BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0211.14
         (280 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g05170 unknown protein                                             422  e-118
At1g08940 unknown protein                                             390  e-109
At4g38370 unknown protein                                              36  0.026
At5g22620 phosphoglycerate mutase like protein                         34  0.100
At1g22170 phosphoglycerate mutase like protein                         34  0.100
At3g60420 unknown protein                                              33  0.13
At5g55580 Unknown protein (At5g55580)                                  29  3.2
At3g16030 putative receptor kinase                                     28  4.2
At2g30960 hypothetical protein                                         28  7.2

>At3g05170 unknown protein
          Length = 316

 Score =  422 bits (1084), Expect = e-118
 Identities = 194/276 (70%), Positives = 232/276 (83%)

Query: 3   VLPKRIILMRHGESQGNLDTSAYTTTPDHSIQLTPQGISQARRAGNRLRRVMAADGCSPD 62
           +LPKRIIL+RHGES+GNLDT+AYTTTPDH IQLT  G+ QA+ AG RL  +++++  SP+
Sbjct: 7   LLPKRIILVRHGESEGNLDTAAYTTTPDHKIQLTDSGLLQAQEAGARLHALISSNPSSPE 66

Query: 63  WRVNFYVSPYARTRSTLREVGRSFSKKRVIGVREESRIREQDFGNFQVEERMKIIKQTRE 122
           WRV FYVSPY RTRSTLRE+GRSFS++RVIGVREE RIREQDFGNFQV+ERM+  K+ RE
Sbjct: 67  WRVYFYVSPYDRTRSTLREIGRSFSRRRVIGVREECRIREQDFGNFQVKERMRATKKVRE 126

Query: 123 RFGRFFYRFPEGESAADVYDRISGFFEALWRDIDLNRLHHDPSNDLNLVIVSHGLTSRIF 182
           RFGRFFYRFPEGESAADV+DR+S F E+LWRDID+NRLH +PS++LN VIVSHGLTSR+F
Sbjct: 127 RFGRFFYRFPEGESAADVFDRVSSFLESLWRDIDMNRLHINPSHELNFVIVSHGLTSRVF 186

Query: 183 LMKWFKWTVEQFEHLNNFGNCEFRVMEQGSGGEYSLAVHHTEEEMLQWGLSPEMVADQKW 242
           LMKWFKW+VEQFE LNN GN E RVME G GG+YSLA+HHTEEE+  WGLSPEM+ADQKW
Sbjct: 187 LMKWFKWSVEQFEGLNNPGNSEIRVMELGQGGDYSLAIHHTEEELATWGLSPEMIADQKW 246

Query: 243 RAGASRGAWNDQCSWYLDGFFDRLAEESDDEEASSS 278
           RA A +G W + C WY   FFD +A+   + E  ++
Sbjct: 247 RANAHKGEWKEDCKWYFGDFFDHMADSDKECETEAT 282


>At1g08940 unknown protein
          Length = 281

 Score =  390 bits (1003), Expect = e-109
 Identities = 186/276 (67%), Positives = 224/276 (80%), Gaps = 5/276 (1%)

Query: 3   VLPKRIILMRHGESQGNLDTSAYTTTPDHSIQLTPQGISQARRAGNRLRRVMAADG---C 59
           +LPKRIILMRHGES GN+D  AY TTPDH I LT +G +QAR AG ++R +++      C
Sbjct: 7   MLPKRIILMRHGESAGNIDAGAYATTPDHKIPLTEEGRAQAREAGKKMRALISTQSGGAC 66

Query: 60  SPDWRVNFYVSPYARTRSTLREVGRSFSKKRVIGVREESRIREQDFGNFQVEERMKIIKQ 119
             +WRV FYVSPY RTR+TLREVG+ FS+KRVIGVREE RIREQDFGNFQVEERM+++K+
Sbjct: 67  GENWRVYFYVSPYERTRTTLREVGKGFSRKRVIGVREECRIREQDFGNFQVEERMRVVKE 126

Query: 120 TRERFGRFFYRFPEGESAADVYDRISGFFEALWRDIDLNRLHHDPSNDLNLVIVSHGLTS 179
           TRERFGRFFYRFPEGESAADVYDR+S F E++WRD+D+NR   DPS++LNLVIVSHGLTS
Sbjct: 127 TRERFGRFFYRFPEGESAADVYDRVSSFLESMWRDVDMNRHQVDPSSELNLVIVSHGLTS 186

Query: 180 RIFLMKWFKWTVEQFEHLNNFGNCEFRVMEQGSGGEYSLAVHHTEEEMLQWGLSPEMVAD 239
           R+FL KWFKWTV +FE LNNFGNCEFRVME G+ GEY+ A+HH+EEEML WG+S +M+ D
Sbjct: 187 RVFLTKWFKWTVAEFERLNNFGNCEFRVMELGASGEYTFAIHHSEEEMLDWGMSKDMIDD 246

Query: 240 QKWRAGASR-GAWNDQCSWYLDGFFDRLAEESDDEE 274
           QK R    R    ND CS +L+ +FD L + +DDEE
Sbjct: 247 QKDRVDGCRVTTSNDSCSLHLNEYFD-LLDVTDDEE 281


>At4g38370 unknown protein
          Length = 225

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 7  RIILMRHGESQGN---LDTSAYTTTPDHSIQLTPQGISQARRAGNRLRRVMAADGCSPDW 63
          R  ++RHG+S  N   L  S+         QL P G++QAR AG    + +       D 
Sbjct: 11 RYWVLRHGKSIPNERGLVVSSMENGVLPEYQLAPDGVAQARLAGESFLQQLKESNIELD- 69

Query: 64 RVNFYVSPYARTRSTLREVGR 84
          +V    SP++RT  T R V +
Sbjct: 70 KVRICYSPFSRTTHTARVVAK 90


>At5g22620 phosphoglycerate mutase like protein
          Length = 482

 Score = 33.9 bits (76), Expect = 0.100
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 19/128 (14%)

Query: 6   KRIILMRHGESQGNLDTSAYTTTPDHSIQLTPQGISQARRAGNRLRRVMAADGCSPDWRV 65
           KR++L+RHG+S  N +      + D S+ LT +G SQA      + R M  D    D   
Sbjct: 48  KRVVLVRHGQSTWN-EEGRIQGSSDFSV-LTKKGESQA-----EISRQMLID----DSFD 96

Query: 66  NFYVSPYARTRSTLREVGRSFSKKRVIGVREESRIREQDFGNFQVEERMKIIKQTRERFG 125
             + SP  R++ T   +  S   + +     +  +RE D  +FQ      + K+ +E+FG
Sbjct: 97  VCFTSPLKRSKKTAEIIWGSRESEMIF----DYDLREIDLYSFQ----GLLKKEGKEKFG 148

Query: 126 RFFYRFPE 133
             F ++ E
Sbjct: 149 EAFKQWQE 156


>At1g22170 phosphoglycerate mutase like protein
          Length = 334

 Score = 33.9 bits (76), Expect = 0.100
 Identities = 46/212 (21%), Positives = 87/212 (40%), Gaps = 41/212 (19%)

Query: 8   IILMRHGESQGNLDTSAYTTTPDHSIQLTPQGISQARRAGNRLRRV-------------- 53
           +IL+RHGES  N + + +T   D  + LT +G+ +A  AG R+  +              
Sbjct: 80  LILIRHGESLWN-EKNLFTGCVD--VPLTEKGVEEAIEAGKRISNIPVDVIFTSSLIRAQ 136

Query: 54  ---MAADGCSPDWRVNFYVSPYARTRSTLREVGRSFSKKRVIGVREESRIREQDFGNFQV 110
              M A       +V   +   +    T  +V    +K + I V    ++ E+ +G  Q 
Sbjct: 137 MTAMLAMIQHRRKKVPIILHDESEQAKTWSQVFSDETKNQSIPVIPAWQLNERMYGELQG 196

Query: 111 EERMKIIKQTRERFGR---------FFYRFPEGESAADVYDRISGFFEALWRDIDLNRLH 161
             +    ++T ER+G+         +    P+GES     +R   +F+        + + 
Sbjct: 197 LNK----QETAERYGKEQVHEWRRSYDIPPPKGESLEMCAERAVAYFQ--------DNIE 244

Query: 162 HDPSNDLNLVIVSHGLTSRIFLMKWFKWTVEQ 193
              +   N++I +HG + R  +M   K T ++
Sbjct: 245 PKLAAGKNVMIAAHGNSLRSIIMYLDKLTCQE 276


>At3g60420 unknown protein
          Length = 270

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 24/153 (15%)

Query: 6   KRIILMRHGESQGNLDTS-AYTTTPDHSIQLTPQGISQARRAGNRLRRVMAADGCSPDWR 64
           + +ILMRHG+   N +     T        L   G  +A R G R+R  +      P  R
Sbjct: 12  QNVILMRHGDRLDNFEPLWTSTAARPWDPPLAQDGKDRAFRTGQRIRSQLGV----PIHR 67

Query: 65  VNFYVSPYARTRSTLREVGR----------SFSKKRVIGVREESRIREQDFGNFQVEERM 114
           V  +VSP+ R   T  EV            + S K V+ +         +FG  ++   +
Sbjct: 68  V--FVSPFLRCIQTASEVVAALSAVDFDPIAMSSKDVLSIDNTKIKVAIEFGLSEIPHPI 125

Query: 115 KIIKQTRERFGRFFYR-------FPEGESAADV 140
            I  +   + G+F ++       FPEG   ++V
Sbjct: 126 FIKSEVAPKDGKFDFKISDLEAMFPEGTVDSNV 158


>At5g55580 Unknown protein (At5g55580)
          Length = 496

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/49 (30%), Positives = 25/49 (50%)

Query: 223 TEEEMLQWGLSPEMVADQKWRAGASRGAWNDQCSWYLDGFFDRLAEESD 271
           T+E+ L  G+SP   +++K  +    G        Y++  + RLAEE D
Sbjct: 131 TDEDDLDLGISPNATSEKKKESWRLDGRGKMSSRKYVEKLYPRLAEEID 179


>At3g16030 putative receptor kinase
          Length = 850

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 29/128 (22%), Positives = 49/128 (37%), Gaps = 23/128 (17%)

Query: 62  DWRVNFYVSP-------YARTRSTLREVGRSFSKKRVIGVREESRIREQDFGNFQVEERM 114
           DW++ F +         Y    S L+ + R      ++ + E+   +  DFG  ++    
Sbjct: 622 DWKLRFRIMEGIIQGLLYLHKYSRLKVIHRDIKAGNIL-LDEDMNPKISDFGMARIFGAQ 680

Query: 115 KIIKQTRERFGRFFYRFPEG------ESAADVYDRISGFFEALWRDIDLNR----LHHDP 164
           +    T+   G F Y  PE        + +DV+      F  L  +I   R     HHD 
Sbjct: 681 ESKANTKRVAGTFGYMSPEYFREGLFSAKSDVFS-----FGVLMLEIICGRKNNSFHHDS 735

Query: 165 SNDLNLVI 172
              LNL++
Sbjct: 736 EGPLNLIV 743


>At2g30960 hypothetical protein
          Length = 260

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 88  KKRVIGVREESRIREQDFGNFQVEERMKIIKQTRERFGR 126
           ++R +   EE +I E+D    + E+RM   +  R+ FGR
Sbjct: 47  RRRKLQAEEEKKIEEEDLKKAEEEKRMN--RSNRKHFGR 83


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.321    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,704,212
Number of Sequences: 26719
Number of extensions: 285663
Number of successful extensions: 647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 642
Number of HSP's gapped (non-prelim): 9
length of query: 280
length of database: 11,318,596
effective HSP length: 98
effective length of query: 182
effective length of database: 8,700,134
effective search space: 1583424388
effective search space used: 1583424388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)