%), Positives = 44/122 (35%), Gaps = 15/122 (12%)
Query: 83 MQNMPSPAREENVSHDEVQGSEGQEPPIIQ---PDQVIGLMPPPKADVLVSTHSEPSSRQ 139
M +P + EE V+H S + P P + PP A V H +P
Sbjct: 1 MSGVPKRSHEEGVTHPSSSSSVAKYPHEDSGSYPKSPHQPVTPPPAQVH-HNHQQPHQHP 59
Query: 140 LQTSPQQPQPSPQQ-PRQGARVALSSPHAKGGSASS----------KTAASSHTSGERLS 188
S QPQP Q P + SP A SAS+ K A S GER S
Sbjct: 60 QSQSQSQPQPHLQALPHPHSHSHSHSPLAAAASASAPYEVESRTVVKVARSEPRDGERRS 119
Query: 189 AL 190
L
Sbjct: 120 PL 121
>At4g08400 extensin-like protein
Length = 513
Score = 34.3 bits (77), Expect = 0.13
Identities = 43/175 (24%), Positives = 58/175 (32%), Gaps = 28/175 (16%)
Query: 12 FSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKEC 71
+ S PPP SS S S ++ P + +NS P PYY+
Sbjct: 354 YKSPPPPYVYSSPPPPYYSPSPKVDYKSPPP-----PYVYNSPP--------PPYYSPSP 400
Query: 72 RDNLSNFPPQDMQNMP-----SPAREENV-SHDEVQGSEGQEPPIIQPDQVIGLMPPPKA 125
+ + + PP + N P SP+ + N + PP P + PP
Sbjct: 401 KVDYKSPPPPYIYNSPPPPYYSPSPKVNYKTPPPPYVYSSPPPPYYSPSPKVNYKSPPPP 460
Query: 126 DVLVSTHSEPSSRQLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASS 180
V +S P SP SP P SSP S SSK S
Sbjct: 461 YV----YSSPPPPYYSPSPNVDYKSPPPP-----YVYSSPPTPYYSPSSKVTYKS 506
Score = 30.4 bits (67), Expect = 1.9
Identities = 32/148 (21%), Positives = 48/148 (31%), Gaps = 22/148 (14%)
Query: 12 FSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKEC 71
+ S PPP SS S S ++ P + ++S P PYY+
Sbjct: 205 YKSPPPPYVYSSPPPPYYSPSPKVDYKSPPP-----PYVYSSPP--------PPYYSPSP 251
Query: 72 RDNLSNFPPQDMQNMPSPAREENVSHDEVQGS-----EGQEPPIIQPDQVIGLMPPPKAD 126
+ N + PP ++ P P + D PP P + PP
Sbjct: 252 KVNYKSPPPPYYRSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPY 311
Query: 127 VLVSTHSEPSSRQLQTSPQQPQPSPQQP 154
V +S P +P+ SP P
Sbjct: 312 V----YSSPPPPYYSPTPKVDYKSPPPP 335
Score = 29.6 bits (65), Expect = 3.3
Identities = 36/159 (22%), Positives = 55/159 (33%), Gaps = 16/159 (10%)
Query: 7 PRAMWFSSKPPPIALSSSSSSLESSS--SSLNSTESDPVWD---KLTFYFNSKPIAWQHP 61
P+ +SS PPP S S S S + S+ P + K+ + P + P
Sbjct: 58 PKPSIYSSSPPPSYYSPSPKVDYKSPPPSYVYSSPPPPYYSPSPKVDYKSLPPPYVYSSP 117
Query: 62 GCEPYYTKECRDNLSNFPPQDMQNMPSP------AREENVSHDEVQGSEGQEPPIIQPDQ 115
PYY+ + N + PP + + P P + + S PP P
Sbjct: 118 P-PPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKGDYKSPPPPYVYSSPPPPYYSPSP 176
Query: 116 VIGLMPPPKADVLVSTHSEPSSRQLQTSPQQPQPSPQQP 154
+ PP V +S P +P+ SP P
Sbjct: 177 KVDYKSPPPPYV----YSSPPPPYYSPTPKVDYKSPPPP 211
Score = 28.1 bits (61), Expect = 9.6
Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 35/139 (25%)
Query: 12 FSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKEC 71
+ S PPP +S S S +N P + ++S P PYY+
Sbjct: 404 YKSPPPPYIYNSPPPPYYSPSPKVNYKTPPP-----PYVYSSPP--------PPYYSPSP 450
Query: 72 RDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVS- 130
+ N + PP + + P PP P + PP V S
Sbjct: 451 KVNYKSPPPPYVYSSP-------------------PPPYYSPSPNVDYKSPPPPYVYSSP 491
Query: 131 --THSEPSSRQLQTSPQQP 147
+ PSS+ SP P
Sbjct: 492 PTPYYSPSSKVTYKSPPPP 510
>At3g15190 30S ribosomal protein S20
Length = 202
Score = 34.3 bits (77), Expect = 0.13
Identities = 38/142 (26%), Positives = 63/142 (43%), Gaps = 9/142 (6%)
Query: 168 KGGSASSKTAASSHTSGERL---SALLVEDPLSIFQSFFDGTLDLESPPRQAETTETAQS 224
KG S SS +++ S+ G S+L +S +F G L ++ P RQ E A
Sbjct: 24 KGISCSSPSSSFSNRRGASATLSSSLSFSQSVSQCVAFSTGNLWVQKPMRQLIVCEAAAP 83
Query: 225 GGVADDSQIEEAFVQLKGLVFDAGFISGVRANSRLGQEVKELLAFLLSQRLDQTRADALV 284
AD S + A K V++ S R + E E L ++ +AD +V
Sbjct: 84 TKKAD-SAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGL-----KKKTDAQADEIV 137
Query: 285 ELQTLLVDILATLDKAIAVEQL 306
++ L+ + + +DKA+ V+ L
Sbjct: 138 TVEKLIGEAYSAIDKAVKVKAL 159
>At1g70140 hypothetical protein
Length = 760
Score = 34.3 bits (77), Expect = 0.13
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 81 QDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKADVLVS--THSEPSSR 138
+ + +P + SH + + Q PP ++ + PPP V S T S P
Sbjct: 201 EPVTEIPLLRGRSSTSHSVIHNEDHQPPPQVKQSEPTPPPPPPSIAVKQSAPTPSPPPPI 260
Query: 139 QLQTSPQQPQPSPQQPRQGARVALSSPHAKGGSASSKTAASSHTS 183
+ +SP P P P + + G ALSS +K A + A+ TS
Sbjct: 261 KKGSSPSPPPPPPVK-KVG---ALSSSASKPPPAPVRGASGGETS 301
>At1g48620 unknown protein
Length = 479
Score = 34.3 bits (77), Expect = 0.13
Identities = 48/218 (22%), Positives = 79/218 (36%), Gaps = 43/218 (19%)
Query: 6 VPRAMWFSSKPPPIALSSSSSSLESSSSSLNSTESDPVWDKLTFYFNSKPIAWQHPGCEP 65
V ++ +S PPP +S + SLE S E+ P+ D + P
Sbjct: 135 VKKSYKLASTPPPPPPTSVAPSLEPPRSDFIVNENQPLPDPVL------------ASSTP 182
Query: 66 YYTKECRDNLSNFPPQDMQNMPSPAREENVSHDEVQGSEGQEPPIIQPDQVIGLMPPPKA 125
K R P +Q P P ++ ++ E P+ +P++ I + PP
Sbjct: 183 QTIKRGRGRPPKAKPDVVQ--PQPLTNGKLTWEQ------SELPVSRPEE-IQIQPP--- 230
Query: 126 DVLVSTHSEPSSRQLQTSPQQP-QPSPQQPRQGARVALSSPHA--KGGSASSKTAA---S 179
QL PQQP + P +PR+ P A GG + K S
Sbjct: 231 -------------QLPLQPQQPVKRPPGRPRKDGTSPTVKPAASVSGGVETVKRRGRPPS 277
Query: 180 SHTSGERLSALLVEDPLSIFQSFFDGTLDLESPPRQAE 217
+G ++V P S+F +G + P++ +
Sbjct: 278 GRAAGRERKPIVVSAPASVFPYVANGGVRRRGRPKRVD 315
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.310 0.126 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,993,142
Number of Sequences: 26719
Number of extensions: 399016
Number of successful extensions: 2536
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 2254
Number of HSP's gapped (non-prelim): 310
length of query: 426
length of database: 11,318,596
effective HSP length: 102
effective length of query: 324
effective length of database: 8,593,258
effective search space: 2784215592
effective search space used: 2784215592
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0224.12