BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0218.18
(330 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19650 unknown protein 147 8e-36
At1g20920 putative RNA helicase 60 1e-09
At3g28770 hypothetical protein 57 2e-08
At5g53440 putative protein 56 2e-08
At5g57370 unknown protein 55 7e-08
At3g50670 U1 snRNP 70K protein 55 7e-08
At1g60900 putative U2 snRNP auxiliary factor 55 7e-08
At4g09980 unknown protein 54 1e-07
At3g23900 unknown protein 52 3e-07
At2g16940 splicing factor like protein 51 8e-07
At3g49600 putative protein 51 1e-06
At1g70620 unknown protein 51 1e-06
At5g16780 putative protein 50 1e-06
At3g26560 ATP-dependent RNA helicase, putative 49 3e-06
At2g18540 putative vicilin storage protein (globulin-like) 49 3e-06
At4g37820 unknown protein 49 5e-06
At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA he... 47 1e-05
At4g36690 splicing factor like protein 47 2e-05
At3g47270 putative protein 46 2e-05
At2g29210 proline-rich protein like 46 2e-05
>At3g19650 unknown protein
Length = 302
Score = 147 bits (371), Expect = 8e-36
Identities = 124/336 (36%), Positives = 164/336 (47%), Gaps = 50/336 (14%)
Query: 4 RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRD-RDRVTTNGGGG 62
RDSD + S+ DREPSPKR RRDGK + ER S++ D RD T
Sbjct: 8 RDSDPRRHRSRIDREPSPKRSRRDGKPEAERVL---------SKKDLDVRDGTDTEKNSR 58
Query: 63 AGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPK---HSAQPPRSRSYYQHAE 119
P + D S+++S +KK + H E K H +Q PRSR Y QH +
Sbjct: 59 QSLRDAPLELDAHG------SRKDS----EKKHSGHHETTKAAPHLSQVPRSRPYSQHDD 108
Query: 120 RGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLH--RRDGS 177
R + +V R R + ++ S++ S R R DEKSQ + D++ R D
Sbjct: 109 RRSDGKVDR---RPTSVRGSWRSSRDQSNR------RAGDDEKSQHRKDEDKSSWRHDRF 159
Query: 178 PERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNP 237
E D + +RKRPAFREKKI ++G+ TE K ++ + N R+ ER+
Sbjct: 160 RESDDTQGALSRKRPAFREKKIAEETGNNTDRTRTEDGKDTNLN-----NRRQNERNWRS 214
Query: 238 R-HLERHEKQIAG-DRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKT 295
H ERHE+ G DR NR + R G SR Y DR R N R G+ T
Sbjct: 215 NTHSERHERPAMGRDRVWNRDDER--GAGSRQSYQA------DRDRFNGNGRSGFSGSWT 266
Query: 296 RTEK-WKHDLFQEADNDPVPKNEDDQIAKLEALLAS 330
R EK W HDLF EA+ P E++QIAK+EALLAS
Sbjct: 267 RNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLAS 302
>At1g20920 putative RNA helicase
Length = 1166
Score = 60.5 bits (145), Expect = 1e-09
Identities = 75/342 (21%), Positives = 132/342 (37%), Gaps = 52/342 (15%)
Query: 4 RDSDSKLRHSKFDREPSPKR------YRRDGKQDRERDRDRDRERERGSERGRDRDRVTT 57
+D S+ R K R+ K Y RD ++RE+ ++++RER R RD+DRV
Sbjct: 37 KDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR-----RDKDRVKR 91
Query: 58 NGGGGAGGD--QNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY 115
D + + D+R+ + V ++ +H+ + R R
Sbjct: 92 RSERRKSSDSEDDVEEEDERD--------KRRVNEKERGHREHERDRGKDRKRDREREER 143
Query: 116 QHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEK--SQAKLDDNLHR 173
+ ER + R RE K + +E ER + + R +R+++ S+ + R
Sbjct: 144 KDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSR 203
Query: 174 RDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPP----ERNER 229
G+ E DD KR R +K G+ + S R + H D P E N
Sbjct: 204 EVGNEESDDDV-----KRDLKRRRKEGGERKEKEREKSVGR-SSRHEDSPKRKSVEDNGE 257
Query: 230 KEERSGNPRHLERHEKQIAGDRAPNRSE-------GRRDGFSSRARYGGSGGNNNDRGR- 281
K+E+ LE +K++ + R R+ + G + GN G+
Sbjct: 258 KKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKA 317
Query: 282 ----DKFNARQGYHPIKTRTEKWKHDLFQEADNDPVPKNEDD 319
+ + +G+ K+ TE + D + P+N+ D
Sbjct: 318 WTLEGESDDEEGHPEEKSETE-------MDVDEETKPENDGD 352
Score = 56.2 bits (134), Expect = 2e-08
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 21/229 (9%)
Query: 29 KQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESV 88
K R+RDR +R++++GSE+ R++DR D D D+ ++
Sbjct: 24 KSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR 83
Query: 89 GAGD--------KKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAF 140
D +KS+D ++ + + R + ERG+ E R G+ +
Sbjct: 84 RDKDRVKRRSERRKSSDSEDDVEE--EDERDKRRVNEKERGHREH-ERDRGKDRKRDRER 140
Query: 141 AQSKENSERVETSQSREQRD----EKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFRE 196
+ K+ E + R +R+ EK + K + R DG +R++ +R RE
Sbjct: 141 EERKDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERE 200
Query: 197 KKIQGDSGDANPAVSTERVKASHTDHPPERNERKE-ERSGNPRHLERHE 244
+ S + S + VK E ERKE ER + RHE
Sbjct: 201 R-----SREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHE 244
Score = 38.9 bits (89), Expect = 0.004
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 150 VETSQSREQRDE--KSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDAN 207
VE S+ R + + + +A L + RD S ERK D S R+ R+K+++ S D+
Sbjct: 3 VEKSKYRSEDLDVVEEEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVK--SSDSE 60
Query: 208 PAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRA 267
+ + ER R+ ++ R ER + + D E RD
Sbjct: 61 DDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDV--EEEDERDKRRVNE 118
Query: 268 RYGGSGGNNNDRGRDKFNARQ 288
+ G + DRG+D+ R+
Sbjct: 119 KERGHREHERDRGKDRKRDRE 139
Score = 32.3 bits (72), Expect = 0.37
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 6/126 (4%)
Query: 134 EAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPA 193
EA K + ++ S + + E+R EK + K + +R DD RK
Sbjct: 19 EADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKE 78
Query: 194 FREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAP 253
++ D +ER K+S ++ E + +++R N + ER ++ DR
Sbjct: 79 RERRRRDKDRVKRR----SERRKSSDSEDDVEEEDERDKRRVNEK--ERGHREHERDRGK 132
Query: 254 NRSEGR 259
+R R
Sbjct: 133 DRKRDR 138
>At3g28770 hypothetical protein
Length = 2081
Score = 56.6 bits (135), Expect = 2e-08
Identities = 68/325 (20%), Positives = 137/325 (41%), Gaps = 32/325 (9%)
Query: 7 DSKLRHSKFDREPSPKRYRRDGKQDRERDRD-RDRERERGSERGRDRDRVTTNGGGGAGG 65
D+K S +R+ + +R D K+D+E +D + E + +E G V TN G
Sbjct: 803 DNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGG----VDTN----VGN 854
Query: 66 DQNPTD-RDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPR--SRSYYQHAERGN 122
++ D +D R++ + K+ES+ KK + Q K S + R + + ++G+
Sbjct: 855 KEDSKDLKDDRSVEVKAN-KEESM---KKKREEVQRNDKSSTKEVRDFANNMDIDVQKGS 910
Query: 123 TEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKD 182
E V ++ G K +EN + + TS ++ +D+K + K N + + ++K+
Sbjct: 911 GESVKYKKDEKKEGNK-----EENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKE 965
Query: 183 DPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERK--EERSGNPRHL 240
+ +K+ +++ + ++ + K D + E+K EE+ +
Sbjct: 966 YVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEE 1025
Query: 241 ERHEKQIAGD--RAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTE 298
+ EK+ + D R SE R+ + ++K + H K + +
Sbjct: 1026 AKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESEN--HKSKKKED 1083
Query: 299 KWKHDLFQEADNDPVPKNEDDQIAK 323
K +H+ DN + K ED + K
Sbjct: 1084 KKEHE-----DNKSMKKEEDKKEKK 1103
Score = 51.2 bits (121), Expect = 8e-07
Identities = 62/327 (18%), Positives = 127/327 (37%), Gaps = 38/327 (11%)
Query: 11 RHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPT 70
+ S D++ K + D K D+ D ++ + G E +D V G + T
Sbjct: 703 KDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGE-SKDDKSVEAKGKKKESKENKKT 761
Query: 71 DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
++ + +K+E+V K+S ++ K ++ +S E + +++ +
Sbjct: 762 KTNENRV----RNKEENVQGNKKESEKVEKGEKKESKDAKS------VETKDNKKLSSTE 811
Query: 131 GRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTR- 189
R EA ++ +KE+ E + QS E +++ +D N+ ++ S + KDD +
Sbjct: 812 NRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKA 871
Query: 190 -KRPAFREKKIQGDSGDANPAVSTERV------------KASHTDHPPERNERKE-ERSG 235
K + ++K+ + D + ST+ V K S +++E+KE +
Sbjct: 872 NKEESMKKKREEVQRNDKS---STKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEE 928
Query: 236 NPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKT 295
N + KQ D+ + E + + D+ N + K
Sbjct: 929 NKDTINTSSKQKGKDKKKKKKESKNSNMKKK---------EEDKKEYVNNELKKQEDNKK 979
Query: 296 RTEKWKHDLFQEADNDPVPKNEDDQIA 322
T K ++ +E + D K E + A
Sbjct: 980 ETTKSENSKLKEENKDNKEKKESEDSA 1006
Score = 45.8 bits (107), Expect = 3e-05
Identities = 45/254 (17%), Positives = 105/254 (40%), Gaps = 20/254 (7%)
Query: 22 KRYRRDGKQDRERDRDRDRERERGSE--RGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPP 79
K+ +++ K + ++ D++ +E + D + TT ++N +++++
Sbjct: 945 KKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESED 1004
Query: 80 PPHSKQESVGAGDKKSNDHQEPPKHSAQPP-RSRSYYQHAERGNTEQVGRS----AGRRE 134
+E +KKS +E K + + R ER + ++ S A ++E
Sbjct: 1005 SASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKE 1064
Query: 135 AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAF 194
K +S EN + + +E D KS K +D E+K S +RK+
Sbjct: 1065 EETKEKKES-ENHKSKKKEDKKEHEDNKSMKKEED-------KKEKKKHEESKSRKKEED 1116
Query: 195 RE--KKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRA 252
++ +K++ + + E+ K+ H + +++KE++ + K+I ++
Sbjct: 1117 KKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEK---SETKEIESSKS 1173
Query: 253 PNRSEGRRDGFSSR 266
+++ SS+
Sbjct: 1174 QKNEVDKKEKKSSK 1187
Score = 38.1 bits (87), Expect = 0.007
Identities = 53/345 (15%), Positives = 128/345 (36%), Gaps = 38/345 (11%)
Query: 4 RDSDSKLRHSKFD----REPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRD-RVTTN 58
+D K + SK +E K Y + + +E ++ + E + ++D +
Sbjct: 942 KDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKE 1001
Query: 59 GGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQ-EPPKHSAQPPRSRSYYQH 117
A ++ + +++ +K+E + DKK + E K + SR
Sbjct: 1002 SEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK 1061
Query: 118 AERGNTEQVGRSAGRREAGGKAFAQSKENS------ERVETSQSREQR------DEKSQA 165
+ T++ S + + + ++N ++ E + E + D+K
Sbjct: 1062 KKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDME 1121
Query: 166 KLDD---NLHRRDGSPERKDDPPSNTRKRPAFREKK----------IQGDSGDANPAVST 212
KL+D N + D + ++K +K +EKK I+ N
Sbjct: 1122 KLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKK 1181
Query: 213 ERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRR-------DGFSS 265
E+ + E+ ++ E ++ E +KQ + + + E ++ D ++
Sbjct: 1182 EKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNT 1241
Query: 266 RARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHDLFQEADN 310
+ GG + ++ N ++ + +++ K+++ +AD+
Sbjct: 1242 TKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADS 1286
Score = 33.5 bits (75), Expect = 0.16
Identities = 42/240 (17%), Positives = 85/240 (34%), Gaps = 36/240 (15%)
Query: 29 KQDRERDRDRDRE--RERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQE 86
K+ RE + + E + E D+ + + GA + + ++R H
Sbjct: 583 KEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGHDNSI 642
Query: 87 SVGAGDKK---SNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQS 143
+ D K ++ ++E H + + + +V ++ G E G + +
Sbjct: 643 NSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENN 702
Query: 144 KENSERVETSQSREQRDEKSQAKLDD----------------NLHRRDGSPERKDDPPSN 187
K++ E + Q D K +DD ++ + E K++ +
Sbjct: 703 KDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTK 762
Query: 188 TRK-RPAFREKKIQG--------------DSGDANPAVSTERVKASHTDHPPERNERKEE 232
T + R +E+ +QG +S DA + + K S T++ E ER E
Sbjct: 763 TNENRVRNKEENVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGE 822
>At5g53440 putative protein
Length = 1181
Score = 56.2 bits (134), Expect = 2e-08
Identities = 46/202 (22%), Positives = 81/202 (39%), Gaps = 32/202 (15%)
Query: 11 RHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPT 70
R+ +DRE R+ +DR+RD +RDR+R+R +R RDRDR
Sbjct: 305 RNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDR---------------- 348
Query: 71 DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
RD + H + + DH+ H + RSR YY +R ++
Sbjct: 349 -RDYEH--DRYHDRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSD------ 399
Query: 131 GRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSN-TR 189
R + ++ + S R +++RD + D GS + +P + TR
Sbjct: 400 -RERDNDRDVSRLDDQSGRY-----KDRRDGRRSPDYQDYQDVITGSRSSRVEPDGDMTR 453
Query: 190 KRPAFREKKIQGDSGDANPAVS 211
+Q ++G+A+ ++
Sbjct: 454 PERQLSSSVVQEENGNASDQIT 475
Score = 54.7 bits (130), Expect = 7e-08
Identities = 84/357 (23%), Positives = 131/357 (36%), Gaps = 49/357 (13%)
Query: 3 HRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDR----VTTN 58
+ S SK R K S R +GK D + + + + + SE+ R RD T
Sbjct: 68 YTSSSSKRRKGKSGESGSD---RWNGKDDDKGESSK--KTKVSSEKSRKRDEGDGEETKK 122
Query: 59 GGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDK--KSNDHQEPPKHSAQPPRSRSYYQ 116
G + G + R + ++ G DK +DH K A ++ S Q
Sbjct: 123 SSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHH---KSKAGSDKTESKAQ 179
Query: 117 -HAERGNTEQVGRSAGRRE-----AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDN 170
HA TE RR+ G K S + +RV TS +D K + + +
Sbjct: 180 DHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRD 239
Query: 171 LHRRDGSPE--------RKDDPPSN-------------TRKRPAFREKKIQGDSGDANPA 209
+R D E ++DD P+ ++K+ F++ G D+
Sbjct: 240 KYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDND-HGHEPDSELD 298
Query: 210 VSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARY 269
ER + D +RNER ER+ + ++ DR R RRD + +
Sbjct: 299 GYHERERNRDYDRESDRNERDRERTRDRDRDYERDRDRDRDRDRERDRDRRD-YEHDRYH 357
Query: 270 GGSGGNNNDRGRDKFNARQGYHP-IKTRTEKWKHD-----LFQEADNDPVPKNEDDQ 320
+ R RD+ + R H K R+ + HD +E DND DDQ
Sbjct: 358 DRDWDRDRSRDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQ 414
Score = 43.9 bits (102), Expect = 1e-04
Identities = 43/218 (19%), Positives = 80/218 (35%), Gaps = 8/218 (3%)
Query: 89 GAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSE 148
G+GDK+ + + S S + + R G+ + G++ ++K +SE
Sbjct: 48 GSGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSE 107
Query: 149 RVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANP 208
+ + + K + D HR E KD RK + K
Sbjct: 108 KSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKS 167
Query: 209 AVSTERVKASHTDH--PPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDG-FSS 265
+++ ++ DH P E+RS R + GD+ + S+ D +S
Sbjct: 168 KAGSDKTESKAQDHARSPGTENYTEKRSRRKR-----DDHGTGDKHHDNSDDVGDRVLTS 222
Query: 266 RARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHD 303
Y G + ++ RDK+ + IK + +K + D
Sbjct: 223 GDDYIKDGKHKGEKSRDKYREDKEEEDIKQKGDKQRDD 260
>At5g57370 unknown protein
Length = 219
Score = 54.7 bits (130), Expect = 7e-08
Identities = 51/187 (27%), Positives = 77/187 (40%), Gaps = 42/187 (22%)
Query: 1 MSHRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGG 60
MS RD + R D++ P R RR G+ DR+RDRDRDRER+R ER RDR
Sbjct: 1 MSERDRRERER----DKDREPDRDRRRGRDDRDRDRDRDRERDR--ERDRDR-------- 46
Query: 61 GGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAER 120
G +N R ++ DH +H P R RS + +R
Sbjct: 47 ----GLRNKKSR--------------------SRTPDHHARARHVRSPERYRSRSRSIDR 82
Query: 121 GNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPER 180
R RR A ++ + V+ + R ++ + + +D+N ++
Sbjct: 83 DRDRDRQRHHRRRSPSPDAPSRKRPRQGSVDDEKERNRKRVVTDS-VDEN---ASTITKK 138
Query: 181 KDDPPSN 187
KD PS+
Sbjct: 139 KDKQPSD 145
>At3g50670 U1 snRNP 70K protein
Length = 427
Score = 54.7 bits (130), Expect = 7e-08
Identities = 42/143 (29%), Positives = 66/143 (45%), Gaps = 15/143 (10%)
Query: 17 REPSPKRYRRDGKQDRERD--RDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQ 74
RE R R G +DR+RD RDRDR R+RG RDRDR G + DR +
Sbjct: 295 REDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDR-----GRDRTSRDHDRDRSR 349
Query: 75 RNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRRE 134
+ + E G G + D ++ +P +R YY+ ++G+T++ + E
Sbjct: 350 KKERDYEGGEYEHEGGGRSRERD----AEYRGEPEETRGYYED-DQGDTDRYSHRYDKME 404
Query: 135 AGGKAFAQSKENSERVETSQSRE 157
+ + + S+R S+SRE
Sbjct: 405 EDDFRYEREYKRSKR---SESRE 424
Score = 40.8 bits (94), Expect = 0.001
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 18/221 (8%)
Query: 27 DGKQ---DRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPP--PP 81
DG++ D ER R R R G RV GG G+Q P R ++ P P
Sbjct: 205 DGRRVLVDVERGRTVPNWRPRRLGGGLGTSRV--GGGEEIVGEQQPQGRTSQSEEPSRPR 262
Query: 82 HSKQESVGAGDKKSND----HQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGG 137
+++S G ++ H++P + S PR +++ ++G ++ S R+
Sbjct: 263 EEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTR 322
Query: 138 KAFAQSKENSERVETSQSREQRDEKSQAKLDD----NLHRRDGSPERKDDPPSNTRKRPA 193
+ + + +R SR+ ++S+ K D G R+ D + R P
Sbjct: 323 DRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGGRSRERD--AEYRGEPE 380
Query: 194 FREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERS 234
+ D GD + S K D ER ++ +RS
Sbjct: 381 ETRGYYEDDQGDTD-RYSHRYDKMEEDDFRYEREYKRSKRS 420
Score = 32.3 bits (72), Expect = 0.37
Identities = 35/167 (20%), Positives = 63/167 (36%), Gaps = 11/167 (6%)
Query: 18 EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDR----DRVTTNGGGGAGGDQNPTDRD 73
E P+ ++ +R++ RE+G ER R R ++ D++ DRD
Sbjct: 245 EQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRD 304
Query: 74 QRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQH-AERGNTEQVGRSAGR 132
Q S+++ D+ D ++ + R R+ H +R ++ G
Sbjct: 305 QGGRDRDRDSRRDRDRTRDRGDRDRRDRDR-----GRDRTSRDHDRDRSRKKERDYEGGE 359
Query: 133 REAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPE 179
E G ++ ++ R E ++R E Q D HR D E
Sbjct: 360 YEHEGGGRSRERDAEYRGEPEETRGYY-EDDQGDTDRYSHRYDKMEE 405
>At1g60900 putative U2 snRNP auxiliary factor
Length = 589
Score = 54.7 bits (130), Expect = 7e-08
Identities = 45/174 (25%), Positives = 77/174 (43%), Gaps = 20/174 (11%)
Query: 3 HRDSDSKLRH------SKFDREPSPKRYRRDGKQDRERDRDRDRE--RERGSERGRDRDR 54
H DS S+ H SK + + +DG +DR+R++DRDRE R+R E+ RDRDR
Sbjct: 31 HEDSKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDR 90
Query: 55 VTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSY 114
D+ + QR+ + S +K+ + + + S R RS
Sbjct: 91 -----------DRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSR 139
Query: 115 YQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
+ E + + RS R + ++ ++ + SE S+SR + K ++ D
Sbjct: 140 DRDREVRHRRR-SRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGFD 192
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 23/186 (12%)
Query: 18 EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNL 77
E SP ++ + +D + E+ +E GRD+D DRD+
Sbjct: 26 ESSPFHEDSKSRESHDLKKDSSKISEKDNENGRDKD--------------GNKDRDREK- 70
Query: 78 PPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGG 137
+++S +KS D + S R R H +R RS R +
Sbjct: 71 ---DRDREKSRDRDREKSRDRDRDRERSKDRQRDR---HHRDRHRDRSRERSEKRDDLDD 124
Query: 138 KAFAQSKENSERVETSQSREQRD-EKSQAKLDDNLHRRDGSPER-KDDPPSNTRKRPAFR 195
+S++ R + RE R +S+++ RR S R K + S +R R +
Sbjct: 125 DHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSK 184
Query: 196 EKKIQG 201
K+ G
Sbjct: 185 SKRRSG 190
Score = 38.1 bits (87), Expect = 0.007
Identities = 42/144 (29%), Positives = 59/144 (40%), Gaps = 27/144 (18%)
Query: 143 SKENSERVETSQSREQRD-EKSQAKLD--DNLHRRDGSPERKDDPPSNTRKRPAFREKKI 199
S E+S E S+SRE D +K +K+ DN + RD KD R++ REK
Sbjct: 24 SLESSPFHEDSKSRESHDLKKDSSKISEKDNENGRD-----KDGNKDRDREKDRDREK-- 76
Query: 200 QGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGR 259
S +R + D +R ER ++R + H +RH DR+ RSE R
Sbjct: 77 -----------SRDRDREKSRDRDRDR-ERSKDRQRDRHHRDRHR-----DRSRERSEKR 119
Query: 260 RDGFSSRARYGGSGGNNNDRGRDK 283
D R R RD+
Sbjct: 120 DDLDDDHHRRSRDRDRRRSRDRDR 143
Score = 32.3 bits (72), Expect = 0.37
Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 14/161 (8%)
Query: 141 AQSKENSERVETSQSREQRDEKSQAKLDDNLHR-----RDGSPER-KDDPPSNTRKRPAF 194
++S+E+ + + S ++D ++ D N R RD R +D S R R
Sbjct: 34 SKSRESHDLKKDSSKISEKDNENGRDKDGNKDRDREKDRDREKSRDRDREKSRDRDRDRE 93
Query: 195 REKKIQGD--SGDANPAVSTERVKAS---HTDHPPERNERKEERSGNPRHLERHEKQIAG 249
R K Q D D + S ER + DH +R RS + RH ++
Sbjct: 94 RSKDRQRDRHHRDRHRDRSRERSEKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRR--- 150
Query: 250 DRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGY 290
R+ +RS R S + R R K R G+
Sbjct: 151 SRSRSRSRSERRSRSEHRHKSEHRSRSRSRSRSKSKRRSGF 191
>At4g09980 unknown protein
Length = 963
Score = 53.9 bits (128), Expect = 1e-07
Identities = 65/293 (22%), Positives = 104/293 (35%), Gaps = 27/293 (9%)
Query: 2 SHRDSDSKLRHSKFDREPSPKR----------YRRDGKQDRERDRDRDRERERGS---ER 48
S RD SK R K D SP + R G+ +R + D D E+E+ S ER
Sbjct: 142 SSRDEKSKSRGVKDDDRGSPLKKTSGKDGSEVVREVGRSNRSKTPDADYEKEKYSRKDER 201
Query: 49 GRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQP 108
R RD + DRDQ L + S G D+K D +
Sbjct: 202 SRGRD-----------DGWSDRDRDQEGLKDNWKRRHSSSGDKDQKDGDLLYDRGREREF 250
Query: 109 PRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
PR ER + GR G R KA + ++E + + + + + + +
Sbjct: 251 PRQGRERSEGERSHGRLGGRKDGNRGEAVKALSSGGVSNENYDVIEIQTKPHDYVRGESG 310
Query: 169 DNLHRRDGSPERKDDPPSNTRKRPAF-REKKIQGDSGDANPAVSTERVKASHTDHPPERN 227
N R S ++ PSN + A +E + + ++ R +A
Sbjct: 311 PNFARMTESGQQPPKKPSNNEEEWAHNQEGRQRSETFGFGSYGEDSRDEAGEASSDYSGA 370
Query: 228 ERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRG 280
+ + +R P + G + P + G R + R +GG N +G
Sbjct: 371 KARNQRGSTPGRTNFVQTPNRGYQTPQGTRGNRPLRGGKGR--PAGGRENQQG 421
Score = 40.8 bits (94), Expect = 0.001
Identities = 62/285 (21%), Positives = 118/285 (40%), Gaps = 48/285 (16%)
Query: 30 QDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVG 89
QD E+D E+ R S + D + + +GG + + D +++ H ++S
Sbjct: 18 QDGEQDGGDRSEKRRMSLKASDFESSSRSGG-------SKSKEDNKSVVDVEHQDRDS-- 68
Query: 90 AGDKKSNDHQEPPKHSAQPPRSRSYYQHA----ERGNTEQVGRSAGRREAGGKAFAQSKE 145
K+ D +E S+ R + A G+ + S R ++GG+ + S E
Sbjct: 69 ---KRERDGRERTHGSSSDSSKRKRWDEAGGLVNDGDHKSSKLSDSRHDSGGERVSVSNE 125
Query: 146 NSE-----RVETSQSREQRDEKSQAK--LDDN-------LHRRDGSPERKDDPPSNTRKR 191
+ E + + S RDEKS+++ DD+ +DGS ++ SN K
Sbjct: 126 HGESRRDLKSDRSLKTSSRDEKSKSRGVKDDDRGSPLKKTSGKDGSEVVREVGRSNRSKT 185
Query: 192 P---------AFREKKIQG-DSGDANPAVSTERVKASHTDHPPERNERKEERS------G 235
P + ++++ +G D G ++ E +K + ++ ++ G
Sbjct: 186 PDADYEKEKYSRKDERSRGRDDGWSDRDRDQEGLKDNWKRRHSSSGDKDQKDGDLLYDRG 245
Query: 236 NPRHLERHEKQIA-GDRAPNRSEGRRDGFSSRA-RYGGSGGNNND 278
R R ++ + G+R+ R GR+DG A + SGG +N+
Sbjct: 246 REREFPRQGRERSEGERSHGRLGGRKDGNRGEAVKALSSGGVSNE 290
>At3g23900 unknown protein
Length = 989
Score = 52.4 bits (124), Expect = 3e-07
Identities = 66/258 (25%), Positives = 100/258 (38%), Gaps = 41/258 (15%)
Query: 4 RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGA 63
+ D +L+H K + S R R D + R+ R+ D +++ +R R R N
Sbjct: 671 KSRDEELKHHK---KRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDN----- 722
Query: 64 GGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNT 123
G D Q N HSK+ S KS D K RSRS
Sbjct: 723 -GSHENVDVAQDNDLNSRHSKRRS------KSLDEDYDMKERRGRSRSRSL--------- 766
Query: 124 EQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD 183
E ++ ++K + +R S+ R R + + K N R S ++K
Sbjct: 767 ----------ETKNRSSRKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETR--SRDKKSK 814
Query: 184 PPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERH 243
S R R E K QG ++P S E+ K+ H H R+ K+ S + R +RH
Sbjct: 815 RRSGRRSRSPSSEGK-QGRDIRSSPGYSDEK-KSRHKRHSRSRSIEKKNSSRDKRS-KRH 871
Query: 244 EKQIAGDRAPNRSEGRRD 261
E+ +P R + R D
Sbjct: 872 ER--LRSSSPGRDKRRGD 887
Score = 40.0 bits (92), Expect = 0.002
Identities = 58/283 (20%), Positives = 106/283 (36%), Gaps = 39/283 (13%)
Query: 11 RHSKFDREPSPKRYRR----DGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGD 66
R + R SP RY+R +G++ RD RD R R + ++
Sbjct: 541 RRPRSHRSRSPLRYQRRSTYEGRRRSYRD-SRDISESRRYGRSDEHHSSSSRRSRSVSPK 599
Query: 67 QNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTE-Q 125
+ + ++ L +++S G+KKS+ + ++ PR R + R + E +
Sbjct: 600 KRKSGQEDSELS---RLRRDSSSRGEKKSS------RAGSRSPRRRKEVKSTPRDDEENK 650
Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
V R R + A K+ S E +++ +S+ +D RD S ++
Sbjct: 651 VKRRTRSRSRSVEDSADIKDKSRDEELKHHKKRSRSRSR---EDRSKTRDTS---RNSDE 704
Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEK 245
+ + R R + ++ D+G SH E + ++ N RH +R K
Sbjct: 705 AKQKHRQRSRSRSLENDNG-------------SH-----ENVDVAQDNDLNSRHSKRRSK 746
Query: 246 QIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQ 288
+ D GR S + S N D R+ + R+
Sbjct: 747 SLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRR 789
Score = 34.3 bits (77), Expect = 0.096
Identities = 28/97 (28%), Positives = 42/97 (42%), Gaps = 9/97 (9%)
Query: 7 DSKLRHSKFDREPSPKRYRRDGKQDRERD-RDRDRERERGSERGRDRDRVTTNGGGGAGG 65
+ K RH + R S + K++ RD R + ER R S GRD+ R + +
Sbjct: 843 EKKSRHKRHSRSRSIE------KKNSSRDKRSKRHERLRSSSPGRDKRRGDRSLSPVSSE 896
Query: 66 DQNPTDRDQ--RNLPPPPHSKQESVGAGDKKSNDHQE 100
D R +++ PHS E V GD S+ Q+
Sbjct: 897 DHKIKKRHSGSKSVKEKPHSDYEKVDDGDANSDSSQQ 933
>At2g16940 splicing factor like protein
Length = 561
Score = 51.2 bits (121), Expect = 8e-07
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 20/158 (12%)
Query: 3 HRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGG 62
HR K R D + +R +R R R RDR+R+R R S RDRDR
Sbjct: 44 HRGDKKKER----DEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDR-------- 91
Query: 63 AGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERG- 121
+ D+++RN + + D K DH++ ++ R Q E+
Sbjct: 92 ----EKDVDKEERNGKDRERDRDKD---RDSKGRDHEKDRSRRSRSRSERHRSQEREKSL 144
Query: 122 NTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQR 159
E R R+ + KE+ E R+QR
Sbjct: 145 EIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182
Score = 38.5 bits (88), Expect = 0.005
Identities = 44/180 (24%), Positives = 72/180 (39%), Gaps = 17/180 (9%)
Query: 81 PHSKQE-SVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKA 139
PH + E G GD+K S RSRS ++ E+ GRR ++
Sbjct: 16 PHLENEVGNGGGDEKVK--------SEGKERSRSSRHRGDK-KKERDEDEDGRRSKRSRS 66
Query: 140 FAQSKENS-ERVETSQSREQRDEKSQAKLD-DNLHRRDGSPERKDDPPSNTRKRPAFREK 197
+S+ ER SRE RD + +D + + +D +R D S R R +
Sbjct: 67 HHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKDRSR 126
Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSE 257
+ + S S ER K+ + P+ E K+ RH ++ E ++ + P R +
Sbjct: 127 RSRSRSERHR---SQEREKSLEIE--PKERETKDRDRDRRRHKDKKEDKVEPEADPERDQ 181
Score = 35.8 bits (81), Expect = 0.033
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 19/124 (15%)
Query: 137 GKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFRE 196
G K SE E S+S R +K + + +D DG ++ +R R R+
Sbjct: 23 GNGGGDEKVKSEGKERSRSSRHRGDKKKERDEDE----DGRRSKRSRSHHRSRSRDRERD 78
Query: 197 KKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRS 256
+ R H D E++ KEER+G R +R + + + R +
Sbjct: 79 R---------------HRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRDHEKD 123
Query: 257 EGRR 260
RR
Sbjct: 124 RSRR 127
>At3g49600 putative protein
Length = 1672
Score = 50.8 bits (120), Expect = 1e-06
Identities = 64/327 (19%), Positives = 129/327 (38%), Gaps = 32/327 (9%)
Query: 5 DSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAG 64
D D RH K + S KR D + E RDR R R + +GR ++ + + +
Sbjct: 206 DVDVVKRHKK---KESKKRRHDDSSESDEHGRDR-RRRSKKKAKGRKQESESDSSSSDSE 261
Query: 65 GDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTE 124
D + D +R P +K + K+S + S + R ++ + N
Sbjct: 262 SDSDSDDGKKRGRKKP--TKTTKKRSRRKRSVSSESEEVESDDSKKLRKSHKKSLPSN-- 317
Query: 125 QVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD- 183
+G +E K QS+ +R ++ S + ++ Q R G +++DD
Sbjct: 318 ----RSGSKELRDKHDEQSRAGRKRHDSDVSEPESEDNKQPLRKKEEAYRGGQKQKRDDE 373
Query: 184 --PPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTD-HPPERNERKEERSGNPRH- 239
+ + R +KK DS D+ ++ S + + +++++E +H
Sbjct: 374 DVEADHLKDRYTRDDKKAARDSDDSEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHG 433
Query: 240 -----LERHEKQIAGD------RAPNRSEGRRDGFSSRARYGGSGGNNND-RGRDKF--- 284
+ K++A D NR + + + + ++ +ND GRD++
Sbjct: 434 KDKYRSDSRGKEVARDSDDSEAEYENRKKLKNESYQRGRKHKREEDEDNDNHGRDRYRGD 493
Query: 285 NARQGYHPIKTRTEKWKHDLFQEADND 311
+A + Y IK ++++ +E +D
Sbjct: 494 DAVKRYGTIKEDDDRYRGRAIEEEGDD 520
Score = 43.5 bits (101), Expect = 2e-04
Identities = 77/352 (21%), Positives = 126/352 (34%), Gaps = 49/352 (13%)
Query: 3 HRDSDSKLRHSKFDREPSPKRYRRDGKQ---------DRERDRDRDRERERGSERGRDRD 53
H DS H + DR K+ + KQ D E D D D ++RG ++
Sbjct: 223 HDDSSESDEHGR-DRRRRSKKKAKGRKQESESDSSSSDSESDSDSDDGKKRGRKKPTKTT 281
Query: 54 RVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQ-ESVGAGDKKSNDHQEPPKHSAQPPRSR 112
+ + + + D H K S +G K+ D + + + R
Sbjct: 282 KKRSRRKRSVSSESEEVESDDSKKLRKSHKKSLPSNRSGSKELRDKHDEQSRAGR-KRHD 340
Query: 113 SYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETS--QSREQRDEKSQAKLDDN 170
S E + +Q R GG+ + K + E VE + R RD+K A+ D+
Sbjct: 341 SDVSEPESEDNKQPLRKKEEAYRGGQ---KQKRDDEDVEADHLKDRYTRDDKKAARDSDD 397
Query: 171 ----------------LHRRDGSPERKDDPPSNTRKRPAFRE----KKIQGDSGDANPAV 210
++ S +RK++ + +R K++ DS D+ A
Sbjct: 398 SEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHGKDKYRSDSRGKEVARDSDDSE-AE 456
Query: 211 STERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNR-SEGRRDGFSSRARY 269
R K + + R ++EE N H + GD A R + D R R
Sbjct: 457 YENRKKLKNESYQRGRKHKREEDEDNDNH---GRDRYRGDDAVKRYGTIKEDDDRYRGRA 513
Query: 270 GGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKH--DLFQEADNDPVPKNEDD 319
G ++DRGR R +K E++KH D ++ K +DD
Sbjct: 514 IEEEG-DDDRGR----YRPRRESVKDDEEEYKHGRDRYRGDGRRATGKEDDD 560
>At1g70620 unknown protein
Length = 897
Score = 50.8 bits (120), Expect = 1e-06
Identities = 55/242 (22%), Positives = 96/242 (38%), Gaps = 31/242 (12%)
Query: 17 REPSPKRYRRDGKQDRERDRDRDRERERGSERG----RDRDRVTTNGGGGA----GGDQN 68
R+ S K Y +D + DR R E + G E+G +DR+ N A G + N
Sbjct: 674 RQDSNKPYGKDLSDEVSTDRSRIVETKGGKEKGDSQNDSKDRMKENDLKSAEKVKGVESN 733
Query: 69 PTDRDQRNLPPPPHSKQES--VGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQV 126
D PH K++S V + ++ + + RS ++ AE + ++
Sbjct: 734 KKSTD-------PHVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKR 786
Query: 127 GRSAGRREAGGKAFAQSKENSERVETS--QSREQRDEKSQAKLDDNLHRRDGSPERKDDP 184
RS E+ + +S+ V S +SR +R S + D+ R+ S + P
Sbjct: 787 RRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSP 846
Query: 185 -PSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERH 243
P +R+R S + + ++ ++ H R++R RS +P RH
Sbjct: 847 SPGKSRRRHV---------SSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPH--RRH 895
Query: 244 EK 245
K
Sbjct: 896 RK 897
Score = 35.4 bits (80), Expect = 0.043
Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 9/161 (5%)
Query: 12 HSKFDREPSPKRYRRDGKQDR------ERDRDRDRERERGSERGRDRDRVTTNGGGGAGG 65
H K D + +R + K+DR E++ +R R R + R R T+
Sbjct: 740 HVKKDSRDVERPHRTNSKEDRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDS 799
Query: 66 DQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQ 125
+ R + P P S+++ +S+D + S + RS S + R
Sbjct: 800 KRKSRSRRRSVSPSPVRSRRKRSSPSSDESSDDSKRKSSSKRKNRSPSPGKSRRR---HV 856
Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAK 166
RS + + K S + R + S+SR + + K
Sbjct: 857 SSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPHRRHRK 897
>At5g16780 putative protein
Length = 820
Score = 50.4 bits (119), Expect = 1e-06
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 12/206 (5%)
Query: 6 SDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGG 65
S ++R + D E SP R RDG++ + R +D+E++ E+ RD+D
Sbjct: 8 SRHEIREERADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDH----------R 57
Query: 66 DQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQ 125
+RD++ K+ S G ++ D + R+ +H +R N
Sbjct: 58 RDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERN--RHKDRENERD 115
Query: 126 VGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
+ + A K A K + + ET ++ E+ + L++ D + K+
Sbjct: 116 NEKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDNRGLNEGGDNVDAASSGKEASA 175
Query: 186 SNTRKRPAFREKKIQGDSGDANPAVS 211
+ + R ++ + + DA+ A+S
Sbjct: 176 LDLQNRILKMREERKKKAEDASDALS 201
Score = 44.7 bits (104), Expect = 7e-05
Identities = 55/233 (23%), Positives = 94/233 (39%), Gaps = 30/233 (12%)
Query: 4 RDSDSKLRHSKFDREP-SPKRYRRDGKQ--DRERDRDRDRERE----RGSERGRD--RDR 54
+D SK + +DRE K +RRD ++ DR+R RD D E+E R ER +D RDR
Sbjct: 35 KDHRSKDKEKDYDREKIRDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDR 94
Query: 55 VTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSY 114
V + ++ N + KKS++ + +A+
Sbjct: 95 VKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETHKAAE------R 148
Query: 115 YQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRR 174
Y+H++ + G + +G +A A +N + RE+R +K++ D +
Sbjct: 149 YEHSDNRGLNEGGDNVDAASSGKEASALDLQN----RILKMREERKKKAE---DASDALS 201
Query: 175 DGSPERKDDPPSNTRKRPAFREKKI--------QGDSGDANPAVSTERVKASH 219
+ RK + N K+ A + +I QG++ D VK H
Sbjct: 202 WVARSRKIEEKRNAEKQRAQQLSRIFEEQDNLNQGENEDGEDGEHLSGVKVLH 254
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/154 (24%), Positives = 59/154 (37%), Gaps = 11/154 (7%)
Query: 132 RREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPER-------KDDP 184
R + G + ++ + + +S+++ + + K+ D HRRD ER +D
Sbjct: 16 RADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDHRRDKEKERDRKRSRDEDTE 75
Query: 185 PSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHE 244
+R R REK S D E+ + H D ER+ KE+ R ER
Sbjct: 76 KEISRGRDKEREKD---KSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERAS 132
Query: 245 KQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNND 278
K+ D R S R GG+N D
Sbjct: 133 KKSHEDDDETHKAAERYEHSDN-RGLNEGGDNVD 165
>At3g26560 ATP-dependent RNA helicase, putative
Length = 1168
Score = 49.3 bits (116), Expect = 3e-06
Identities = 61/256 (23%), Positives = 94/256 (35%), Gaps = 34/256 (13%)
Query: 4 RDSDSKLRH--SKFDREPSPKRYRRDGKQDRER-----DRDRDRERERGSERGRDRDRVT 56
+D+ K++ + +RE +R D +DR+R DRDRDR R+R R R RDR
Sbjct: 101 KDTKDKVKELEKEIEREAEERRREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDR-- 158
Query: 57 TNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY- 115
G G+ +DR R + E + +++ E K A P Y
Sbjct: 159 ERNRGDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRRAKDEYVEEDKGGANEPELYQVYK 218
Query: 116 ----------------QHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQR 159
+ + V + A RR K F + ++ V+ +
Sbjct: 219 GRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVK-RDMEVYVKVISISSDK 277
Query: 160 DEKSQAKLDDNLHRRDGSPERK-DDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKAS 218
S +D N RD P RK D ++R P++R K D +S R+
Sbjct: 278 YSLSMRDVDQNT-GRDLIPLRKPSDEDDSSRSNPSYRTK----DGQVTKTGISGIRI-VE 331
Query: 219 HTDHPPERNERKEERS 234
D P R K+ S
Sbjct: 332 ENDVAPSRRPLKKMSS 347
Score = 33.1 bits (74), Expect = 0.21
Identities = 21/68 (30%), Positives = 28/68 (40%), Gaps = 7/68 (10%)
Query: 216 KASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGN 275
+ S D +RN +++R R ER+ R E RR R R G GG
Sbjct: 134 RESGRDRDRDRNRDRDDRRDRHRDRERN-------RGDEEGEDRRSDRRHRERGRGDGGE 186
Query: 276 NNDRGRDK 283
DR RD+
Sbjct: 187 GEDRRRDR 194
>At2g18540 putative vicilin storage protein (globulin-like)
Length = 699
Score = 49.3 bits (116), Expect = 3e-06
Identities = 45/240 (18%), Positives = 88/240 (35%), Gaps = 23/240 (9%)
Query: 13 SKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDR 72
+K E +R +R+ ++ R+R+ +R RE E R +R + +
Sbjct: 459 AKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKK-------------REEEA 505
Query: 73 DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGR 132
+Q K+E + K + + K + R R Q +R E R R
Sbjct: 506 EQARKREEEREKEEEMA----KKREEERQRKEREEVERKRREEQERKRREEEARKREEER 561
Query: 133 REAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRP 192
+ A + +E + R+ R+E+ + + ++ RR+ ++K+ +KR
Sbjct: 562 KREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKRE 621
Query: 193 AFREK------KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQ 246
K KI+ + ER + E ++EE + ER +K+
Sbjct: 622 EEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKE 681
Score = 44.7 bits (104), Expect = 7e-05
Identities = 38/213 (17%), Positives = 88/213 (40%), Gaps = 12/213 (5%)
Query: 110 RSRSYYQHAERGNTEQVG---RSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAK 166
R R + ER E+ R +R +A + +E +ER + + ++ E+ + +
Sbjct: 427 RKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKR 486
Query: 167 LDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPER 226
++ RR+ +++++ RKR REK+ + ER + +
Sbjct: 487 EEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQE 546
Query: 227 NERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNA 286
+R+EE + + E+++A R R R+ + R +R R++ A
Sbjct: 547 RKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIR------EEQERKREEEMA 600
Query: 287 RQGYHPIKTRTEKWKHDLFQEADNDPVPKNEDD 319
++ + R +K + ++ ++ + K E++
Sbjct: 601 KRRE---QERQKKEREEMERKKREEEARKREEE 630
Score = 40.4 bits (93), Expect = 0.001
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 16/178 (8%)
Query: 92 DKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVE 151
+ K + +E + + +R + +R E R R++ +A K ER +
Sbjct: 458 EAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREK 517
Query: 152 TSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVS 211
+ ++R+E+ Q K + + R+ + + RKR R++
Sbjct: 518 EEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKR-------------- 563
Query: 212 TERVKASHTDHPPERNERKE-ERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRAR 268
E A + +R ER+E ER + E+++A R R + R+ + R
Sbjct: 564 -EEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKR 620
Score = 37.7 bits (86), Expect = 0.009
Identities = 49/295 (16%), Positives = 114/295 (38%), Gaps = 37/295 (12%)
Query: 13 SKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDR 72
SK RE +R RR+ ++ R ++ + R+R + R+ + ++ T+R
Sbjct: 418 SKLMREIE-ERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRR-------EEEETER 469
Query: 73 DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGR 132
+R ++++ +E K + + R ER E+ A +
Sbjct: 470 KKRE---------------EEEARKREEERKREEEEAKRRE----EERKKREEEAEQARK 510
Query: 133 REAGGKAFAQSKENSERVETSQ-------SREQRDEKSQAKLDDNLHRRDGSPERKDDPP 185
RE + + + +R E Q R++R+E+ + + ++ +R+ +R+++
Sbjct: 511 REEEREK--EEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMA 568
Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKE-ERSGNPRHLERHE 244
+ +E++ E A + ++ ER+E ER + E
Sbjct: 569 KRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKRE 628
Query: 245 KQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEK 299
+++A R R R+ + R + +R R++ A++ + + E+
Sbjct: 629 EEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEE 683
Score = 37.0 bits (84), Expect = 0.015
Identities = 31/184 (16%), Positives = 70/184 (37%), Gaps = 6/184 (3%)
Query: 8 SKLRHSKFDREPSPKRYRRDGKQDRERD-----RDRDRERERGSERGRDRDRVTTNGGGG 62
++ R + ++E + R + +Q +ER+ R ++ER+R E R R+
Sbjct: 508 ARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEM 567
Query: 63 AGGDQNPTDRDQRN-LPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERG 121
A + R +R + +QE + QE K + + + A +
Sbjct: 568 AKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEARKR 627
Query: 122 NTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERK 181
E R+ + + K E + +R+E++ + ++ +++ E++
Sbjct: 628 EEEMAKIREEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEKR 687
Query: 182 DDPP 185
PP
Sbjct: 688 RWPP 691
Score = 32.7 bits (73), Expect = 0.28
Identities = 27/123 (21%), Positives = 47/123 (37%), Gaps = 3/123 (2%)
Query: 138 KAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREK 197
K ++++ S E + E K ++++ R + ER+ RKR K
Sbjct: 395 KGLLKAQKESVIFECASCAEGELSKLMREIEERKRREEEEIERRRKEEEEARKRE--EAK 452
Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEER-SGNPRHLERHEKQIAGDRAPNRS 256
+ + + TER K + ERK E R ER +++ ++A R
Sbjct: 453 RREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKRE 512
Query: 257 EGR 259
E R
Sbjct: 513 EER 515
>At4g37820 unknown protein
Length = 532
Score = 48.5 bits (114), Expect = 5e-06
Identities = 42/219 (19%), Positives = 87/219 (39%), Gaps = 15/219 (6%)
Query: 28 GKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQES 87
G Q + + D + + E + ++ + D++ ++ +R K+ES
Sbjct: 289 GYQQTKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESKEEKPERK------KKEES 342
Query: 88 VGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENS 147
G+ K +EP K + S+ + E N E+ S+ + + KE S
Sbjct: 343 SSQGEGKE---EEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEES 399
Query: 148 ERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDAN 207
E ++++E + S+++ +N + + + SNT+K + + + +SG+
Sbjct: 400 SSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDT 459
Query: 208 PAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQ 246
TE D +E+KEE + N E +Q
Sbjct: 460 SNKETE------DDSSKTESEKKEENNRNGETEETQNEQ 492
Score = 43.9 bits (102), Expect = 1e-04
Identities = 39/216 (18%), Positives = 84/216 (38%), Gaps = 12/216 (5%)
Query: 14 KFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRD 73
K + + GK +++ +D +E ER + + + G G ++ P R+
Sbjct: 302 KVQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEE----SSSQGEGKEEEPEKRE 357
Query: 74 QRNLPPPPHSKQESVGAGDKKSNDHQEP---PKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
+ + SK+E +K+++ QE + + S + E TE+ +
Sbjct: 358 KEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSES 417
Query: 131 GRRE-AGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRR----DGSPERKDDPP 185
R+E + + E+++ T + EQ+ ++S+ + ++ + D S +
Sbjct: 418 QRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKTESEKKE 477
Query: 186 SNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTD 221
N R + Q + A T+ VK + TD
Sbjct: 478 ENNRNGETEETQNEQEQTKSALEISHTQDVKDARTD 513
Score = 37.0 bits (84), Expect = 0.015
Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 17/235 (7%)
Query: 95 SNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQ 154
S+ + E P+ + + + + + G+S G ++ + + K S E+
Sbjct: 253 SDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESKV 312
Query: 155 SREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTER 214
++EK + D E K++ P +K E QG+ + P +
Sbjct: 313 KESGKNEKDASSSQD---------ESKEEKPERKKK----EESSSQGEGKEEEPEKREKE 359
Query: 215 VKASHTDHPPERNERKE-ERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSG 273
+S + E E KE E S + E E +I + EG + + + S
Sbjct: 360 DSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEG-NENKETEKKSSESQ 418
Query: 274 GNNNDRGRDKFNARQGYHPIKTR--TEKWKHDLFQEADNDPVPKNEDDQIAKLEA 326
N K + T+ E+ + +E+ ND K +D +K E+
Sbjct: 419 RKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGNDTSNKETEDDSSKTES 473
>At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA
helicase
Length = 733
Score = 47.4 bits (111), Expect = 1e-05
Identities = 32/101 (31%), Positives = 49/101 (47%), Gaps = 14/101 (13%)
Query: 6 SDSKLRHSKFDREPSPKRY-------RRDGKQDRERDRDRDRERERGSERGRDRDRVTTN 58
S+ ++R + R P P+ RD +DR+RDRDR+R+R+R +RGRDRDR
Sbjct: 46 SEQRVRREQLGR-PEPETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDRDR 104
Query: 59 GGGGAGGDQNPTDRDQRNLPPPP------HSKQESVGAGDK 93
+ +RD+R P ++E V A +K
Sbjct: 105 DRDRDRERERDRERDRRERDREPDRRNREKEREEEVKAREK 145
Score = 45.8 bits (107), Expect = 3e-05
Identities = 49/195 (25%), Positives = 86/195 (43%), Gaps = 23/195 (11%)
Query: 2 SHRDSDSKLRHSKFDREPSPKRYRRDGK-QDRERDRDRDRERERGSERGRD---RDRVTT 57
++RD D R DRE R R G+ +DR+RDRDRDR+RER +R RD RDR
Sbjct: 70 TNRDKDRD-RDRDRDRERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREPD 128
Query: 58 NGGGGAGGDQNPTDRDQRNLPP-PPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQ 116
++ R++ + K++ + A ++ ++P K +P S +
Sbjct: 129 RRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRP--SEKFRF 186
Query: 117 HAERGNTEQVGRS-----AGRREAG---GKAFAQSKENSERVETSQSREQRDEKSQAKLD 168
+ NTE R EA G+ F + E ++++ K + ++
Sbjct: 187 SFDWENTEDTSRDMNVLYQNPHEAQLLFGRGFRAGMDRRE-------QKKQAAKHEKEMR 239
Query: 169 DNLHRRDGSPERKDD 183
D + ++DG E+ ++
Sbjct: 240 DEIRKKDGIVEKPEE 254
Score = 30.8 bits (68), Expect = 1.1
Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 14/165 (8%)
Query: 124 EQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDD 183
+Q+ RRE G+ ++++ S RD + D + R G +D
Sbjct: 43 DQISEQRVRREQLGRPEPETEDVSNGDTNRDKDRDRDRDRDRERDRDRERDRGRDRDRDR 102
Query: 184 PPSNTRKRPAFREKKIQGDSGDANP------AVSTERVKASHTDHPPERNERKEERSGNP 237
R R R+++ D P E VKA + ER++E
Sbjct: 103 DRDRDRDRERERDRERDRRERDREPDRRNREKEREEEVKAREKARVEKLVEREKE----- 157
Query: 238 RHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRD 282
+ L+ ++Q G + P + R S + R+ N D RD
Sbjct: 158 KELDAIKEQYLGGKKPKKRVIRP---SEKFRFSFDWENTEDTSRD 199
Score = 30.8 bits (68), Expect = 1.1
Identities = 51/225 (22%), Positives = 79/225 (34%), Gaps = 69/225 (30%)
Query: 4 RDSDSKLRHSKFDREPSPKRYR---RDGKQDRERDRDRDRERERGS-------------- 46
RD D R DRE R R RD +DR+R+R+RDRER+R
Sbjct: 80 RDRD---RERDRDRERDRGRDRDRDRDRDRDRDRERERDRERDRRERDREPDRRNREKER 136
Query: 47 ------------------ERGRDRDRVTTNGGGGAGGDQN------------------PT 70
E+ ++ D + GG + T
Sbjct: 137 EEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDT 196
Query: 71 DRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSA 130
RD L PH Q G G + D +E K +A+ E+ +++ +
Sbjct: 197 SRDMNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAK----------HEKEMRDEIRKKD 246
Query: 131 GRREAGGKAFAQSKENSERVETSQSREQRDEK--SQAKLDDNLHR 173
G E +A AQ + E +T S + R ++ S +L++ R
Sbjct: 247 GIVEKPEEAAAQ-RVREEAADTYDSFDMRVDRHWSDKRLEEMTER 290
>At4g36690 splicing factor like protein
Length = 573
Score = 46.6 bits (109), Expect = 2e-05
Identities = 58/210 (27%), Positives = 79/210 (37%), Gaps = 51/210 (24%)
Query: 18 EPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNL 77
+ PKR RD +RE R +DRERE+G ++ R+RD + + DRD
Sbjct: 34 DSKPKRESRD--HERETSRSKDREREKGRDKDRERDSEVS---------RRSRDRDGEK- 81
Query: 78 PPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHA-ERGNTEQVGRSAGRREAG 136
SK+ S K DH+E +H RS + H+ ERG RRE G
Sbjct: 82 -----SKERS----RDKDRDHRE--RHH----RSSRHRDHSRERGE---------RRERG 117
Query: 137 GKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRD--GSPERKDDPPSNTRKRPAF 194
G+ + R RD + DD RR KD TR R
Sbjct: 118 GR------------DDDDYRRSRDRDHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPS 165
Query: 195 REKKIQGDSGDANPAVSTERVKASHTDHPP 224
+ K+ A PA + A+ T P
Sbjct: 166 KSKQRVSGFDMAPPASAMLAAGAAVTGQVP 195
Score = 41.2 bits (95), Expect = 8e-04
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 4 RDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGA 63
RDS+ R D E S +R R + RER R R+ ERG R+R GG
Sbjct: 66 RDSEVSRRSRDRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRER------GGR 119
Query: 64 GGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNT 123
D RD+ H ++ G + S + RSRS + +R +
Sbjct: 120 DDDDYRRSRDR------DHDRRRDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSG 173
Query: 124 EQVGRSAGRREAGGKA 139
+ A A G A
Sbjct: 174 FDMAPPASAMLAAGAA 189
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/166 (24%), Positives = 70/166 (41%), Gaps = 37/166 (22%)
Query: 5 DSDSKLRHSKFDREPSPKRYRRDGK---QDRERD-----RDRDRERERGSERGRDRDRVT 56
DS K +RE S + R K +DRERD R RDR+ E+ ER RD+DR
Sbjct: 34 DSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDR-- 91
Query: 57 TNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQ 116
+ +R R+ HS++ G+++ ++ Y +
Sbjct: 92 -----------DHRERHHRSSRHRDHSRER----GERRERGGRD----------DDDYRR 126
Query: 117 HAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEK 162
+R + + GRR ++ ++SK+ SER S+S + ++
Sbjct: 127 SRDRDHDRRRDDRGGRRSR--RSRSRSKDRSERRTRSRSPSKSKQR 170
Score = 36.2 bits (82), Expect = 0.025
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 145 ENSERVETSQSREQRD---EKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQG 201
E +++++ RE RD E S++K + RD ER + +R R + K+
Sbjct: 28 EIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSR 87
Query: 202 DSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRR 260
D D + R + H DH ER ER+ ER G R + DR + GRR
Sbjct: 88 DK-DRDHRERHHR-SSRHRDHSRERGERR-ERGGRDDDDYRRSRDRDHDRRRDDRGGRR 143
>At3g47270 putative protein
Length = 671
Score = 46.2 bits (108), Expect = 2e-05
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 31/224 (13%)
Query: 21 PKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPP 80
P Y R+ + +E D +++E E+ E G++ + G D+R
Sbjct: 287 PASYTRE--EQKEEDEKKEQEEEKQEEEGKEEELEKVEYRG-----------DERT---- 329
Query: 81 PHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAF 140
KQE GD++ +E K + + G +Q G E G+
Sbjct: 330 --EKQEIPKQGDEEMEGEEEKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEE 387
Query: 141 AQSKENSERVE----------TSQSREQRDEKSQAKLDDNLHRRDGSPE--RKDDPPSNT 188
Q +E E E T E +++ + D+ + R +G E + D T
Sbjct: 388 KQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREEGKEENVEEHDEHDET 447
Query: 189 RKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEE 232
+ A+ D+G A ++ K T+ P E N + +
Sbjct: 448 EDQKAYVILSDDEDNGTAPTEKESQPQKEETTEVPKEENVEEHD 491
Score = 33.9 bits (76), Expect = 0.13
Identities = 38/191 (19%), Positives = 70/191 (35%), Gaps = 33/191 (17%)
Query: 104 HSAQPPRSRSYYQHAER--GNTEQVGRSAGRREA--GGKAFAQSKENSERVETSQSREQR 159
H ++ +S S+ + + N E + + GR E G + S E+ E + +EQ
Sbjct: 246 HQSRKRKSMSFGEKVKLVYENCEVLKKKVGRLEGYLGIQRVPASYTREEQKEEDEKKEQE 305
Query: 160 DEKSQAK-----LDDNLHRRDGSPERKDDPPSNTRKRPAFREKK-------------IQG 201
+EK + + L+ +R D E+++ P + EK+ +G
Sbjct: 306 EEKQEEEGKEEELEKVEYRGDERTEKQEIPKQGDEEMEGEEEKQKEEGKEEEEEKVEYRG 365
Query: 202 DSGDANPAVSTERVKASHTDHPPERNERKEER-----------SGNPRHLERHEKQIAGD 250
D G + + + + + E KEE + N E+ E GD
Sbjct: 366 DEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRDHHSTCNVEETEKQENPKQGD 425
Query: 251 RAPNRSEGRRD 261
R EG+ +
Sbjct: 426 EEMEREEGKEE 436
Score = 28.1 bits (61), Expect = 6.9
Identities = 28/157 (17%), Positives = 54/157 (33%), Gaps = 29/157 (18%)
Query: 198 KIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHE------------- 244
+++G G S R + D E+ E K+E G LE+ E
Sbjct: 276 RLEGYLGIQRVPASYTREEQKEEDEKKEQEEEKQEEEGKEEELEKVEYRGDERTEKQEIP 335
Query: 245 ----KQIAGDRAPNRSEGRRDGFSSRARYGGSG---------GNNNDRGRDKFNARQGYH 291
+++ G+ + EG+ + G G G+ G ++ +G
Sbjct: 336 KQGDEEMEGEEEKQKEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKE 395
Query: 292 PIKTRTEKWKHDL---FQEADNDPVPKNEDDQIAKLE 325
+ + E H +E + PK D+++ + E
Sbjct: 396 EEEEKVEYRDHHSTCNVEETEKQENPKQGDEEMEREE 432
>At2g29210 proline-rich protein like
Length = 878
Score = 46.2 bits (108), Expect = 2e-05
Identities = 62/282 (21%), Positives = 105/282 (36%), Gaps = 36/282 (12%)
Query: 3 HRDSDSKLRHSKFDREPSP--KRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGG 60
H+ + S +R R P+P +R RR R DR R R R R +
Sbjct: 574 HQKARSPVRR----RSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSPPVLHRS 629
Query: 61 GGAGGDQNPTDR--------DQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSR 112
G ++ +R +Q + K+ SV DK+ ++ P+ + R
Sbjct: 630 PSPRGRKHQRERRSPGRLSEEQDRVQNSKLLKRTSVPDTDKR----KQLPEKLLEVGRVE 685
Query: 113 SYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSR--EQRDEKSQAKLDDN 170
Y + + + RS R + ++ E R +S+ + EQ +++ + LD N
Sbjct: 686 HYKEQERKSDKLSEKRSVHRHHGSQMSPVENSEGRSRPVSSKVKDSEQVEKEDNSDLDAN 745
Query: 171 LHRRDGSPERKDDPPSNTRK-RPAFREKKIQGDSGDANPAVSTERV------------KA 217
L R N RK + + RE+ D+G ++ V + K
Sbjct: 746 LSCDSKDTIRHQIKDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEEKKTRKE 805
Query: 218 SHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGR 259
ER+ ++EER G E+H+KQ D + E R
Sbjct: 806 EKKRRREERHRKREERRGGK---EKHKKQELSDTSEGEVEAR 844
Score = 42.0 bits (97), Expect = 5e-04
Identities = 66/293 (22%), Positives = 104/293 (34%), Gaps = 33/293 (11%)
Query: 1 MSHRDSDSK-LRHSKFDREPSPKRYRR----DGKQDRERDRDRDRERERGSERGRDRDRV 55
M R+ D K + H + S ++ D K R+R D R E+ + R RD +
Sbjct: 141 MKKREGDKKNIEHDILRKIDSGVEHKETNGMDAKPSRDRPEDGRRADEKNGVKERRRDLI 200
Query: 56 TTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYY 115
G + ++P + +S +S +G++KS + S PR R
Sbjct: 201 PPRRGDAS---RSPLRGSRSRSISKTNSGSKSY-SGERKSRSTSQSSDASIS-PRKRRLS 255
Query: 116 QHAERGNTEQVGRSAGRREAGGKAFAQSKENS----ERVETSQSREQRDEKSQAKLDDNL 171
R + V RS R + +S+ S R T + R Q S+
Sbjct: 256 NSRRRSRSRSVRRSLSPRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSR------- 308
Query: 172 HRRDGSP----ERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERN 227
RR SP R PP+ R+ P+ ++ + + A S H PP R
Sbjct: 309 RRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQRRSPSPPARRHRSPPPARR 368
Query: 228 ER------KEERSGNPRHLERHEKQ--IAGDRAPNRSEGRRDGFSSRARYGGS 272
R + RS +P R +R+P+ R S A+ G S
Sbjct: 369 RRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSPLYRRNRSRSPLAKRGRS 421
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.307 0.128 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,118,822
Number of Sequences: 26719
Number of extensions: 476028
Number of successful extensions: 4228
Number of sequences better than 10.0: 377
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 2400
Number of HSP's gapped (non-prelim): 1025
length of query: 330
length of database: 11,318,596
effective HSP length: 100
effective length of query: 230
effective length of database: 8,646,696
effective search space: 1988740080
effective search space used: 1988740080
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0218.18