BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0211.5
(1428 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20460 putative retroelement pol polyprotein 1090 0.0
At2g16000 putative retroelement pol polyprotein 1083 0.0
At1g70010 hypothetical protein 1062 0.0
At4g17450 retrotransposon like protein 998 0.0
At1g26990 polyprotein, putative 976 0.0
At4g14460 retrovirus-related like polyprotein 961 0.0
At2g23330 putative retroelement pol polyprotein 948 0.0
At2g16670 putative retroelement pol polyprotein 775 0.0
At4g07810 putative polyprotein 740 0.0
At1g31210 putative reverse transcriptase 656 0.0
At1g36620 hypothetical protein 650 0.0
At4g10690 retrotransposon like protein 642 0.0
At4g10990 putative retrotransposon polyprotein 622 e-178
At1g53810 615 e-176
At4g27210 putative protein 604 e-172
At2g06840 putative retroelement pol polyprotein 570 e-162
At3g60170 putative protein 555 e-158
At4g23160 putative protein 543 e-154
At2g13930 putative retroelement pol polyprotein 535 e-151
At1g37110 531 e-151
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 1090 bits (2819), Expect = 0.0
Identities = 604/1444 (41%), Positives = 855/1444 (58%), Gaps = 90/1444 (6%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISV 60
L E Y +W+ AM++SL KNKLGFVDG++ P + P W RCN +V SWL+ S+S
Sbjct: 83 LDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSP 142
Query: 61 EIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWD 120
+I +SIL + ATD+W +L +RF +L R L +EI L+QG S+S++YT +KTLWD
Sbjct: 143 QIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWD 202
Query: 121 ELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPN 180
+LD L + C CG + + K ++++FL GLN+ ++ VR Q++ LP+
Sbjct: 203 QLDSTEAL-----DDPCTCGKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPS 257
Query: 181 VNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGN 240
+ V+ ++ Q Q F NV A E S H+ + QS
Sbjct: 258 LAEVYHILDQDNSQKGFFNVVAPPAAFQVSEVS---------HSPITSPEIMYVQSGPNK 308
Query: 241 NRYSSKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQEN 300
R + CS+C ++GH E CYKKHGFPPGF PK Q ++ +
Sbjct: 309 GRPT---CSFCNRVGHIAERCYKKHGFPPGF---TPKGKSSDKPPKPQAVAAQVTLSPDK 362
Query: 301 ASGQDAARFG-FTADQYHHLLAL----LPPS--ESKASSSQHTASVNSCAQ---VLPTKN 350
+GQ G F+ DQ +L+AL L P + +SSQH AS + +L + +
Sbjct: 363 MTGQLETLAGNFSPDQIQNLIALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPS 422
Query: 351 GNGTSQVLPTRNGNPLDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTI 410
+L + + TW++D+GAT H+ + F + V+LP G +
Sbjct: 423 TYCFIGILAVSHNSLSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISG 482
Query: 411 KGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTV 470
GT+ I IL NVLF+P F NLIS+ L L R+IF+ C IQD +G
Sbjct: 483 VGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEG 542
Query: 471 RAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQ 530
+ + LY+ + S + SVN V S +WH RLGHPS +
Sbjct: 543 KRIGNLYVLDTQSPA---------ISVNAVVDVS-----------VWHKRLGHPSFSRLD 582
Query: 531 SINELFPYVQCS--KAHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLH 588
S++E+ + K+ C VC +AKQK++SFP + + F+L+H+D+WGP S+ ++
Sbjct: 583 SLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVE 642
Query: 589 GFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLP 648
G+ YFLTIVDD+SR TWIYLLKS ++V + F LV NQ++T VK++RSDN KE +
Sbjct: 643 GYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFT 702
Query: 649 QFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLI 708
+FY KGIV SC ETP+QNS+VERKHQHILNVARAL+FQ+++ +W ++ AVFLI
Sbjct: 703 EFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLI 762
Query: 709 NRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKP 768
NR PS +L K PF++L LPD + LK FG LC++ST R KF PR++ CVFLG+
Sbjct: 763 NRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPF 822
Query: 769 GTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQASFLSDEPFEYAT 828
G KGY + DL+SN + ISRNV FHE +FP + Q++ + + F
Sbjct: 823 GFKGYKLLDLESNVVHISRNVEFHEELFPLASS------------QQSATTASDVF---- 866
Query: 829 QSPSEALTQPN--TSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSK 886
+P + L+ N TS S + + + R K P++LQDYHC + +K
Sbjct: 867 -TPMDPLSSGNSITSHLPSPQISPSTQISKRRITKFPAHLQDYHCYFV----------NK 915
Query: 887 GTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALERNHT 946
S+P+S +SY ++P++ ++ NI+ + P+ Y EA W A+DQEI A+ER T
Sbjct: 916 DDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDT 975
Query: 947 WILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMT 1006
W + P K +GCKWV+ +K+ DG+L+R+KAR+V KGYTQ EG+D+ +TFSPVAKM
Sbjct: 976 WEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMA 1035
Query: 1007 TLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEK-----PNQVCLLQK 1061
T+++LL +++S W+L+QLD+ NAFL+ L+E IYM LP G K PN VC L+K
Sbjct: 1036 TVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKK 1095
Query: 1062 SLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGS-FTALLLYVDDVLLTGN 1120
S+YGLKQASRQW+ +L LGF DHTL+++ GS F LL+YVDD+++
Sbjct: 1096 SIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVR--CIGSEFIVLLVYVDDIVIAST 1153
Query: 1121 DLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGK 1180
Q + E+L A F+++++G K+FLGLE+AR+ GI L+QRKYALELL+ + +L K
Sbjct: 1154 TEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCK 1213
Query: 1181 PTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNV 1240
P++ PM + + + L D YRRL+GKL+YLT TRPDI + VN+L QF SAP
Sbjct: 1214 PSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTA 1273
Query: 1241 HEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLI 1300
H AA ++VL+YIKG G GLFY A+ TL ++D+DW C D+R+S TG+ MF+GSSLI
Sbjct: 1274 HLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLI 1333
Query: 1301 SWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIA 1360
SWRSKKQ T SRSS EAEYRA+A CE+ WLS LL L+ P+ +Y D+ +A++IA
Sbjct: 1334 SWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIA 1392
Query: 1361 HNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLG 1420
NP +HERTKHIE+DCH VREK+ G + LL + + Q+ADI TKPL P F H+ SK+
Sbjct: 1393 TNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMS 1452
Query: 1421 MYDI 1424
+ +I
Sbjct: 1453 IQNI 1456
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 1083 bits (2802), Expect = 0.0
Identities = 601/1446 (41%), Positives = 843/1446 (57%), Gaps = 93/1446 (6%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISV 60
L E NY +W+ AM +SL KNK GF+DGT++ P + W RCN +V SWL+ S+S
Sbjct: 79 LDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSP 138
Query: 61 EIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWD 120
+I +SIL + A+D+W +L RF +L R L +EI +QG S+S++YT +KTLWD
Sbjct: 139 QIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWD 198
Query: 121 ELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPN 180
+LD L + C CG ++ + + ++V+FL GLN+ ++ VR Q++ LP+
Sbjct: 199 QLDSTEAL-----DEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPS 253
Query: 181 VNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGN 240
+ V+ ++ Q Q SF NV A S+ ++ + C +G
Sbjct: 254 LGEVYHILDQDNSQQSFSNVVAPPAAF-----------QVSEITQSPSMDPTVCYVQNGP 302
Query: 241 NRYSSKKCSYCGKMGHTVEDCYKKHGFPPGF--------KFKNPKYAQRSANLAHSTGED 292
N+ CS+ ++GH E CYKKHGFPPGF K + PK +AN+A S+ E
Sbjct: 303 NK-GRPICSFYNRVGHIAERCYKKHGFPPGFTPKGKAGEKLQKPK--PLAANVAESS-EV 358
Query: 293 QDSVDQE--NASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPTKN 350
S++ N S + +F + L PPS +S+ + ++ C + +
Sbjct: 359 NTSLESMVGNLSKEQLQQF---IAMFSSQLQNTPPSTYATASTSQSDNLGICF----SPS 411
Query: 351 GNGTSQVLPTRNGNPLDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTI 410
+L TW++D+GAT H+ + S FSS V+LP G +
Sbjct: 412 TYSFIGILTVARHTLSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISG 471
Query: 411 KGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTV 470
GT+++ +L NVLF+P F NLIS+ L + R+IF+ + C IQD +M+G
Sbjct: 472 VGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQG 531
Query: 471 RAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQ 530
R V LY+ + S SVN V S +WH RLGH SL +
Sbjct: 532 RRVANLYLLD---------VGDQSISVNAVVDIS-----------MWHRRLGHASLQRLD 571
Query: 531 SINELFPYVQCSK--AHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLH 588
+I++ + + C VC +AKQ+++SFP S IF L+H+D+WGP S+ ++
Sbjct: 572 AISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVE 631
Query: 589 GFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLP 648
G+ YFLTIVDD+SR TW+YLLK+ +EV + F V NQ++ VK +RSDN E
Sbjct: 632 GYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFT 691
Query: 649 QFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLI 708
FYA KGIV SC ETP+QNS+VERKHQHILNVARAL+FQ+ +P W ++ AVFLI
Sbjct: 692 SFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLI 751
Query: 709 NRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKP 768
NR PS +L K P++IL P L+ FG LC++ST R KF PR++ C+FLG+
Sbjct: 752 NRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPS 811
Query: 769 GTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQP---SDLNQHQSCPLPQASFLSDEPFE 825
G KGY + DL+SN + ISRNV FHE +FP P S L + +SD
Sbjct: 812 GYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGIISD---- 867
Query: 826 YATQSPSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSS 885
T SPS +Q + P +S R RK P++L DYHC+ + S
Sbjct: 868 -TTHSPSSLPSQISDLPPQI---------SSQRVRKPPAHLNDYHCNTMQS--------- 908
Query: 886 KGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALERNH 945
YP+S ISY ++P++ ++ NIT + P Y+EA W +A+D EI A+E+ +
Sbjct: 909 -DHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTN 967
Query: 946 TWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKM 1005
TW + P K +GCKWV+ +K+ DG L+RYKARLV KGYTQ EG+D+ DTFSPVAKM
Sbjct: 968 TWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKM 1027
Query: 1006 TTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEK-----PNQVCLLQ 1060
TT+++LL +++S WFL QLDV NAFL+ +L+EEI+M +P+G K N V L+
Sbjct: 1028 TTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLK 1087
Query: 1061 KSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGN 1120
+S+YGLKQASRQW+ +L +LGF + DHTL++K G F +L+YVDD+++
Sbjct: 1088 RSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKM-YDGEFVIVLVYVDDIVIAST 1146
Query: 1121 DLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGK 1180
+ E L +F+++D+G+ K+FLGLE+AR+ AGI + QRKYALELL +G+L K
Sbjct: 1147 SEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACK 1206
Query: 1181 PTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNV 1240
P + PM + K + DI YRR++GKL+YLT TRPDI + VN+L QF SAP
Sbjct: 1207 PVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTT 1266
Query: 1241 HEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLI 1300
H AA+RVL+YIKG G GLFY A S TL F+DSDWA C D+R+S T + MF+G SLI
Sbjct: 1267 HLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLI 1326
Query: 1301 SWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIA 1360
SWRSKKQ T SRSS EAEYRA+A CE+ WL LL LQA P P+ +Y D+ +A++IA
Sbjct: 1327 SWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIA 1385
Query: 1361 HNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLG 1420
NP +HERTKHI++DCH VRE++ G + LL + + Q+ADI TKPL P F H+ SK+
Sbjct: 1386 TNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMS 1445
Query: 1421 MYDIHS 1426
+ +I S
Sbjct: 1446 ILNIFS 1451
>At1g70010 hypothetical protein
Length = 1315
Score = 1062 bits (2747), Expect = 0.0
Identities = 584/1429 (40%), Positives = 848/1429 (58%), Gaps = 135/1429 (9%)
Query: 13 MKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISVEIAQSILWRDKA 72
M S+ KNKLGFVDG+I +P D P W+RCN +V SWL+ S+S EI SIL+ A
Sbjct: 1 MTTSIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTA 60
Query: 73 TDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWDELDILNPLPVCT 132
+W +L RF ++ L R+ +L+++I SL+QG+ +S ++T +TLW+EL L +P
Sbjct: 61 AAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVP--- 117
Query: 133 CNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPNVNRVFALIAQQE 192
++++ ER N+V+ FL GLND + VRSQ+++ LP+++ VF +I Q E
Sbjct: 118 -------RTVEDLLIERETNRVIDFLMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDE 170
Query: 193 RQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGNNRYSSKK---CS 249
Q S A I++ + S N++SQS G + Y K+ CS
Sbjct: 171 TQRS--------ARISTTPGMTSSVFPVS--NQSSQSALNG-------DTYQKKERPVCS 213
Query: 250 YCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQENASGQDAARF 309
YC + GH + CYKKHG+P FK K K+ + S + + G ++ V+ + S D
Sbjct: 214 YCSRPGHVEDTCYKKHGYPTSFKSKQ-KFVKPSISANAAIG-SEEVVNNTSVSTGD---- 267
Query: 310 GFTADQYHHLLAL----LPPSESKASSSQHTASVNSCAQVLPTKNGNGTSQVLPTRNGNP 365
T Q L++ L P + H+ SV+S
Sbjct: 268 -LTTSQIQQLVSFLSSKLQPPSTPVQPEVHSISVSS------------------------ 302
Query: 366 LDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFILANV 425
D ++ +C I G++ + IL +V
Sbjct: 303 -------DPSSSSTVC---------------------------PISGSVHLGRHLILNDV 328
Query: 426 LFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSIS 485
LF+P F+FNL+SV L K + R+ F++ C++QD+ M+G + V LYI + S+S
Sbjct: 329 LFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVDLDSLS 388
Query: 486 SLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQSINEL--FPYVQCSK 543
+ +SI+ + SV S H+LWH RLGHPS+ K Q ++ L FP + +
Sbjct: 389 HPGTDSSITVA---SVTS----------HDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNT 435
Query: 544 AHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDDYSRF 603
C VC ++KQK + F +S+ F LIH+D WGP S+ + G+ YFLTIVDDYSR
Sbjct: 436 DFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRA 495
Query: 604 TWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFYATKGIVHQTSCV 663
TW+YLL++ ++V ++ F +V NQFET +K +RSDN E + QFY +KGIV SC
Sbjct: 496 TWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCP 555
Query: 664 ETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVLDGKCPFQ 723
ETPQQNS+VERKHQHILNVAR+L FQ+H+P +W I+ AV+LINRLP+P+L+ KCPF+
Sbjct: 556 ETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFE 615
Query: 724 ILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSNDI 783
+L K +P ++KVFG LC+AST R KF PRAK C F+G+ G KGY + DL+++ I
Sbjct: 616 VLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSI 675
Query: 784 AISRNVVFHENMFPYPTQPSDLNQHQSCPLPQAS---FLSDEPFEYATQSPSEALTQPNT 840
+SR+VVFHE +FP+ SDL+Q + P + + + ++ S S + +
Sbjct: 676 IVSRHVVFHEELFPF--LGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVEILP 733
Query: 841 SEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCN 900
S ++ V + + +TS R K+P+YLQDY+C + S+ T + + K +SY
Sbjct: 734 SANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSS----------TPHEIRKFLSYDR 783
Query: 901 LAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIG 960
+ Y TF+ + EP Y+EA K WR AM E + LE HTW + P DK IG
Sbjct: 784 INDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIG 843
Query: 961 CKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNW 1020
C+W+++IKY DG+++RYKARLV +GYTQ EGID+ +TFSPVAK+ ++++LL +A+ +
Sbjct: 844 CRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKL 903
Query: 1021 FLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEK-----PNQVCLLQKSLYGLKQASRQWYT 1075
L QLD+ NAFL+ LDEEIYM LPQG + + PN VC L+KSLYGLKQASRQWY
Sbjct: 904 SLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYL 963
Query: 1076 TLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQ 1135
L LGF S DHT ++K + G F +L+Y+DD+++ N+ + ++K + +
Sbjct: 964 KFSSTLLGLGFIQSYCDHTCFLKI-SDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSF 1022
Query: 1136 FRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLS 1195
F+++D+GE K+FLGLEI RS GI ++QRKYAL+LL ++G LG KP++ PMD S F
Sbjct: 1023 FKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHD 1082
Query: 1196 TDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGN 1255
+ ++ YRRLIG+L+YL TRPDI + VN+L+QF AP H A +++L+YIKG
Sbjct: 1083 SGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGT 1142
Query: 1256 PGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSC 1315
G GLFY A S L ++++D+ C D+R+S +GYCMFLG SLI W+S+KQ S+SS
Sbjct: 1143 IGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSA 1202
Query: 1316 EAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVD 1375
EAEYR+++ E+ WL+ L +LQ P S P ++CDN++A+HIA+N +HERTKHIE D
Sbjct: 1203 EAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESD 1262
Query: 1376 CHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLGMYDI 1424
CH VRE++ +GL L I + Q+AD FTKPL P+ F + SK+G+ +I
Sbjct: 1263 CHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGLLNI 1311
>At4g17450 retrotransposon like protein
Length = 1433
Score = 998 bits (2580), Expect = 0.0
Identities = 560/1452 (38%), Positives = 817/1452 (55%), Gaps = 137/1452 (9%)
Query: 5 NYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISVEIAQ 64
NY+NW+ AM+MSL KNKL FVDG++ P + W RCN +V +WL+ +
Sbjct: 89 NYNNWSIAMRMSLDAKNKLSFVDGSLPRPDVSDRMFKIWSRCNSMVKTWLLNVV------ 142
Query: 65 SILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWDELDI 124
T++WN+L RF ++L R +L++ I +LKQG+ +S +YT KTLW++L
Sbjct: 143 --------TEMWNDLFSRFRVSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLAN 194
Query: 125 LNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPNVNRV 184
L V CN C +K + +E +++++FL GLND F+ +R Q++ + P + +
Sbjct: 195 TRVLTVRKCN----CEHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEI 250
Query: 185 FALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGNNRYS 244
+ ++ Q E S+ L+ + SN Q + S Q S Y
Sbjct: 251 YNMLDQDE----------SQRLVGNPTLSNPTAAFQVQASPIIDSQVNMAQGS-----YK 295
Query: 245 SKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQENASGQ 304
KCSYC K+GH V+ CYKKHG+PPG K+ + S NLA + + + E
Sbjct: 296 KPKCSYCNKLGHLVDKCYKKHGYPPGSKWTKGQTIG-STNLASTQLQPVNETPNEKTDSY 354
Query: 305 DAARFGFTADQYHHLLALLPPSESKASSSQ----HTASVNSCAQVLPTKNGNGT------ 354
+ F+ DQ +++ L AS+S +AS+++ V +GT
Sbjct: 355 EE----FSTDQIQTMISYLSTKLHIASASPMPTTSSASISASPSVPMISQISGTFLSLFS 410
Query: 355 ----SQVLPTRNGNPLDTT--WILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETT 408
++ + + P + W++D+GAT H+ + + +++ +E V LPN
Sbjct: 411 NAYYDMLISSVSQEPAVSPRGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKI 470
Query: 409 TIKGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIG 468
G IQ++ + L NVL++P F+FNLIS +L K L MIG
Sbjct: 471 AGIGFIQLSDAISLHNVLYIPEFKFNLIS--ELTKEL--------------------MIG 508
Query: 469 TVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVK 528
V LY+ + + + S +TS+ P S+C+ WH RLGHP+ K
Sbjct: 509 RGSQVGNLYVLDFNENNHTVSLKG-TTSMCPEF---SVCSSVVVDSVTWHKRLGHPAYSK 564
Query: 529 GQSINELFPYV-------QCSKAHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGP 581
++++ HVC VC ++KQK +SF +A F L+H+D WGP
Sbjct: 565 IDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHIDTWGP 624
Query: 582 VSIVSLHGFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDN 641
S+ + + TWIYLLK+ ++V ++ F +V Q++T +K++RSDN
Sbjct: 625 FSVPT--------------NDATWIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDN 670
Query: 642 GKEFSLPQFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAI 701
E +A GIV SC ETP+QNS+VERKHQHILNVARALLFQ+++P FW +
Sbjct: 671 AHELKFTDLFAAHGIVAYHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCV 730
Query: 702 VHAVFLINRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRC 761
+ AVFLINRLP+PVL+ K P++ L + P +LK FG LC++ST R KF+PRA+ C
Sbjct: 731 LTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARAC 790
Query: 762 VFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQASFLSD 821
VFLG+ G KGY + D++++ ++ISR+V+FHE++FP+ + + PL Q +D
Sbjct: 791 VFLGYPLGYKGYKLLDIETHAVSISRHVIFHEDIFPFISSTIKDDIKDFFPLLQFPARTD 850
Query: 822 EPFEYATQSPSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSS 881
+ + S T P+ + SS L S R +K P +LQD+HC
Sbjct: 851 D---LPLEQTSIIDTHPH-QDVSSSKALVPFDPLSKRQKKPPKHLQDFHC---------- 896
Query: 882 SSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEAL 941
Y N +H F+ NIT V P+RYSEA +W AM +EI A+
Sbjct: 897 ----------------YNNTTEPFHAFINNITNAVIPQRYSEAKDFKAWCDAMKEEIGAM 940
Query: 942 ERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSP 1001
R +TW +V P +K IGCKWV+ IK+ DG+++RYKARLV KGYTQ EG+D+ +TFSP
Sbjct: 941 VRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSP 1000
Query: 1002 VAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGL-----HTEKPNQV 1056
VAK+T++R++L LA+ W +HQLD+ NAFL+ LDEEIYM +P G P+ +
Sbjct: 1001 VAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAI 1060
Query: 1057 CLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVL 1116
C L KS+YGLKQASRQWY L L +GF S+ADHTL+IK G +L+YVDD++
Sbjct: 1061 CRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYAN-GVLMGVLVYVDDIM 1119
Query: 1117 LTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGL 1176
+ N + L + F+++D+G AK+FLG+EIARS+ GI + QRKY LELLS +G
Sbjct: 1120 IVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTGF 1179
Query: 1177 LGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSA 1236
LG KP++ P+D S K PL+D +SYR+L+GKL+YL TRPDIAY VN L QF A
Sbjct: 1180 LGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHA 1239
Query: 1237 PTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLG 1296
PT+VH +A H+VLRY+KG G GLFY AD L ++DSD+ C D+R+ + YCMF+G
Sbjct: 1240 PTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIG 1299
Query: 1297 SSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSA 1356
L+SW+SKKQ T S S+ EAE+RAM+ E+ WLS L D + P P +YCDN +A
Sbjct: 1300 DYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAA 1359
Query: 1357 MHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIF 1416
+HI +N +HERTK +E+DC+ RE V+ G + + + + Q+AD TK + PA F +
Sbjct: 1360 LHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLI 1419
Query: 1417 SKLGMYDIHSPV 1428
K+G+ +I +P+
Sbjct: 1420 GKMGVCNIFAPL 1431
>At1g26990 polyprotein, putative
Length = 1436
Score = 976 bits (2522), Expect = 0.0
Identities = 560/1467 (38%), Positives = 821/1467 (55%), Gaps = 151/1467 (10%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISV 60
L NY++W+ AM++SL KNKLGFVDG++ P D W RCN +V
Sbjct: 75 LDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFRIWSRCNSMV---------- 124
Query: 61 EIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWD 120
N L R+ +L++ + +L+QG +S ++T KTLW+
Sbjct: 125 ----------------NNLPRRY---------QLEQAVMTLQQGKLDLSTYFTKKKTLWE 159
Query: 121 ELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPN 180
+L V +C C +K + +E ++V++FL GL+D F+ +RSQ+ + P
Sbjct: 160 QLANTKSRSV----KKCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPG 215
Query: 181 VNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGN 240
+N ++ ++ Q E S+ L+ S + + + ++ + GN
Sbjct: 216 LNEIYNMLDQDE----------SQRLVGFAAKSVPSPSPAAFQTQGVLNDQNTILLAQGN 265
Query: 241 NRYSSKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQEN 300
+ KC++C ++GHTV+ CYK HG+PPG S NLA + + + +
Sbjct: 266 --FKKPKCTHCNRIGHTVDKCYKVHGYPPGHPRAKENTYVGSTNLASTDQIETQAPPTMS 323
Query: 301 ASGQDAARFGFTADQYHHLLALLP-----PS------ESKASSSQHTASVNSCAQVLPTK 349
A+G + + D L++ L PS ++ ASSS S++
Sbjct: 324 ATGHET----MSNDHIQQLISYLSTKLQSPSITSCFDKAIASSSNPVPSISQITDKAIAS 379
Query: 350 NGN---GTSQVLPT-------------RNGNPLDT-----TWILDTGATDHICNTLSYFS 388
+ N SQ+ T + P++T W++D+GA+ H+ + + +
Sbjct: 380 SSNPVPSISQITGTFFSLYDSTYYEMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYH 439
Query: 389 SYKHVEPIPVSLPNGIVETTTIKGT--IQITPSFILANVLFLPNFEFNLISVHKLVKCLR 446
+YK ++ V LPNG T I+GT IQ+T + L NVLF+P F+FNL+SV L K L+
Sbjct: 440 TYKALDRTFVRLPNG--HTVKIEGTGFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQ 497
Query: 447 YRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSI 506
++ F D C+IQ M+G V LYI N SL +S S+
Sbjct: 498 SKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDK--SLVDVSSFP--------GKSV 547
Query: 507 CTFQSNVHNLWHYRLGHPSLVKGQSINE--LFPYVQCSK-AHVCDVCPVAKQKRMSFPLS 563
C+ N +WH RLGHPS K ++++ + P + +K + C VC ++KQK + F
Sbjct: 548 CSSVKNESEMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSV 607
Query: 564 VTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFC 623
F+L+H+D WGP S+ ++ + YFLTIVDD+SR TWIYLLK ++V + F
Sbjct: 608 NHIREKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFL 667
Query: 624 ALVANQFETAVKTIRSDNGKEFSLPQFYATKGIVHQTSCVETPQQNSIVERKHQHILNVA 683
+V Q+ T V ++RSDN E + +A +GI C ETP+QN +VERKHQH+LNVA
Sbjct: 668 KMVETQYHTKVCSVRSDNAHELKFNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNVA 727
Query: 684 RALLFQAHLPKIFWAHAIVHAVFLINRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCF 743
RAL+FQ+ +P +W ++ AVFLINRL SPV++ + P++ L K PD ++LK FG LC+
Sbjct: 728 RALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCY 787
Query: 744 ASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQ-- 801
ST RTKFDPRAK C+FLG+ G KGY + D+++ ++ISR+V+F+E++FP+ +
Sbjct: 788 CSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFPFASSNI 847
Query: 802 ---PSDLNQHQSCPLPQASFLSDEPFEYATQSPSEALTQPNTSEPSSDPVLDNNHRTSTR 858
D H P P +DE QS S+A P+ + SS + + STR
Sbjct: 848 TDAAKDFFPHIYLPAPN----NDEHLP-LVQSSSDA---PHNHDESSSMIFVPSEPKSTR 899
Query: 859 TRKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEP 918
RK PS+LQD+HC ++ +++K + YPL+ ISY L+ + F+ ITA P
Sbjct: 900 QRKLPSHLQDFHC------YNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITATKLP 953
Query: 919 KRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRY 978
++YSEA W AM +EI A R TW + D P K +GCKW+ IK+ DG+++R+
Sbjct: 954 QKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSIERH 1013
Query: 979 KARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDE 1038
KARLV KGYTQ EGIDF +TFSPVAKM T++VLL+LA W+LHQLD+ NA L+ L+E
Sbjct: 1014 KARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGDLEE 1073
Query: 1039 EIYMSLPQGLHTEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIK 1098
EIYM LP G ++E Q +G DHTL++
Sbjct: 1074 EIYMKLPPG-YSEIQGQEVSPNAKCHG--------------------------DHTLFV- 1105
Query: 1099 KGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAG 1158
K G F +L+YVDD+L+ + L + F+++D+GE KFFLG+EIAR+ G
Sbjct: 1106 KAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIARNADG 1165
Query: 1159 IVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTT 1218
I L QRKY L+LL+ S KP++ PM+ +QK T T L D YRR++GKL YL
Sbjct: 1166 ISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLCL 1225
Query: 1219 TRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDW 1278
TRPDI + V++L+Q+ SAPT++H A H++LRY+KG G GLFY AD++ L FSDSDW
Sbjct: 1226 TRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDW 1285
Query: 1279 AGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHD 1338
C DTR+ +TG+ +F+G+SL+SWRSKKQ S SS EAEYRAM+ E+ WL Y+L
Sbjct: 1286 QTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTA 1345
Query: 1339 LQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQ 1398
+ P + P +YCDN++A+HIA+N +HERTKHIE DCH VRE ++ G++ + + + +Q
Sbjct: 1346 FKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQ 1405
Query: 1399 LADIFTKPLTPAPFRHIFSKLGMYDIH 1425
LAD TKPL P PFR SKLG+ +I+
Sbjct: 1406 LADTLTKPLYPKPFRENNSKLGLLNIY 1432
>At4g14460 retrovirus-related like polyprotein
Length = 1489
Score = 961 bits (2484), Expect = 0.0
Identities = 568/1524 (37%), Positives = 824/1524 (53%), Gaps = 197/1524 (12%)
Query: 5 NYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISVEIAQ 64
++H+W R++ M+L +NKLGF++GTI +PP+DH W RCN +V +WL+ S+ +I Q
Sbjct: 56 DFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQ 115
Query: 65 SILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWDELDI 124
S+L+ +WN L RF Q D RI ++++++ ++QG +S +YT++ TLW+E
Sbjct: 116 SLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRN 175
Query: 125 LNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPNVNRV 184
LPVCTC RC C A E + +++V +FL+ LN+ F R +++L +P +
Sbjct: 176 YVELPVCTCG-RCECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEA 234
Query: 185 FALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGNNRYS 244
F ++ Q ERQ + + ++ + +A + S N ++ Y ++ N+
Sbjct: 235 FNMVTQDERQRNVKPLTRVDS-VAFQNTSMIN---------EDENAYVAAYNTVRPNQ-- 282
Query: 245 SKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQENASGQ 304
C++CGK+GHT++ CYK HG+PPG K N Y + H Q
Sbjct: 283 KPICTHCGKVGHTIQKCYKVHGYPPGMKTGNTGYTYKPNPQLHV---------QPRMPMM 333
Query: 305 DAARFGFTADQY-HHLLALLPPSESKASSSQHTASVNSCAQVLPTKNGNGTSQVLP--TR 361
R F A Y + + ++ A + + + S A P N G S +P T
Sbjct: 334 PQPRMQFPAQPYTNSMQKANVVAQVYAETGAYPSEGYSQA---PMMNPYG-SYPMPHITH 389
Query: 362 NGNPLDTTWILDTGATDHICNTLSYF----------SSYKHVEPIPVSLPNGIVETTTIK 411
GN L L I +S F +S + P+ +G + T+
Sbjct: 390 GGNNLS----LQDFTPQQIEQMISQFQAQVQVPEPAASSSNPSPLATVSEHGFMALTSTS 445
Query: 412 GTIQITPSFIL---------------ANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLC 456
GTI PS L A FLP+ + + S C DL
Sbjct: 446 GTIIPFPSTSLKYENNDLKFQNHTLSALQKFLPSDAWIIDSGASSHVC--------SDLA 497
Query: 457 LIQDSNACKMIGTVRAVKGLYIFNKSSIS----SLASCNSISTSVNPSVHSSSICTFQSN 512
+ ++ + + GTV + L + N + +L S +S+ +++ S H C
Sbjct: 498 MFRELKS--VSGTVHITQKLILHNVLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQE 555
Query: 513 V------------HNLWHYRLGHPS---------LVKGQSINELFPYVQCSKAHVCDVCP 551
+ HNL+ + S L G +N+ + Q H V
Sbjct: 556 LSQGLMIGRGRLYHNLYILETENTSPSTSTPAACLFTGSVLNDGHLWHQ-RLGHPSSVV- 613
Query: 552 VAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDDYSRFTWIYLLKS 611
+ K KR+++ ++ F L+H+DIWGP SI S+ GF YFLT+VDD +R TW+Y+L++
Sbjct: 614 LQKLKRLAYISHNNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRN 673
Query: 612 *AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFYATKGIVHQTSCVETPQQNSI 671
+V ++ EF LV+ QF +K IRSDN E + G++H SC TPQQNS+
Sbjct: 674 KKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSCAYTPQQNSV 733
Query: 672 VERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVLDGKCPFQILHKVLPD 731
VERKHQHILNVARALLFQ+++P +W+ + AVFLINRLPSP+L+ K P++++ PD
Sbjct: 734 VERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPD 793
Query: 732 LTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVF 791
+ LK FG LCF ST RTKF PRA+ CVFLG+ G KGY V DL+S+ + +SRNVVF
Sbjct: 794 YSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVF 853
Query: 792 HENMFPYPT-----QPSDLNQHQSCPLP------QASFLSDEPFEYATQSPSEALTQPNT 840
E++FP+ T + D+ + PLP + L DE T + S +
Sbjct: 854 KEHVFPFKTSELLNKAVDMFPNSILPLPAPLHFVETMPLIDEDSLIPTTTDSRTADNHAS 913
Query: 841 SEPSSDPVL---DNNHRT------------STRTRKQPSYLQDYHCSLIASTAV------ 879
S S+ P + +N T S RT + PSYL +YHCSL+ S +
Sbjct: 914 SSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHCSLVPSISTLPPTDS 973
Query: 880 -----------SSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHD 928
++SS K T YP+S V+SY P +++ EPK +S+A+K +
Sbjct: 974 SIPIHPLPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAYNTETEPKTFSQAMKSE 1033
Query: 929 SWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYT 988
W + +E++A+E N TW + P DK +GCKWV+ IKY DGT++RYKARLV +G+T
Sbjct: 1034 KWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGTVERYKARLVAQGFT 1093
Query: 989 QLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGL 1048
Q EGIDF+DTFSPVAK+T+ +++L LA+ W L Q+DV +AFLH LDEEI+MSLPQG
Sbjct: 1094 QQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFLHGDLDEEIFMSLPQGY 1153
Query: 1049 HTE-----KPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTG 1103
PN VC L KS+YGLKQASRQWY
Sbjct: 1154 TPPAGTILPPNPVCRLLKSIYGLKQASRQWYK---------------------------- 1185
Query: 1104 SFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQ 1163
F A L+Y+DD+++ N+ E++ +K L ++F+IKD+G A+FFL
Sbjct: 1186 RFVAALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFL--------------- 1230
Query: 1164 RKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDI 1223
GLLG KP++ PMD + TPL + ++YR+LIG+LLYLT TRPDI
Sbjct: 1231 -----------GLLGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRKLIGRLLYLTITRPDI 1279
Query: 1224 AYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLD 1283
Y V+QLSQF+SAP+++H AAH+VLRYIK NPG GL Y AD L FSD+DWA C D
Sbjct: 1280 TYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICLNGFSDADWAACKD 1339
Query: 1284 TRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPP 1343
TR+SI+G+C++LG+SLISW+SKKQ SRSS E+EYR+MA CE+ WL LL DL P
Sbjct: 1340 TRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQLLKDLHIPL 1399
Query: 1344 SAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIF 1403
+ P ++CDN+SA+H + NP +HERTKHIE+DCH VR++++ G + L + + +Q ADI
Sbjct: 1400 TCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKALHVPTENQHADIL 1459
Query: 1404 TKPLTPAPFRHIFSKLGMYDIHSP 1427
TK L P PF H+ ++ + + P
Sbjct: 1460 TKALHPGPFHHLLRQMSLSSLFLP 1483
>At2g23330 putative retroelement pol polyprotein
Length = 1496
Score = 948 bits (2451), Expect = 0.0
Identities = 563/1524 (36%), Positives = 817/1524 (52%), Gaps = 172/1524 (11%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISV 60
L E NY W+ ++ L K KLGF+DG+I +P D P L W N +++ W+ SI
Sbjct: 39 LKENNYAEWSEELQNFLRAKQKLGFIDGSIPKPAAD-PELSLWIAINSMIVGWIRTSIDP 97
Query: 61 EIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWD 120
I ++ + +A+ +W LR RF+ + R + L++EI + Q V +Y + LW+
Sbjct: 98 TIRSTVGFVSEASQLWENLRRRFSVGNGVRKTLLKDEIAACTQDGQPVLAYYGRLIKLWE 157
Query: 121 ELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPN 180
EL C C A +IE ER ++V +FL GL+ +FS +RS + ++ LP+
Sbjct: 158 ELQNYKS------GRECKCEAASDIEKEREDDRVHKFLLGLDSRFSSIRSSITDIEPLPD 211
Query: 181 VNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGN 240
+ +V++ + ++E+ N S ++ ++ + + S + R+ + +
Sbjct: 212 LYQVYSRVVREEQNL---NASRTKDVVKTEAIGFSVQSSTTPRFRDKSTLF--------- 259
Query: 241 NRYSSKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQEN 300
C++C + GH V C+ HG+P + +NP+ Q S S G
Sbjct: 260 -------CTHCNRKGHEVTQCFLVHGYPDWWLEQNPQENQPSTRGRGSNGR--------- 303
Query: 301 ASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPTKNGNGTSQVLPT 360
G + R G + S A +++ N+ PT +G+G Q+
Sbjct: 304 --GSSSGRGG---------------NRSSAPTTRGRGRANNAQAAAPTVSGDGNDQIAQL 346
Query: 361 ---------------RNGNPLDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIV 405
+GN T ++DTGA+ H+ S + P PV+ P+G
Sbjct: 347 ISLLQAQRPSSSSERLSGNTCLTDGVIDTGASHHMTGDCSILVDVFDITPSPVTKPDGKA 406
Query: 406 ETTTIKGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACK 465
T GT+ + S+ L +VLF+P+F+ LISV KL+K IF D C +QD
Sbjct: 407 SQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRT 466
Query: 466 MIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPS 525
+IG +G+Y F + + P VH +S S +LWH RLGHPS
Sbjct: 467 LIGAGEEREGVYYF--------------TGVLAPRVHKASSDFAISG--DLWHRRLGHPS 510
Query: 526 LVKGQSINELFPYVQ-CSKAHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSI 584
S+ E Q K CD C +KQ R FP+S ++ F LIH D+WGP
Sbjct: 511 TSVLLSLPECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRT 570
Query: 585 VSLHGFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKE 644
S G YFLT+VDDYSR W YL+ S EV L++ FCA+ QF VK R+DNG E
Sbjct: 571 PSTTGAVYFLTLVDDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTE 630
Query: 645 FS-LPQFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVH 703
F L ++ T GI+HQTSCV+TPQQN VERKH+HILNVARA LFQ +LP FW +I+
Sbjct: 631 FMCLTPYFQTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILT 690
Query: 704 AVFLINRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVF 763
A LINR PS VL GK P+++L P L+ FG LC+A ++ KF R+++CVF
Sbjct: 691 ATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVF 750
Query: 764 LGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPY-----------PTQPSDLNQHQSCP 812
+G+ G K + VYDL++ I SR+V FHE+++PY P P +N P
Sbjct: 751 IGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMVNDDWFLP 810
Query: 813 L----------------PQASFLSDEPFEYATQSPSEALTQPNTSE-----PSSDPVLDN 851
+ P S D+P QSPS + T P E PSS P
Sbjct: 811 ISTQVDSTNVDSSSSSSPAQSGSIDQPPRSIDQSPSTS-TNPVPEEIGSIVPSSSPSRSI 869
Query: 852 NHRTST-------------------------------RTRKQPSYLQDYHCSLIAS---- 876
+ TS R +K+ L+D+ + +
Sbjct: 870 DRSTSDLSASDTTELLSTGESSTPSSPGLPELLGKGCREKKKSVLLKDFVTNTTSKKKTA 929
Query: 877 ----------------TAVSSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKR 920
T++S+ S S T YPLS ++ + + F+ I EPK
Sbjct: 930 SHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSANHIAFMAAILDSNEPKH 989
Query: 921 YSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKA 980
+ +A+ W +AM +EI+ALE NHTW + D PH K I KWVY++KY DGTL+R+KA
Sbjct: 990 FKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKA 1049
Query: 981 RLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEI 1040
RLVV G Q EG+DF +TF+PVAK+TT+R +LA+A++ +W +HQ+DV NAFLH L+EE+
Sbjct: 1050 RLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEV 1109
Query: 1041 YMSLPQGLHTEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLY-IKK 1099
YM LP G P++VC L+KSLYGLKQA R W++ L AL +GF+ S D++L+ +K
Sbjct: 1110 YMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKN 1169
Query: 1100 GTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGI 1159
G T +L+YVDD+++ GN+L I K LH F +KD+G+ K+FLGLE++R G
Sbjct: 1170 GDT--IIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGF 1227
Query: 1160 VLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTT 1219
L+QRKYAL+++ ++GLLG KP+ P+ + K T ++ YRRL+G+ +YLT T
Sbjct: 1228 CLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTIT 1287
Query: 1220 RPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWA 1279
RPD++Y V+ LSQF+ AP H AA R++RY+KG+P G+F +DSS + A+ DSD+
Sbjct: 1288 RPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYN 1347
Query: 1280 GCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDL 1339
C TR+S++ Y ++LG S ISW++KKQ T S SS EAEYRAMA T+ E++WL LL DL
Sbjct: 1348 ACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDL 1407
Query: 1340 QAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQL 1399
S+P+ ++CD+++A+HIA NP +HERTKHIE DCH VR+ V L+ I + Q+
Sbjct: 1408 GVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQV 1467
Query: 1400 ADIFTKPLTPAPFRHIFSKLGMYD 1423
AD+ TK L F + S LG+ D
Sbjct: 1468 ADLLTKSLPRPTFERLLSTLGVTD 1491
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 775 bits (2000), Expect = 0.0
Identities = 487/1361 (35%), Positives = 725/1361 (52%), Gaps = 134/1361 (9%)
Query: 114 SMKT--LWDELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQ-FSGVRS 170
SMKT LW P+ +C C C C E +R +++V FL GL+D F VRS
Sbjct: 59 SMKTALLWLAF---KPVRICKCGG-CVCDLGALQEKDREEDKVHEFLSGLDDALFRTVRS 114
Query: 171 QLMLLDNLPNVNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSN 230
L+ + + V+ ++ Q+E L+ + N D+ Q + N +
Sbjct: 115 SLVSRIPVQPLEEVYNIVRQEED------------LLRNGANVLDD---QREVNAFAAQM 159
Query: 231 YGGCQSSSGNNRYSSKKCSYCGKMGHTVEDCYKKHGFPP--GFKFKNPKYAQRSANLAHS 288
G+ + S C +C + GH E CY G+P G + ++ R +S
Sbjct: 160 RPKLYQGRGDEKDKSMVCKHCNRSGHASESCYAVIGYPEWWGDRPRSRSLQTRGRGGTNS 219
Query: 289 TGEDQDSVDQENASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPT 348
+G G+ AA + +H + L
Sbjct: 220 SG----------GRGRGAAAYANRVTVPNH------------------DTYEQANYALTD 251
Query: 349 KNGNGTSQVLPTRNGNPLDTTW-----ILDTG---ATDHICNTLSYFSSYKHVEPIPVSL 400
++ +G + + D+ W IL++G AT+ + + ++PI + L
Sbjct: 252 EDRDGVNGLT--------DSQWRTIKSILNSGKDAATEKLTD----------MDPILIVL 293
Query: 401 PNGIVETTTIKGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQD 460
+G + +GT+++ + ++ +V ++ F+ +LIS+ +L+ R L D ++QD
Sbjct: 294 ADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSDRFLVVQD 353
Query: 461 SNACKMIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYR 520
+ ++G R V G + F + I++ S+ + + LWH R
Sbjct: 354 RTSRMVMGAGRRVGGTFHFRSTEIAA------------------SVTVKEEKNYELWHSR 395
Query: 521 LGHPSLVKGQSINELFPYVQCSKAHV---CDVCPVAKQKRMSFPLSVTQSTAIFQLIHVD 577
+GHP+ I E V S H+ CDVC AKQ R SFPLS+ ++ IF+LI+ D
Sbjct: 396 MGHPAARVVSLIPE--SSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCD 453
Query: 578 IWGPVSIVSLHGFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTI 637
+WGP S G YFLTI+DDYSR W+YLL +E ++ F A+ QF +KT+
Sbjct: 454 LWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTV 513
Query: 638 RSDNGKEF-SLPQFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIF 696
RSDNG EF L +F+ +G++H+ SCV TP++N VERKH+H+LNVARAL FQA+LP F
Sbjct: 514 RSDNGTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQF 573
Query: 697 WAHAIVHAVFLINRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDP 756
W ++ A +LINR PS VL+ P++ LHK P +L+VFGSLC+A KF
Sbjct: 574 WGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAE 633
Query: 757 RAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDL---NQHQSCPL 813
R++RCVF+G+ G KG+ ++DL+ N+ +SR+VVF E FP+ + ++
Sbjct: 634 RSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRISHEQNVIEEEEEALWA 693
Query: 814 PQASFLSDEPFEYA----------TQSPSEALTQPNTSEPSSDPVLDNN----HRTSTRT 859
P L +E SP + SE S+ LD TST +
Sbjct: 694 PIVDGLIEEEVHLGQNAGPTPPICVSSPISPSATSSRSEHSTSSPLDTEVVPTPATSTTS 753
Query: 860 RKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCNLAP--AYHTFVMNITAVVE 917
PS + ++ +++ + + P + S N AP FV+N T E
Sbjct: 754 ASSPSSPTNLQFLPLSRAKPTTAQAVAPPAVPPPRRQSTRNKAPPVTLKDFVVNTTVCQE 813
Query: 918 -PKRYSEAV----KHDSWRKAMDQE-----IEALERNHTWILVDKPHDKTPIGCKWVYRI 967
P + + + K D R+ I+A E NHTW + D P K IG +WVY++
Sbjct: 814 SPSKLNSILYQLQKRDDTRRFSASHTTYVAIDAQEENHTWTIEDLPPGKRAIGSQWVYKV 873
Query: 968 KYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDV 1027
K+ DG+++RYKARLV G Q EG D+ +TF+PVAKM T+R+ L +A NW +HQ+DV
Sbjct: 874 KHNSDGSVERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDV 933
Query: 1028 DNAFLHAQLDEEIYMSLPQGLHTEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFS 1087
NAFLH L EE+YM LP G PN+VC L+K+LYGLKQA R W+ L AL GF
Sbjct: 934 HNAFLHGDLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQ 993
Query: 1088 PSSADHTLY-IKKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKF 1146
S AD++L+ + KG+ +L+YVDD+++TGN Q KE L + F +KD+G K+
Sbjct: 994 QSLADYSLFTLVKGSVR--IKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKY 1051
Query: 1147 FLGLEIARSKAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSY 1206
FLG+E+ARS GI + QRKYAL+++S++GLLG KP P++ + K GLST L+D Y
Sbjct: 1052 FLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRY 1111
Query: 1207 RRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADS 1266
RRL+G+L+YL TR D+A+ V+ L++F+ P H AAA RV+RY+K +PG G+F
Sbjct: 1112 RRLVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSG 1171
Query: 1267 STTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATV 1326
+T + DSDWAG +R+S+TGY + G S ISW++KKQ T S+SS EAEYRAM+
Sbjct: 1172 DFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLA 1231
Query: 1327 CEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQG 1386
E+ WL LL L P+ M CD++SA++IA NP +HERTKHIE+D H VR++ +G
Sbjct: 1232 SELLWLKQLLFSLGVSHVQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKG 1291
Query: 1387 LVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLGMYDIHSP 1427
++ + ++ QLADIFTKPL F KLG+ ++++P
Sbjct: 1292 VITPRHVGTTSQLADIFTKPLGRDCFSAFRIKLGIRNLYAP 1332
>At4g07810 putative polyprotein
Length = 1366
Score = 740 bits (1910), Expect = 0.0
Identities = 488/1419 (34%), Positives = 709/1419 (49%), Gaps = 199/1419 (14%)
Query: 75 VWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTL--------WDELDILN 126
+W +L R Q++L +I +Q ++ L QG +S +YT + W+EL
Sbjct: 80 LWLKLEGRSRQSNLSKIYSVQNQLDRLHQGSLDLSAYYTRLTVTFIRSQCLSWEELKNFE 139
Query: 127 PLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVRSQLMLLDNLPNVNRVFA 186
LP CTC +C CG+ K+ +VRFL LN+ F R Q++++D LP ++
Sbjct: 140 ELPSCTCG-KCTCGSNDRWIQLYEKHNIVRFLMRLNESFIQARRQILMMDPLPEFTNLYN 198
Query: 187 LIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQSSSGNNRYSSK 246
I+Q ++Q SF ++ + + + Q N Q S
Sbjct: 199 FISQDDQQRSFNSMPTTEKPVFQASITQ-----QKPKFFNQQGK-------------SRP 240
Query: 247 KCSYCGKMGHTVEDCYKKHGFPPGF-----------KFKNPKYAQRSANLAHS---TGED 292
C+YCG +GHT CYK HG+PPG+ K + Y +++H G
Sbjct: 241 LCTYCGLLGHTNARCYKLHGYPPGYKVPVGTCYNNDKSRGQPYPHNGIHMSHLITYNGNS 300
Query: 293 QDSVDQENASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPTKNGN 352
+ Q N + A + Y+ S A +Q+ A + + GN
Sbjct: 301 YAPIVQANNN----APYALYNQAYN--------GNSYAPMAQNFAGNHIISDGSSMSAGN 348
Query: 353 GTSQVLPTRNGNPLDTTWILDTGATDH----------ICNTLSYFSSYKHVEPIPVSLPN 402
TS+ + + + G++ H NT S Y+ + P VS +
Sbjct: 349 VTSESPTVNHSVNMMNSGRGFLGSSSHGREQVNQMVTQLNTQLQGSPYQVIRPPTVSQNH 408
Query: 403 GIVETTTIKGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSN 462
G + +G I +I A FE CL I + +
Sbjct: 409 GSISA---QGMSPIPSHYISA-------FE----------PCL----IIPQNTWSLDTRA 444
Query: 463 ACKMIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSS-----ICTFQSNVHNLW 517
+C + + +Y + ++I+ L + IS ++ +V + + + + H
Sbjct: 445 SCHICCDLSLFCNVYHIDHTNIT-LPNNIKISINIAETVKLNDRLILHLVFYVPSFHFNL 503
Query: 518 HYRLGHPSLVKGQSINELFPYVQCSKAHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVD 577
RLGHPS+ + Q+++ Q C +C ++KQK +SF + F LIH+D
Sbjct: 504 ISRLGHPSMSRVQALSSNLHIPQKLSEFHCKICHLSKQKCLSFVSNNKIYEEPFPLIHID 563
Query: 578 IWGPVSIVSLHGFSYFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTI 637
++V + EF LV QF VK+I
Sbjct: 564 -----------------------------------SDVTTIFPEFLKLVQTQFGCTVKSI 588
Query: 638 RSDNGKEFSLPQFYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFW 697
RSDN E AT GI H SC TPQQN +VER HQH+LNVAR+L FQ+++P +W
Sbjct: 589 RSDNAPELQFKDLLATFGIFHYHSCAYTPQQNYVVERNHQHLLNVARSLYFQSNIPLAYW 648
Query: 698 AHAIVHAVFLINRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPR 757
+ A FLINR P+P L+ K P+++L+K LPD +L+VF LC+AST R KF R
Sbjct: 649 PECVSTAAFLINRTPTPNLEHKSPYEVLYKKLPDYNSLRVFCCLCYASTHQHERHKFTER 708
Query: 758 AKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQH--QSCPLPQ 815
A CVF+G++ G KGY + DL+SN ++++RNVVFHE +FP+ + S N LP
Sbjct: 709 ATSCVFIGYESGFKGYKILDLESNTVSVTRNVVFHETIFPFIDKHSTQNVSFFDDSVLPI 768
Query: 816 ASFLSDEPFEY----------------ATQSPSEALTQ---PNTSEPSSDPV---LDNNH 853
+ + F+ T P+ T+ P ++ ++D +DN
Sbjct: 769 SEKQKENRFQIYDYFNVLNLEVCPVIEPTTVPAHTHTRSLAPLSTTVTNDQFGNDMDNTL 828
Query: 854 RTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNIT 913
TR PSYL YHCS + SSS GT++ LS +SY L+ Y F I
Sbjct: 829 MPRKETRA-PSYLSQYHCSNVLK---EPSSSLHGTAHSLSSHLSYDKLSNEYRLFCFAII 884
Query: 914 AVVEPKRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDG 973
A EP + EA W AM+ E++AL T + K IGCKWV++IKYK DG
Sbjct: 885 AEKEPTTFKEAALLQKWLDAMNVELDALVSTSTREICSLHDGKRAIGCKWVFKIKYKSDG 944
Query: 974 TLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLH 1033
T++RYKARLV GYTQ EG+D+IDTFSP+AK+T++R++LALA+ +NW + Q+DV NAFLH
Sbjct: 945 TIERYKARLVANGYTQQEGVDYIDTFSPIAKLTSVRLILALAAIHNWSISQMDVTNAFLH 1004
Query: 1034 AQLDEEIYMSLPQGLHTEK-----PNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSP 1088
+EEIYM LPQG K VC L KSLYGLKQASRQW+ L GF
Sbjct: 1005 GDFEEEIYMQLPQGYTPRKGELLPKRPVCRLVKSLYGLKQASRQWFHKFSGVLIQNGFMQ 1064
Query: 1089 SSADHTLYIKKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFL 1148
S D TL+++ +F ALL+YVDD++L N + VK+ L +F++KD+G+ ++FL
Sbjct: 1065 SLFDPTLFVRV-REDTFLALLVYVDDIMLVSNKDSAVIEVKQILAKEFKLKDLGQKRYFL 1123
Query: 1149 GLEIARSKAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRR 1208
GLEIARSK GI ++QRKYALELL + G LG KP TPM+ + K L D S YR+
Sbjct: 1124 GLEIARSKEGISISQRKYALELLEEFGFLGCKPVPTPMELNLKLSQEDGALLLDASHYRK 1183
Query: 1209 LIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSST 1268
LIG+L+YLT TRPDI + VN+L+Q++SAP H AA R+LRY+K +PG G+FYPA S+
Sbjct: 1184 LIGRLVYLTVTRPDICFAVNKLNQYMSAPREPHLMAARRILRYLKNDPGQGVFYPASSTL 1243
Query: 1269 TLTAFSDSDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCE 1328
T AF+D+DW+ C ++ SI S++ W + S EA
Sbjct: 1244 TFRAFADADWSNCPESSISI---------SIVFW--------LKLSTEA----------- 1275
Query: 1329 VQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLV 1388
WL L D + +Y D++SA+HIA N +HE TK+ D H+VREKV G +
Sbjct: 1276 --WLVLSLPD-------TIFVYYDDESALHIAKNSVFHESTKNFLHDIHVVREKVAVGFI 1326
Query: 1389 HLLPIASSHQLADIFTKPLTPAPFRHIFSKLGMYDIHSP 1427
L + + H + D+ TKPLT F ++ SK+G++ ++SP
Sbjct: 1327 KTLHVDTEHNIVDLLTKPLTALRFNYLLSKMGLHHLYSP 1365
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 656 bits (1693), Expect = 0.0
Identities = 395/1087 (36%), Positives = 586/1087 (53%), Gaps = 70/1087 (6%)
Query: 370 WILDTGATDHIC---NTLSYFSSYKHVEPIPVS----LPNGIVETTTIKGTIQITPSFIL 422
W D+ AT H+ N L + Y+ + + V LP +TTIK + P L
Sbjct: 322 WHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIP---L 378
Query: 423 ANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKS 482
VL +PN + +L+SV KL + F+ + I D K++ T GLY+
Sbjct: 379 NEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQ 438
Query: 483 SISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQSINELFPYVQCS 542
+L +S+ C V WH+RLGH + Q + +Q +
Sbjct: 439 EFVAL--------------YSNRQCAATEEV---WHHRLGHANSKALQHLQNS-KAIQIN 480
Query: 543 KAH---VCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDD 599
K+ VC+ C + K R+ F +S ++ IH D+WGP +VS G Y+ VDD
Sbjct: 481 KSRTSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDD 540
Query: 600 YSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEF---SLPQFYATKGI 656
YSR++W Y L + +E ++ F LV NQ T +K +SD G EF L + GI
Sbjct: 541 YSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGI 600
Query: 657 VHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVL 716
H+ SC TPQQN + ERKH+H++ + ++LF +H P+ FW + A ++INRLPS VL
Sbjct: 601 HHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVL 660
Query: 717 DGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVY 776
P++ L PD ++L+VFGS C+ + KFDPR+ +CVFLG+ KGY +
Sbjct: 661 KNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCF 720
Query: 777 DLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQA---------------SFLSD 821
+ + ISRNV+F+E+ P+ + L S PL QA L
Sbjct: 721 YPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFS 780
Query: 822 EPFEYATQSPSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSS 881
+P + T + S+ Q EP+S NN + + +I S A+++
Sbjct: 781 KPIDLNTYAGSQVTEQLTDPEPTS-----NNEGSDEEVNPVAEEIAANQEQVINSHAMTT 835
Query: 882 SSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEAL 941
S + G P N A T MN EPK + A+KH W +A+ +EI +
Sbjct: 836 RSKA-GIQKP--------NTRYALITSRMN---TAEPKTLASAMKHPGWNEAVHEEINRV 883
Query: 942 ERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSP 1001
HTW LV D + KWV++ K DG++D+ KARLV KG+ Q EG+D+++TFSP
Sbjct: 884 HMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSP 943
Query: 1002 VAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQG-LHTEKPNQVCLLQ 1060
V + T+R++L +++S W + QLDV NAFLH +L E ++M P G + +KP VC L
Sbjct: 944 VVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLT 1003
Query: 1061 KSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGN 1120
K++YGLKQA R W+ T L GF S +D +L++ G LLLYVDD+LLTG+
Sbjct: 1004 KAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCH-QDGKILYLLLYVDDILLTGS 1062
Query: 1121 DLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGK 1180
D ++ + ++L +F +KD+G ++FLG++I G+ L+Q YA ++L +G+
Sbjct: 1063 DQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCN 1122
Query: 1181 PTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNV 1240
P TP+ Q L+++ ++ + +R L GKL YLT TRPDI + VN + Q + +PT
Sbjct: 1123 PMPTPLPQ-QLDNLNSEL-FAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTS 1180
Query: 1241 HEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLI 1300
R+LRYIKG G GL +S+ TL+A+SDSD AGC +TR+S TG+C+ LGS+LI
Sbjct: 1181 DFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLI 1240
Query: 1301 SWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIA 1360
SW +K+Q T S SS EAEYRA+ E+ W+S+LL DL P P +YCDN SA++++
Sbjct: 1241 SWSAKRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLS 1300
Query: 1361 HNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLG 1420
NP+ H R+KH + D H +RE+V GL+ I+++ QLAD+FTK L F + SKLG
Sbjct: 1301 ANPALHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLG 1360
Query: 1421 MYDIHSP 1427
+ +P
Sbjct: 1361 VSGSPTP 1367
Score = 62.0 bits (149), Expect = 2e-09
Identities = 68/297 (22%), Positives = 116/297 (38%), Gaps = 53/297 (17%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQD-------------HPVLPFWQRCN 47
L++ NY W + L ++ +GFV+G + P Q +P+ W +
Sbjct: 21 LTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTD 80
Query: 48 MLVLSWLIKSISVEIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNS 107
LV SWL ++S E+ + + +W L E F ++ + R L++ + L + +
Sbjct: 81 QLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSKKEKP 140
Query: 108 VSKFYTSMKTLWDELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQF-- 165
S + KT+ D L + PV DE K + FL GL +
Sbjct: 141 FSVYCREFKTICDALSSIGK-PV----------------DESMK--IFGFLNGLGRDYDP 181
Query: 166 --SGVRSQLMLLDNLPNVNRVFALIAQQERQF-SFENVSGSRALIA-----SRENSNDNR 217
+ ++S L L P N V + + + + S+E + +A S S
Sbjct: 182 ITTVIQSSLSKLPT-PTFNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYN 240
Query: 218 GSQSDHNRNSQSNYGGCQSSSG---NNRYSSKK-------CSYCGKMGHTVEDCYKK 264
+Q R+ Q+ G S+ G + SS + C CG+ GHT CY +
Sbjct: 241 PNQKGRGRSGQNKGRGGYSTRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYNR 297
>At1g36620 hypothetical protein
Length = 1152
Score = 650 bits (1678), Expect = 0.0
Identities = 395/1159 (34%), Positives = 614/1159 (52%), Gaps = 79/1159 (6%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQDHPVLPFWQRCNMLVLSWLIKSISV 60
L+ NY WA+ + +L K KLGF+DGT+ +P D P P W + N +++ WL S+
Sbjct: 42 LNGENYERWAKLTRNNLQAKQKLGFIDGTLTKPSSDSPDYPRWLQTNSMLVGWLYASLDP 101
Query: 61 EIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNSVSKFYTSMKTLWD 120
++ +SI D A +W LR R++ + R+ +L+ +I + +Q + + ++ +K +WD
Sbjct: 102 QVQKSISVVDNARVMWESLRTRYSVGNASRVHQLKYDIVACRQDGQTAANYFGKLKVMWD 161
Query: 121 ELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSG-----VRSQLMLL 175
+LD PL C CN R +C R+ ++ +FL GL+ G + +L
Sbjct: 162 DLDDYEPLLTCCCN-RPSCTHRVRQSQRRDHERIHQFLMGLDAAKFGTSRTNILGRLSRD 220
Query: 176 DNLPNVNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNSQSNYGGCQ 235
DN+ +++ +++ I +ER + + S+E D G N+ ++
Sbjct: 221 DNI-SLDSIYSEIIAEERHLT---------ITRSKEERVDAVGFAVQTGVNAIASVTRVN 270
Query: 236 SSSGNNRYSSKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDS 295
+ C++CG+ H+ + C+K HG P Y ++ + + G + S
Sbjct: 271 NMG--------PCTHCGRSNHSADTCFKLHGVPEW-------YTEKYGDTSSGRGRGRSS 315
Query: 296 VDQENASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPTKNGNGTS 355
+ G + A H + S+ S + +++ + K TS
Sbjct: 316 TPRGRGRGHGNSYKANNAQTSHPSSSASEFSDIPGVSKEAWSAIRNLL-----KQDTATS 370
Query: 356 QVLPTRNGNPLDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQ 415
+ N +D +++D+GA+ H+ L + + V LPN T KGT+
Sbjct: 371 SEKLSGKTNCVD--FLIDSGASHHMTGFLDLLTEIYEIPHSVVVLPNAKHTIATKKGTLI 428
Query: 416 ITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKG 475
+ + L +VLF+P+ LISV +L++ L IF D +C+IQD + +IG G
Sbjct: 429 LGANMKLTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDRTSKMLIGVGTESNG 488
Query: 476 LYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSL-VKGQSINE 534
+Y ++ + ++TS N + +++N LWH RLGHPS V +
Sbjct: 489 VYHLQRAEV--------VATSAN-------VVKWKTN-KALWHMRLGHPSSKVLSSVLPS 532
Query: 535 LFPYVQCSK--AHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSY 592
L + CS +CDVC AKQ R SF S ++ F IH D+WGP S G Y
Sbjct: 533 LEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHY 592
Query: 593 FLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEF-SLPQFY 651
FLTIVDD+SR WI+L+ + +EV +L+Q+F A+ + QF VKT+RS+NG EF SL ++
Sbjct: 593 FLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYF 652
Query: 652 ATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRL 711
A +GIVHQ SCV T QQN VERKH+HILNVAR+LLFQA LP FW +++ A +LINR
Sbjct: 653 AERGIVHQISCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRT 712
Query: 712 PSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTK 771
P+P+LDGK P++IL+ P +L+VFGSLCFA KF R ++C+F+G+ G K
Sbjct: 713 PTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQK 772
Query: 772 GYIVYDLKSNDIAISRNVVFHENMFPYPTQPS-DLNQHQSCPLPQASFLSDEPF------ 824
G+ +YD++S +SR+VVF E++FP+ + + D + +P D+ F
Sbjct: 773 GWRIYDIESQIFFVSRDVVFQEDIFPFADKKNKDTFSSPAAVIPSPILPYDDEFLDIYQI 832
Query: 825 -EYATQSPSEALTQPNTSEPSSDPVLDNNH--------RTSTRTRKQPSYLQDYHCSLIA 875
+ +P A+ N S PSS P++ R R R++ L+DY
Sbjct: 833 GDVPATNPLPAIIDVNDSPPSS-PIITATPAAASPPPLRRGLRQRQENVRLKDYQTYSAQ 891
Query: 876 STAVSSSSSSKGTS-YPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAM 934
+ + S + GT YP++ +S +P+ F+ I+ V P+ Y++A++ WR A+
Sbjct: 892 CESTQTLSDNIGTCIYPMANYVSGEIFSPSNQHFLAAISMVDPPQTYNQAIREKEWRNAV 951
Query: 935 DQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGID 994
E++ALE TW + P IG KWV+RIKY +GT++RYKARLV G Q EGID
Sbjct: 952 FFEVDALEDQGTWDITKLPQGVKAIGSKWVFRIKYNSNGTVERYKARLVALGNHQKEGID 1011
Query: 995 FIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEKPN 1054
F TF+PV KM T+R+LL +A++ +W LHQ+DV NAFLH L E+IYM P G T P+
Sbjct: 1012 FTKTFAPVVKMQTVRLLLDVAAAKDWELHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPS 1071
Query: 1055 QVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIK-KGTTGSFTALLLYVD 1113
VC L+KS+YGLKQA R W+ L +L GF+ S D++L+ +G+ +++YVD
Sbjct: 1072 LVCKLKKSIYGLKQAPRCWFEKLSTSLLKFGFTQSKKDYSLFTSIRGS--KVLHVIVYVD 1129
Query: 1114 DVLLTGNDLHEIQLVKESL 1132
DV++ G + E K +L
Sbjct: 1130 DVVICGKAVRENNTSKLAL 1148
>At4g10690 retrotransposon like protein
Length = 1515
Score = 642 bits (1657), Expect = 0.0
Identities = 453/1469 (30%), Positives = 690/1469 (46%), Gaps = 209/1469 (14%)
Query: 43 WQRCNMLVLSWLIKSISVEIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLK 102
W R + LV +W+ S+S E + ++ + A +VW L RF + R +LQ+ + +
Sbjct: 72 WTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQKRLGTCS 131
Query: 103 QGDNSVSKFYTSMKTLWDELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLN 162
+ ++ + + +K + D+LD + PV + ++ L GL
Sbjct: 132 KAGKTMDAYLSEVKNICDQLDSIG-FPV------------------TEQEKIFGVLNGLG 172
Query: 163 DQFSGVRSQL-MLLDNLPNV---NRVFALIAQQERQFSFENVSGSRALIA--------SR 210
++ + + + LD P + V+ L ++ ++ S +A SR
Sbjct: 173 KEYESIATVIEHSLDVYPGPCFDDVVYKLTTFDDKLSTYTANSEVTPHLAFYTDKSYSSR 232
Query: 211 ENSND---------NRGSQSDHNRNSQSNYG-GCQSSSGNNRYSSKKCSYCGKMGHTVED 260
N+N RGS S R +G G + SGN S C C K GH+
Sbjct: 233 GNNNSRGGRYGNFRGRGSYSSRGRGFHQQFGSGSNNGSGNG--SKPTCQICRKYGHSAFK 290
Query: 261 CYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQENASGQDAARFGFTADQYHHLL 320
CY + +EN +D +
Sbjct: 291 CYTRF--------------------------------EENYLPEDLP---------NAFA 309
Query: 321 ALLPPSESKASSSQHTASVNSCAQVLPTKNGNGTSQVLPTRNGNPLDTTWILDTGATDHI 380
A+ +++ASS + + A + T +G SQ T +G D + I+ G
Sbjct: 310 AMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQ---TYSG---DDSVIVGNGD---- 359
Query: 381 CNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFILANVLFLPNFEFNLISVHK 440
F H+ IP+++ G + L +VL P +L+SV K
Sbjct: 360 ------FLPITHIGTIPLNISQGTLP---------------LEDVLVCPGITKSLLSVSK 398
Query: 441 LVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPS 500
L F+ D +I+D +++ KGLY+ + S
Sbjct: 399 LTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLKDVPFQTYYSTRQ-------- 450
Query: 501 VHSSSICTFQSNVHNLWHYRLGHPS------LVKGQSINELFPYVQCSKAHVCDVCPVAK 554
QS+ +WH RLGHP+ L+K ++I V + +++C+ C + K
Sbjct: 451 ---------QSSDDEVWHQRLGHPNKEVLQHLIKTKAI-----VVNKTSSNMCEACQMGK 496
Query: 555 QKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDDYSRFTWIYLLKS*AE 614
R+ F S S+ + IH D+WGP + S GF Y++ +D+YSRFTW Y LK ++
Sbjct: 497 VCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKSD 556
Query: 615 VKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQF---YATKGIVHQTSCVETPQQNSI 671
++ F LV NQ++ + + D G EF +F A+ GI SC TPQQN I
Sbjct: 557 FFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGI 616
Query: 672 VERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVL-DGKCPFQILHKVLP 730
ER+H+++ + +L+F + +P W A + FL N LPS L D K P+++LH P
Sbjct: 617 AERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPP 676
Query: 731 DLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVV 790
T L+VFGS C+ + KFDP++ CVFLG+ KGY + + I R+V+
Sbjct: 677 VYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKGYRCLHPPTGKVYICRHVL 736
Query: 791 FHENMFPYPTQPSDLNQHQSCPL----------------PQASFLSDEPFEYATQSPS-- 832
F E FPY S PL ++ + D F AT S S
Sbjct: 737 FDERKFPYSDIYSQFQTISGSPLFTAWQKGFSSTALSRETPSTNVEDIIFPSATVSSSVP 796
Query: 833 --------EALTQPNTSEPSS-DPVLDNNHRTSTRTRKQP--SYLQDYHCSLIASTAVSS 881
E T P+ ++ D V+ + TST QP S H S + TA+SS
Sbjct: 797 TGCAPNIAETATAPDVDVAAAHDMVVPPSPITSTSLPTQPEESTSDQNHYSTDSETAISS 856
Query: 882 SSSSKGTSY---------PLSKVISYCNLAP-AYHTFVMNITAVV--------------- 916
+ + + + PL VIS AP H + + +
Sbjct: 857 AMTPQSINVSLFEDSDFPPLQSVISSTTAAPETSHPMITRAKSGITKPNPKYALFSVKSN 916
Query: 917 --EPKRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGT 974
EPK EA+K + W AM +E+ + TW LV +GCKWV++ K DG+
Sbjct: 917 YPEPKSVKEALKDEGWTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSDGS 976
Query: 975 LDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHA 1034
LDR KARLV +GY Q EG+D+++T+SPV + T+R +L +A+ W L QLDV NAFLH
Sbjct: 977 LDRLKARLVARGYEQEEGVDYVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHD 1036
Query: 1035 QLDEEIYMSLPQGLH-TEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADH 1093
+L E ++M+ P G +P+ VC L+K++Y LKQA R W+ L GF S +D
Sbjct: 1037 ELKETVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDP 1096
Query: 1094 TLYI-KKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEI 1152
+L++ KG F LLLYVDD++LTGN+ +Q + L +FR+KDMG +FLG++
Sbjct: 1097 SLFVYLKGRDVMF--LLLYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQA 1154
Query: 1153 ARSKAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGK 1212
G+ L+Q KY +LL ++G+ TP+ G + P + + +RRL GK
Sbjct: 1155 HYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPTPLQLDLLQG--NNKPFPEPTYFRRLAGK 1212
Query: 1213 LLYLTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTA 1272
L YLT TRPDI + VN + Q + APT R+L Y+KG G+ +++ + L
Sbjct: 1213 LQYLTLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSSNTDSVLRC 1272
Query: 1273 FSDSDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWL 1332
+SDSDWAGC DTR+S G+C FLG ++ISW +K+ T S+SS EAEYR ++ EV W+
Sbjct: 1273 YSDSDWAGCKDTRRSTGGFCTFLGYNIISWSAKRHPTVSKSSTEAEYRTLSFAASEVSWI 1332
Query: 1333 SYLLHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLP 1392
+LL ++ P MYCDN SA++++ NP+ H R+KH +VD + VRE+V G + +
Sbjct: 1333 GFLLQEIGLPQQQIPEMYCDNLSAVYLSANPALHSRSKHFQVDYYYVRERVALGALTVKH 1392
Query: 1393 IASSHQLADIFTKPLTPAPFRHIFSKLGM 1421
I +S QLADIFTK L APF + KLG+
Sbjct: 1393 IPASQQLADIFTKSLPQAPFCDLRFKLGV 1421
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 622 bits (1605), Expect = e-178
Identities = 353/859 (41%), Positives = 498/859 (57%), Gaps = 94/859 (10%)
Query: 592 YFLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFY 651
YFLT+VDD +R TW+Y++K+ +EV N+ F L+ Q+ +K IRSDN KE + +F
Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAFTKFV 311
Query: 652 ATKGIVHQTSCVETPQQNSIVER------------KHQHILNVARALLFQAHLPKIFWAH 699
+G++HQ SC TPQQNS+VER H +++ R ++F H K
Sbjct: 312 KEQGMIHQFSCAYTPQQNSVVERYPSGYKGYKVLDLESHSISITRNVVF--HETKF---- 365
Query: 700 AIVHAVFL---INRLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDP 756
+ FL ++ P+ +L P + +P +L+ + S S + P
Sbjct: 366 PFKTSKFLKESVDMFPNSILPLPAPLHFVES-MPLDDDLRADDNNASTSNSASSASSIPP 424
Query: 757 RAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQA 816
L T+ D+ +N + I+R P+ L+++ +P
Sbjct: 425 -------LPSTVNTQNTDALDIDTNSVPIARPK-------RNAKAPAYLSEYHCNSVPFL 470
Query: 817 SFLSDEPFEYATQSPSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIAS 876
S LS + S ++ P++S P T P S
Sbjct: 471 SSLS--------PTTSTSIETPSSSIP-----------PKKITTPYP-----------MS 500
Query: 877 TAVSSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQ 936
TA+S Y L P +H+++ EPK +++A+K + W +A ++
Sbjct: 501 TAIS-----------------YDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANE 543
Query: 937 EIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFI 996
E+ ALE+N TWI+ K +GCKWV+ IKY DG+++RYKARLV +G+TQ EGID++
Sbjct: 544 ELHALEQNKTWIVESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYM 603
Query: 997 DTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLH------- 1049
+TFSPVAK ++++LL LA++ W L Q+DV NAFLH +LDEEIYMSLPQG
Sbjct: 604 ETFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISL 663
Query: 1050 TEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALL 1109
KP VC L KSLYGLKQASRQWY L F S AD+T+++K T S +L
Sbjct: 664 PSKP--VCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCT-SIIVVL 720
Query: 1110 LYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALE 1169
+YVDD+++ ND ++ +KE L ++F+IKD+G A+FFLGLEIARS GI + QRKYA
Sbjct: 721 VYVDDLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQN 780
Query: 1170 LLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQ 1229
LL D GL G KP++ PMD + T L + +SYR L+G+LLYL TRPDI + V+
Sbjct: 781 LLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHT 840
Query: 1230 LSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSIT 1289
LSQFLSAPT++H AAH+VLRY+KGNPG GL Y A S L FSD+DW C D+R+S+T
Sbjct: 841 LSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVT 900
Query: 1290 GYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSM 1349
G+C++LG+SLI+W+SKKQ+ SRSS E+EYR++A CE+ WL LL DL + P +
Sbjct: 901 GFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKL 960
Query: 1350 YCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTP 1409
+CDN+SA+H+A NP +HERTKHIE+DCH VR++++ G + L + + +QLADI TKPL P
Sbjct: 961 FCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHP 1020
Query: 1410 APFRHIFSKLGMYDIHSPV 1428
IFS L + SPV
Sbjct: 1021 VQ-SPIFSLLFRFTGTSPV 1038
Score = 103 bits (256), Expect = 9e-22
Identities = 64/156 (41%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 370 WILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFILANVLFLP 429
WI+D+GA+ H+C+ L+ F HV + V+LPNG T GTI IT + IL NVL +P
Sbjct: 99 WIIDSGASSHVCSDLTMFRELIHVSGVTVTLPNGTRVAITHTGTICITSTLILHNVLLVP 158
Query: 430 NFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSISSLAS 489
+F+FNLISV LVK L Y F D C IQ+ MIG + LYI
Sbjct: 159 DFKFNLISVCCLVKTLSYSAHFFADCCYIQELTRGLMIGRGKTYNNLYILETQ------- 211
Query: 490 CNSISTSVNPSVHSSSICTFQSNVHN---LWHYRLG 522
TS +PS+ ++S +F V + LWH RLG
Sbjct: 212 ----RTSFSPSLPAAS--SFTGTVQDDCLLWHQRLG 241
>At1g53810
Length = 1522
Score = 615 bits (1587), Expect = e-176
Identities = 394/1132 (34%), Positives = 575/1132 (49%), Gaps = 109/1132 (9%)
Query: 370 WILDTGATDHICNT---LSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFI-LANV 425
WI D+ A+ H+ N L Y + I V+ N + T T G+I + I L V
Sbjct: 326 WIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITHTGSGSIASSSGKIPLKEV 385
Query: 426 LFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSIS 485
L P+ +L+SV KL + F+ D I D K++ R GLY + +
Sbjct: 386 LVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQ 445
Query: 486 SLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPS------LVKGQSINELFPYV 539
L S S S +WH RLGH + L +SI + V
Sbjct: 446 VLYSTRQNSAS-----------------SEVWHRRLGHANAEVLHQLASSKSIIIINKVV 488
Query: 540 QCSKAHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDD 599
+ VC+ C + K R+ F LS ++ + IH D+WGP S+ GF Y++ +D
Sbjct: 489 KT----VCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRYYVVFIDH 544
Query: 600 YSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFYA---TKGI 656
YSRFTW Y LK ++ + F LV NQ +K + D G EF QF GI
Sbjct: 545 YSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFLKHLQDHGI 604
Query: 657 VHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVL 716
SC TPQQN + ERKH+HI+ + +++FQ+ LP +W + A F+IN LP+ L
Sbjct: 605 QQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLKYWLESFFTANFVINLLPTSSL 664
Query: 717 DG-KCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIV 775
D + P+Q L+ P+ + L+VFG C+ + TKFDPR+ +CVFLG+ KGY
Sbjct: 665 DNNESPYQKLYGKAPEYSALRVFGCACYPTLRDYASTKFDPRSLKCVFLGYNEKYKGYRC 724
Query: 776 YDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQASFLSDEPFEYATQS----- 830
+ I ISR+VVF EN P+ + S L+ PL +A F S F + T +
Sbjct: 725 LYPPTGRIYISRHVVFDENTHPFESIYSHLHPQDKTPLLEAWFKS---FHHVTPTQPDQS 781
Query: 831 --PSEALTQPNTSEPS---------------SDPVLDNNHRTS--------TRTRKQPSY 865
P ++ QP T++ S SD +N S T S
Sbjct: 782 RYPVSSIPQPETTDLSAAPASVAAETAGPNASDDTSQDNETISVVSGSPERTTGLDSASI 841
Query: 866 LQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCNLAPAY-------------------- 905
YH S+ S + SS +S S + +APA
Sbjct: 842 GDSYHSPTADSSHPSPARSSPASSPQGSPI----QMAPAQQVQAPVTNEHAMVTRGKEGI 897
Query: 906 ------HTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPI 959
+ + + ++ EPK +EA+KH W AM +E+ + TW LV + +
Sbjct: 898 SKPNKRYVLLTHKVSIPEPKTVTEALKHPGWNNAMQEEMGNCKETETWTLVPYSPNMNVL 957
Query: 960 GCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYN 1019
G WV+R K DG+LD+ KARLV KG+ Q EGID+++T+SPV + T+R++L +A+
Sbjct: 958 GSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETYSPVVRTPTVRLILHVATVLK 1017
Query: 1020 WFLHQLDVDNAFLHAQLDEEIYMSLPQG-LHTEKPNQVCLLQKSLYGLKQASRQWYTTLC 1078
W L Q+DV NAFLH L E +YM P G + KP+ VCLL KSLYGLKQ+ R W+
Sbjct: 1018 WELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCLLHKSLYGLKQSPRAWFDRFS 1077
Query: 1079 KALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRI 1138
L GF S D +L++ + LLLYVDD+++TGN+ + + +L+ +FR+
Sbjct: 1078 NFLLEFGFICSLFDPSLFVYS-SNNDVILLLLYVDDMVITGNNSQSLTHLLAALNKEFRM 1136
Query: 1139 KDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDT 1198
KDMG+ +FLG++I G+ ++Q+KYA +LL + + P TP+ + D
Sbjct: 1137 KDMGQVHYFLGIQIQTYDGGLFMSQQKYAEDLLITASMANCSPMPTPLPLQLDRVSNQDE 1196
Query: 1199 PLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGC 1258
SD + +R L GKL YLT TRPDI + VN + Q + P+ R+LRYIKG
Sbjct: 1197 VFSDPTYFRSLAGKLQYLTLTRPDIQFAVNFVCQKMHQPSVSDFNLLKRILRYIKGTVSM 1256
Query: 1259 GLFYPADSSTT---------LTAFSDSDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTT 1309
G+ Y ++SS+ L+A+SDSD+A C +TR+S+ GYC F+G ++ISW SKKQ T
Sbjct: 1257 GIQYNSNSSSVVSAYESDYDLSAYSDSDYANCKETRRSVGGYCTFMGQNIISWSSKKQPT 1316
Query: 1310 TSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERT 1369
SRSS EAEYR+++ T E++W+S +L ++ ++CDN SA+++ NP++H RT
Sbjct: 1317 VSRSSTEAEYRSLSETASEIKWMSSILREIGVSLPDTPELFCDNLSAVYLTANPAFHART 1376
Query: 1370 KHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKLGM 1421
KH +VD H +RE+V + + I QLADIFTK L F + KLG+
Sbjct: 1377 KHFDVDHHYIRERVALKTLVVKHIPGHLQLADIFTKSLPFEAFTRLRFKLGV 1428
Score = 67.4 bits (163), Expect = 6e-11
Identities = 67/292 (22%), Positives = 113/292 (37%), Gaps = 42/292 (14%)
Query: 1 LSEGNYHNWARAMKMSLLTKNKLGFVDGTIAEPPQD-------------HPVLPFWQRCN 47
L++ NY W + L + LGFV G+I+ P Q +P W + +
Sbjct: 19 LNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQTRSVTHNNVTSEEPNPEFYTWHQTD 78
Query: 48 MLVLSWLIKSISVEIAQSILWRDKATDVWNELRERFAQADLFRISELQEEIFSLKQGDNS 107
+V SWL+ S + +I ++ + VW L F + R+ ELQ + +L++ DN+
Sbjct: 79 QVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFELQRRLQTLEKKDNT 138
Query: 108 VSKFYTSMKTLWDEL-DILNPLPVCTCNPRCACG----------AIKNIEDER---NKNQ 153
+ F +K + D+L + +P+P G I+N D + ++
Sbjct: 139 MEVFLKDLKHICDQLASVGSPVPEKMKIFSALNGLGREYEPIKTTIENSVDSNPSLSLDE 198
Query: 154 VVRFLRGLNDQFSGVRSQLMLLDNLPNVNRVFAL-IAQQERQFSFENVSGSRALIASREN 212
V LRG +D+ ++ P ++ A + + + N G R N
Sbjct: 199 VASKLRGYDDRLQSYVTE-------PTISPHVAFNVTHSDSGYYHNNNRGK-----GRSN 246
Query: 213 SNDNRGSQSDHNRNSQSNYGGCQSSSGNNRYSSKKCSYCGKMGHTVEDCYKK 264
S + S S R S N S C CGK GH C+ +
Sbjct: 247 SGSGKSSFSTRGRGFHQQISPTSGSQAGN--SGLVCQICGKAGHHALKCWHR 296
>At4g27210 putative protein
Length = 1318
Score = 604 bits (1558), Expect = e-172
Identities = 373/1097 (34%), Positives = 557/1097 (50%), Gaps = 101/1097 (9%)
Query: 370 WILDTGATDHICNT---LSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFI-LANV 425
W+ D+ AT H+ N+ L Y + I V N + T T + + + L +V
Sbjct: 177 WLPDSAATAHVTNSPRSLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASSSGTVPLTDV 236
Query: 426 LFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSIS 485
L P+ +L+S+ KL + + FE D + D K++ L N+ +
Sbjct: 237 LVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLL--------LMGSNRDGLY 288
Query: 486 SLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQSINELFPYVQCSKAH 545
L + S+S +WH RLGHP
Sbjct: 289 CLKDDKQFQAFFSTRQRSAS--------DEVWHRRLGHPH-------------------- 320
Query: 546 VCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIVSLHGFSYFLTIVDDYSRFTW 605
Q + +H D+WGP +I S+ GF Y+ +D YSRF+W
Sbjct: 321 -------------------PQILQPLERVHCDLWGPTTITSVQGFRYYAVFIDHYSRFSW 361
Query: 606 IYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFYA---TKGIVHQTSC 662
IY LK ++ N+ F LV NQ + + D G EF +F + GI Q SC
Sbjct: 362 IYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSC 421
Query: 663 VETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVL-DGKCP 721
TPQQN + ERKH+H++ + ++LFQ+H+P FW A A FLIN LP+ L + P
Sbjct: 422 PHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISP 481
Query: 722 FQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSN 781
++ L+ PD T+L+ FGS CF + KF+P + +CVFLG+ KGY +
Sbjct: 482 YEKLYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPTG 541
Query: 782 DIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQASFLS-DEPFEYATQSPSEA------ 834
+ ISR+V+F E+++P+ L+ PL A S D P + SPS
Sbjct: 542 RLYISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTSTSPSSRSPLFTS 601
Query: 835 -----LTQPNTSE-PSSDPVLDNNHRTSTRTRKQPSY----LQDYHCSLIASTAVSSSSS 884
L Q T P+ P+ +H ++ T++ P + D+ + I ++ SS +
Sbjct: 602 ADFPPLPQRKTPLLPTLVPISSVSHASNITTQQSPDFDSERTTDFDSASIGDSSHSSQAG 661
Query: 885 SKG------TSYPLSKVISYCNLAPAY-------------HTFVMNITAVVEPKRYSEAV 925
S S + + + N+ P + F+ + + EPK + A+
Sbjct: 662 SDSEETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRYVFLSHKVSYPEPKTVTAAL 721
Query: 926 KHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVK 985
KH W AM +EI TW LV D +G KWV+R K DGTL++ KAR+V K
Sbjct: 722 KHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTLNKLKARIVAK 781
Query: 986 GYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLP 1045
G+ Q EGID+++T+SPV + T+R++L LA++ NW + Q+DV NAFLH L E +YM+ P
Sbjct: 782 GFLQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGDLKETVYMTQP 841
Query: 1046 QG-LHTEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGS 1104
G + KP+ VCLL KS+YGLKQ+ R W+ L GF S +D +L+I +
Sbjct: 842 AGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIY-AHNNN 900
Query: 1105 FTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQR 1164
LLLYVDD+++TGN + + +L+ +FR+ DMG+ +FLG+++ R + G+ ++Q+
Sbjct: 901 LILLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGLFMSQQ 960
Query: 1165 KYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIA 1224
KYA +LL + + P TP+ + SD + +R + GKL YLT TRPDI
Sbjct: 961 KYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQ 1020
Query: 1225 YVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDT 1284
+ VN + Q + PT R+LRYIKG G+ Y DS T L A+SDSDW C T
Sbjct: 1021 FAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWGNCKQT 1080
Query: 1285 RKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPS 1344
R+S+ G C F+G++L+SW SKK T SRSS EAEY++++ E+ WLS LL +L+ P
Sbjct: 1081 RRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLP 1140
Query: 1345 APVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFT 1404
++CDN SA+++ NP++H RTKH ++D H VRE+V + + I S Q+ADIFT
Sbjct: 1141 DTPELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFT 1200
Query: 1405 KPLTPAPFRHIFSKLGM 1421
K L F H+ KLG+
Sbjct: 1201 KSLPYEAFIHLRGKLGV 1217
>At2g06840 putative retroelement pol polyprotein
Length = 1102
Score = 570 bits (1468), Expect = e-162
Identities = 320/811 (39%), Positives = 466/811 (57%), Gaps = 66/811 (8%)
Query: 617 NLVQEFCALVANQFETAVKTIRSDNGKEFSL-PQFYATKGIVHQTSCVETPQQNSIVERK 675
+L++ FCA+ QF V++IRSDNG EF ++ GI+H+TSCV+TPQQN+ VERK
Sbjct: 353 SLIRNFCAMADRQFRKPVRSIRSDNGTEFMCHTSYFQEHGILHETSCVDTPQQNARVERK 412
Query: 676 HQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVLDGKCPFQILHKVLPDLTNL 735
H+HILNVAR LFQ + P PSPVL GK P+++L P L
Sbjct: 413 HRHILNVARTCLFQGNFPT-----------------PSPVLKGKTPYEVLFGKQPSYDML 455
Query: 736 KVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLKSNDIAISRNVVFHENM 795
+ FG LC+A + KF R+++C+F+G+ T +D I + N
Sbjct: 456 RTFGCLCYAHIRPRDKDKFASRSRKCIFIGYPHETATPNTHD----SIDPTSTSSDENNT 511
Query: 796 FPYPTQPSDLNQHQSCPLPQASFLSDEPFEYATQSPSEALTQPNTSEPSSDPVLDNNHRT 855
P P P H + + ++ ++ + ++S P +L HR
Sbjct: 512 PPEPVTPQAEQPHSPSSISSPHIVHNKGSVHSRHLNEDH----DSSSPGLPELLGKGHRP 567
Query: 856 STRTRKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPLSKVISYCNLAPAYHTFVMNITAV 915
+ P YL+DY + S+ +SS ++ +S +S ++A F+ I
Sbjct: 568 ----KHPPVYLKDYVAHKVHSSPHTSSPGLSDSN--VSPTVSANHIA-----FMAAILDS 616
Query: 916 VEPKRYSEAVKHDSWRKAMDQEIEALERNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTL 975
E + + V W AM +EIEALE NHTW + D PH K I KWVY++K+ DGTL
Sbjct: 617 NEQNHFKDDVLIKEWCDAMQKEIEALEANHTWDVTDLPHGKKAISSKWVYKLKFNSDGTL 676
Query: 976 DRYKARLVVKGYTQLEGIDFIDTFSPVAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQ 1035
+R+KARLVV G Q EGIDF +TF+PVAKMTT+R+LLA+A++ +W + Q+DV NAFLH
Sbjct: 677 ERHKARLVVMGNHQKEGIDFKETFAPVAKMTTVRLLLAVAAAKDWDVFQMDVHNAFLHGD 736
Query: 1036 LDEEIYMSLPQGLHTEKPNQVCLLQKSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTL 1095
L++E SLYGLKQA R W+ L AL LGF+ S D++L
Sbjct: 737 LEQE----------------------SLYGLKQAPRCWFAKLSTALRKLGFTQSYEDYSL 774
Query: 1096 YIKKGTTGSFTALLLYVDDVLLTGNDLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARS 1155
+ G+ L+YVDD ++ GN+L I KE LH F +KD+G+ K+FLGLE++R
Sbjct: 775 F-SLNRDGTVIHFLVYVDDFIIVGNNLKAIDHFKEHLHKCFHMKDLGKLKYFLGLEVSRG 833
Query: 1156 KAGIVLNQRKYALELLSDSGLLGGKPTTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLY 1215
G L+Q+KYAL++++++GLLG KP+ PM+ K G + + + YRRL+ + +Y
Sbjct: 834 ADGFCLSQQKYALDIINEAGLLGYKPSAVPMELHHKLGSISSPVFDNPAQYRRLVDRFIY 893
Query: 1216 LTTTRPDIAYVVNQLSQFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSD 1275
LT TRPD++Y V+ LSQF+ P H A R++RY+KG+P G+ +D + +LTA+ D
Sbjct: 894 LTITRPDLSYAVHILSQFMQTPLEAHWHATLRLVRYLKGSPDQGILLRSDRALSLTAYCD 953
Query: 1276 SDWAGCLDTRKSITGYCMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYL 1335
SD+ C TR+S++ Y ++LG + ISW++KKQ T S SS EAEYRAMA T+ E++WL L
Sbjct: 954 SDYNPCPRTRRSLSAYVLYLGDTPISWKTKKQDTVSSSSAEAEYRAMAYTLKEIKWLKAL 1013
Query: 1336 LHDLQAPPSAPVSMYCDNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIAS 1395
+ L + P+ ++CD+Q+A+HIA NP +HERTKHIE DCH VR+ V ++ I++
Sbjct: 1014 MTTLGVDHTQPILLFCDSQAAIHIAANPVFHERTKHIEKDCHQVRDAVTDKVISTPHIST 1073
Query: 1396 SHQLADIFTKPLTPAPFRHIFSKLGM--YDI 1424
+ D+ TK L F + S LG YD+
Sbjct: 1074 T----DLLTKALPRPTFERLLSTLGTCNYDL 1100
Score = 92.8 bits (229), Expect = 1e-18
Identities = 93/393 (23%), Positives = 157/393 (39%), Gaps = 58/393 (14%)
Query: 164 QFSGVRSQLMLLDNLPNVNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDH 223
+F+ +RS++ D LP+ NRV++ + + ++ +A + + ++
Sbjct: 14 RFAPIRSKITDEDPLPSHNRVYSRVIRGQQNLD----------VARSKETTNSEAINFSV 63
Query: 224 NRNSQSNYGGCQSSSGNNRYSSKKCSYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSA 283
S + +R C++C + GH V DC+ HGFP + Y Q+
Sbjct: 64 KTPSAPQVAAVYAPKPRDR----SCTHCHRQGHDVTDCFLVHGFPEWY------YEQKGG 113
Query: 284 NLAHSTGEDQDSVDQENASGQDAARFGFTADQYHHLLALLPPSESKASSSQHTASVNSCA 343
+ S + S + A R G ++ + + + SSS + +
Sbjct: 114 SRVSSDNREVVS----RLENKPAKREGRSSKGNGRGRGRVNSARAPLSSSNGSDQITQLI 169
Query: 344 QVLPTKNGNGTSQVLPTRNGNPLDTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNG 403
+L + TS+ L +GN T I+D+GA+ H+ S + P V+ P+G
Sbjct: 170 SLLQAQRPKSTSERL---SGNTCLTDVIIDSGASHHMTGDCSILVDVFDIIPSAVTKPDG 226
Query: 404 IVETTTIKGTIQITPSFILANVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNA 463
T T+ ++ S+ L +VLF+P+F+ LISV KL+K +
Sbjct: 227 KASCATKCVTLLLSSSYKLQDVLFVPDFDCTLISVSKLLK--------------QTGPFS 272
Query: 464 CKMIGTVRAVKGLYIFNKSSISSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGH 523
+IG + +Y F ++S +S STS LWH RLGH
Sbjct: 273 RTLIGAGEVRERVYYFTGVLVASAHKTSSDSTSSGA----------------LWHRRLGH 316
Query: 524 PSLVKGQSINELFPYVQ-CSKAHVCDVCPVAKQ 555
PS S+ E + K CD C AKQ
Sbjct: 317 PSTSFLLSLPECHQSSKDLGKIDSCDTCSRAKQ 349
>At3g60170 putative protein
Length = 1339
Score = 555 bits (1430), Expect = e-158
Identities = 349/1085 (32%), Positives = 559/1085 (51%), Gaps = 73/1085 (6%)
Query: 367 DTTWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSFI---LA 423
D W LD+G ++H+ + +FS + V L N + KG++++ + + +
Sbjct: 297 DEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIP 356
Query: 424 NVLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSS 483
V ++P NL+S+ +L E L ++ CK+ Y +K +
Sbjct: 357 EVYYVPELRNNLLSLGQLQ---------ERGLAILIRDGTCKV----------YHPSKGA 397
Query: 484 ISSL-ASCNSISTSVNPSVHSSSICTFQSNV----HNLWHYRLGHPS-----LVKGQSIN 533
I S N + + +S+C V ++LWH R GH + L+ + +
Sbjct: 398 IMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMV 457
Query: 534 ELFPYVQCSKAHVCDVCPVAKQKRMSFPLSVT-QSTAIFQLIHVDIWGPVSIVSLHGFSY 592
P ++ +K +C +C KQ R S + +S+ QL+H DI GP++ +S G Y
Sbjct: 458 IGLPILKATK-EICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRY 516
Query: 593 FLTIVDDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFS---LPQ 649
L+ +DD++R TW+Y L +E + F A V + + +R+D G EF+ +
Sbjct: 517 ILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGE 576
Query: 650 FYATKGIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLIN 709
F + GI Q + TPQQN + ERK++ I+N R++L + +PK+FW+ A +V + N
Sbjct: 577 FCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQN 636
Query: 710 RLPSPVLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPG 769
R P+ ++G P + P + +VFG + + R+K D ++K+CVFLG
Sbjct: 637 RSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEE 696
Query: 770 TKGYIVYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQ---SCPLPQASFLSDEPFEY 826
+K + +YD I IS++VVF E+ + +D+ + C S+
Sbjct: 697 SKAWRLYDPVMKKIVISKDVVFDEDK-SWDWDQADVEAKEVTLECGDEDDEKNSEVVEPI 755
Query: 827 ATQSPSEALTQPNTSE----PSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSS 882
A SP+ + N S S P TR R+ P ++ DY
Sbjct: 756 AVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADY------------- 802
Query: 883 SSSKGTSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALE 942
G + + +S ++ + +P ++ +AVK WR+AM+ EIE++
Sbjct: 803 --ETGEGEEIEENLS---------VMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIV 851
Query: 943 RNHTWILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPV 1002
+N+TW L P TPIG KWVY+ K +DG +D+YKARLV KGY Q GID+ + F+PV
Sbjct: 852 KNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPV 911
Query: 1003 AKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTE-KPNQVCLLQK 1061
A++ T+R +LA++S +NW + QLDV +AFLH +L EE+Y+ P+G E + +V L+K
Sbjct: 912 ARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRK 971
Query: 1062 SLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGND 1121
+LYGLKQA R WY+ + F ++HTL+ K G+ + LYVDD++ TG+D
Sbjct: 972 ALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKT-RVGNILIVSLYVDDLIFTGSD 1030
Query: 1122 LHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGKP 1181
K+S+ +F + D+G+ K FLG+E+ +S GI + QR+YA E+L+ G+
Sbjct: 1031 KAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNA 1090
Query: 1182 TTTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVH 1241
P+ K + D + +++L+G L+YLT TRPD+ Y V +S+F+S P H
Sbjct: 1091 VKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSH 1150
Query: 1242 EAAAHRVLRYIKGNPGCGLFY--PADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSL 1299
AA R+LRY+KG G+FY + S L AF+DSD+AG L+ R+S +G+ + S
Sbjct: 1151 WLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGA 1210
Query: 1300 ISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHI 1359
I W SKKQ + S+ EAEY A A C+ WL +L L A + + CDN S + +
Sbjct: 1211 ICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQL 1270
Query: 1360 AHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFRHIFSKL 1419
+ +P H ++KHIEV H +R+ V +V L + Q+ADIFTKPL F + + L
Sbjct: 1271 SKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALL 1330
Query: 1420 GMYDI 1424
GM ++
Sbjct: 1331 GMVNM 1335
Score = 32.3 bits (72), Expect = 2.0
Identities = 52/274 (18%), Positives = 114/274 (40%), Gaps = 39/274 (14%)
Query: 3 EGNYHNWARAMKMSLLTKNKLGFVD--------GTIAEPPQDHPVLPFWQRCNMLVLSWL 54
+G Y W+ M+ L ++ V+ GT + + ++ V ++L
Sbjct: 16 DGYYDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAKLKDLKVKNFL 75
Query: 55 IKSISVEIAQSILWRDKATDVWNELRERFAQADLFRISELQE-----EIFSLKQGDNSVS 109
++I EI ++IL + + +W +++++ + + ++LQ E+ ++K+G+ +
Sbjct: 76 FQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKEGE-KID 134
Query: 110 KFYTSMKTLWDELDILNPLPVCTCNPRCACGAIKNIEDERNKNQVVRFLRGLNDQFSGVR 169
F L L ++N + N E V + LR L +F+ V
Sbjct: 135 TF------LGRTLTVVNKMKT-------------NGEVMEQSTIVSKILRSLTPKFNYVV 175
Query: 170 SQLMLLDNLP--NVNRVFALIAQQERQFSFENVSGSRALIASRENSNDNRGSQSDHNRNS 227
+ ++L +++ + + E++ + +V +AL + E ++G R S
Sbjct: 176 CSIEESNDLSTLSIDELHGSLLVHEQRLN-GHVQEEQALKVTHE-ERPSQGRGRGVFRGS 233
Query: 228 QSNYGGCQSSSGNNRYSSKKCSYCGKMGHTVEDC 261
+ G + SG NR + +C C +GH +C
Sbjct: 234 RGR-GRGRGRSGTNR-AIVECYKCHNLGHFQYEC 265
>At4g23160 putative protein
Length = 1240
Score = 543 bits (1399), Expect = e-154
Identities = 283/588 (48%), Positives = 382/588 (64%), Gaps = 23/588 (3%)
Query: 828 TQSPSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSKG 887
+ S + + N +P + +HR RTRK P+YLQDY+C +AS +
Sbjct: 10 SSSSIDIMPSANIQNDVPEPSVHTSHR---RTRK-PAYLQDYYCHSVASLTI-------- 57
Query: 888 TSYPLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKHDSWRKAMDQEIEALERNHTW 947
+ +S+ +SY ++P YH+F++ I EP Y+EA + W AMD EI A+E HTW
Sbjct: 58 --HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTW 115
Query: 948 ILVDKPHDKTPIGCKWVYRIKYKQDGTLDRYKARLVVKGYTQLEGIDFIDTFSPVAKMTT 1007
+ P +K PIGCKWVY+IKY DGT++RYKARLV KGYTQ EGIDFI+TFSPV K+T+
Sbjct: 116 EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTS 175
Query: 1008 LRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEK-----PNQVCLLQKS 1062
++++LA+++ YN+ LHQLD+ NAFL+ LDEEIYM LP G + PN VC L+KS
Sbjct: 176 VKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKS 235
Query: 1063 LYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGNDL 1122
+YGLKQASRQW+ L GF S +DHT ++K T F +L+YVDD+++ N+
Sbjct: 236 IYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT-LFLCVLVYVDDIIICSNND 294
Query: 1123 HEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVLNQRKYALELLSDSGLLGGKPT 1182
+ +K L + F+++D+G K+FLGLEIARS AGI + QRKYAL+LL ++GLLG KP+
Sbjct: 295 AAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 1183 TTPMDSSQKFGLSTDTPLSDISSYRRLIGKLLYLTTTRPDIAYVVNQLSQFLSAPTNVHE 1242
+ PMD S F + D +YRRLIG+L+YL TR DI++ VN+LSQF AP H+
Sbjct: 355 SVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQ 414
Query: 1243 AAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSLISW 1302
A ++L YIKG G GLFY + + L FSD+ + C DTR+S GYCMFLG+SLISW
Sbjct: 415 QAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISW 474
Query: 1303 RSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHIAHN 1362
+SKKQ S+SS EAEYRA++ E+ WL+ +LQ P S P ++CDN +A+HIA N
Sbjct: 475 KSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATN 534
Query: 1363 PSYHERTKHIEVDCHIVREK-VQQGLVHLLPIASSHQLADIFTKPLTP 1409
+HERTKHIE DCH VRE+ V Q + A Q D FT+ L+P
Sbjct: 535 AVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLSP 580
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 535 bits (1377), Expect = e-151
Identities = 408/1328 (30%), Positives = 621/1328 (46%), Gaps = 152/1328 (11%)
Query: 143 KNIEDERNKNQVVRFLRGLNDQFSGVRSQ---LMLLDNLPNVNRVFALIAQQERQFSFEN 199
+N + + N + ++ + LN V + ++LL +LP R L+ + S E
Sbjct: 104 ENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPA--RYDGLVETMKYSNSREK 161
Query: 200 VSGSRALIASREN----SNDNRGSQSDH-NRNSQSNYGGCQSSSGNNRYSSKK------C 248
+ ++A+R+ S +NR H R Q + G NR SK C
Sbjct: 162 LRLDDVMVAARDKERELSQNNRPVVEGHFARGRPDGKNNNQGNKGKNRSRSKSADGKRVC 221
Query: 249 SYCGKMGHTVEDCYKKHGFPPGFKFKNPKYAQRSANLAHSTGEDQDSVDQENASGQDAAR 308
CGK GH + CY K+ +R N + G D
Sbjct: 222 WICGKEGHFKKQCY--------------KWIER--NKSKQQGSDN--------------- 250
Query: 309 FGFTADQYHHLLALLPPSESKASSSQHTASVNSCAQVLPTKNGNGTSQVLPTRNGNPLDT 368
++S ++ T + N +L T + L + +
Sbjct: 251 -------------------GESSLAKSTEAFNPAMVLL------ATDETLVVTDS--IAN 283
Query: 369 TWILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPS----FILAN 424
W+LDTG + H+ +F +K + V + N G+I+I S IL +
Sbjct: 284 EWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTD 343
Query: 425 VLFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSI 484
V ++PN NLIS+ L ED C + + G ++ VKG K
Sbjct: 344 VRYMPNMTRNLISLGTL----------EDRGCWFKSQD-----GILKIVKGCSTILKGQK 388
Query: 485 SSLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSLVKGQSINELFPYVQCSKA 544
T S S+ + + LWH RLGH S Q E+ C +
Sbjct: 389 RDTLYILDGVTEEGESHSSAEV----KDETALWHSRLGHMS----QKGMEILVKKGCLRR 440
Query: 545 HV------CDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWG-PVSIVSLHGFSYFLTIV 597
V C+ C KQ R+SF + + +H D+WG P + SL YF++ V
Sbjct: 441 EVIKELEFCEDCVYGKQHRVSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFV 500
Query: 598 DDYSRFTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFS---LPQFYATK 654
DDYSR WIY L+ E E+ +V NQ + VK +R+DNG E+ +F +
Sbjct: 501 DDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEE 560
Query: 655 GIVHQTSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSP 714
GIV +C TPQQN I ER ++ I++ R++L ++ + K FWA A AV+LINR PS
Sbjct: 561 GIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPST 620
Query: 715 VLDGKCPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYI 774
++ P + LPDL++L+ FG L + + + + K +PR+K+ +F + G KGY
Sbjct: 621 AINFDLPEEKWTGALPDLSSLRKFGCLAY---IHADQGKLNPRSKKGIFTSYPEGVKGYK 677
Query: 775 VYDLKSNDIAISRNVVFHENMFPYPTQPSDLNQHQSCPLPQASFLSDEPFEYATQSPSEA 834
V+ L+ ISRNV+F E + + N L D + T
Sbjct: 678 VWVLEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGAT 737
Query: 835 LTQPNTSEP--SSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSKGTSYPL 892
N SE S +PVL++ P++ QD S AV S+ + +
Sbjct: 738 QDNSNPSEATTSHNPVLNS-----------PTHSQDEESEEEDSDAVEDLSTYQLVRDRV 786
Query: 893 SKVISYCNLAPAYH-------TFVMNITAVVEPKRYSEAVKHDSWRK---AMDQEIEALE 942
+ I P Y+ + EPK Y EA+ W K AM +E+ ++
Sbjct: 787 RRTIK---ANPKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMS 843
Query: 943 RNHTWILVDKPHDKTPIGCKWVYRIKYKQDGT-LDRYKARLVVKGYTQLEGIDFIDTFSP 1001
+NHTW LV KP IGC+WV+ K G R+ ARLV KG+TQ EG+D+ + FSP
Sbjct: 844 KNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSP 903
Query: 1002 VAKMTTLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEK-PNQVCLLQ 1060
V K ++R LL++ YN L Q+DV AFLH L+EEIYM+ P+G ++ N+VCLL+
Sbjct: 904 VVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLK 963
Query: 1061 KSLYGLKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGN 1120
+SLYGLKQ+ RQW + + + ++ S+ D +Y KK ++ LLLYVDD+L+
Sbjct: 964 RSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASA 1023
Query: 1121 DLHEIQLVKESLHAQFRIKDMGEAKFFLGLEIARSK-AGIV-LNQRKYALELLSDSGLLG 1178
+ E+ +K+ L +F +KD+G+AK LG+EI+R + AG++ L+Q Y ++L +
Sbjct: 1024 NKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDN 1083
Query: 1179 GKPTTTPMDSSQKFGLSTDTPLSD------ISSYRRLIGKLLY-LTTTRPDIAYVVNQLS 1231
KP +TP+ K +TD + I Y IG ++Y + TRPD+AY + +S
Sbjct: 1084 AKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVIS 1143
Query: 1232 QFLSAPTNVHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGY 1291
+F+S P H A VLRY++G L + L + DSD+ DTR+SITGY
Sbjct: 1144 RFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGY 1203
Query: 1292 CMFLGSSLISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYC 1351
+G + ISW+SK Q + SS EAEY A+ V E WL +L V ++
Sbjct: 1204 VFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAEL-GHSQDYVEVHS 1262
Query: 1352 DNQSAMHIAHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAP 1411
D+QSA+ +A N +HERTKHI++ H +R+ + GL+ ++ IA+ A+IFTK + A
Sbjct: 1263 DSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAK 1322
Query: 1412 FRHIFSKL 1419
F + L
Sbjct: 1323 FEGALNML 1330
>At1g37110
Length = 1356
Score = 531 bits (1369), Expect = e-151
Identities = 357/1074 (33%), Positives = 556/1074 (51%), Gaps = 67/1074 (6%)
Query: 370 WILDTGATDHICNTLSYFSSYKHVEPIPVSLPNGIVETTTIKGTIQITPSF----ILANV 425
WILD+G T H+ + +F S++ + L + + +GTI+I IL NV
Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILENV 367
Query: 426 LFLPNFEFNLISVHKLVKCLRYRLIFEDDLCLIQDSNACKMIGTVRAVKGLYIFNKSSIS 485
++P+ NLIS L K L YR + +N + G++ GLY+ + S++
Sbjct: 368 KYVPHLRRNLISTGTLDK-LGYRHEGGEGKVRYFKNNKTALRGSLS--NGLYVLDGSTVM 424
Query: 486 SLASCNSISTSVNPSVHSSSICTFQSNVHNLWHYRLGHPSL--VKGQSINELFPYVQCSK 543
S CN+ + V + LWH RLGH S+ +K + L + ++
Sbjct: 425 S-ELCNAETDKVKTA---------------LWHSRLGHMSMNNLKVLAGKGLIDRKEINE 468
Query: 544 AHVCDVCPVAKQKRMSFPLSVTQSTAIFQLIHVDIWGPVSIV-SLHGFSYFLTIVDDYSR 602
C+ C + K K++SF + S +H D+WG ++ S+ G YFL+I+DD +R
Sbjct: 469 LEFCEHCVMGKSKKVSFNVGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTR 528
Query: 603 FTWIYLLKS*AEVKNLVQEFCALVANQFETAVKTIRSDNGKEFSLPQFYA---TKGIVHQ 659
W+Y LKS E + E+ +LV NQ VK +R+DNG EF +F + GI
Sbjct: 529 KVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERH 588
Query: 660 TSCVETPQQNSIVERKHQHILNVARALLFQAHLPKIFWAHAIVHAVFLINRLPSPVLDGK 719
+C TPQQN + ER ++ I+ R LL ++ + ++FWA A A +LINR P+ ++
Sbjct: 589 RTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHN 648
Query: 720 CPFQILHKVLPDLTNLKVFGSLCFASTLVSHRTKFDPRAKRCVFLGFKPGTKGYIVYDLK 779
P ++ P +L+ FGS+ + + K PRA + FLG+ GTKGY V+ L+
Sbjct: 649 VPEEMWLNRKPGYKHLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVWLLE 705
Query: 780 SNDIAISRNVVFHENMFPYPTQPSD-----LNQHQ--SCPLPQASFL--SDEPFEYATQS 830
ISRNVVF E++ + + LNQ + S + Q F S QS
Sbjct: 706 EEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQS 765
Query: 831 PSEALTQPNTSEPSSDPVLDNNHRTSTRTRKQPSYLQDYHCSLIASTAVSSSSSSKGTSY 890
SE +T+ E SSD + + T+ + + L Y +A V + +
Sbjct: 766 DSEPITE---GEQSSDSEEEVEYSEKTQETPKRTGLTTYK---LARDRVRRNINPPTRFT 819
Query: 891 PLSKVISYCNLAPAYHTFVMNITAVVEPKRYSEAVKH---DSWRKAMDQEIEALERNHTW 947
S V + V+ V EP+ Y EA++ + W A E+++L +N TW
Sbjct: 820 EESSV--------TFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTW 871
Query: 948 ILVDKPHDKTPIGCKWVYRIKYKQDGTLD-RYKARLVVKGYTQLEGIDFIDTFSPVAKMT 1006
LVDKP D+ IGC+W++++K G R+KARLV KGYTQ EG+D+ + F+PV K
Sbjct: 872 DLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHV 931
Query: 1007 TLRVLLALASSYNWFLHQLDVDNAFLHAQLDEEIYMSLPQGLHTEKP-NQVCLLQKSLYG 1065
++R+L++L + L Q+DV FLH L+EE+YM P+G ++ N+VC L+KSLYG
Sbjct: 932 SIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYG 991
Query: 1066 LKQASRQWYTTLCKALHTLGFSPSSADHTLYIKKGTTGSFTALLLYVDDVLLTGNDLHEI 1125
LKQ+ RQW + + + F S D +Y+K + F LLLYVDD+L+ G EI
Sbjct: 992 LKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEI 1051
Query: 1126 QLVKESLHAQFRIKDMGEAKFFLGLEIARSKAGIVL--NQRKYALELLSDSGLLGGKPTT 1183
VKE L +F +KDMG A LG++I R + G VL +Q Y ++L + G K T
Sbjct: 1052 NRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTN 1111
Query: 1184 TPMDSSQKFGLSTDTPL---SDISSYRRLIGKLLY-LTTTRPDIAYVVNQLSQFLSAPTN 1239
P+ + K + +D+ Y +G ++Y + TRPD+AY + +S+++S P +
Sbjct: 1112 APVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGS 1171
Query: 1240 VHEAAAHRVLRYIKGNPGCGLFYPADSSTTLTAFSDSDWAGCLDTRKSITGYCMFLGSSL 1299
+H A V+RY+KG L + + T+T + DS++A LD R+SI+GY +G +
Sbjct: 1172 MHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNT 1231
Query: 1300 ISWRSKKQTTTSRSSCEAEYRAMAATVCEVQWLSYLLHDLQAPPSAPVSMYCDNQSAMHI 1359
+SW++ Q + S+ EAEY A+A E W+ LL D+ V ++CD+QSA+ +
Sbjct: 1232 VSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDM-GMQQDKVKIWCDSQSAICL 1290
Query: 1360 AHNPSYHERTKHIEVDCHIVREKVQQGLVHLLPIASSHQLADIFTKPLTPAPFR 1413
+ N YHERTKHI+V + +R+ V+ G V +L I +S D TK + F+
Sbjct: 1291 SKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFK 1344
Score = 31.6 bits (70), Expect = 3.4
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 225 RNSQSNYGGCQSSSGNNRYSSKKCSYCGKMGHTVEDCYKK 264
RN+Q G S N++ + C YC K GH +DCY +
Sbjct: 234 RNNQKGGQGKGRSRSNSK-TKVPCWYCKKEGHVKKDCYSR 272
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,725,084
Number of Sequences: 26719
Number of extensions: 1428096
Number of successful extensions: 5012
Number of sequences better than 10.0: 171
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 4010
Number of HSP's gapped (non-prelim): 424
length of query: 1428
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1316
effective length of database: 8,326,068
effective search space: 10957105488
effective search space used: 10957105488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0211.5