BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0206b.2
         (121 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g42910 putative ribose phosphate pyrophosphokinase                  77  1e-15
At1g10700 putative phosphoribosyl diphosphate synthase                 75  7e-15
At2g37280 putative ABC transporter                                     26  2.8
At3g04240 O-linked GlcNAc transferase like protein                     25  4.7
At3g56630 cytochrome P450-like protein                                 25  6.1
At1g48270 putative G-protein-coupled receptor (GCR1)                   25  8.0
At1g11180 secretory carrier membrane protein, putative                 25  8.0

>At2g42910 putative ribose phosphate pyrophosphokinase
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-15
 Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 1/62 (1%)

Query: 61  FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE-*KEEGDVTTAFTLARML 119
           FLA  SSP   FEQ + IY L  LFVASF LV PFFPTGSFE  +EEGDV TAFT+AR++
Sbjct: 82  FLASFSSPAVIFEQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIV 141

Query: 120 SN 121
           SN
Sbjct: 142 SN 143


>At1g10700 putative phosphoribosyl diphosphate synthase
          Length = 411

 Score = 74.7 bits (182), Expect = 7e-15
 Identities = 42/62 (67%), Positives = 46/62 (73%), Gaps = 1/62 (1%)

Query: 61  FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTGSFE*KE-EGDVTTAFTLARML 119
           FLA  SSP   FEQ + IYAL  LFV+SF LV PFFPTG+ E  E EGDV TAFTLAR+L
Sbjct: 155 FLASFSSPAVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARIL 214

Query: 120 SN 121
           SN
Sbjct: 215 SN 216


>At2g37280 putative ABC transporter
          Length = 1413

 Score = 26.2 bits (56), Expect = 2.8
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 54  VVW*TCC---FLAQLSSPTQGFEQFTAIYALHCLFVASFALVPPFFPTG 99
           +VW TC     +     P + F QF  ++A+H   ++ F  +   F TG
Sbjct: 603 LVW-TCLTYYVIGYTPEPYRFFRQFMILFAVHFTSISMFRCIAAIFQTG 650


>At3g04240 O-linked GlcNAc transferase like protein
          Length = 977

 Score = 25.4 bits (54), Expect = 4.7
 Identities = 12/29 (41%), Positives = 14/29 (47%)

Query: 79  YALHCLFVASFALVPPFFPTGSFE*KEEG 107
           YA HC  +AS   +PPF        K EG
Sbjct: 559 YAAHCSIIASRFGLPPFTHPAGLPVKREG 587


>At3g56630 cytochrome P450-like protein
          Length = 499

 Score = 25.0 bits (53), Expect = 6.1
 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 12/62 (19%)

Query: 71  GFEQFTAIYALHCLFVASFALVPP------------FFPTGSFE*KEEGDVTTAFTLARM 118
           GFE    +  LH     S  L PP              P G+F  K+ G    A+ + RM
Sbjct: 344 GFEDLKLMNYLHAAITESLRLYPPVPVDTMSCAEDNVLPDGTFIGKDWGISYNAYAMGRM 403

Query: 119 LS 120
            S
Sbjct: 404 ES 405


>At1g48270 putative G-protein-coupled receptor (GCR1)
          Length = 326

 Score = 24.6 bits (52), Expect = 8.0
 Identities = 11/31 (35%), Positives = 15/31 (47%)

Query: 59 CCFLAQLSSPTQGFEQFTAIYALHCLFVASF 89
          C F   +  P++GF  +   Y  H   VASF
Sbjct: 65 CSFFLIVGDPSKGFICYAQGYTTHFFCVASF 95


>At1g11180 secretory carrier membrane protein, putative
          Length = 291

 Score = 24.6 bits (52), Expect = 8.0
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 54  VVW*TCCFLAQLSSPTQGFEQFTAIYALHCLFVASFALVPP 94
           V+W    + A  S     F  F   Y LH LF    A+ PP
Sbjct: 176 VLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPP 216


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.370    0.164    0.657 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,188,077
Number of Sequences: 26719
Number of extensions: 66324
Number of successful extensions: 294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 7
length of query: 121
length of database: 11,318,596
effective HSP length: 97
effective length of query: 24
effective length of database: 8,726,853
effective search space: 209444472
effective search space used: 209444472
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.8 bits)
S2: 52 (24.6 bits)