Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0218.18
         (330 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g19650 unknown protein                                             147  8e-36
At1g20920 putative RNA helicase                                        60  1e-09
At3g28770 hypothetical protein                                         57  2e-08
At5g53440 putative protein                                             56  2e-08
At5g57370 unknown protein                                              55  7e-08
At3g50670 U1 snRNP 70K protein                                         55  7e-08
At1g60900 putative U2 snRNP auxiliary factor                           55  7e-08
At4g09980 unknown protein                                              54  1e-07
At3g23900 unknown protein                                              52  3e-07
At2g16940 splicing factor  like protein                                51  8e-07
At3g49600 putative protein                                             51  1e-06
At1g70620 unknown protein                                              51  1e-06
At5g16780 putative protein                                             50  1e-06
At3g26560 ATP-dependent RNA helicase, putative                         49  3e-06
At2g18540 putative vicilin storage protein (globulin-like)             49  3e-06
At4g37820 unknown protein                                              49  5e-06
At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA he...    47  1e-05
At4g36690 splicing factor like protein                                 47  2e-05
At3g47270 putative protein                                             46  2e-05
At2g29210 proline-rich protein like                                    46  2e-05

>At3g19650 unknown protein
          Length = 302

 Score =  147 bits (371), Expect = 8e-36
 Identities = 124/336 (36%), Positives = 164/336 (47%), Gaps = 50/336 (14%)

Query: 4   RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRD-RDRVTTNGGGG 62
           RDSD +   S+ DREPSPKR RRDGK + ER           S++  D RD   T     
Sbjct: 8   RDSDPRRHRSRIDREPSPKRSRRDGKPEAERVL---------SKKDLDVRDGTDTEKNSR 58

Query: 63  AGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPK---HSAQPPRSRSYYQHAE 119
                 P + D         S+++S    +KK + H E  K   H +Q PRSR Y QH +
Sbjct: 59  QSLRDAPLELDAHG------SRKDS----EKKHSGHHETTKAAPHLSQVPRSRPYSQHDD 108

Query: 120 RGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLH--RRDGS 177
           R +  +V R   R  +   ++  S++ S R      R   DEKSQ + D++    R D  
Sbjct: 109 RRSDGKVDR---RPTSVRGSWRSSRDQSNR------RAGDDEKSQHRKDEDKSSWRHDRF 159

Query: 178 PERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNP 237
            E  D   + +RKRPAFREKKI  ++G+      TE  K ++ +     N R+ ER+   
Sbjct: 160 RESDDTQGALSRKRPAFREKKIAEETGNNTDRTRTEDGKDTNLN-----NRRQNERNWRS 214

Query: 238 R-HLERHEKQIAG-DRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKT 295
             H ERHE+   G DR  NR + R  G  SR  Y        DR R   N R G+    T
Sbjct: 215 NTHSERHERPAMGRDRVWNRDDER--GAGSRQSYQA------DRDRFNGNGRSGFSGSWT 266

Query: 296 RTEK-WKHDLFQEADNDPVPKNEDDQIAKLEALLAS 330
           R EK W HDLF EA+  P    E++QIAK+EALLAS
Sbjct: 267 RNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302


>At1g20920 putative RNA helicase
          Length = 1166

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 75/342 (21%), Positives = 132/342 (37%), Gaps = 52/342 (15%)

Query: 4   RDSDSKLRHSKFDREPSPKR------YRRDGKQDRERDRDRDRERERGSERGRDRDRVTT 57
           +D  S+ R  K  R+   K       Y RD  ++RE+ ++++RER R     RD+DRV  
Sbjct: 37  KDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR-----RDKDRVKR 91

Query: 58  NGGGGAGGD--QNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY 115
                   D   +  + D+R+        +  V   ++   +H+       +  R R   
Sbjct: 92  RSERRKSSDSEDDVEEEDERD--------KRRVNEKERGHREHERDRGKDRKRDREREER 143

Query: 116 QHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEK--SQAKLDDNLHR 173
           +  ER   +   R    RE   K   + +E  ER +  + R +R+++  S+   +    R
Sbjct: 144 KDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSR 203

Query: 174 RDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPP----ERNER 229
             G+ E  DD      KR   R +K  G+  +     S  R  + H D P     E N  
Sbjct: 204 EVGNEESDDDV-----KRDLKRRRKEGGERKEKEREKSVGR-SSRHEDSPKRKSVEDNGE 257

Query: 230 KEERSGNPRHLERHEKQIAGDRAPNRSE-------GRRDGFSSRARYGGSGGNNNDRGR- 281
           K+E+      LE  +K++  +    R          R+   +     G + GN    G+ 
Sbjct: 258 KKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKA 317

Query: 282 ----DKFNARQGYHPIKTRTEKWKHDLFQEADNDPVPKNEDD 319
                + +  +G+   K+ TE        + D +  P+N+ D
Sbjct: 318 WTLEGESDDEEGHPEEKSETE-------MDVDEETKPENDGD 352



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 21/229 (9%)

Query: 29  KQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESV 88
           K  R+RDR  +R++++GSE+ R++DR           D    D D+         ++   
Sbjct: 24  KSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR 83

Query: 89  GAGD--------KKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAF 140
              D        +KS+D ++  +   +  R +      ERG+ E   R  G+     +  
Sbjct: 84  RDKDRVKRRSERRKSSDSEDDVEE--EDERDKRRVNEKERGHREH-ERDRGKDRKRDRER 140

Query: 141 AQSKENSERVETSQSREQRD----EKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFRE 196
            + K+     E  + R +R+    EK + K  +   R DG  +R++       +R   RE
Sbjct: 141 EERKDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERE 200

Query: 197 KKIQGDSGDANPAVSTERVKASHTDHPPERNERKE-ERSGNPRHLERHE 244
           +     S +     S + VK        E  ERKE ER  +     RHE
Sbjct: 201 R-----SREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHE 244



 Score = 38.9 bits (89), Expect = 0.004
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 6/141 (4%)

Query: 150 VETSQSREQRDE--KSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDAN 207
           VE S+ R +  +  + +A L  +   RD S ERK D  S  R+    R+K+++  S D+ 
Sbjct: 3   VEKSKYRSEDLDVVEEEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVK--SSDSE 60

Query: 208 PAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRA 267
                +  +        ER  R+ ++    R  ER +   + D      E  RD      
Sbjct: 61  DDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDV--EEEDERDKRRVNE 118

Query: 268 RYGGSGGNNNDRGRDKFNARQ 288
           +  G   +  DRG+D+   R+
Sbjct: 119 KERGHREHERDRGKDRKRDRE 139



 Score = 32.3 bits (72), Expect = 0.37
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 134 EAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPA 193
           EA  K   + ++ S   +  +  E+R EK + K        +   +R DD     RK   
Sbjct: 19  EADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKE 78

Query: 194 FREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAP 253
              ++   D         +ER K+S ++   E  + +++R  N +  ER  ++   DR  
Sbjct: 79  RERRRRDKDRVKRR----SERRKSSDSEDDVEEEDERDKRRVNEK--ERGHREHERDRGK 132

Query: 254 NRSEGR 259
           +R   R
Sbjct: 133 DRKRDR 138


>At3g28770 hypothetical protein
          Length = 2081

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 68/325 (20%), Positives = 137/325 (41%), Gaps = 32/325 (9%)

Query: 7    DSKLRHSKFDREPSPKRYRRDGKQDRERDRD-RDRERERGSERGRDRDRVTTNGGGGAGG 65
            D+K   S  +R+ + +R   D K+D+E  +D +  E +  +E G     V TN     G 
Sbjct: 803  DNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGG----VDTN----VGN 854

Query: 66   DQNPTD-RDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPR--SRSYYQHAERGN 122
             ++  D +D R++    + K+ES+    KK  + Q   K S +  R  + +     ++G+
Sbjct: 855  KEDSKDLKDDRSVEVKAN-KEESM---KKKREEVQRNDKSSTKEVRDFANNMDIDVQKGS 910

Query: 123  TEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKD 182
             E V      ++ G K     +EN + + TS  ++ +D+K + K   N + +    ++K+
Sbjct: 911  GESVKYKKDEKKEGNK-----EENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKE 965

Query: 183  DPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERK--EERSGNPRHL 240
               +  +K+   +++  + ++          + K    D   +  E+K  EE+    +  
Sbjct: 966  YVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEE 1025

Query: 241  ERHEKQIAGD--RAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTE 298
             + EK+ + D  R    SE R+                 +  ++K  +    H  K + +
Sbjct: 1026 AKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESEN--HKSKKKED 1083

Query: 299  KWKHDLFQEADNDPVPKNEDDQIAK 323
            K +H+     DN  + K ED +  K
Sbjct: 1084 KKEHE-----DNKSMKKEEDKKEKK 1103



 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 62/327 (18%), Positives = 127/327 (37%), Gaps = 38/327 (11%)

Query: 11   RHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPT 70
            + S  D++   K  + D K D+  D  ++  +  G E  +D   V   G      +   T
Sbjct: 703  KDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGE-SKDDKSVEAKGKKKESKENKKT 761

Query: 71   DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
              ++  +     +K+E+V    K+S   ++  K  ++  +S       E  + +++  + 
Sbjct: 762  KTNENRV----RNKEENVQGNKKESEKVEKGEKKESKDAKS------VETKDNKKLSSTE 811

Query: 131  GRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTR- 189
             R EA  ++   +KE+ E  +  QS E +++     +D N+  ++ S + KDD     + 
Sbjct: 812  NRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKA 871

Query: 190  -KRPAFREKKIQGDSGDANPAVSTERV------------KASHTDHPPERNERKE-ERSG 235
             K  + ++K+ +    D +   ST+ V            K S      +++E+KE  +  
Sbjct: 872  NKEESMKKKREEVQRNDKS---STKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEE 928

Query: 236  NPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKT 295
            N   +    KQ   D+   + E +      +           D+     N  +     K 
Sbjct: 929  NKDTINTSSKQKGKDKKKKKKESKNSNMKKK---------EEDKKEYVNNELKKQEDNKK 979

Query: 296  RTEKWKHDLFQEADNDPVPKNEDDQIA 322
             T K ++   +E + D   K E +  A
Sbjct: 980  ETTKSENSKLKEENKDNKEKKESEDSA 1006



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 45/254 (17%), Positives = 105/254 (40%), Gaps = 20/254 (7%)

Query: 22   KRYRRDGKQDRERDRDRDRERERGSE--RGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPP 79
            K+ +++ K    + ++ D++    +E  +  D  + TT        ++N  +++++    
Sbjct: 945  KKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESED 1004

Query: 80   PPHSKQESVGAGDKKSNDHQEPPKHSAQPP-RSRSYYQHAERGNTEQVGRS----AGRRE 134
                 +E     +KKS   +E  K   +   + R      ER + ++   S    A ++E
Sbjct: 1005 SASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKE 1064

Query: 135  AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAF 194
               K   +S EN +  +    +E  D KS  K +D         E+K    S +RK+   
Sbjct: 1065 EETKEKKES-ENHKSKKKEDKKEHEDNKSMKKEED-------KKEKKKHEESKSRKKEED 1116

Query: 195  RE--KKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRA 252
            ++  +K++  + +       E+ K+ H     + +++KE++    +      K+I   ++
Sbjct: 1117 KKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEK---SETKEIESSKS 1173

Query: 253  PNRSEGRRDGFSSR 266
                  +++  SS+
Sbjct: 1174 QKNEVDKKEKKSSK 1187



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 53/345 (15%), Positives = 128/345 (36%), Gaps = 38/345 (11%)

Query: 4    RDSDSKLRHSKFD----REPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRD-RVTTN 58
            +D   K + SK      +E   K Y  +  + +E ++    + E    +  ++D +    
Sbjct: 942  KDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKE 1001

Query: 59   GGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQ-EPPKHSAQPPRSRSYYQH 117
                A  ++   + +++       +K+E   + DKK  +   E  K   +   SR     
Sbjct: 1002 SEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK 1061

Query: 118  AERGNTEQVGRSAGRREAGGKAFAQSKENS------ERVETSQSREQR------DEKSQA 165
             +   T++   S   +    +   + ++N       ++ E  +  E +      D+K   
Sbjct: 1062 KKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDME 1121

Query: 166  KLDD---NLHRRDGSPERKDDPPSNTRKRPAFREKK----------IQGDSGDANPAVST 212
            KL+D   N  + D + ++K       +K    +EKK          I+      N     
Sbjct: 1122 KLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKK 1181

Query: 213  ERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRR-------DGFSS 265
            E+  +       E+  ++ E     ++ E  +KQ + +    + E ++       D  ++
Sbjct: 1182 EKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNT 1241

Query: 266  RARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHDLFQEADN 310
              + GG   +     ++  N ++     +  +++ K+++  +AD+
Sbjct: 1242 TKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADS 1286



 Score = 33.5 bits (75), Expect = 0.16
 Identities = 42/240 (17%), Positives = 85/240 (34%), Gaps = 36/240 (15%)

Query: 29  KQDRERDRDRDRE--RERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQE 86
           K+ RE  +  + E  +    E   D+  +  +   GA  +   +  ++R      H    
Sbjct: 583 KEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGHDNSI 642

Query: 87  SVGAGDKK---SNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQS 143
           +    D K   ++ ++E   H        +     +  +  +V ++ G  E G +    +
Sbjct: 643 NSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENN 702

Query: 144 KENSERVETSQSREQRDEKSQAKLDD----------------NLHRRDGSPERKDDPPSN 187
           K++ E  +      Q D K    +DD                ++  +    E K++  + 
Sbjct: 703 KDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTK 762

Query: 188 TRK-RPAFREKKIQG--------------DSGDANPAVSTERVKASHTDHPPERNERKEE 232
           T + R   +E+ +QG              +S DA    + +  K S T++  E  ER  E
Sbjct: 763 TNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGE 822


>At5g53440 putative protein
          Length = 1181

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 46/202 (22%), Positives = 81/202 (39%), Gaps = 32/202 (15%)

Query: 11  RHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPT 70
           R+  +DRE       R+  +DR+RD +RDR+R+R  +R RDRDR                
Sbjct: 305 RNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDR---------------- 348

Query: 71  DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
            RD  +     H +         +  DH+    H  +  RSR YY   +R  ++      
Sbjct: 349 -RDYEH--DRYHDRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSD------ 399

Query: 131 GRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSN-TR 189
            R     +  ++  + S R      +++RD +      D      GS   + +P  + TR
Sbjct: 400 -RERDNDRDVSRLDDQSGRY-----KDRRDGRRSPDYQDYQDVITGSRSSRVEPDGDMTR 453

Query: 190 KRPAFREKKIQGDSGDANPAVS 211
                    +Q ++G+A+  ++
Sbjct: 454 PERQLSSSVVQEENGNASDQIT 475



 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 84/357 (23%), Positives = 131/357 (36%), Gaps = 49/357 (13%)

Query: 3   HRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDR----VTTN 58
           +  S SK R  K     S    R +GK D + +  +  + +  SE+ R RD      T  
Sbjct: 68  YTSSSSKRRKGKSGESGSD---RWNGKDDDKGESSK--KTKVSSEKSRKRDEGDGEETKK 122

Query: 59  GGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDK--KSNDHQEPPKHSAQPPRSRSYYQ 116
             G + G    + R +         ++   G  DK    +DH    K  A   ++ S  Q
Sbjct: 123 SSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHH---KSKAGSDKTESKAQ 179

Query: 117 -HAERGNTEQVGRSAGRRE-----AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDN 170
            HA    TE       RR+      G K    S +  +RV TS     +D K + +   +
Sbjct: 180 DHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRD 239

Query: 171 LHRRDGSPE--------RKDDPPSN-------------TRKRPAFREKKIQGDSGDANPA 209
            +R D   E        ++DD P+              ++K+  F++    G   D+   
Sbjct: 240 KYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDND-HGHEPDSELD 298

Query: 210 VSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARY 269
              ER +    D   +RNER  ER+ +       ++    DR   R   RRD +     +
Sbjct: 299 GYHERERNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDRRD-YEHDRYH 357

Query: 270 GGSGGNNNDRGRDKFNARQGYHP-IKTRTEKWKHD-----LFQEADNDPVPKNEDDQ 320
                 +  R RD+ + R   H   K R+  + HD       +E DND      DDQ
Sbjct: 358 DRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQ 414



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 43/218 (19%), Positives = 80/218 (35%), Gaps = 8/218 (3%)

Query: 89  GAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSE 148
           G+GDK+   +        +   S S  +   +       R  G+ +  G++  ++K +SE
Sbjct: 48  GSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSE 107

Query: 149 RVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANP 208
           +       +  + K  +   D  HR     E KD      RK    +  K          
Sbjct: 108 KSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKS 167

Query: 209 AVSTERVKASHTDH--PPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDG-FSS 265
              +++ ++   DH   P      E+RS   R     +    GD+  + S+   D   +S
Sbjct: 168 KAGSDKTESKAQDHARSPGTENYTEKRSRRKR-----DDHGTGDKHHDNSDDVGDRVLTS 222

Query: 266 RARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHD 303
              Y   G +  ++ RDK+   +    IK + +K + D
Sbjct: 223 GDDYIKDGKHKGEKSRDKYREDKEEEDIKQKGDKQRDD 260


>At5g57370 unknown protein
          Length = 219

 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 51/187 (27%), Positives = 77/187 (40%), Gaps = 42/187 (22%)

Query: 1   MSHRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGG 60
           MS RD   + R    D++  P R RR G+ DR+RDRDRDRER+R  ER RDR        
Sbjct: 1   MSERDRRERER----DKDREPDRDRRRGRDDRDRDRDRDRERDR--ERDRDR-------- 46

Query: 61  GGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAER 120
               G +N   R                     ++ DH    +H   P R RS  +  +R
Sbjct: 47  ----GLRNKKSR--------------------SRTPDHHARARHVRSPERYRSRSRSIDR 82

Query: 121 GNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPER 180
                  R   RR     A ++ +     V+  + R ++   + + +D+N        ++
Sbjct: 83  DRDRDRQRHHRRRSPSPDAPSRKRPRQGSVDDEKERNRKRVVTDS-VDEN---ASTITKK 138

Query: 181 KDDPPSN 187
           KD  PS+
Sbjct: 139 KDKQPSD 145


>At3g50670 U1 snRNP 70K protein
          Length = 427

 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 42/143 (29%), Positives = 66/143 (45%), Gaps = 15/143 (10%)

Query: 17  REPSPKRYRRDGKQDRERD--RDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQ 74
           RE    R R  G +DR+RD  RDRDR R+RG    RDRDR     G       +  DR +
Sbjct: 295 REDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDR-----GRDRTSRDHDRDRSR 349

Query: 75  RNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRRE 134
           +        + E  G G  +  D     ++  +P  +R YY+  ++G+T++      + E
Sbjct: 350 KKERDYEGGEYEHEGGGRSRERD----AEYRGEPEETRGYYED-DQGDTDRYSHRYDKME 404

Query: 135 AGGKAFAQSKENSERVETSQSRE 157
                + +  + S+R   S+SRE
Sbjct: 405 EDDFRYEREYKRSKR---SESRE 424



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 18/221 (8%)

Query: 27  DGKQ---DRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPP--PP 81
           DG++   D ER R     R R    G    RV   GG    G+Q P  R  ++  P  P 
Sbjct: 205 DGRRVLVDVERGRTVPNWRPRRLGGGLGTSRV--GGGEEIVGEQQPQGRTSQSEEPSRPR 262

Query: 82  HSKQESVGAGDKKSND----HQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGG 137
             +++S   G ++       H++P + S   PR   +++  ++G  ++   S   R+   
Sbjct: 263 EEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTR 322

Query: 138 KAFAQSKENSERVETSQSREQRDEKSQAKLDD----NLHRRDGSPERKDDPPSNTRKRPA 193
               + + + +R     SR+   ++S+ K  D          G   R+ D  +  R  P 
Sbjct: 323 DRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGGRSRERD--AEYRGEPE 380

Query: 194 FREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERS 234
                 + D GD +   S    K    D   ER  ++ +RS
Sbjct: 381 ETRGYYEDDQGDTD-RYSHRYDKMEEDDFRYEREYKRSKRS 420



 Score = 32.3 bits (72), Expect = 0.37
 Identities = 35/167 (20%), Positives = 63/167 (36%), Gaps = 11/167 (6%)

Query: 18  EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDR----DRVTTNGGGGAGGDQNPTDRD 73
           E  P+      ++      +R++ RE+G ER R R    ++           D++  DRD
Sbjct: 245 EQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRD 304

Query: 74  QRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQH-AERGNTEQVGRSAGR 132
           Q        S+++     D+   D ++  +      R R+   H  +R   ++     G 
Sbjct: 305 QGGRDRDRDSRRDRDRTRDRGDRDRRDRDR-----GRDRTSRDHDRDRSRKKERDYEGGE 359

Query: 133 REAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPE 179
            E  G   ++ ++   R E  ++R    E  Q   D   HR D   E
Sbjct: 360 YEHEGGGRSRERDAEYRGEPEETRGYY-EDDQGDTDRYSHRYDKMEE 405


>At1g60900 putative U2 snRNP auxiliary factor
          Length = 589

 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 45/174 (25%), Positives = 77/174 (43%), Gaps = 20/174 (11%)

Query: 3   HRDSDSKLRH------SKFDREPSPKRYRRDGKQDRERDRDRDRE--RERGSERGRDRDR 54
           H DS S+  H      SK   + +     +DG +DR+R++DRDRE  R+R  E+ RDRDR
Sbjct: 31  HEDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDR 90

Query: 55  VTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSY 114
                      D+  +   QR+       +  S    +K+ +   +  + S    R RS 
Sbjct: 91  -----------DRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSR 139

Query: 115 YQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
            +  E  +  +  RS  R  +  ++ ++ +  SE    S+SR +   K ++  D
Sbjct: 140 DRDREVRHRRR-SRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFD 192



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 23/186 (12%)

Query: 18  EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNL 77
           E SP       ++  +  +D  +  E+ +E GRD+D                 DRD+   
Sbjct: 26  ESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKD--------------GNKDRDREK- 70

Query: 78  PPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGG 137
                 +++S     +KS D     + S    R R    H +R       RS  R +   
Sbjct: 71  ---DRDREKSRDRDREKSRDRDRDRERSKDRQRDR---HHRDRHRDRSRERSEKRDDLDD 124

Query: 138 KAFAQSKENSERVETSQSREQRD-EKSQAKLDDNLHRRDGSPER-KDDPPSNTRKRPAFR 195
               +S++   R    + RE R   +S+++      RR  S  R K +  S +R R   +
Sbjct: 125 DHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSK 184

Query: 196 EKKIQG 201
            K+  G
Sbjct: 185 SKRRSG 190



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 42/144 (29%), Positives = 59/144 (40%), Gaps = 27/144 (18%)

Query: 143 SKENSERVETSQSREQRD-EKSQAKLD--DNLHRRDGSPERKDDPPSNTRKRPAFREKKI 199
           S E+S   E S+SRE  D +K  +K+   DN + RD     KD      R++   REK  
Sbjct: 24  SLESSPFHEDSKSRESHDLKKDSSKISEKDNENGRD-----KDGNKDRDREKDRDREK-- 76

Query: 200 QGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGR 259
                      S +R +    D   +R ER ++R  +  H +RH      DR+  RSE R
Sbjct: 77  -----------SRDRDREKSRDRDRDR-ERSKDRQRDRHHRDRHR-----DRSRERSEKR 119

Query: 260 RDGFSSRARYGGSGGNNNDRGRDK 283
            D      R          R RD+
Sbjct: 120 DDLDDDHHRRSRDRDRRRSRDRDR 143



 Score = 32.3 bits (72), Expect = 0.37
 Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 14/161 (8%)

Query: 141 AQSKENSERVETSQSREQRDEKSQAKLDDNLHR-----RDGSPER-KDDPPSNTRKRPAF 194
           ++S+E+ +  + S    ++D ++    D N  R     RD    R +D   S  R R   
Sbjct: 34  SKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRE 93

Query: 195 REKKIQGD--SGDANPAVSTERVKAS---HTDHPPERNERKEERSGNPRHLERHEKQIAG 249
           R K  Q D    D +   S ER +       DH     +R   RS +     RH ++   
Sbjct: 94  RSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRR--- 150

Query: 250 DRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGY 290
            R+ +RS   R   S           +  R R K   R G+
Sbjct: 151 SRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGF 191


>At4g09980 unknown protein
          Length = 963

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 65/293 (22%), Positives = 104/293 (35%), Gaps = 27/293 (9%)

Query: 2   SHRDSDSKLRHSKFDREPSPKR----------YRRDGKQDRERDRDRDRERERGS---ER 48
           S RD  SK R  K D   SP +           R  G+ +R +  D D E+E+ S   ER
Sbjct: 142 SSRDEKSKSRGVKDDDRGSPLKKTSGKDGSEVVREVGRSNRSKTPDADYEKEKYSRKDER 201

Query: 49  GRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQP 108
            R RD              +  DRDQ  L      +  S G  D+K  D         + 
Sbjct: 202 SRGRD-----------DGWSDRDRDQEGLKDNWKRRHSSSGDKDQKDGDLLYDRGREREF 250

Query: 109 PRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
           PR        ER +    GR  G R    KA +    ++E  +  + + +  +  + +  
Sbjct: 251 PRQGRERSEGERSHGRLGGRKDGNRGEAVKALSSGGVSNENYDVIEIQTKPHDYVRGESG 310

Query: 169 DNLHRRDGSPERKDDPPSNTRKRPAF-REKKIQGDSGDANPAVSTERVKASHTDHPPERN 227
            N  R   S ++    PSN  +  A  +E + + ++          R +A          
Sbjct: 311 PNFARMTESGQQPPKKPSNNEEEWAHNQEGRQRSETFGFGSYGEDSRDEAGEASSDYSGA 370

Query: 228 ERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRG 280
           + + +R   P      +    G + P  + G R     + R   +GG  N +G
Sbjct: 371 KARNQRGSTPGRTNFVQTPNRGYQTPQGTRGNRPLRGGKGR--PAGGRENQQG 421



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 62/285 (21%), Positives = 118/285 (40%), Gaps = 48/285 (16%)

Query: 30  QDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVG 89
           QD E+D     E+ R S +  D +  + +GG       + +  D +++    H  ++S  
Sbjct: 18  QDGEQDGGDRSEKRRMSLKASDFESSSRSGG-------SKSKEDNKSVVDVEHQDRDS-- 68

Query: 90  AGDKKSNDHQEPPKHSAQPPRSRSYYQHA----ERGNTEQVGRSAGRREAGGKAFAQSKE 145
              K+  D +E    S+     R  +  A      G+ +    S  R ++GG+  + S E
Sbjct: 69  ---KRERDGRERTHGSSSDSSKRKRWDEAGGLVNDGDHKSSKLSDSRHDSGGERVSVSNE 125

Query: 146 NSE-----RVETSQSREQRDEKSQAK--LDDN-------LHRRDGSPERKDDPPSNTRKR 191
           + E     + + S     RDEKS+++   DD+          +DGS   ++   SN  K 
Sbjct: 126 HGESRRDLKSDRSLKTSSRDEKSKSRGVKDDDRGSPLKKTSGKDGSEVVREVGRSNRSKT 185

Query: 192 P---------AFREKKIQG-DSGDANPAVSTERVKASHTDHPPERNERKEERS------G 235
           P         + ++++ +G D G ++     E +K +         ++ ++        G
Sbjct: 186 PDADYEKEKYSRKDERSRGRDDGWSDRDRDQEGLKDNWKRRHSSSGDKDQKDGDLLYDRG 245

Query: 236 NPRHLERHEKQIA-GDRAPNRSEGRRDGFSSRA-RYGGSGGNNND 278
             R   R  ++ + G+R+  R  GR+DG    A +   SGG +N+
Sbjct: 246 REREFPRQGRERSEGERSHGRLGGRKDGNRGEAVKALSSGGVSNE 290


>At3g23900 unknown protein
          Length = 989

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 66/258 (25%), Positives = 100/258 (38%), Gaps = 41/258 (15%)

Query: 4   RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGA 63
           +  D +L+H K   + S  R R D  + R+  R+ D  +++  +R R R     N     
Sbjct: 671 KSRDEELKHHK---KRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDN----- 722

Query: 64  GGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNT 123
            G     D  Q N     HSK+ S      KS D     K      RSRS          
Sbjct: 723 -GSHENVDVAQDNDLNSRHSKRRS------KSLDEDYDMKERRGRSRSRSL--------- 766

Query: 124 EQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD 183
                     E   ++  ++K + +R   S+ R  R +  + K   N   R  S ++K  
Sbjct: 767 ----------ETKNRSSRKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETR--SRDKKSK 814

Query: 184 PPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERH 243
             S  R R    E K QG    ++P  S E+ K+ H  H   R+  K+  S + R  +RH
Sbjct: 815 RRSGRRSRSPSSEGK-QGRDIRSSPGYSDEK-KSRHKRHSRSRSIEKKNSSRDKRS-KRH 871

Query: 244 EKQIAGDRAPNRSEGRRD 261
           E+      +P R + R D
Sbjct: 872 ER--LRSSSPGRDKRRGD 887



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 58/283 (20%), Positives = 106/283 (36%), Gaps = 39/283 (13%)

Query: 11  RHSKFDREPSPKRYRR----DGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGD 66
           R  +  R  SP RY+R    +G++   RD  RD    R   R  +    ++         
Sbjct: 541 RRPRSHRSRSPLRYQRRSTYEGRRRSYRD-SRDISESRRYGRSDEHHSSSSRRSRSVSPK 599

Query: 67  QNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTE-Q 125
           +  + ++   L      +++S   G+KKS+      +  ++ PR R   +   R + E +
Sbjct: 600 KRKSGQEDSELS---RLRRDSSSRGEKKSS------RAGSRSPRRRKEVKSTPRDDEENK 650

Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
           V R    R    +  A  K+ S   E    +++   +S+   +D    RD S   ++   
Sbjct: 651 VKRRTRSRSRSVEDSADIKDKSRDEELKHHKKRSRSRSR---EDRSKTRDTS---RNSDE 704

Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEK 245
           +  + R   R + ++ D+G             SH     E  +  ++   N RH +R  K
Sbjct: 705 AKQKHRQRSRSRSLENDNG-------------SH-----ENVDVAQDNDLNSRHSKRRSK 746

Query: 246 QIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQ 288
            +  D       GR    S   +   S  N  D  R+  + R+
Sbjct: 747 SLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRR 789



 Score = 34.3 bits (77), Expect = 0.096
 Identities = 28/97 (28%), Positives = 42/97 (42%), Gaps = 9/97 (9%)

Query: 7   DSKLRHSKFDREPSPKRYRRDGKQDRERD-RDRDRERERGSERGRDRDRVTTNGGGGAGG 65
           + K RH +  R  S +      K++  RD R +  ER R S  GRD+ R   +    +  
Sbjct: 843 EKKSRHKRHSRSRSIE------KKNSSRDKRSKRHERLRSSSPGRDKRRGDRSLSPVSSE 896

Query: 66  DQNPTDRDQ--RNLPPPPHSKQESVGAGDKKSNDHQE 100
           D     R    +++   PHS  E V  GD  S+  Q+
Sbjct: 897 DHKIKKRHSGSKSVKEKPHSDYEKVDDGDANSDSSQQ 933


>At2g16940 splicing factor  like protein
          Length = 561

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 3   HRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGG 62
           HR    K R    D +   +R +R     R R RDR+R+R R S   RDRDR        
Sbjct: 44  HRGDKKKER----DEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDR-------- 91

Query: 63  AGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERG- 121
               +   D+++RN       + +     D K  DH++     ++    R   Q  E+  
Sbjct: 92  ----EKDVDKEERNGKDRERDRDKD---RDSKGRDHEKDRSRRSRSRSERHRSQEREKSL 144

Query: 122 NTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQR 159
             E   R    R+   +     KE+    E    R+QR
Sbjct: 145 EIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 44/180 (24%), Positives = 72/180 (39%), Gaps = 17/180 (9%)

Query: 81  PHSKQE-SVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKA 139
           PH + E   G GD+K          S    RSRS     ++   E+     GRR    ++
Sbjct: 16  PHLENEVGNGGGDEKVK--------SEGKERSRSSRHRGDK-KKERDEDEDGRRSKRSRS 66

Query: 140 FAQSKENS-ERVETSQSREQRDEKSQAKLD-DNLHRRDGSPERKDDPPSNTRKRPAFREK 197
             +S+    ER     SRE RD   +  +D +  + +D   +R  D  S  R     R +
Sbjct: 67  HHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSR 126

Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSE 257
           + +  S       S ER K+   +  P+  E K+      RH ++ E ++  +  P R +
Sbjct: 127 RSRSRSERHR---SQEREKSLEIE--PKERETKDRDRDRRRHKDKKEDKVEPEADPERDQ 181



 Score = 35.8 bits (81), Expect = 0.033
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 19/124 (15%)

Query: 137 GKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFRE 196
           G      K  SE  E S+S   R +K + + +D     DG   ++      +R R   R+
Sbjct: 23  GNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDE----DGRRSKRSRSHHRSRSRDRERD 78

Query: 197 KKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRS 256
           +                R    H D   E++  KEER+G  R  +R + + +  R   + 
Sbjct: 79  R---------------HRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKD 123

Query: 257 EGRR 260
             RR
Sbjct: 124 RSRR 127


>At3g49600 putative protein
          Length = 1672

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 64/327 (19%), Positives = 129/327 (38%), Gaps = 32/327 (9%)

Query: 5   DSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAG 64
           D D   RH K   + S KR   D  +  E  RDR R R +   +GR ++  + +    + 
Sbjct: 206 DVDVVKRHKK---KESKKRRHDDSSESDEHGRDR-RRRSKKKAKGRKQESESDSSSSDSE 261

Query: 65  GDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTE 124
            D +  D  +R    P  +K     +  K+S   +     S    + R  ++ +   N  
Sbjct: 262 SDSDSDDGKKRGRKKP--TKTTKKRSRRKRSVSSESEEVESDDSKKLRKSHKKSLPSN-- 317

Query: 125 QVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD- 183
                +G +E   K   QS+   +R ++  S  + ++  Q         R G  +++DD 
Sbjct: 318 ----RSGSKELRDKHDEQSRAGRKRHDSDVSEPESEDNKQPLRKKEEAYRGGQKQKRDDE 373

Query: 184 --PPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTD-HPPERNERKEERSGNPRH- 239
                + + R    +KK   DS D+      ++   S  + +    +++++E     +H 
Sbjct: 374 DVEADHLKDRYTRDDKKAARDSDDSEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHG 433

Query: 240 -----LERHEKQIAGD------RAPNRSEGRRDGFSSRARYGGSGGNNND-RGRDKF--- 284
                 +   K++A D         NR + + + +    ++      +ND  GRD++   
Sbjct: 434 KDKYRSDSRGKEVARDSDDSEAEYENRKKLKNESYQRGRKHKREEDEDNDNHGRDRYRGD 493

Query: 285 NARQGYHPIKTRTEKWKHDLFQEADND 311
           +A + Y  IK   ++++    +E  +D
Sbjct: 494 DAVKRYGTIKEDDDRYRGRAIEEEGDD 520



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 77/352 (21%), Positives = 126/352 (34%), Gaps = 49/352 (13%)

Query: 3   HRDSDSKLRHSKFDREPSPKRYRRDGKQ---------DRERDRDRDRERERGSERGRDRD 53
           H DS     H + DR    K+  +  KQ         D E D D D  ++RG ++     
Sbjct: 223 HDDSSESDEHGR-DRRRRSKKKAKGRKQESESDSSSSDSESDSDSDDGKKRGRKKPTKTT 281

Query: 54  RVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQ-ESVGAGDKKSNDHQEPPKHSAQPPRSR 112
           +  +        +    + D        H K   S  +G K+  D  +    + +  R  
Sbjct: 282 KKRSRRKRSVSSESEEVESDDSKKLRKSHKKSLPSNRSGSKELRDKHDEQSRAGR-KRHD 340

Query: 113 SYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETS--QSREQRDEKSQAKLDDN 170
           S     E  + +Q  R       GG+   + K + E VE    + R  RD+K  A+  D+
Sbjct: 341 SDVSEPESEDNKQPLRKKEEAYRGGQ---KQKRDDEDVEADHLKDRYTRDDKKAARDSDD 397

Query: 171 ----------------LHRRDGSPERKDDPPSNTRKRPAFRE----KKIQGDSGDANPAV 210
                           ++    S +RK++       +  +R     K++  DS D+  A 
Sbjct: 398 SEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHGKDKYRSDSRGKEVARDSDDSE-AE 456

Query: 211 STERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNR-SEGRRDGFSSRARY 269
              R K  +  +   R  ++EE   N  H      +  GD A  R    + D    R R 
Sbjct: 457 YENRKKLKNESYQRGRKHKREEDEDNDNH---GRDRYRGDDAVKRYGTIKEDDDRYRGRA 513

Query: 270 GGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKH--DLFQEADNDPVPKNEDD 319
               G ++DRGR     R     +K   E++KH  D ++        K +DD
Sbjct: 514 IEEEG-DDDRGR----YRPRRESVKDDEEEYKHGRDRYRGDGRRATGKEDDD 560


>At1g70620 unknown protein
          Length = 897

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 55/242 (22%), Positives = 96/242 (38%), Gaps = 31/242 (12%)

Query: 17  REPSPKRYRRDGKQDRERDRDRDRERERGSERG----RDRDRVTTNGGGGA----GGDQN 68
           R+ S K Y +D   +   DR R  E + G E+G      +DR+  N    A    G + N
Sbjct: 674 RQDSNKPYGKDLSDEVSTDRSRIVETKGGKEKGDSQNDSKDRMKENDLKSAEKVKGVESN 733

Query: 69  PTDRDQRNLPPPPHSKQES--VGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQV 126
               D       PH K++S  V    + ++      +   +    RS ++ AE  + ++ 
Sbjct: 734 KKSTD-------PHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKR 786

Query: 127 GRSAGRREAGGKAFAQSKENSERVETS--QSREQRDEKSQAKLDDNLHRRDGSPERKDDP 184
            RS    E+   +  +S+     V  S  +SR +R   S  +  D+  R+  S  +   P
Sbjct: 787 RRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSP 846

Query: 185 -PSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERH 243
            P  +R+R           S  +  +  ++     ++ H   R++R   RS +P    RH
Sbjct: 847 SPGKSRRRHV---------SSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPH--RRH 895

Query: 244 EK 245
            K
Sbjct: 896 RK 897



 Score = 35.4 bits (80), Expect = 0.043
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 9/161 (5%)

Query: 12  HSKFDREPSPKRYRRDGKQDR------ERDRDRDRERERGSERGRDRDRVTTNGGGGAGG 65
           H K D     + +R + K+DR      E++ +R R R   +     R R  T+       
Sbjct: 740 HVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDS 799

Query: 66  DQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQ 125
            +    R +   P P  S+++       +S+D  +    S +  RS S  +   R     
Sbjct: 800 KRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRRR---HV 856

Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAK 166
             RS   + +  K    S  +  R + S+SR +   +   K
Sbjct: 857 SSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPHRRHRK 897


>At5g16780 putative protein
          Length = 820

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 6   SDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGG 65
           S  ++R  + D E SP R  RDG++  +  R +D+E++   E+ RD+D            
Sbjct: 8   SRHEIREERADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDH----------R 57

Query: 66  DQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQ 125
                +RD++        K+ S G   ++  D            + R+  +H +R N   
Sbjct: 58  RDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERN--RHKDRENERD 115

Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
             +   +  A  K  A  K + +  ET ++ E+ +      L++     D +   K+   
Sbjct: 116 NEKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDNRGLNEGGDNVDAASSGKEASA 175

Query: 186 SNTRKRPAFREKKIQGDSGDANPAVS 211
            + + R     ++ +  + DA+ A+S
Sbjct: 176 LDLQNRILKMREERKKKAEDASDALS 201



 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 55/233 (23%), Positives = 94/233 (39%), Gaps = 30/233 (12%)

Query: 4   RDSDSKLRHSKFDREP-SPKRYRRDGKQ--DRERDRDRDRERE----RGSERGRD--RDR 54
           +D  SK +   +DRE    K +RRD ++  DR+R RD D E+E    R  ER +D  RDR
Sbjct: 35  KDHRSKDKEKDYDREKIRDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDR 94

Query: 55  VTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSY 114
           V               + ++ N       +        KKS++  +    +A+       
Sbjct: 95  VKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETHKAAE------R 148

Query: 115 YQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRR 174
           Y+H++     + G +     +G +A A   +N       + RE+R +K++   D +    
Sbjct: 149 YEHSDNRGLNEGGDNVDAASSGKEASALDLQN----RILKMREERKKKAE---DASDALS 201

Query: 175 DGSPERKDDPPSNTRKRPAFREKKI--------QGDSGDANPAVSTERVKASH 219
             +  RK +   N  K+ A +  +I        QG++ D         VK  H
Sbjct: 202 WVARSRKIEEKRNAEKQRAQQLSRIFEEQDNLNQGENEDGEDGEHLSGVKVLH 254



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 38/154 (24%), Positives = 59/154 (37%), Gaps = 11/154 (7%)

Query: 132 RREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPER-------KDDP 184
           R +  G    + ++   + +  +S+++  +  + K+ D  HRRD   ER       +D  
Sbjct: 16  RADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDHRRDKEKERDRKRSRDEDTE 75

Query: 185 PSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHE 244
              +R R   REK     S D       E+ +  H D   ER+  KE+     R  ER  
Sbjct: 76  KEISRGRDKEREKD---KSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERAS 132

Query: 245 KQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNND 278
           K+   D         R   S   R    GG+N D
Sbjct: 133 KKSHEDDDETHKAAERYEHSDN-RGLNEGGDNVD 165


>At3g26560 ATP-dependent RNA helicase, putative
          Length = 1168

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 61/256 (23%), Positives = 94/256 (35%), Gaps = 34/256 (13%)

Query: 4   RDSDSKLRH--SKFDREPSPKRYRRDGKQDRER-----DRDRDRERERGSERGRDRDRVT 56
           +D+  K++    + +RE   +R   D  +DR+R     DRDRDR R+R   R R RDR  
Sbjct: 101 KDTKDKVKELEKEIEREAEERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDR-- 158

Query: 57  TNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY- 115
               G   G+   +DR  R        + E      +  +++ E  K  A  P     Y 
Sbjct: 159 ERNRGDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRRAKDEYVEEDKGGANEPELYQVYK 218

Query: 116 ----------------QHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQR 159
                           +   +     V + A RR    K F + ++    V+       +
Sbjct: 219 GRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVK-RDMEVYVKVISISSDK 277

Query: 160 DEKSQAKLDDNLHRRDGSPERK-DDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKAS 218
              S   +D N   RD  P RK  D   ++R  P++R K    D       +S  R+   
Sbjct: 278 YSLSMRDVDQNT-GRDLIPLRKPSDEDDSSRSNPSYRTK----DGQVTKTGISGIRI-VE 331

Query: 219 HTDHPPERNERKEERS 234
             D  P R   K+  S
Sbjct: 332 ENDVAPSRRPLKKMSS 347



 Score = 33.1 bits (74), Expect = 0.21
 Identities = 21/68 (30%), Positives = 28/68 (40%), Gaps = 7/68 (10%)

Query: 216 KASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGN 275
           + S  D   +RN  +++R    R  ER+       R     E RR     R R  G GG 
Sbjct: 134 RESGRDRDRDRNRDRDDRRDRHRDRERN-------RGDEEGEDRRSDRRHRERGRGDGGE 186

Query: 276 NNDRGRDK 283
             DR RD+
Sbjct: 187 GEDRRRDR 194


>At2g18540 putative vicilin storage protein (globulin-like)
          Length = 699

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 45/240 (18%), Positives = 88/240 (35%), Gaps = 23/240 (9%)

Query: 13  SKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDR 72
           +K   E   +R +R+ ++ R+R+ +R RE E    R  +R +                + 
Sbjct: 459 AKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKK-------------REEEA 505

Query: 73  DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGR 132
           +Q         K+E +     K  + +   K   +  R R   Q  +R   E   R   R
Sbjct: 506 EQARKREEEREKEEEMA----KKREEERQRKEREEVERKRREEQERKRREEEARKREEER 561

Query: 133 REAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRP 192
           +     A  + +E   +      R+ R+E+ + + ++   RR+   ++K+      +KR 
Sbjct: 562 KREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKRE 621

Query: 193 AFREK------KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQ 246
               K      KI+ +          ER +        E   ++EE +      ER +K+
Sbjct: 622 EEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKE 681



 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 38/213 (17%), Positives = 88/213 (40%), Gaps = 12/213 (5%)

Query: 110 RSRSYYQHAERGNTEQVG---RSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAK 166
           R R   +  ER   E+     R   +R    +A  + +E +ER +  +   ++ E+ + +
Sbjct: 427 RKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKR 486

Query: 167 LDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPER 226
            ++   RR+   +++++     RKR   REK+ +            ER +        + 
Sbjct: 487 EEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQE 546

Query: 227 NERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNA 286
            +R+EE +       + E+++A  R   R    R+    + R         +R R++  A
Sbjct: 547 RKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIR------EEQERKREEEMA 600

Query: 287 RQGYHPIKTRTEKWKHDLFQEADNDPVPKNEDD 319
           ++     + R +K + ++ ++   +   K E++
Sbjct: 601 KRRE---QERQKKEREEMERKKREEEARKREEE 630



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 92  DKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVE 151
           + K  + +E  +   +   +R   +  +R   E   R   R++   +A    K   ER +
Sbjct: 458 EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREK 517

Query: 152 TSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVS 211
             +  ++R+E+ Q K  + + R+    + +       RKR   R++              
Sbjct: 518 EEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKR-------------- 563

Query: 212 TERVKASHTDHPPERNERKE-ERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRAR 268
            E   A   +   +R ER+E ER        + E+++A  R   R +  R+    + R
Sbjct: 564 -EEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKR 620



 Score = 37.7 bits (86), Expect = 0.009
 Identities = 49/295 (16%), Positives = 114/295 (38%), Gaps = 37/295 (12%)

Query: 13  SKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDR 72
           SK  RE   +R RR+ ++   R ++ +  R+R   + R+ +            ++  T+R
Sbjct: 418 SKLMREIE-ERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRR-------EEEETER 469

Query: 73  DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGR 132
            +R                ++++   +E  K   +  + R      ER   E+    A +
Sbjct: 470 KKRE---------------EEEARKREEERKREEEEAKRRE----EERKKREEEAEQARK 510

Query: 133 REAGGKAFAQSKENSERVETSQ-------SREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
           RE   +   + +   +R E  Q        R++R+E+ + + ++   +R+   +R+++  
Sbjct: 511 REEEREK--EEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMA 568

Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKE-ERSGNPRHLERHE 244
               +    +E++              E   A   +   ++ ER+E ER        + E
Sbjct: 569 KRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKRE 628

Query: 245 KQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEK 299
           +++A  R   R    R+    + R   +     +R R++  A++     + + E+
Sbjct: 629 EEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEE 683



 Score = 37.0 bits (84), Expect = 0.015
 Identities = 31/184 (16%), Positives = 70/184 (37%), Gaps = 6/184 (3%)

Query: 8   SKLRHSKFDREPSPKRYRRDGKQDRERD-----RDRDRERERGSERGRDRDRVTTNGGGG 62
           ++ R  + ++E    + R + +Q +ER+     R  ++ER+R  E  R R+         
Sbjct: 508 ARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEM 567

Query: 63  AGGDQNPTDRDQRN-LPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERG 121
           A   +    R +R  +      +QE     +      QE  K   +    +   + A + 
Sbjct: 568 AKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKR 627

Query: 122 NTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERK 181
             E        R+   +   + K   E     +   +R+E++  + ++   +++   E++
Sbjct: 628 EEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEKR 687

Query: 182 DDPP 185
             PP
Sbjct: 688 RWPP 691



 Score = 32.7 bits (73), Expect = 0.28
 Identities = 27/123 (21%), Positives = 47/123 (37%), Gaps = 3/123 (2%)

Query: 138 KAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREK 197
           K   ++++ S   E +   E    K   ++++   R +   ER+       RKR     K
Sbjct: 395 KGLLKAQKESVIFECASCAEGELSKLMREIEERKRREEEEIERRRKEEEEARKRE--EAK 452

Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEER-SGNPRHLERHEKQIAGDRAPNRS 256
           + + +         TER K    +      ERK E      R  ER +++   ++A  R 
Sbjct: 453 RREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKRE 512

Query: 257 EGR 259
           E R
Sbjct: 513 EER 515


>At4g37820 unknown protein
          Length = 532

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 42/219 (19%), Positives = 87/219 (39%), Gaps = 15/219 (6%)

Query: 28  GKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQES 87
           G Q  + + D   + +   E  + ++         +  D++  ++ +R        K+ES
Sbjct: 289 GYQQTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEEKPERK------KKEES 342

Query: 88  VGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENS 147
              G+ K    +EP K   +   S+   +  E  N E+   S+       +   + KE S
Sbjct: 343 SSQGEGKE---EEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEES 399

Query: 148 ERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDAN 207
              E ++++E   + S+++  +N +      + +    SNT+K    +  + + +SG+  
Sbjct: 400 SSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDT 459

Query: 208 PAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQ 246
               TE       D     +E+KEE + N    E   +Q
Sbjct: 460 SNKETE------DDSSKTESEKKEENNRNGETEETQNEQ 492



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 39/216 (18%), Positives = 84/216 (38%), Gaps = 12/216 (5%)

Query: 14  KFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRD 73
           K        + +  GK +++    +D  +E   ER +  +    +   G G ++ P  R+
Sbjct: 302 KVQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEE----SSSQGEGKEEEPEKRE 357

Query: 74  QRNLPPPPHSKQESVGAGDKKSNDHQEP---PKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
           + +      SK+E     +K+++  QE     +   +     S  +  E   TE+    +
Sbjct: 358 KEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSES 417

Query: 131 GRRE-AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRR----DGSPERKDDPP 185
            R+E    +   +  E+++   T +  EQ+ ++S+ +  ++   +    D S    +   
Sbjct: 418 QRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKE 477

Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTD 221
            N R       +  Q  +  A     T+ VK + TD
Sbjct: 478 ENNRNGETEETQNEQEQTKSALEISHTQDVKDARTD 513



 Score = 37.0 bits (84), Expect = 0.015
 Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 17/235 (7%)

Query: 95  SNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQ 154
           S+ + E P+ +     +    + +    +   G+S G ++   +   + K  S   E+  
Sbjct: 253 SDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESKV 312

Query: 155 SREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTER 214
               ++EK  +   D         E K++ P   +K     E   QG+  +  P    + 
Sbjct: 313 KESGKNEKDASSSQD---------ESKEEKPERKKK----EESSSQGEGKEEEPEKREKE 359

Query: 215 VKASHTDHPPERNERKE-ERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSG 273
             +S  +   E  E KE E S +    E  E +I      +  EG  +   +  +   S 
Sbjct: 360 DSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEG-NENKETEKKSSESQ 418

Query: 274 GNNNDRGRDKFNARQGYHPIKTR--TEKWKHDLFQEADNDPVPKNEDDQIAKLEA 326
              N     K    +      T+   E+   +  +E+ ND   K  +D  +K E+
Sbjct: 419 RKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKTES 473


>At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA
           helicase
          Length = 733

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 32/101 (31%), Positives = 49/101 (47%), Gaps = 14/101 (13%)

Query: 6   SDSKLRHSKFDREPSPKRY-------RRDGKQDRERDRDRDRERERGSERGRDRDRVTTN 58
           S+ ++R  +  R P P+          RD  +DR+RDRDR+R+R+R  +RGRDRDR    
Sbjct: 46  SEQRVRREQLGR-PEPETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDRDR 104

Query: 59  GGGGAGGDQNPTDRDQRNLPPPP------HSKQESVGAGDK 93
                   +   +RD+R     P        ++E V A +K
Sbjct: 105 DRDRDRERERDRERDRRERDREPDRRNREKEREEEVKAREK 145



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 49/195 (25%), Positives = 86/195 (43%), Gaps = 23/195 (11%)

Query: 2   SHRDSDSKLRHSKFDREPSPKRYRRDGK-QDRERDRDRDRERERGSERGRD---RDRVTT 57
           ++RD D   R    DRE    R R  G+ +DR+RDRDRDR+RER  +R RD   RDR   
Sbjct: 70  TNRDKDRD-RDRDRDRERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREPD 128

Query: 58  NGGGGAGGDQNPTDRDQRNLPP-PPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQ 116
                   ++    R++  +       K++ + A  ++    ++P K   +P  S  +  
Sbjct: 129 RRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRP--SEKFRF 186

Query: 117 HAERGNTEQVGRS-----AGRREAG---GKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
             +  NTE   R          EA    G+ F    +  E       ++++  K + ++ 
Sbjct: 187 SFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRRE-------QKKQAAKHEKEMR 239

Query: 169 DNLHRRDGSPERKDD 183
           D + ++DG  E+ ++
Sbjct: 240 DEIRKKDGIVEKPEE 254



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 124 EQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD 183
           +Q+     RRE  G+   ++++ S           RD     + D +  R  G    +D 
Sbjct: 43  DQISEQRVRREQLGRPEPETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDR 102

Query: 184 PPSNTRKRPAFREKKIQGDSGDANP------AVSTERVKASHTDHPPERNERKEERSGNP 237
                R R   R+++      D  P          E VKA       +  ER++E     
Sbjct: 103 DRDRDRDRERERDRERDRRERDREPDRRNREKEREEEVKAREKARVEKLVEREKE----- 157

Query: 238 RHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRD 282
           + L+  ++Q  G + P +   R    S + R+     N  D  RD
Sbjct: 158 KELDAIKEQYLGGKKPKKRVIRP---SEKFRFSFDWENTEDTSRD 199



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 51/225 (22%), Positives = 79/225 (34%), Gaps = 69/225 (30%)

Query: 4   RDSDSKLRHSKFDREPSPKRYR---RDGKQDRERDRDRDRERERGS-------------- 46
           RD D   R    DRE    R R   RD  +DR+R+R+RDRER+R                
Sbjct: 80  RDRD---RERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREPDRRNREKER 136

Query: 47  ------------------ERGRDRDRVTTNGGGGAGGDQN------------------PT 70
                             E+ ++ D +     GG    +                    T
Sbjct: 137 EEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDT 196

Query: 71  DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
            RD   L   PH  Q   G G +   D +E  K +A+           E+   +++ +  
Sbjct: 197 SRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAK----------HEKEMRDEIRKKD 246

Query: 131 GRREAGGKAFAQSKENSERVETSQSREQRDEK--SQAKLDDNLHR 173
           G  E   +A AQ +   E  +T  S + R ++  S  +L++   R
Sbjct: 247 GIVEKPEEAAAQ-RVREEAADTYDSFDMRVDRHWSDKRLEEMTER 290


>At4g36690 splicing factor like protein
          Length = 573

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 58/210 (27%), Positives = 79/210 (37%), Gaps = 51/210 (24%)

Query: 18  EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNL 77
           +  PKR  RD   +RE  R +DRERE+G ++ R+RD   +         +   DRD    
Sbjct: 34  DSKPKRESRD--HERETSRSKDREREKGRDKDRERDSEVS---------RRSRDRDGEK- 81

Query: 78  PPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHA-ERGNTEQVGRSAGRREAG 136
                SK+ S      K  DH+E  +H     RS  +  H+ ERG          RRE G
Sbjct: 82  -----SKERS----RDKDRDHRE--RHH----RSSRHRDHSRERGE---------RRERG 117

Query: 137 GKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRD--GSPERKDDPPSNTRKRPAF 194
           G+            +    R  RD     + DD   RR        KD     TR R   
Sbjct: 118 GR------------DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165

Query: 195 REKKIQGDSGDANPAVSTERVKASHTDHPP 224
           + K+       A PA +     A+ T   P
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195



 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 4   RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGA 63
           RDS+   R    D E S +R R   +  RER     R R+   ERG  R+R      GG 
Sbjct: 66  RDSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRER------GGR 119

Query: 64  GGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNT 123
             D     RD+       H ++     G +           S +  RSRS  +  +R + 
Sbjct: 120 DDDDYRRSRDR------DHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSG 173

Query: 124 EQVGRSAGRREAGGKA 139
             +   A    A G A
Sbjct: 174 FDMAPPASAMLAAGAA 189



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 41/166 (24%), Positives = 70/166 (41%), Gaps = 37/166 (22%)

Query: 5   DSDSKLRHSKFDREPSPKRYRRDGK---QDRERD-----RDRDRERERGSERGRDRDRVT 56
           DS  K      +RE S  + R   K   +DRERD     R RDR+ E+  ER RD+DR  
Sbjct: 34  DSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDR-- 91

Query: 57  TNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQ 116
                      +  +R  R+     HS++     G+++    ++             Y +
Sbjct: 92  -----------DHRERHHRSSRHRDHSRER----GERRERGGRD----------DDDYRR 126

Query: 117 HAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEK 162
             +R +  +     GRR    ++ ++SK+ SER   S+S  +  ++
Sbjct: 127 SRDRDHDRRRDDRGGRRSR--RSRSRSKDRSERRTRSRSPSKSKQR 170



 Score = 36.2 bits (82), Expect = 0.025
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 145 ENSERVETSQSREQRD---EKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQG 201
           E  +++++   RE RD   E S++K  +    RD   ER  +    +R R   + K+   
Sbjct: 28  EIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSR 87

Query: 202 DSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRR 260
           D  D +      R  + H DH  ER ER+ ER G      R  +    DR  +   GRR
Sbjct: 88  DK-DRDHRERHHR-SSRHRDHSRERGERR-ERGGRDDDDYRRSRDRDHDRRRDDRGGRR 143


>At3g47270 putative protein
          Length = 671

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 31/224 (13%)

Query: 21  PKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPP 80
           P  Y R+  + +E D  +++E E+  E G++ +       G           D+R     
Sbjct: 287 PASYTRE--EQKEEDEKKEQEEEKQEEEGKEEELEKVEYRG-----------DERT---- 329

Query: 81  PHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAF 140
              KQE    GD++    +E  K   +           + G  +Q     G  E  G+  
Sbjct: 330 --EKQEIPKQGDEEMEGEEEKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEE 387

Query: 141 AQSKENSERVE----------TSQSREQRDEKSQAKLDDNLHRRDGSPE--RKDDPPSNT 188
            Q +E  E  E          T    E   +++  + D+ + R +G  E   + D    T
Sbjct: 388 KQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREEGKEENVEEHDEHDET 447

Query: 189 RKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEE 232
             + A+       D+G A     ++  K   T+ P E N  + +
Sbjct: 448 EDQKAYVILSDDEDNGTAPTEKESQPQKEETTEVPKEENVEEHD 491



 Score = 33.9 bits (76), Expect = 0.13
 Identities = 38/191 (19%), Positives = 70/191 (35%), Gaps = 33/191 (17%)

Query: 104 HSAQPPRSRSYYQHAER--GNTEQVGRSAGRREA--GGKAFAQSKENSERVETSQSREQR 159
           H ++  +S S+ +  +    N E + +  GR E   G +    S    E+ E  + +EQ 
Sbjct: 246 HQSRKRKSMSFGEKVKLVYENCEVLKKKVGRLEGYLGIQRVPASYTREEQKEEDEKKEQE 305

Query: 160 DEKSQAK-----LDDNLHRRDGSPERKDDPPSNTRKRPAFREKK-------------IQG 201
           +EK + +     L+   +R D   E+++ P     +     EK+              +G
Sbjct: 306 EEKQEEEGKEEELEKVEYRGDERTEKQEIPKQGDEEMEGEEEKQKEEGKEEEEEKVEYRG 365

Query: 202 DSGDANPAVSTERVKASHTDHPPERNERKEER-----------SGNPRHLERHEKQIAGD 250
           D G     +  +  +    +   +  E KEE            + N    E+ E    GD
Sbjct: 366 DEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGD 425

Query: 251 RAPNRSEGRRD 261
               R EG+ +
Sbjct: 426 EEMEREEGKEE 436



 Score = 28.1 bits (61), Expect = 6.9
 Identities = 28/157 (17%), Positives = 54/157 (33%), Gaps = 29/157 (18%)

Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHE------------- 244
           +++G  G      S  R +    D   E+ E K+E  G    LE+ E             
Sbjct: 276 RLEGYLGIQRVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYRGDERTEKQEIP 335

Query: 245 ----KQIAGDRAPNRSEGRRDGFSSRARYGGSG---------GNNNDRGRDKFNARQGYH 291
               +++ G+    + EG+ +        G  G         G+    G ++    +G  
Sbjct: 336 KQGDEEMEGEEEKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKE 395

Query: 292 PIKTRTEKWKHDL---FQEADNDPVPKNEDDQIAKLE 325
             + + E   H      +E +    PK  D+++ + E
Sbjct: 396 EEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREE 432


>At2g29210 proline-rich protein like
          Length = 878

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 62/282 (21%), Positives = 105/282 (36%), Gaps = 36/282 (12%)

Query: 3   HRDSDSKLRHSKFDREPSP--KRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGG 60
           H+ + S +R     R P+P  +R RR     R  DR R R         R R     +  
Sbjct: 574 HQKARSPVRR----RSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSPPVLHRS 629

Query: 61  GGAGGDQNPTDR--------DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSR 112
               G ++  +R        +Q  +      K+ SV   DK+    ++ P+   +  R  
Sbjct: 630 PSPRGRKHQRERRSPGRLSEEQDRVQNSKLLKRTSVPDTDKR----KQLPEKLLEVGRVE 685

Query: 113 SYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSR--EQRDEKSQAKLDDN 170
            Y +   + +     RS  R      +  ++ E   R  +S+ +  EQ +++  + LD N
Sbjct: 686 HYKEQERKSDKLSEKRSVHRHHGSQMSPVENSEGRSRPVSSKVKDSEQVEKEDNSDLDAN 745

Query: 171 LHRRDGSPERKDDPPSNTRK-RPAFREKKIQGDSGDANPAVSTERV------------KA 217
           L        R      N RK + + RE+    D+G ++  V   +             K 
Sbjct: 746 LSCDSKDTIRHQIKDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKE 805

Query: 218 SHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGR 259
                  ER+ ++EER G     E+H+KQ   D +    E R
Sbjct: 806 EKKRRREERHRKREERRGGK---EKHKKQELSDTSEGEVEAR 844



 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 66/293 (22%), Positives = 104/293 (34%), Gaps = 33/293 (11%)

Query: 1   MSHRDSDSK-LRHSKFDREPSPKRYRR----DGKQDRERDRDRDRERERGSERGRDRDRV 55
           M  R+ D K + H    +  S   ++     D K  R+R  D  R  E+   + R RD +
Sbjct: 141 MKKREGDKKNIEHDILRKIDSGVEHKETNGMDAKPSRDRPEDGRRADEKNGVKERRRDLI 200

Query: 56  TTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY 115
               G  +   ++P    +       +S  +S  +G++KS    +    S   PR R   
Sbjct: 201 PPRRGDAS---RSPLRGSRSRSISKTNSGSKSY-SGERKSRSTSQSSDASIS-PRKRRLS 255

Query: 116 QHAERGNTEQVGRSAGRREAGGKAFAQSKENS----ERVETSQSREQRDEKSQAKLDDNL 171
               R  +  V RS   R     +  +S+  S     R  T + R Q    S+       
Sbjct: 256 NSRRRSRSRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSR------- 308

Query: 172 HRRDGSP----ERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERN 227
            RR  SP     R   PP+  R+ P+   ++ +  +  A    S       H   PP R 
Sbjct: 309 RRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPPPARR 368

Query: 228 ER------KEERSGNPRHLERHEKQ--IAGDRAPNRSEGRRDGFSSRARYGGS 272
            R      +  RS +P    R         +R+P+    R    S  A+ G S
Sbjct: 369 RRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSPLYRRNRSRSPLAKRGRS 421


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.307    0.128    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,118,822
Number of Sequences: 26719
Number of extensions: 476028
Number of successful extensions: 4228
Number of sequences better than 10.0: 377
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 2400
Number of HSP's gapped (non-prelim): 1025
length of query: 330
length of database: 11,318,596
effective HSP length: 100
effective length of query: 230
effective length of database: 8,646,696
effective search space: 1988740080
effective search space used: 1988740080
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)


Lotus: description of TM0218.18