BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0195b.8
(83 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g02040 histidine transport protein (PTR2-B) 104 7e-24
At1g62200 unknown protein (At1g62200) 96 4e-21
At2g02020 putative peptide/amino acid transporter 84 1e-17
At1g32450 peptide transporter PTR2-B, putative 80 2e-16
At3g54140 peptide transport - like protein 76 3e-15
At2g26690 putative nitrate transporter 75 8e-15
At3g21670 nitrate transporter 74 1e-14
At5g01180 oligopeptide transporter - like protein 74 2e-14
At5g19640 peptide transport protein-like 73 2e-14
At3g54450 oligopeptide transporter -like protein 72 5e-14
At1g12110 nitrate/chlorate transporter CHL1 72 5e-14
At1g59740 nitrate transporter NTL1, putative 69 4e-13
At4g21680 peptide transporter - like protein 66 3e-12
At2g37900 putative peptide/amino acid transporter 66 3e-12
At1g33440 nitrate transporter NTL1, putative 62 4e-11
At3g53960 transporter like protein 61 1e-10
At2g38100 putative peptide/amino acid transporter 59 6e-10
At5g11570 putative oligopeptide transporter protein 56 3e-09
At5g46050 peptide transporter 56 4e-09
At1g27080 nitrite transporter, putative 56 4e-09
>At2g02040 histidine transport protein (PTR2-B)
Length = 585
Score = 104 bits (260), Expect = 7e-24
Identities = 48/74 (64%), Positives = 61/74 (81%)
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTM 67
++S+ ES+SGDY+N WRL TVTQVEELKILIR+ PIWA+ I+FSAVYA +ST+ V+QG
Sbjct: 318 VISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRA 377
Query: 68 MNRSFGSFNIPPAS 81
MN GSF +PPA+
Sbjct: 378 MNCKIGSFQLPPAA 391
>At1g62200 unknown protein (At1g62200)
Length = 590
Score = 95.5 bits (236), Expect = 4e-21
Identities = 44/74 (59%), Positives = 59/74 (79%)
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTM 67
++S+ ES+SG ++NPW+L TVTQVEE+K LIR+ PIWA+ IV+S +Y+ +STL V+QG
Sbjct: 332 VISEYESKSGAFSNPWKLCTVTQVEEVKTLIRMFPIWASGIVYSVLYSQISTLFVQQGRS 391
Query: 68 MNRSFGSFNIPPAS 81
MNR SF IPPAS
Sbjct: 392 MNRIIRSFEIPPAS 405
>At2g02020 putative peptide/amino acid transporter
Length = 545
Score = 84.3 bits (207), Expect = 1e-17
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 3 EENIDLVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLV 62
+ N+ + DS NPW+L TVTQVEE+KIL+R++PIWA+ I+FS +++ + TL V
Sbjct: 277 KSNLKVPEDSTDEGDANTNPWKLCTVTQVEEVKILLRLVPIWASGIIFSVLHSQIYTLFV 336
Query: 63 EQGTMMNRSFGSFNIPPAS 81
+QG M R+ G F IPPA+
Sbjct: 337 QQGRCMKRTIGLFEIPPAT 355
>At1g32450 peptide transporter PTR2-B, putative
Length = 606
Score = 79.7 bits (195), Expect = 2e-16
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 11 DSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNR 70
D + + D NPWRL VTQVEE+K ++R++PIW I++S V+ +++L VEQG MN
Sbjct: 316 DLDDKKQDSVNPWRLCPVTQVEEVKCILRLMPIWLCTIIYSVVFTQMASLFVEQGAAMNT 375
Query: 71 SFGSFNIPPAS 81
S F IPPAS
Sbjct: 376 SVSDFKIPPAS 386
>At3g54140 peptide transport - like protein
Length = 570
Score = 76.3 bits (186), Expect = 3e-15
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 10 SDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMN 69
S S+S NPWRL +VTQVEELK +I +LP+WAT IVF+ VY+ +ST+ V QG M+
Sbjct: 302 SQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMD 361
Query: 70 RSFG-SFNIPPAS 81
+ G +F IP AS
Sbjct: 362 QHMGKNFEIPSAS 374
>At2g26690 putative nitrate transporter
Length = 586
Score = 74.7 bits (182), Expect = 8e-15
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIPPA 80
NPW+L +VT+VEE+K+++R+LPIWAT I+F YA + T VEQ + M R+ GSF IP
Sbjct: 322 NPWKLSSVTKVEEVKMMVRLLPIWATTIIFWTTYAQMITFSVEQASTMRRNIGSFKIPAG 381
Query: 81 S 81
S
Sbjct: 382 S 382
>At3g21670 nitrate transporter
Length = 590
Score = 74.3 bits (181), Expect = 1e-14
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 10 SDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMN 69
S S+ + +PW + TVTQVEE+K++++++PIWAT I+F +Y+ ++T VEQ T M+
Sbjct: 308 SSPSSKDFEEKDPWIVSTVTQVEEVKLVMKLVPIWATNILFWTIYSQMTTFTVEQATFMD 367
Query: 70 RSFGSFNIPPAS 81
R GSF +P S
Sbjct: 368 RKLGSFTVPAGS 379
>At5g01180 oligopeptide transporter - like protein
Length = 570
Score = 73.6 bits (179), Expect = 2e-14
Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 10 SDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMN 69
++S+++ ++ W+L TVTQVEELK LIR+LPIWAT IVF++VY+ + T+ V QG ++
Sbjct: 302 TESDNKGAAKSSSWKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLD 361
Query: 70 RSFG-SFNIPPAS 81
+ G +F IP AS
Sbjct: 362 QHMGPNFKIPSAS 374
>At5g19640 peptide transport protein-like
Length = 609
Score = 73.2 bits (178), Expect = 2e-14
Identities = 33/73 (45%), Positives = 49/73 (66%)
Query: 9 VSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMM 68
V R+G +N WRL +VTQVEE K ++++LPIW I++S ++ +++L VEQG +M
Sbjct: 334 VITENDRNGTRSNAWRLCSVTQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVM 393
Query: 69 NRSFGSFNIPPAS 81
N G F+IP AS
Sbjct: 394 NAYVGKFHIPAAS 406
>At3g54450 oligopeptide transporter -like protein
Length = 488
Score = 72.0 bits (175), Expect = 5e-14
Identities = 35/77 (45%), Positives = 55/77 (70%), Gaps = 6/77 (7%)
Query: 6 IDLVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQG 65
ID + +++R NPWRL TV QVEE+K+++R++PIW + I+F A L+T ++QG
Sbjct: 214 IDEIDHNKNR-----NPWRLCTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFLKQG 268
Query: 66 TMMNRSFGS-FNIPPAS 81
+MM+R+ G+ F IPPA+
Sbjct: 269 SMMDRTIGNHFTIPPAA 285
>At1g12110 nitrate/chlorate transporter CHL1
Length = 590
Score = 72.0 bits (175), Expect = 5e-14
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSFNIPPA 80
N W L T+T VEE+K ++R+LPIWAT I+F V+A L+TL V Q ++RS GSF IPPA
Sbjct: 323 NKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIGSFEIPPA 382
Query: 81 S 81
S
Sbjct: 383 S 383
>At1g59740 nitrate transporter NTL1, putative
Length = 591
Score = 68.9 bits (167), Expect = 4e-13
Identities = 35/64 (54%), Positives = 48/64 (74%), Gaps = 1/64 (1%)
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMN-RSFGSFNIPP 79
+PWRL TVTQVE++K LI ++PI+A+ IVF+ + A L T V+QG+ MN R SF+IPP
Sbjct: 331 SPWRLCTVTQVEQVKTLISLVPIFASTIVFNTILAQLQTFSVQQGSSMNTRLSNSFHIPP 390
Query: 80 ASCE 83
AS +
Sbjct: 391 ASLQ 394
>At4g21680 peptide transporter - like protein
Length = 589
Score = 66.2 bits (160), Expect = 3e-12
Identities = 30/66 (45%), Positives = 45/66 (67%)
Query: 16 SGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFGSF 75
SG +PWRL +VTQVEE+K ++R+LPIW I++S V+ +++L V QG M + +F
Sbjct: 316 SGSKYDPWRLCSVTQVEEVKCVLRLLPIWLCTILYSVVFTQMASLFVVQGAAMKTNIKNF 375
Query: 76 NIPPAS 81
IP +S
Sbjct: 376 RIPASS 381
>At2g37900 putative peptide/amino acid transporter
Length = 575
Score = 66.2 bits (160), Expect = 3e-12
Identities = 28/74 (37%), Positives = 44/74 (58%)
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTM 67
++ D + + +PWRL T+T+VEE K++I V+PIW + + F ST ++Q
Sbjct: 311 IIEDKNPLALEKQSPWRLLTLTKVEETKLIINVIPIWFSTLAFGICATQASTFFIKQAIT 370
Query: 68 MNRSFGSFNIPPAS 81
M+R G F +PPAS
Sbjct: 371 MDRHIGGFTVPPAS 384
>At1g33440 nitrate transporter NTL1, putative
Length = 596
Score = 62.4 bits (150), Expect = 4e-11
Identities = 30/64 (46%), Positives = 44/64 (67%), Gaps = 1/64 (1%)
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSF-GSFNIPP 79
+PWRL T+ QV ++KIL+ V+PI+A I+F+ + A L T V+QG+ MN +F IPP
Sbjct: 317 SPWRLCTIEQVHQVKILLSVIPIFACTIIFNTILAQLQTFSVQQGSSMNTHITKTFQIPP 376
Query: 80 ASCE 83
AS +
Sbjct: 377 ASLQ 380
>At3g53960 transporter like protein
Length = 620
Score = 60.8 bits (146), Expect = 1e-10
Identities = 30/72 (41%), Positives = 45/72 (61%), Gaps = 2/72 (2%)
Query: 12 SESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRS 71
+E+ + +PWRL TVT+VEE+K+LI ++PIW + F STL ++Q +M+R
Sbjct: 315 NENTKAEKQSPWRLATVTKVEEVKLLINMIPIWFFTLAFGVCATQSSTLFIKQAIIMDRH 374
Query: 72 F--GSFNIPPAS 81
SF +PPAS
Sbjct: 375 ITGTSFIVPPAS 386
>At2g38100 putative peptide/amino acid transporter
Length = 521
Score = 58.5 bits (140), Expect = 6e-10
Identities = 26/71 (36%), Positives = 45/71 (62%)
Query: 8 LVSDSESRSGDYANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTM 67
++ +ES N W+L VT+VE+ K +IR +P++AT ++ V++L +T +EQ
Sbjct: 246 MILQTESLEQQRKNRWKLCRVTEVEQTKSVIRTVPLFATSLISGIVFSLGNTFFLEQANH 305
Query: 68 MNRSFGSFNIP 78
M+ FGS+N+P
Sbjct: 306 MDSKFGSWNLP 316
>At5g11570 putative oligopeptide transporter protein
Length = 481
Score = 56.2 bits (134), Expect = 3e-09
Identities = 30/63 (47%), Positives = 38/63 (59%), Gaps = 2/63 (3%)
Query: 21 NPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRS--FGSFNIP 78
NPW+L V QVE+LK LI V+PIW+T I+ S V A + +V Q M+R F IP
Sbjct: 237 NPWKLCRVQQVEDLKSLINVIPIWSTGIILSLVTACQVSFIVLQAKTMDRHTFIQGFEIP 296
Query: 79 PAS 81
P S
Sbjct: 297 PGS 299
>At5g46050 peptide transporter
Length = 582
Score = 55.8 bits (133), Expect = 4e-09
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 23 WRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSF-GSFNIPPAS 81
W L T T+VEE K ++R+LP+ V S + A ++TL V+QGT ++R GSF+IPPAS
Sbjct: 315 WNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPAS 374
>At1g27080 nitrite transporter, putative
Length = 534
Score = 55.8 bits (133), Expect = 4e-09
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 20 ANPWRLFTVTQVEELKILIRVLPIWATEIVFSAVYALLSTLLVEQGTMMNRSFG-SFNIP 78
AN WRL ++ +VEE+K LIRV+P+W+ I+ +T +V Q T M+R G F IP
Sbjct: 264 ANKWRLCSIQEVEEVKCLIRVVPVWSAGIISIVAMTTQATFMVFQATKMDRHMGPHFEIP 323
Query: 79 PAS 81
AS
Sbjct: 324 AAS 326
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,716,195
Number of Sequences: 26719
Number of extensions: 51025
Number of successful extensions: 182
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 122
Number of HSP's gapped (non-prelim): 60
length of query: 83
length of database: 11,318,596
effective HSP length: 59
effective length of query: 24
effective length of database: 9,742,175
effective search space: 233812200
effective search space used: 233812200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0195b.8