BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0195a.7
         (69 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g07880 putative RHO GDP-dissociation inhibitor 1                   114  1e-26
At1g62450 hypothetical protein similar to F24O1.19                    109  2e-25
At1g12070 putative GDP-dissociation inhibitor                         100  1e-22
At3g17920 unknown protein                                              28  0.64
At3g27410 predicted GPI-anchored protein                               27  2.4
At2g23530 hypothetical protein                                         27  2.4
At3g54720 peptidase like protein                                       26  3.2
At1g65580 hypothetical protein                                         26  3.2
At3g05330 unknown protein                                              25  7.1

>At3g07880 putative RHO GDP-dissociation inhibitor 1
          Length = 240

 Score =  114 bits (284), Expect = 1e-26
 Identities = 49/66 (74%), Positives = 60/66 (90%)

Query: 4   VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
           V VD +KEM+GTFSPQ +PY H MP+ETTPSG+FAR +YSAR+KF+DDDNKCYLEI+Y+F
Sbjct: 172 VKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSF 231

Query: 64  DIRKDW 69
           DIRK+W
Sbjct: 232 DIRKEW 237


>At1g62450 hypothetical protein similar to F24O1.19
          Length = 236

 Score =  109 bits (273), Expect = 2e-25
 Identities = 48/66 (72%), Positives = 57/66 (85%)

Query: 4   VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
           V VDS+K M+GTFSPQ + Y H MP+E TPSG+FAR +YSAR+KF+DDDNKCYLEI+YTF
Sbjct: 170 VKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTF 229

Query: 64  DIRKDW 69
           DIRK W
Sbjct: 230 DIRKSW 235


>At1g12070 putative GDP-dissociation inhibitor
          Length = 223

 Score =  100 bits (249), Expect = 1e-22
 Identities = 44/66 (66%), Positives = 54/66 (81%)

Query: 4   VTVDSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEIDYTF 63
           + V S KEM+GTFSPQ +PYTH M +ET PSG+  R +YS +SKFVDDDN+CYLE +YTF
Sbjct: 157 IKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLVRGSYSVKSKFVDDDNQCYLENNYTF 216

Query: 64  DIRKDW 69
           DIRK+W
Sbjct: 217 DIRKNW 222


>At3g17920 unknown protein
          Length = 962

 Score = 28.5 bits (62), Expect = 0.64
 Identities = 10/23 (43%), Positives = 18/23 (77%)

Query: 1   GHFVTVDSSKEMIGTFSPQTDPY 23
           G+  T+D+S++M G+FSP + P+
Sbjct: 500 GNMSTLDASQDMTGSFSPSSPPH 522


>At3g27410 predicted GPI-anchored protein
          Length = 132

 Score = 26.6 bits (57), Expect = 2.4
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 5  TVDSS-KEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
          TVD+S K +I +  P  D   +E+P E  P G+     Y+  S     D     E D
Sbjct: 43 TVDNSTKSLIDSLGPSQDYPDYEIPLELAPDGVVVVGDYAPISPRGTPDTLAQSEAD 99


>At2g23530 hypothetical protein
          Length = 555

 Score = 26.6 bits (57), Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (58%)

Query: 29  DETTPSGIFARRAYSARSKFVDDDNKCYLEID 60
           D+TTPS   A+R+ S + K   D++   LE D
Sbjct: 265 DDTTPSQASAKRSLSFQEKIAGDEDVPMLEND 296


>At3g54720 peptidase like protein
          Length = 705

 Score = 26.2 bits (56), Expect = 3.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 23 YTHEMPDETTPSGIFARRAYSA 44
          YT   PD  TP  +F+R AY+A
Sbjct: 40 YTLHHPDAVTPPLLFSRNAYNA 61


>At1g65580 hypothetical protein
          Length = 993

 Score = 26.2 bits (56), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 7  DSSKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDNK 54
          D + ++   FSP             TPS +F R AYS+ S   DD+++
Sbjct: 7  DQNDDVFSFFSPSFSA--------ATPSTLFNRSAYSSSSSSGDDESQ 46


>At3g05330 unknown protein
          Length = 444

 Score = 25.0 bits (53), Expect = 7.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 9   SKEMIGTFSPQTDPYTHEMPDETTPSGIFARRAYSARSKFVDDDN 53
           S+E  G  +P+T   + E   ET  S I ARR    +++  + D+
Sbjct: 145 SQEDDGPKTPETQQKSREQNPETVSSNIKARRKKEKQNRRSESDS 189


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,732,816
Number of Sequences: 26719
Number of extensions: 62168
Number of successful extensions: 142
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 9
length of query: 69
length of database: 11,318,596
effective HSP length: 45
effective length of query: 24
effective length of database: 10,116,241
effective search space: 242789784
effective search space used: 242789784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)