BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0192.12
(60 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31570 putative glutathione peroxidase 89 5e-19
At1g63460 glutathione peroxidase like protein 89 5e-19
At4g11600 phospholipid hydroperoxide glutathione peroxidase 88 7e-19
At4g31870 glutathione peroxidase - like protein 88 9e-19
At2g25080 putative glutathione peroxidase 87 2e-18
At3g63080 glutathione peroxidase -like protein 82 5e-17
At2g48150 glutathione peroxidase like protein 78 9e-16
At2g43350 putative glutathione peroxidase 75 6e-15
>At2g31570 putative glutathione peroxidase
Length = 169
Score = 88.6 bits (218), Expect = 5e-19
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G T++NY EL+ LYEKYK +GLEILAF CNQF QEPG++E+IQ+ V TRFK EFP+FDK
Sbjct: 42 GLTDANYKELNVLYEKYKEQGLEILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDK 101
>At1g63460 glutathione peroxidase like protein
Length = 167
Score = 88.6 bits (218), Expect = 5e-19
Identities = 41/60 (68%), Positives = 49/60 (81%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G TNSNYTEL+ LY +YK KGLEILAF CNQF +EPG ++QI +FV TRFK EFP+F+K
Sbjct: 42 GMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNK 101
>At4g11600 phospholipid hydroperoxide glutathione peroxidase
Length = 232
Score = 88.2 bits (217), Expect = 7e-19
Identities = 41/60 (68%), Positives = 47/60 (78%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G TNSNYTEL+ LYEKYK G EILAF CNQF QEPG +E+I +F TRFK E+P+FDK
Sbjct: 106 GLTNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDK 165
>At4g31870 glutathione peroxidase - like protein
Length = 230
Score = 87.8 bits (216), Expect = 9e-19
Identities = 40/60 (66%), Positives = 48/60 (79%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G T+SNY+ELS LYEKYK +G EILAF CNQF QEPG + +I++F TRFK EFP+FDK
Sbjct: 109 GLTSSNYSELSQLYEKYKNQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDK 168
>At2g25080 putative glutathione peroxidase
Length = 236
Score = 87.0 bits (214), Expect = 2e-18
Identities = 40/60 (66%), Positives = 48/60 (79%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G T+SNY+ELS LYEKYK +G EILAF CNQF QEPG + +I++F TRFK EFP+FDK
Sbjct: 112 GLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDK 171
>At3g63080 glutathione peroxidase -like protein
Length = 173
Score = 82.0 bits (201), Expect = 5e-17
Identities = 37/60 (61%), Positives = 45/60 (74%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
GFT SNYT+L+ LY KYK +G +LAF CNQF +QEPG SE+ +F TRFK E+PVF K
Sbjct: 47 GFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQK 106
>At2g48150 glutathione peroxidase like protein
Length = 170
Score = 77.8 bits (190), Expect = 9e-16
Identities = 36/60 (60%), Positives = 43/60 (71%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
GFT +NYT+L+ LY KYK + EILAF CNQF QEPG S++ EF RFK E+PVF K
Sbjct: 45 GFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQK 104
>At2g43350 putative glutathione peroxidase
Length = 206
Score = 75.1 bits (183), Expect = 6e-15
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 1 GFTNSNYTELSPLYEKYK*KGLEILAFSCNQFRAQEPGDSEQIQEFV*TRFKIEFPVFDK 60
G T+ NY E++ LY KYK +G EILAF CNQF +QEPG + +I+E V FK EFP+FDK
Sbjct: 81 GLTHGNYKEMNILYAKYKTQGFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDK 140
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.337 0.151 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,191,621
Number of Sequences: 26719
Number of extensions: 32785
Number of successful extensions: 94
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 8
length of query: 60
length of database: 11,318,596
effective HSP length: 36
effective length of query: 24
effective length of database: 10,356,712
effective search space: 248561088
effective search space used: 248561088
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0192.12