BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0220.1
(751 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22560 hypothetical protein 37 0.031
At1g06780 unknown protein (At1g06780) 36 0.069
At3g53930 unknown protein 35 0.12
At1g03780 hypothetical protein 33 0.59
At5g15580 putative protein 33 0.77
At1g32120 hypothetical protein 33 0.77
At1g06670 DEIH-box RNA/DNA helicase 32 1.3
At5g58670 phosphoinositide specific phospholipase C (AtPLC1) 32 1.7
At4g27430 COP1-interacting protein 7 (CIP7) 32 1.7
At3g25460 hypothetical protein 32 1.7
At2g03260 unknown protein 32 1.7
At1g55540 unknown protein 32 1.7
At5g42950 putative protein 31 2.2
At4g09160 putative protein 31 2.2
At3g28790 unknown protein 31 2.2
At4g37820 unknown protein 31 2.9
At2g24930 hypothetical protein 31 2.9
At1g56290 unknown protein (F14G9.10) 31 2.9
At1g21580 hypothetical protein 31 2.9
At5g08430 putative protein 30 3.8
>At2g22560 hypothetical protein
Length = 891
Score = 37.4 bits (85), Expect = 0.031
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 4/173 (2%)
Query: 286 SPFKTREEEGEVTSKDIKDLMEQANYTNKYLQTLGESQSHDDSSRKGKGKVKTEPSSSSD 345
S + + +E E K ++DL + LQT + H+ + G + +P S SD
Sbjct: 351 SDLRNKLKEMEEKLKALQDLDRNVLDKSSNLQTHFDDACHNLDNLSGGNLHEVKPESESD 410
Query: 346 LDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDKELLQKVVEQLQLLNQVIPE--- 402
++ + +K L + + S + + E KE K V+ Q N I E
Sbjct: 411 -NLAISIEPQKDLEGEKRTLDISEEIKEHQKETGEEKKEAPVKSVKFEQTRNATIAEDST 469
Query: 403 TPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDSEDQSVKSI 455
P P+ V + + + ++ T + L+N+ + + SD D + S+
Sbjct: 470 IPSTNPDTVLESTEKVDSDLEKQDASDKTDSVLDNVLENQAASDQTDSVLDSV 522
>At1g06780 unknown protein (At1g06780)
Length = 589
Score = 36.2 bits (82), Expect = 0.069
Identities = 53/217 (24%), Positives = 87/217 (39%), Gaps = 18/217 (8%)
Query: 263 TLSNLPPKTPF---LLKGAQSTPVLASPFKTREEEGEVTSKDIKDLMEQANYTNKYLQTL 319
T++ L KT F L KG ++T V + +V +K+I+D + QA +
Sbjct: 120 TVNQLANKTDFKPPLSKGEKNTRVQP------DRATDVKTKEIRDKIIQAKAYLNFAPPG 173
Query: 320 GESQSHDDSSRKGKGKVKTEPSSSSDLDIPKGC-----QLEKPLFKHFQISNRSRHSAQT 374
SQ + + K ++ ++ D D+ KG +E L+K ++ N A
Sbjct: 174 SNSQVVKELRGRLKELERSVGDATKDKDLSKGALRRVKPMENVLYKASRVFNNCPAIATK 233
Query: 375 LRAKNESDKELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSA--PAPPKTRTSTRNTS 432
LRA N + +E +Q Q L Q+ T +S S P+ R +
Sbjct: 234 LRAMNYNTEEQVQAQKNQAAYLMQLAARTTPKGLHCLSMRLTSEYFSLDPEKRQMPNQQN 293
Query: 433 TSLNNIEDGKVESDSEDQSVKSIPVNTVIHNSRNQWR 469
N V SD+ S S+ VN+ I +S+ R
Sbjct: 294 YFDANFNHYVVFSDNVLAS--SVVVNSTISSSKEPER 328
>At3g53930 unknown protein
Length = 711
Score = 35.4 bits (80), Expect = 0.12
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 41 DITLPDKWSLEKAAPAQPVETPEFREIIQHQSGQVDLIFDRRNSFSIPRS---IRTSSDF 97
D++ K +K PVE F E H + S+ RS RT +DF
Sbjct: 245 DLSTDCKDLCQKLLRRNPVERLTFEEFFHHP------FLSDKQSYDFTRSRLDSRTMNDF 298
Query: 98 QSAMSRRSFSMSRRNQPESSA----RPSLSHEGSTIHLAGYVNTTPVKTTYDKSDEDHQS 153
S+ S S ++ +Q + S EGS + + +T+P+K++Y S E ++
Sbjct: 299 HSSGSSPSRNIEEISQEDGLPFFLDDDSSGPEGSP---SSFKHTSPMKSSYGFSVERREA 355
Query: 154 TLSP--------TYSSLETPGETSDF 171
LSP YS + ET++F
Sbjct: 356 ALSPLKNMDLSSRYSRVSHRAETNNF 381
>At1g03780 hypothetical protein
Length = 753
Score = 33.1 bits (74), Expect = 0.59
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 349 PKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDKELLQKVVEQLQLLNQVIPETPEPTP 408
PK C +P FQ+ + RH + R + E + ++ ++L VI E P P P
Sbjct: 545 PKQCTQPEP----FQLESLVRHEEEMRREREERRRMETEEAQKRLFKAQPVIKEDPIPVP 600
Query: 409 EAVSNP 414
E V P
Sbjct: 601 EKVRMP 606
>At5g15580 putative protein
Length = 927
Score = 32.7 bits (73), Expect = 0.77
Identities = 58/293 (19%), Positives = 105/293 (35%), Gaps = 45/293 (15%)
Query: 239 AIKKKISYPYQVDMIKWQHKDGKETLSNLPPKTPFLLKGAQSTPVLASPFKTREEEGEVT 298
+IKK + + + W DG + +P T + G + FK E++
Sbjct: 308 SIKKMMPAKFPMKASPWAQVDGAKNQVKIPDATTLTVYGEIQKRLSQLEFKKSEKD---- 363
Query: 299 SKDIKDLMEQANYTNKYL-------QTLGESQSHDDSSRKGKGKVKTEPSSSSDLDIPKG 351
+ +K ++E T + + +TL S +++ + T + I
Sbjct: 364 LRALKQILEAMEKTQQLISKDDDDNKTLCSSNFMQRNNQPIPSAINTSSMNFKSSSIVVM 423
Query: 352 CQLEKPLFKHFQISNRSRHSAQTLRAKNESDKEL--LQKVVEQLQLLNQVIPETPEPTPE 409
P+FK I+ + S + + N L QKV+ + Q V P +
Sbjct: 424 KAATAPVFKDTGIAGSASFSPRNVALPNVKVGNLRQAQKVIPRKQSAMDVTPRPGYYKGQ 483
Query: 410 AVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDS------------EDQSVKSIPV 457
S TSTR + + + GK++ S E QS + P
Sbjct: 484 TEST---------MKNTSTRPLQSKSDMAKSGKIQKPSVSLRTPPKKLGFEKQSRPTSPK 534
Query: 458 NTVIHNSRNQW-RKETKLYYPR----------ATAPDLLLEESSNFKSFSANN 499
+ N R Q R++T+ PR + D L +ESS+ +S +++
Sbjct: 535 PELNKNQRQQLSRQQTESASPRRKPGIKSRGLQQSEDRLSDESSDLRSLRSDS 587
>At1g32120 hypothetical protein
Length = 1206
Score = 32.7 bits (73), Expect = 0.77
Identities = 40/165 (24%), Positives = 68/165 (40%), Gaps = 19/165 (11%)
Query: 335 KVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNE-----------SDK 383
+V EP SS L + +KP H ++R + +LRA E S +
Sbjct: 770 RVSKEPYMSSSLSVSSSSTRKKPPRSHEAANSRGYNHTPSLRASKEPYKSSSLSGSSSTR 829
Query: 384 ELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKV 443
+ + E P +P + E P++S +P TR + +S ++N+ +
Sbjct: 830 KKPPRSHEASSSRGYNHPPSPRVSKELNKTPSISG-SPSATRNKSPRSSENVNSCGN--- 885
Query: 444 ESDSEDQSVKSIPVNTVIHNSRNQWRKETKLYYPRATAPDLLLEE 488
S S SV +T I S+ + +T+L +A + LLEE
Sbjct: 886 -SSSGGNSVVKRNTDTSIIVSKQESPIKTQLDISKA---NKLLEE 926
>At1g06670 DEIH-box RNA/DNA helicase
Length = 1576
Score = 32.0 bits (71), Expect = 1.3
Identities = 32/111 (28%), Positives = 55/111 (48%), Gaps = 17/111 (15%)
Query: 337 KTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQT-LRAKNESDKELLQKVVEQLQL 395
+TEP S+++LD+ K S+ + + QT LR N SD +++ + L L
Sbjct: 1386 QTEPKSANNLDLGN--------MKENTPSDLANENEQTELRLPNNSDYGNMEESLP-LNL 1436
Query: 396 LNQVIPETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESD 446
N E P+PT + P +A P K R+ ++ S+NN++ G +E +
Sbjct: 1437 ANG--DEQPDPT----TAPMEAAKQPKKKRSRSKKCK-SVNNLDLGNMEEN 1480
>At5g58670 phosphoinositide specific phospholipase C (AtPLC1)
Length = 561
Score = 31.6 bits (70), Expect = 1.7
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 396 LNQVIPETPE--PTPEAVSNPAVSAPAPPK-------TRTSTRNTSTSLNNIEDGKVESD 446
L Q ET E P+PE++ N + + PPK ++ ST + ST I D + +
Sbjct: 223 LFQCTDETTECFPSPESLKNKILISTKPPKEYLQTQISKGSTTDESTRAKKISDAEEQVQ 282
Query: 447 SEDQSVKSIPVNTVI 461
ED+ +I +I
Sbjct: 283 EEDEESVAIEYRDLI 297
>At4g27430 COP1-interacting protein 7 (CIP7)
Length = 1058
Score = 31.6 bits (70), Expect = 1.7
Identities = 30/118 (25%), Positives = 51/118 (42%), Gaps = 9/118 (7%)
Query: 371 SAQTLRAKNESDKELLQKVVEQLQL------LNQVIPETPEPTPEAVSNPAVSAPAPPKT 424
S +T R KN ++ + +KV +Q ++ N + E + T + S A +
Sbjct: 930 SEETARVKNRPNEIIAEKVQDQTKIDDQETVKNTSVSEDKQITTKHYSEDVGEVQASQEK 989
Query: 425 RTSTRNTST-SLNNIEDGKVESDSEDQSVKSIPVNTVIHNSRNQWRKETKLYYPRATA 481
S + + T S N+E+ S + + S P T +SR +W E P+ATA
Sbjct: 990 PVSPKKSVTFSETNMEEKYYFSPAVSEIDISTPPATEADHSRKKWNSEET--SPKATA 1045
>At3g25460 hypothetical protein
Length = 361
Score = 31.6 bits (70), Expect = 1.7
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 554 WDNYLTEDEKNQILTAIK--TDEEGNPIIEDGKFILDAVNSLIFTIAQ 599
W +LT D K +I IK DEE ++ + F+++ N++I+ + +
Sbjct: 282 WIKFLTVDLKPEIKYGIKFLVDEENKVLVYEQNFVINGKNNMIYVVGE 329
>At2g03260 unknown protein
Length = 783
Score = 31.6 bits (70), Expect = 1.7
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 26/134 (19%)
Query: 410 AVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDSEDQ----------SVKSIPVNT 459
A S A++A P +TRT + I++G ++ED+ VK+ +NT
Sbjct: 189 ATSTAAIAASTPARTRTMNPRAQAHMEAIQEGSFSRENEDEDHGSVRGATGDVKTSSLNT 248
Query: 460 ----------VIHNSRNQWRKETKLYYPRATAPDLLLEESSNFKSFSANNVYEWNIDGEN 509
V+ + + K T PR+T +L S N F+ N+ E ++ +
Sbjct: 249 MRGARPAPIEVLDHIKINNTKAT----PRSTIKGVLNSSSQNEIIFNRQNLNE--VEEKL 302
Query: 510 EYGITKILQNMTMV 523
++ + Q + ++
Sbjct: 303 KFAFVEFYQKLRLL 316
>At1g55540 unknown protein
Length = 1821
Score = 31.6 bits (70), Expect = 1.7
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 341 SSSSDLDIPKGCQLEK-PLFKHFQISNRSRHSAQTLRAKNESDKELLQKVVEQLQLLNQV 399
SSSS +P + P+ + F +++ S SA K L V+ LNQ
Sbjct: 1270 SSSSQDPVPASIPISSAPVPQTFSVTSTSTVSATGFNVP--FGKPLTSVKVD----LNQA 1323
Query: 400 IPETPEPTPEAVSN-----PAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESD 446
P TP P+P + PA+S +P +ST +S + +V SD
Sbjct: 1324 APSTPSPSPGPTAGFTFNLPALSPSSPEMVSSSTGQSSLFPPSAPTSQVSSD 1375
>At5g42950 putative protein
Length = 1714
Score = 31.2 bits (69), Expect = 2.2
Identities = 26/90 (28%), Positives = 37/90 (40%), Gaps = 6/90 (6%)
Query: 85 FSIPRSIRTSSDFQS----AMSRRSFSMSRRNQPESSARPSLSHEGSTIHLAGYVNTTPV 140
FS PR IR + + A + S RN P+ RP SHEG G N PV
Sbjct: 379 FSQPRRIRPAGSREDMTFGAEESKDESGETRNYPDDKFRPEASHEGYAPFRRG--NEAPV 436
Query: 141 KTTYDKSDEDHQSTLSPTYSSLETPGETSD 170
+ + S + + S + + GE S+
Sbjct: 437 RELKEPSMQGNAHVQSASPWRQSSGGERSN 466
>At4g09160 putative protein
Length = 723
Score = 31.2 bits (69), Expect = 2.2
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 21/142 (14%)
Query: 324 SHDDSSRKGKGKVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNESDK 383
+ D +G +S +D + + E+P H+A+ S K
Sbjct: 158 AEDSEQPRGVTPTPETETSEADTSLLVTSETEEP-----------NHAAEDYSETEPSQK 206
Query: 384 ELLQKVVEQLQLLNQVIPETPEPT--------PEAVSNPAVSAPAPPKTRTST--RNTST 433
+L++ + +++ + PE P+ PE + P PP T TST +
Sbjct: 207 LMLEQRRKYMEVEDWTEPELPDEAVLEAAASVPEPKQPEPQTPPPPPSTTTSTVASRSLA 266
Query: 434 SLNNIEDGKVESDSEDQSVKSI 455
+ N E+ +VE + Q +S+
Sbjct: 267 EMMNREEAEVEEKQKIQIPRSL 288
>At3g28790 unknown protein
Length = 608
Score = 31.2 bits (69), Expect = 2.2
Identities = 18/47 (38%), Positives = 24/47 (50%), Gaps = 1/47 (2%)
Query: 401 PETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDS 447
P TP P+ S PA S PA KT + + S S+ + K ES+S
Sbjct: 298 PSTPTPSTPTPSTPAPSTPAAGKT-SEKGSESASMKKESNSKSESES 343
Score = 29.6 bits (65), Expect = 6.5
Identities = 31/141 (21%), Positives = 47/141 (32%), Gaps = 5/141 (3%)
Query: 318 TLGESQSHDDSS---RKGKGKVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQT 374
++G S D SS + K++ +SS +E + ++S SA+T
Sbjct: 192 SIGSSSGSDGSSSSDNESSSNTKSQGTSSKSGSESTAGSIETNTGSKTEAGSKSSSSAKT 251
Query: 375 LRAKNESDKELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSAPAP--PKTRTSTRNTS 432
S + + TP P+ S P S P P P T T +T
Sbjct: 252 KEVSGGSSGNTYKDTTGSSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTP 311
Query: 433 TSLNNIEDGKVESDSEDQSVK 453
E SE S+K
Sbjct: 312 APSTPAAGKTSEKGSESASMK 332
>At4g37820 unknown protein
Length = 532
Score = 30.8 bits (68), Expect = 2.9
Identities = 62/288 (21%), Positives = 108/288 (36%), Gaps = 60/288 (20%)
Query: 321 ESQSHDDSSRKGKGKVKTEPSSSSDLDIPKGCQLEKPLFKHFQISNRSRHSAQTLRAKNE 380
E + + S +G G V T+ + + I + + EK + ++ + + + N
Sbjct: 82 EVEDEEGSKNEGGGDVSTDKENGDE--IVEREEEEKAVEENNEKEAEGTGNEEGNEDSNN 139
Query: 381 SDKELLQKVVEQLQLLNQVIPETPEPT--------------PEAVSNPAVSAPAPPKTRT 426
+ E KVV++ + N++ E E SN V K+
Sbjct: 140 GESE---KVVDESEGGNEISNEEAREINYKGDDASSEVMHGTEEKSNEKVEVEGESKSN- 195
Query: 427 STRNTSTSLNNIEDGKVESDSEDQSVKSIPVNTVIHNSRNQWRKETKLYYPRATAPDLLL 486
ST N S ++ E G E +K + +NT + S + ++ETK L
Sbjct: 196 STENVS--VHEDESGPKNEVLEGSVIKEVSLNTTENGSDDGEQQETKSE----------L 243
Query: 487 EESSNFKSFSANN--VYEWNIDGENEYGITKILQNMTMVATTYVTANSCPESLIVEVLVA 544
+ + K FS +N + E N+ N AT ++ ES
Sbjct: 244 DSKTGEKGFSDSNGELPETNLSTSN--------------ATETTESSGSDES-------- 281
Query: 545 GFCGQLKGWWDNYLTEDEKNQILTAIKTDEEGNPIIEDGKFILDAVNS 592
G G+ G+ EDEK + +++ EE + + E GK DA +S
Sbjct: 282 GSSGKSTGYQQTKNEEDEKEK----VQSSEEESKVKESGKNEKDASSS 325
>At2g24930 hypothetical protein
Length = 926
Score = 30.8 bits (68), Expect = 2.9
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 38/250 (15%)
Query: 230 FFFDWFQSYAIKKKISYPYQVDMIK--WQHKDGKETLSNLPPKTPFLLKGAQSTPVLA-- 285
F+ D + A+ I ++V ++K W K ++ L K K + +A
Sbjct: 284 FWPDQLEDPALDNLIQDLHEVKLVKGYWDVKTSEKKKKLLKDKEAEKKKEKKKKKEVAVE 343
Query: 286 ----SPFKTREEEGEVTSKDIKDLMEQANYTNKYLQTLGESQSHDDSSRKGKGKVKTEPS 341
++RE++G+ + + D++ + + L D+S K
Sbjct: 344 SDEDEDVRSREQDGQGDQQSLVDVV------SNLISPLNSRFDTVDTSIK---------E 388
Query: 342 SSSDLDIPKGCQLEKPLFKHFQ-----ISNRSRHSAQTLRAKNESDKE------LLQKVV 390
SS LD+ GCQ+E + F+ I N + + L+A +S L K
Sbjct: 389 MSSRLDVI-GCQIESSVEAKFEGRFGSIENDVKQIKEQLKAIADSKSSSYIRDMFLSKPQ 447
Query: 391 EQLQLLNQVIPETPEP-TPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIEDGKVESDSED 449
Q Q N+ P P+ ++N +AP+PP ++ + S L E KV S+
Sbjct: 448 PQTQEDNRKAQTQKTPDVPKKITNNQSAAPSPPPSKQADVGVSRKL-EAEFDKVSIVSDV 506
Query: 450 QSVKSI-PVN 458
V+++ P+N
Sbjct: 507 DFVETVSPLN 516
>At1g56290 unknown protein (F14G9.10)
Length = 807
Score = 30.8 bits (68), Expect = 2.9
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 382 DKELLQ-KVVEQLQLLNQVIPET--PEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNI 438
D +LL+ +V + L+ ++P T +P P + AP T+ + R + L
Sbjct: 180 DDDLLEGDIVRKKMGLDWMLPPTRKADPNPASDVEDKFEESAPEVTKVNPRELNPYLKEN 239
Query: 439 EDGKVESDSEDQSVKS-IPVNTVIHNSRNQWR-KETKLYYPRATAPDLLLEESSNFKSFS 496
G E +SE + K + ++V+ + WR K K +A L LEE + + S
Sbjct: 240 GTGYPEEESEKKHGKDQLLPSSVVGDGGASWRMKALKRAKEQAAREGLRLEEVAGERYGS 299
Query: 497 ANNVYE 502
N+ E
Sbjct: 300 LGNLVE 305
>At1g21580 hypothetical protein
Length = 1696
Score = 30.8 bits (68), Expect = 2.9
Identities = 40/168 (23%), Positives = 66/168 (38%), Gaps = 17/168 (10%)
Query: 28 KANVIVPKTIQWSDITLPDKWSLEKAAPAQPVETPEFREIIQHQSGQVDLIFDRRNSFSI 87
K+NV+V K + P + A P R ++ ++ +V + +R
Sbjct: 387 KSNVLVAKPV-----ASPTSAGIRSGASVTPRSIKARRALLSDKNEKVS-VTERNGKLGT 440
Query: 88 PRS--IRTSSDFQSAMSRRSFSMSRRNQPESSARPSLSHEGSTIHLAGYVN----TTPVK 141
S I S F+ + +R++ + +P+S + PS S G ++ +VN + VK
Sbjct: 441 HLSDEISVSEGFRRS-TRQTTASKNEKEPDSHSTPSSSDSGGKLNKVRFVNGVVQDSKVK 499
Query: 142 TTYDKSDEDHQSTLSPTYSSLETPGETSDFIG---AITTEFVIDKEGI 186
T D E S ET E D I I TE +EG+
Sbjct: 500 LT-DSGPEASTHDTEKISSFCETLIEAKDDINVKHGINTEACSTEEGV 546
>At5g08430 putative protein
Length = 509
Score = 30.4 bits (67), Expect = 3.8
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 383 KELLQKVVEQLQLLNQVIPETPEPTPEAVSNPAVSAPAPPKTRTSTRNTSTSLNNIED 440
+ELLQ EQ +LL +V E E V NP VS+P K+ R + + L+ I +
Sbjct: 265 RELLQNPDEQARLLREVPEVIGE---ELVQNPEVSSPEAHKSDNEQRLSESPLSCIHE 319
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,941,300
Number of Sequences: 26719
Number of extensions: 812528
Number of successful extensions: 2730
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2710
Number of HSP's gapped (non-prelim): 57
length of query: 751
length of database: 11,318,596
effective HSP length: 107
effective length of query: 644
effective length of database: 8,459,663
effective search space: 5448022972
effective search space used: 5448022972
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0220.1