BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0191.8
(1758 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45230 putative non-LTR retroelement reverse transcriptase 804 0.0
At2g01840 putative non-LTR retroelement reverse transcriptase 768 0.0
At2g25550 putative non-LTR retroelement reverse transcriptase 751 0.0
At2g31520 putative non-LTR retroelement reverse transcriptase 732 0.0
At2g17910 putative non-LTR retroelement reverse transcriptase 731 0.0
At1g47910 reverse transcriptase, putative 676 0.0
At3g31420 hypothetical protein 670 0.0
At4g09710 RNA-directed DNA polymerase -like protein 655 0.0
At1g24640 hypothetical protein 648 0.0
At2g16680 putative non-LTR retroelement reverse transcriptase 632 0.0
At2g05200 putative non-LTR retroelement reverse transcriptase 632 0.0
At4g10830 putative protein 613 e-175
At3g32110 non-LTR reverse transcriptase, putative 588 e-168
At2g41580 putative non-LTR retroelement reverse transcriptase 587 e-167
At2g31080 putative non-LTR retroelement reverse transcriptase 547 e-155
At3g45550 putative protein 546 e-155
At2g11240 pseudogene 517 e-146
At4g15590 reverse transcriptase like protein 462 e-130
At2g17610 putative non-LTR retroelement reverse transcriptase 449 e-126
At1g25430 hypothetical protein 385 e-106
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 804 bits (2076), Expect = 0.0
Identities = 465/1384 (33%), Positives = 723/1384 (51%), Gaps = 57/1384 (4%)
Query: 397 MKTISWNCRGVGSPRTVKVLQRIIKAEDPDIVFLMETHKKNGELKNIVARLGFKNHLGVE 456
M+ +SWNC+GVG+ TV+ L+ I P+++FL ET K+ L+N+V LGF + VE
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60
Query: 457 CRGEGRSSGGGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGFYGYPESQNKIK 516
G+ GGLAL+WK+ I ++ I A D+ +LT YG P + +
Sbjct: 61 PIGKS----GGLALMWKDSVQIKVLQSDKRLIDALLIWQDK-EFYLTCIYGEPVQAERGE 115
Query: 517 SWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQ 576
W+ L RL SGPWM GDFNE+ +EK GG R +F + LN CGL ++
Sbjct: 116 LWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHS 175
Query: 577 GDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLITVTSQPI 636
G F+W R DE +Q RLDR V +Q++ E++P + +L + SDH+PL+ +
Sbjct: 176 GYQFSWYGNRNDEL-VQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGD-- 232
Query: 637 EEGKKKKKKLFRFEQHLTLNHELAFHLRQAW--QSGGDNA--EQKLAQAKETIMALE-TE 691
+K F++++ L W QS NA +K+A + I +
Sbjct: 233 ---NWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMMEKIASCRREISKWKRVS 289
Query: 692 FGSIRKKLHDLEQRLKAAQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKE 751
S ++ +L+ +L AA K P + + R ++ E ++ EE +W+++SR W++
Sbjct: 290 KPSSAVRIQELQFKLDAATKQIPFDRRELAR--LKKELSQEYNNEEQFWQEKSRIMWMRN 347
Query: 752 GDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIEE 811
GD+NT +FH R+ QNRI ++ D+ G + + YF+ +F S E
Sbjct: 348 GDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVE 407
Query: 812 VCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDV 871
+ + ++ +M +L T +EV A ++P K PGPDG YQ++W+ +G +
Sbjct: 408 ELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQI 467
Query: 872 TSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKD 931
T V G +N+T ICLIPK+ E +FRPISLCNVI K++ K +ANR+K
Sbjct: 468 TEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKK 527
Query: 932 VLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWD 991
+L ++ E Q+AF+ GRLI+DN L E+ H + K + ++A+K D+SKAYDR+EW
Sbjct: 528 ILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWP 587
Query: 992 FLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILC 1051
FL++ + +GF LI CV SV Y +L+NG P P RGLRQGDPLSPYLF++C
Sbjct: 588 FLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVIC 647
Query: 1052 VEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYE 1111
E ++ + + + G+KVARGAPPI+HL FADDS+ + + E ++ +I +Y
Sbjct: 648 TEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYS 707
Query: 1112 QASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGK 1171
ASGQ VN KS I F +++ + ++ ++G++ YLGLP SK A
Sbjct: 708 LASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSY 767
Query: 1172 IQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWW 1231
+++R+ +K+ GW+ LS GKEIL+KAVA A+P+Y MSCFK+P IC +IES++A FWW
Sbjct: 768 LKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWW 827
Query: 1232 GQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKA 1291
K+ R +HW AW HL + K G LGF+ +E FN ALL KQ WR++ + SL+ KV+K+
Sbjct: 828 KNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKS 887
Query: 1292 KYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDS-- 1349
+YF K D L A +G +PS+AW+S++ I++G + IGNG+ +++W DPW+ +
Sbjct: 888 RYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAKPAKA 947
Query: 1350 --GYVRTQDVPEFAHEK---VSDLRLWEGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSE 1404
R+ V ++A V DL L +G WN + + LF + I ++R +++
Sbjct: 948 AQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETR 1007
Query: 1405 DKLIWRWSRDGMFSVKSAYYQI-----QSQKIAATASGSNSPSFSWKTLWRVKIQNKVKH 1459
D+ W +SR G +SVKS Y+ + Q S P F + +W++ + K+ H
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIF--QQIWKLDVPPKIHH 1065
Query: 1460 FMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQCSWARAAWFHHSLGLR 1519
F++R +NN +NLA R + ++ C C ET +HL +C +AR W
Sbjct: 1066 FLWRCVNNCLSVASNLAYRHLAREKSCVRCPSH-GETVNHLLFKCPFARLTW------AI 1118
Query: 1520 MDLVQTSFLEWLQSFCAN------------QEDEIVAQVFHGTWAIWKARNESLFNNVQV 1567
L EW +S N +E + A + W +WK RN+ +F +
Sbjct: 1119 SPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREF 1178
Query: 1568 HPATAMEKAQNLLAEWKEAQEHHAPCVQEKRPQ--QWSAPSQGRIKINVDAGWSGP-HST 1624
+ KA + W +E R + +W PS G +K N D WS +
Sbjct: 1179 TAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAWSKDLGNC 1238
Query: 1625 GLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTALEVSLDSVIFKLDSISVV 1684
G+G+V R+H G ++ G + L E ALRW++ + + VIF+ DS +V
Sbjct: 1239 GVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYLV 1298
Query: 1685 KAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPAHTLASLACS---YNTKLW 1741
++ + ++ + D L F + F R N A A + S Y+ K++
Sbjct: 1299 SLIQNEMDIPSLAPRIQDIRNLLRHFEEVKFQFTRREGNNVADRTARESLSLMNYDPKMY 1358
Query: 1742 WDVP 1745
P
Sbjct: 1359 SITP 1362
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 768 bits (1984), Expect = 0.0
Identities = 458/1408 (32%), Positives = 728/1408 (51%), Gaps = 90/1408 (6%)
Query: 386 GGAGRPALPGAMKTISWNCRGVGSPRTVKVLQRIIKAEDPDIVFLMETHKKNGELKNIVA 445
GGAG P M+ WNC+G+G P TV+ L+ + + D++FL+ET +++ +++
Sbjct: 354 GGAGTTTSP--MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGV 411
Query: 446 RLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGF 505
++GF++ + RG GGL + WK+ +I +IS+ + + + +L+
Sbjct: 412 KMGFEDMCIISPRG----LSGGLVVYWKKHLSIQVISHDVRLVDL-YVEYKNFNFYLSCI 466
Query: 506 YGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCL 565
YG+P + W+ L R+ SGPWM GDFNEI + EKKGG R I ++ F +
Sbjct: 467 YGHPIPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMI 526
Query: 566 NQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHA 625
N C ++D+ +G+P++W R++E I+ LDR I+ ++ +PA + L SDHA
Sbjct: 527 NCCNMKDLKSKGNPYSWVGKRQNET-IESCLDRVFINSDWQASFPAFETEFLPIAGSDHA 585
Query: 626 PLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSGGDNAE---------- 675
P++I + + K+ FR+++ + +++ W G ++
Sbjct: 586 PVIIDIAEEVCT-----KRGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSHGGYYEKLHCC 640
Query: 676 -QKLAQAKETIMALETEFGSIRKKLHDLEQRLKAAQKWN--PTEENIMRRKEMENEFAEL 732
Q+LA+ K E K+ L+ R+ AA++ + P + + R+++ + +
Sbjct: 641 RQELAKWKRRTKTNTAE------KIETLKYRVDAAERDHTLPHQTILRLRQDLNQAYRD- 693
Query: 733 MGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTA 792
EELYW +SR W+ GD+NT FF+ R+ +NRI I D G ++ D +
Sbjct: 694 ---EELYWHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKV 750
Query: 793 FSNYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGP 852
NYF +F ++Q ++ EE+ I K+ ++M L + T EV A+ + +APG
Sbjct: 751 AENYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGF 810
Query: 853 DGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPIS 912
DGF A FY W L+G DV V V +NQT ICLIPK+ P++ ++RPIS
Sbjct: 811 DGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPIS 870
Query: 913 LCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKK 972
LC K+++K + R+K LG+V+ + Q+AF+PG+ I+DN L E+ H +K +R+ +
Sbjct: 871 LCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQS 930
Query: 973 GYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFS 1032
GY+A+K D+SKAYDR+EW+FL++V+ +GF + + I CV+SVSY +L+NG P
Sbjct: 931 GYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIF 990
Query: 1033 PQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIF 1092
P RG+RQGDPLSPYLF+ C E S ++ + +HG+K+ + I+HL FADDSL F
Sbjct: 991 PSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFF 1050
Query: 1093 SRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHD 1152
RA+ + L + ++YE+ASGQ +N KS I F + +P + +G+ V
Sbjct: 1051 CRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGG 1110
Query: 1153 KYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCF 1212
KYLGLP +G K +F I +V + +GW LS AGKEI+IKA+A A+P Y M+CF
Sbjct: 1111 KYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCF 1170
Query: 1213 KLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAK 1272
LP IC++I SL+ FWWG KENE GDLGF++L FNRALLAK
Sbjct: 1171 LLPTLICNEINSLITAFWWG-KENE-----------------GDLGFKDLHQFNRALLAK 1212
Query: 1273 QAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGN 1332
QAWR+L + +SLL +++K Y+P L+A G SY W S+ +++G + +G+
Sbjct: 1213 QAWRILTNPQSLLARLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGD 1272
Query: 1333 GKKVSIWKDPWL----PGPDSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKIDQLFNPA 1388
G+ IW+DPWL P P G + +D+ KV+DL W+ + + NP
Sbjct: 1273 GQTTKIWEDPWLPTLPPRPARGPILDEDM------KVADLWRENKREWDPVIFEGVLNPE 1326
Query: 1389 EAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYY-----QIQSQKIAATASGSNSPSF 1443
+ QL KS+ LS + D W ++R+ ++V+S Y+ + ++I G
Sbjct: 1327 DQQLAKSLYLSNYAARDSYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEGDVPLK- 1385
Query: 1444 SWKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQ 1503
+ +WR+KI K+KHF++R ++ L R I C C + ET +H+
Sbjct: 1386 --QEIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCC-NADETINHIIFT 1442
Query: 1504 CSWARAAWFHHSLGLRMDLVQTSFLE----WLQSFCANQEDEIV--AQVFHGTWAIWKAR 1557
CS+A+ W + L T LE + NQ I+ F W +WK+R
Sbjct: 1443 CSYAQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSR 1502
Query: 1558 NESLFNNVQVHPATAMEKAQNLLAEWKEAQEH-----HAPCVQEKRP----QQWSAPSQG 1608
NE LF + P +KA+ EW E + H RP +QWS+P +G
Sbjct: 1503 NEYLFQQLDRFPWKVAQKAEQEATEWVETMVNDTAISHNTAQSNDRPLSRSKQWSSPPEG 1562
Query: 1609 RIKINVDAGW-SGPHSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTAL 1667
+K N D+G+ G T G++ RD G ++ +G Q L AEA+ +L
Sbjct: 1563 FLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSALQAEALGFLHALQMVW 1622
Query: 1668 EVSLDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPAH 1727
V F+ D++ + + ++ L+ D + + S +V+R N+ A
Sbjct: 1623 IRGYCYVWFEGDNLELTNLINKTEDHHLLETLLYDIRFWMTKLPFSSIGYVNRERNLAAD 1682
Query: 1728 TLASLACSYNTKL-WWDVPPPEIEQALF 1754
L A S ++ + VPP ++ L+
Sbjct: 1683 KLTKYANSMSSLYETFHVPPRWLQLYLY 1710
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 751 bits (1940), Expect = 0.0
Identities = 469/1386 (33%), Positives = 710/1386 (50%), Gaps = 70/1386 (5%)
Query: 384 RIGGAGRPALPGAMKTISWNCRGVGSPRTVKVLQRIIKAEDPDIVFLMETHKKNGELKNI 443
R GGAG P G+G P T L R+ + + DI+FL+ET + ++ +
Sbjct: 383 RDGGAGGP--------------GIGMPLTQSRLFRLFRMYNYDILFLVETLNQCDKVCKL 428
Query: 444 VARLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLT 503
LGF N + G GGLAL+WK + ++ +IS + SH + + +L+
Sbjct: 429 AYDLGFPNVITQPPNGRS----GGLALMWKNNVSLSLISQD-ERLIDSHVTFNNKSFYLS 483
Query: 504 GFYGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVR 563
YG+P + + W L + + W+ GDFNEI SNAEK GG R + F
Sbjct: 484 CVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRN 543
Query: 564 CLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSD 623
++ C +EDM +GD F+W G + ++ LDR I+ ++ +P + ++ L SD
Sbjct: 544 MVSHCDIEDMRSKGDRFSWV-GERHTHTVKCCLDRVFINSAWTATFPYAEIEFLDFTGSD 602
Query: 624 HAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSGGDNAEQKLAQAKE 683
H P+L+ E ++ KLFRF+ L ++ +W++ N + E
Sbjct: 603 HKPVLVH-----FNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRT---NRNSRSTPITE 654
Query: 684 TIMALETEFGSIRKKLH-DLEQRLKAAQKWNPTEENIMRR------KEMENEFAELMGRE 736
I + ++ + + EQR+K Q RR +++ A+ E
Sbjct: 655 RISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFSDE 714
Query: 737 ELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNY 796
E+YW+Q+SR W+KEGD+NT +FH R QNR+ I DD G ++ ++
Sbjct: 715 EIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDF 774
Query: 797 FEGIFKSS----QPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGP 852
F IF ++ P + + + N +N + L +EF+ E+ A+ Q+ KAPGP
Sbjct: 775 FTNIFSTNGIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYDAICQIGDDKAPGP 830
Query: 853 DGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPIS 912
DG A FY+ W +VG DV +V + S+N T IC+IPK+ P ++RPI+
Sbjct: 831 DGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIA 890
Query: 913 LCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKK 972
LCNV+ K+++KC+ NR+K L +V + Q+AFIPGR+I DN + EV H +K +++ K
Sbjct: 891 LCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSK 950
Query: 973 GYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFS 1032
YMA+K D+SKAYDR+EWDFL+ + GF +K I V SV YS+L+NG P +
Sbjct: 951 TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYIT 1010
Query: 1033 PQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIF 1092
P RG+RQGDPLSPYLFILC + S LI+ + +L G+++ GAP I HL FADDSL F
Sbjct: 1011 PTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFF 1070
Query: 1093 SRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHD 1152
+A +L DV YE SGQ +N+ KS I+F V ++ ++ + +
Sbjct: 1071 CQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGG 1130
Query: 1153 KYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCF 1212
KYLGLP G KK +F I +RV ++ W + LS AGKEI++K+VA A+P Y MSCF
Sbjct: 1131 KYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCF 1190
Query: 1213 KLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAK 1272
KLP GI S+IESLL NFWW + N+R I W AW+ L +K G LGFR+L FN ALLAK
Sbjct: 1191 KLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAK 1250
Query: 1273 QAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGN 1332
QAWRL+ SL +V KA+YF +L A V Q SY W S+ + +++G + IG+
Sbjct: 1251 QAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGD 1310
Query: 1333 GKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWEGGS---WNISKIDQLFNPAE 1389
G+ + I D + DS R + E E + GS W+ SKI Q + ++
Sbjct: 1311 GQNIRIGLDNIV---DSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSD 1367
Query: 1390 AQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIAATASGSNSP--SFSWKT 1447
I I L+ DK+IW ++ G ++V+S Y+ + + + N P S KT
Sbjct: 1368 HGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIPAINPPHGSIDLKT 1426
Query: 1448 -LWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQCSW 1506
+W + I K+KHF++R ++ L RG++I C C ++ E+ +H C +
Sbjct: 1427 RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRE-NESINHALFTCPF 1485
Query: 1507 ARAAW-FHHSLGLRMDLVQTSFLEWLQSFCANQEDEIVAQVFHG------TWAIWKARNE 1559
A AW S +R L+ F E + + +D ++ FH W IWKARN
Sbjct: 1486 ATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSD-FHKLLPVWLIWRIWKARNN 1544
Query: 1560 SLFNNVQVHPATAMEKAQNLLAEWKEAQEHH----APCVQ-EKRPQQWSAPSQGRIKINV 1614
+FN + P+ + A+ +W A + H +P Q + +W P +K N
Sbjct: 1545 VVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNF 1604
Query: 1615 DAGWSGP--HSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTALEVSLD 1672
DAG+ +TG G++ R+H G + G+ A +PL AE AL +L
Sbjct: 1605 DAGFDVQKLEATG-GWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYT 1663
Query: 1673 SVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPAHTLASL 1732
V + D +++ + S ++ N + D + A+ F SI F + + N AH LA
Sbjct: 1664 QVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRKKGNKLAHVLAKY 1723
Query: 1733 ACSYNT 1738
C+Y+T
Sbjct: 1724 GCTYST 1729
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 732 bits (1890), Expect = 0.0
Identities = 454/1339 (33%), Positives = 689/1339 (50%), Gaps = 56/1339 (4%)
Query: 431 METHKKNGELKNIVARLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYSLHHITA 490
+ET + ++ + LGF N + G GGLAL+WK + ++ +IS +
Sbjct: 190 LETLNQCDKVCKLAYDLGFPNVITQPPNGRS----GGLALMWKNNVSLSLISQD-ERLID 244
Query: 491 SHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGG 550
SH + + +L+ YG+P + + W L + + W+ GDFNEI SNAEK GG
Sbjct: 245 SHVTFNNKSFYLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGG 304
Query: 551 IDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWP 610
R + F ++ C +EDM +GD F+W G + ++ LDR I+ ++ +P
Sbjct: 305 PMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWV-GERHTHTVKCCLDRVFINSAWTATFP 363
Query: 611 ASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSG 670
+ + L SDH P+L+ E ++ KLFRF+ L ++ +W++
Sbjct: 364 YAETEFLDFTGSDHKPVLVH-----FNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRT- 417
Query: 671 GDNAEQKLAQAKETIMALETEFGSIRKKLH-DLEQRLKAAQKWNPTEENIMRR------K 723
N + E I + ++ + + EQR+K Q RR
Sbjct: 418 --NRNSRSTPITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIP 475
Query: 724 EMENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWV 783
+++ A+ EE+YW+Q+SR W+KEGD+NT +FH R QNR+ I DD G
Sbjct: 476 QLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMF 535
Query: 784 YKQDQVTTAFSNYFEGIFKSS----QPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAY 839
++ ++F IF ++ P + + + N +N + L +EF+ E+
Sbjct: 536 TGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLD----LTKEFSDTEIYD 591
Query: 840 ALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKV 899
A+ Q+ KAPGPDG A FY+ W +VG DV +V + S+N T IC+IPK+
Sbjct: 592 AICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKI 651
Query: 900 KAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFE 959
P ++RPI+LCNV+ K+++KC+ NR+K L +V + Q+AFIPGR+I DN + E
Sbjct: 652 TNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHE 711
Query: 960 VFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSY 1019
V H +K +++ K YMA+K D+SKAYDR+EWDFL+ + GF +K I V SV Y
Sbjct: 712 VMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHY 771
Query: 1020 SLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPP 1079
S+L+NG P +P RG+RQGDPLSPYLFILC + S LI+ + +L G+++ GAP
Sbjct: 772 SVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPA 831
Query: 1080 INHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTI 1139
I HL FADDSL F +A +L DV YE SGQ +N+ KS I+F V ++ +
Sbjct: 832 ITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKL 891
Query: 1140 RNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKA 1199
+ + + KYLGLP G KK +F I +RV ++ W + LS AGKEI++K+
Sbjct: 892 KQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKS 951
Query: 1200 VAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGF 1259
VA A+P Y MSCFKLP GI S+IESLL NFWW + N+R I W AW+ L +K G LGF
Sbjct: 952 VALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGF 1011
Query: 1260 RNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTL 1319
R+L FN ALLAKQAWRL+ SL +V KA+YF +L A V Q SY W S+ +
Sbjct: 1012 RDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGI 1071
Query: 1320 KFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWEGGS---W 1376
+++G + IG+G+ + I D + DS R + E E + GS W
Sbjct: 1072 ALLKKGTRHLIGDGQNIRIGLDNIV---DSHPPRPLNTEETYKEMTINNLFERKGSYYFW 1128
Query: 1377 NISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIAATAS 1436
+ SKI Q + ++ I I L+ DK+IW ++ G ++V+S Y+ + + +
Sbjct: 1129 DDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIP 1187
Query: 1437 GSNSP--SFSWKT-LWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDV 1493
N P S KT +W + I K+KHF++R ++ L RG++I C C ++
Sbjct: 1188 AINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRE- 1246
Query: 1494 VETQDHLFLQCSWARAAWF-HHSLGLRMDLVQTSFLEWLQSFCANQEDEIVAQVFHG--- 1549
E+ +H C +A AW+ S +R L+ F E + + +D ++ FH
Sbjct: 1247 NESINHALFTCPFATMAWWLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSD-FHKLLP 1305
Query: 1550 ---TWAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHH----APCVQ-EKRPQQ 1601
W IWKARN +FN + P+ + A+ +W A + H +P Q + +
Sbjct: 1306 VWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE 1365
Query: 1602 WSAPSQGRIKINVDAGWSGP--HSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMAL 1659
W P +K N DAG+ +TG G++ R+H G + G+ A +PL AE AL
Sbjct: 1366 WRNPPATYVKCNFDAGFDVQKLEATG-GWIIRNHYGTPISWGSMKLAHTSNPLEAETKAL 1424
Query: 1660 RWSLHTALEVSLDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVS 1719
+L V + D +++ + S ++ N + D + A+ F SI F +
Sbjct: 1425 LAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIR 1484
Query: 1720 RNANVPAHTLASLACSYNT 1738
R N AH LA C+Y+T
Sbjct: 1485 RKGNKLAHVLAKYGCTYST 1503
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 731 bits (1888), Expect = 0.0
Identities = 426/1285 (33%), Positives = 685/1285 (53%), Gaps = 45/1285 (3%)
Query: 425 PDIVFLMETHKKNGELKNIVARLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYS 484
PDI+FLMET + + LG+ VE EGRS GGLA+ WK I+ + Y+
Sbjct: 7 PDILFLMETKNSQDFVYKVFCWLGYDFIHTVE--PEGRS--GGLAIFWKSHLEIEFL-YA 61
Query: 485 LHHITASHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSN 544
++ ++ F++ YG P + + K W+ L + + + W GDFN+I SN
Sbjct: 62 DKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEHLNSIGLKRAEAWCLIGDFNDIRSN 121
Query: 545 AEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQS 604
EK GG R + F L C + ++G G+ FTW R D+ +Q +LDR + +
Sbjct: 122 DEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNRNDQ-WVQCKLDRCFGNPA 180
Query: 605 FKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLR 664
+ I+P + L ++ SDH P+L+ T+ + + FR+++ L + +
Sbjct: 181 WFSIFPNAHQWFLEKFGSDHRPVLVKFTND-----NELFRGQFRYDKRLDDDPYCIEVIH 235
Query: 665 QAWQS----GGDNAEQKLAQAKETIMALETEFGSIRKKLHDL--EQRLKAAQKWNPTEEN 718
++W S G ++ L + + I S+ K D + R+K +K E++
Sbjct: 236 RSWNSAMSQGTHSSFFSLIECRRAI--------SVWKHSSDTNAQSRIKRLRKDLDAEKS 287
Query: 719 IM-----RRKEMENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIA 773
I R + ++++ + G EEL+WRQ+SR WL GDKNT FFH + + +N ++
Sbjct: 288 IQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELS 347
Query: 774 RIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEFT 833
+ D++ + S++FE +F S+ + +Q K+ EM +L +E T
Sbjct: 348 FLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVT 407
Query: 834 ADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFI 893
EV A+ ++ APGPDGF ALF+Q++W LV + +++ GV P N T I
Sbjct: 408 ELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHI 467
Query: 894 CLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDN 953
CLIPK+ +P+ + RPISLC+V+ K+++K + R+K L +V QSAF+P RLI+DN
Sbjct: 468 CLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDN 527
Query: 954 ALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISIC 1013
L E+ H ++ + K +MA K DMSKAYDR+EW FL+ ++T +GF +K I C
Sbjct: 528 ILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNC 587
Query: 1014 VSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKV 1073
V+SVSYS+L+NG+P P RG+RQGDPLSP LF+LC EA +++ + + GI+
Sbjct: 588 VTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQF 647
Query: 1074 ARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQ 1133
+NHL FADD+L+ +AT++E L+ + QY Q SGQ++N++KS I+F +NV
Sbjct: 648 QDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDI 707
Query: 1134 TSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGK 1193
D I++R G+ KYLGLP + SK+ +FG I+E++ +L GW KTLS+ GK
Sbjct: 708 QIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGK 767
Query: 1194 EILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKN 1253
E+L+K++A A+P YVMSCFKLP +C K+ +++ +FWW + +RKIHW +WQ L K+
Sbjct: 768 EVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKD 827
Query: 1254 RGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWR 1313
+G GF++L+ FN+ALLAKQAWR+L + SL +V++++YF D L A G +PSYAWR
Sbjct: 828 QGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWR 887
Query: 1314 SVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHE--KVSDLRLW 1371
S+ + + +G + IGNG+K +W D WL D R + F + KVS L
Sbjct: 888 SILFGRELLMQGLRTVIGNGQKTFVWTDKWL--HDGSNRRPLNRRRFINVDLKVSQLIDP 945
Query: 1372 EGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQ-- 1429
+WN++ + LF + ++I R + ED W S +G++SVK+ Y + Q
Sbjct: 946 TSRNWNLNMLRDLFPWKDVEIILKQRPLF-FKEDSFCWLHSHNGLYSVKTGYEFLSKQVH 1004
Query: 1430 -KIAATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCAL 1488
++ A S + + +W + K++ F+++ ++ P L RGI+ + C +
Sbjct: 1005 HRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLM 1064
Query: 1489 CSQDVVETQDHLFLQCSWARAAW-FHHSLGLRMDLVQTSFLEWLQSFCANQEDEIVAQVF 1547
C + ET +H+ +C AR W H + + + + Q++++ +
Sbjct: 1065 CDTE-NETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLR 1123
Query: 1548 HGT----WAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQEKRPQQWS 1603
+ W +WK RN LF T ++KA EW AQ H + + +W
Sbjct: 1124 FVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLKITKWC 1183
Query: 1604 APSQGRIKINVDAGWSGPHS-TGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWS 1662
P G +K N+ WS H +G +V RD +G ++L + P A+ + W+
Sbjct: 1184 PPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVHSPYSAKIRSWEWA 1243
Query: 1663 LHTALEVSLDSVIFKLDSISVVKAM 1687
L + D VIF + +++A+
Sbjct: 1244 LESMTHHHFDRVIFASSTHEIIQAL 1268
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 676 bits (1743), Expect = 0.0
Identities = 394/1140 (34%), Positives = 587/1140 (50%), Gaps = 54/1140 (4%)
Query: 622 SDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSGGDNAE----QK 677
SDH+P++ T+ + I GK+ FRF++ L + Q W E +K
Sbjct: 4 SDHSPVIATIADK-IPRGKQN----FRFDKRWIGKDGLLEAISQGWNLDSGFREGQFVEK 58
Query: 678 LAQAKETIMALETE---FGSIRKKLHDLEQRLKAAQKWNPTEENIMRRKEMENEFAELMG 734
L + I FG R+ + DL+ L AQ+ + + E+ E
Sbjct: 59 LTNCRRAISKWRKSLIPFG--RQTIEDLKAELDVAQRDDDRSREEIT--ELTLRLKEAYR 114
Query: 735 REELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFS 794
EE YW Q+SR+ W+K GD N+ FFH QR+ +NRI + D++G W + D +
Sbjct: 115 DEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNIAV 174
Query: 795 NYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDG 854
+YF+ +F ++ P +E ++Q + + + L + T EV AL +HP KAPGPDG
Sbjct: 175 SYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDG 234
Query: 855 FPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLC 914
ALF+QK W ++ D+ S V L +GV LN T ICLIPK + P E RPISLC
Sbjct: 235 MTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLC 294
Query: 915 NVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGY 974
NV K+++K + R+K VL ++ E QSAF+ GRLI+DN L E+FH ++ K +
Sbjct: 295 NVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKF 354
Query: 975 MALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQ 1034
MA+K DMSKAYD++EW+F++ +L MGF K I C+++V Y +L+NG+P P+
Sbjct: 355 MAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPE 414
Query: 1035 RGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSR 1094
RGLRQGDPLSPYLFILC E I R + GIKVA +P ++HL FADDSL F +
Sbjct: 415 RGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCK 474
Query: 1095 ATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKY 1154
A +E+ +L++++QYE SGQ +N KS I F V + I+ +G+ + Y
Sbjct: 475 ANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSY 534
Query: 1155 LGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKL 1214
LGLP +G SK +F +++R+ ++ GW K LSK GKE++IK+VA +P YVMSCF+L
Sbjct: 535 LGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRL 594
Query: 1215 PNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQA 1274
P I SK+ S +A FWW + R +HW AW LC +K+ G LGFRN++DFN ALLAKQ
Sbjct: 595 PKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQL 654
Query: 1275 WRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGK 1334
WRL+ + SL KV+K +YF K + L + Y PSY WRS+ + +G +G+G
Sbjct: 655 WRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGA 714
Query: 1335 KVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKIDQLFNPAEAQLIK 1394
+S+W DPW+P + KV L WNI + +LF+P + LI
Sbjct: 715 SISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLIS 774
Query: 1395 SIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIAATASGSNSPSFSWKTLWRVKIQ 1454
++ + + ED L W +++ G ++VKS Y+ + T + +W+V+
Sbjct: 775 ALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCP 834
Query: 1455 NKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQCSWARAAWFHH 1514
K++HF++++++ P NL +RGI + C C E+ +H QC AR W
Sbjct: 835 PKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGAS-EESINHTLFQCHPARQIW--- 890
Query: 1515 SLGLRMDLVQTSFLEWLQSFCANQEDEIVAQVFHGT---------WAIWKARNESLFNNV 1565
+ + T+ + + D + ++ G W IWKARNE +F NV
Sbjct: 891 ----ALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENV 946
Query: 1566 QVHPATAMEKAQNLLAEWKEAQ-----EHHAPCVQEKRPQQWSAPSQ---GRIKINVDAG 1617
P + A W+EAQ E H + R + + +D
Sbjct: 947 DKDPMEILLLAVKEAQSWQEAQVELHSERHGSLSIDSRIRVRDVSQDTTFSGFRCFIDGS 1006
Query: 1618 W-SGPHSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTALEVSLDSVIF 1676
W + +G G+ G G + L PL E AL W++ + +V F
Sbjct: 1007 WKASDQFSGTGWFCLSSLGESPTMGAANVRRSLSPLHTEMEALLWAMKCMIGADNQNVAF 1066
Query: 1677 KLDSISVVKAMRTNSSLWTIQNLM*DCIYLASL------FTSISFNHVSRNANVPAHTLA 1730
D +VK M ++ + W + +YL L FT+ S + +SR+ANV A LA
Sbjct: 1067 FTDCSDLVK-MVSSPTEWPAFS-----VYLEELQSDREEFTNFSLSLISRSANVKADKLA 1120
>At3g31420 hypothetical protein
Length = 1491
Score = 670 bits (1729), Expect = 0.0
Identities = 423/1374 (30%), Positives = 676/1374 (48%), Gaps = 137/1374 (9%)
Query: 426 DIVFLMETHKKNGELKNIVARLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYSL 485
DI+ L ET +++ ++++ A LGF NH+ V G GGL + W +I + +S
Sbjct: 210 DIICLSETKQQDDRIRDVGAELGFCNHVTVPPDG----LSGGLVVFWNSSVDI-FLCFSN 264
Query: 486 HHITASHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLKGETSGP-WMCFGDFNEITSN 544
++ H +++ + +L+ YG+P ++ W+ L RL G W GDFNEI SN
Sbjct: 265 SNLVDLHVKSNEGSFYLSFVYGHPNPSHRHHLWERLERLNTTRQGTAWFIMGDFNEILSN 324
Query: 545 AEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQS 604
EK+GG RP + F + C D+ GD F+W G++ + H+ LDR + +
Sbjct: 325 REKRGGRLRPERTFQDFRNMVRGCNFTDLKSVGDRFSWA-GKRGDHHVTCSLDRTMANNE 383
Query: 605 FKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAF--- 661
+ ++P S + SDH PL+ +++Q K++++ F ++ LT H+ F
Sbjct: 384 WHTLFPESETVFMEYGESDHRPLVTNISAQ-----KEERRGFFSYDSRLT--HKEGFKQV 436
Query: 662 -----HLRQAWQSGGDNAEQKLAQAKETI--------MALETEFGSIRKKLHDLEQRLKA 708
H R G + +KL + ++ I + E IR KL R A
Sbjct: 437 VLNQWHRRNGSFEGDSSLNRKLVECRQAISRWKKNNRVNAEERIKIIRHKL----DRAIA 492
Query: 709 AQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQK 768
P E R++M + + EE+YW+ +SR+ WL GD+NT +FH R+
Sbjct: 493 TGTATPRE-----RRQMRQDLNQAYADEEIYWQTKSRSRWLNAGDRNTRYFHSTTKTRRC 547
Query: 769 QNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIE--EVCQKIQNKLNQEMRE 826
+NR+ ++D G+ + + NYF+ ++KS+ ++ +V Q Q K+ E+ E
Sbjct: 548 RNRLLSVQDSDGDICRGDENIAKVAINYFDDLYKSTPNTSLRYADVFQGFQQKITDEINE 607
Query: 827 HLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPA 886
L T E+ ++ + P + P PDGF A FYQ++W + V +V +
Sbjct: 608 DLIRPVTELEIEESVFSVAPSRTPDPDGFTADFYQQFWPDIKQKVIDEVTRFFERSELDE 667
Query: 887 SLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIP 946
N T +CLIPKV+ P +FRPI+LCNV K+++K + NR+K LG + E Q+AF+P
Sbjct: 668 RHNHTNLCLIPKVETPTTIAKFRPIALCNVSYKIISKILVNRLKKHLGGAITENQAAFVP 727
Query: 947 GRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKI 1006
GRLIT+NA+ EV++ +K +++ YMALK D++KAYDR+EWDFL++ + MGF +K
Sbjct: 728 GRLITNNAIIAHEVYYALKARKRQANSYMALKTDITKAYDRLEWDFLEETMRQMGFNTKW 787
Query: 1007 TELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLR 1066
E I ICV+ V +S+L+NG P P+RG+R GDPLSPYLFILC E S +I +
Sbjct: 788 IERIMICVTMVRFSVLINGSPHGTIKPERGIRHGDPLSPYLFILCAEVLSHMIKQAEINK 847
Query: 1067 NLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEIS 1126
L GI+++ P I+HL FADDS+ F+ A Q +++ +
Sbjct: 848 KLKGIRLSTQGPFISHLLFADDSIFFTLANQRSCTAIKE--------------------- 886
Query: 1127 FSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEK 1186
P T +R+ +G+ KYLGLP KK +F I E+V K +GW +K
Sbjct: 887 -----PDTKR-RMRHLLGIHNEGGEGKYLGLPEQFNKKKKELFNYIIEKVKDKTQGWSKK 940
Query: 1187 TLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQ 1246
LS+ GKE+L+KAVA A+P Y M+ FKL +C +I+SLLA FWW + +HW W+
Sbjct: 941 FLSQGGKEVLLKAVALAMPVYSMNIFKLTKEVCEEIDSLLARFWWSSGNETKGMHWFTWK 1000
Query: 1247 HLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGY 1306
+ K G LGF+ LE+FN ALL KQ W LL L+ +V + +YFP+ +++ A G
Sbjct: 1001 RMSIPKKEGGLGFKELENFNLALLGKQTWHLLQHPNCLMARVLRGRYFPETNVMNAVQGR 1060
Query: 1307 QPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLP--GPDSGYVRTQDVPEFAHEK 1364
+ S+ W+S+ +++G + +G+G ++ W DPWLP P + Y + +D PE
Sbjct: 1061 RASFVWKSILHGRNLLKKGLRCCVGDGSLINAWLDPWLPLHSPRAPY-KQEDAPE----- 1114
Query: 1365 VSDLRLWEGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYY 1424
QL + A+ +D + W +++DGM++VKSAY+
Sbjct: 1115 ------------------QLLVCSTAR------------DDLIGWHYTKDGMYTVKSAYW 1144
Query: 1425 QIQSQKIAATASGSNSPSFSWK---TLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQ 1481
+ + T +G++ P K LW+ K K+KHF +++++ L R I
Sbjct: 1145 --LATHLPGT-TGTHPPPGDIKLKQLLWKTKTAPKIKHFCWKILSGAIATGEMLRYRHIN 1201
Query: 1482 IQEQCALCSQDVVETQDHLFLQCSWARAAWFHHSLGLRMDLVQTSFLEWLQSFCA----- 1536
Q C C +D ET HLF +C +A+A W GL + Q S + + F A
Sbjct: 1202 KQSICKRCCRD-EETSQHLFFECDYAKATW--RGAGLPNLIFQDSIVTLEEKFRAMFTFN 1258
Query: 1537 -NQEDEIVAQVFHGTWAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQ 1595
+ + F W +W++RN F + ++ A+ EW++ ++ VQ
Sbjct: 1259 PSTTNYWRQLPFWILWRLWRSRNILTFQQKHIPWEVTVQLAKQDALEWQDIEDR----VQ 1314
Query: 1596 EKRP-----------QQWSAPSQGRIKINVDAGWSGPHSTGLGFVARDHRGIIMLAGTCL 1644
P +W+ P G K N D +S ++ G+V RD G + G
Sbjct: 1315 VINPLSRRHSNRYAANRWTRPVCGWKKCNYDGSYSTIINSKAGWVIRDEHGQFIGGGQAK 1374
Query: 1645 EAQRLDPLIAEAMALRWSLHTALEVSLDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCI 1704
+ L + AL ++ + V F+ D+I V + + + + + N + D
Sbjct: 1375 GKHTNNALESALQALIIAMQSCWSHGHTKVCFEGDNIEVYQILNEGKARFDVYNWIRDIQ 1434
Query: 1705 YLASLFTSISFNHVSRNANVPAHTLASLACSYNTKL-WWDVPPPEIEQALFVDA 1757
F F ++R N PA TLA + ++ PP I AL +D+
Sbjct: 1435 AWKRRFQECRFLWINRRNNKPADTLAKGHLQQHEHFKFYSFIPPVIFSALHLDS 1488
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 655 bits (1691), Expect = 0.0
Identities = 416/1339 (31%), Positives = 653/1339 (48%), Gaps = 109/1339 (8%)
Query: 431 METHKKNGELKNIVARLGFKNHLGVECRGEGRSSGGGLALLWKEDFNIDIISYSLHHITA 490
MET ++ + +G+ + + G GGLAL WKE+ ++I+ + + I
Sbjct: 1 METKNQDEFISKTFDWMGYAHRFTIPPEG----LSGGLALYWKENVEVEILEAAPNFI-- 54
Query: 491 SHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGG 550
N+ WD + L + S W+ GDFN+I N+EK+GG
Sbjct: 55 ---------------------DNRSVFWDKISSLGAQRSSAWLLTGDFNDILDNSEKQGG 93
Query: 551 IDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWP 610
R F ++Q GL D+ G+ +W G + I+ RLDR + + S+ E++P
Sbjct: 94 PLRWEGFFLAFRSFVSQNGLWDINHTGNSLSW-RGTRYSHFIKSRLDRALGNCSWSELFP 152
Query: 611 ASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQ-S 669
S ++L SDH PL+ + P+ K+ K FRF++ L E+ +++ W+ +
Sbjct: 153 MSKCEYLRFEGSDHRPLVTYFGAPPL-----KRSKPFRFDRRLREKEEIRALVKEVWELA 207
Query: 670 GGDNAEQKLAQAKETIMALETEFGS-IRKKLHDLEQRLKAAQKWNPTEENIMRRKEMENE 728
D+ K+++ +++I+ E S K + +Q L++A + + +++ E E
Sbjct: 208 RQDSVLYKISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIPDPSLIGSITQELE 267
Query: 729 FAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQ 788
A +EEL+W+Q SR WL GD+N +FH R+ N ++ I D G ++++Q
Sbjct: 268 AA--YRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQ 325
Query: 789 VTTAFSNYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLK 848
+ + S+YF+ IF +S ++++ V + + ++ E L + + E+ AL + K
Sbjct: 326 IASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSISADK 385
Query: 849 APGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEF 908
APGPDGF A F+ YW ++ DV+ + LN+T + LIPK+ AP ++
Sbjct: 386 APGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDY 445
Query: 909 RPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKR 968
RPI+LCNV K+V K + R++ L E++ QSAF+PGR I DN L E+ H+++
Sbjct: 446 RPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILHFLRVSG 505
Query: 969 KGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPS 1028
K MA+K DMSKAYDRI+W+FL++VL +GF K + CV +VSYS L+NG P
Sbjct: 506 AKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQ 565
Query: 1029 PPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADD 1088
P RGLRQGDPLSPYLFILC E SGL + GI+VARG+P +NHL FADD
Sbjct: 566 GSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADD 625
Query: 1089 SLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAV 1148
++ F + +L +++++YE ASGQ +N+ KS I+FS PQ ++ + +
Sbjct: 626 TMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDNE 685
Query: 1149 IVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYV 1208
KYLGLP G K+ IF I +R+ ++ W + LS AGK+IL+KAV ++PSY
Sbjct: 686 GGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYA 745
Query: 1209 MSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRA 1268
M CFKLP +C +I+S+L FWW K ++RK+ W +W L N G LGFR +E
Sbjct: 746 MMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPINEGGLGFREIE----- 800
Query: 1269 LLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYA---WRSVWGTLKFIEEG 1325
AK +WR+L SLL +V KY + PS+A WR + + +G
Sbjct: 801 --AKLSWRILKEPHSLLSRVLLGKYCNTSSFMDCSA--SPSFASHGWRGILAGRDLLRKG 856
Query: 1326 CKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHE-KVSDLRLWEGGSWNISKIDQL 1384
WSIG G +++W + WL P S E + V DL + SWN+ I +
Sbjct: 857 LGWSIGQGDSINVWTEAWL-SPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNVEAIRKH 915
Query: 1385 FNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIAATASGSNSPSFS 1444
E Q I+ I ++ +D L+W + G ++ K+ Y + A + F+
Sbjct: 916 LPQYEDQ-IRKITINALPLQDSLVWLPVKSGEYTTKTGYALAKLNSFPA-----SQLDFN 969
Query: 1445 W-KTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQ 1503
W K +W++ KVKHF+++ + P L+RR I+ + C C Q E+ HL L
Sbjct: 970 WQKNIWKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRCGQ--TESSLHLMLL 1027
Query: 1504 CSWARAAW------------FHHSLGLRM------------DLVQTSFLEWLQSFCANQE 1539
C +A+ W H S+ L + L WL
Sbjct: 1028 CPYAKKVWELAPVLFNPSEATHSSVALLLVDAKRMVALPPTGLGSAPLYPWL-------- 1079
Query: 1540 DEIVAQVFHGTWAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQ---EHHAPCVQE 1596
W +WKARN +F+N + KA W EAQ H +P
Sbjct: 1080 ----------LWHLWKARNRLIFDNHSCSEEGLVLKAILDARAWMEAQLLIHHPSPISDY 1129
Query: 1597 KRPQQWSAPSQGRIKINVDAGWSGPHSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEA 1656
P P+ VDA W+ G+G+ +D + + + L+AE
Sbjct: 1130 PSP----TPNLKVTSCFVDAAWTTSGYCGMGWFLQDPYKVKIKENQSSSSFVGSALMAET 1185
Query: 1657 MALRWSLHTALEVSLDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFN 1716
+A+ +L AL + + D ++ + + S+ ++ L+ D L+ FT + F
Sbjct: 1186 LAVHLALVDALSTGVRQLNVFSDCKELISLLNSGKSIVELRGLLHDIRELSVSFTHLCFF 1245
Query: 1717 HVSRNANVPAHTLASLACS 1735
+ R +NV A +LA A S
Sbjct: 1246 FIPRLSNVVADSLAKSALS 1264
>At1g24640 hypothetical protein
Length = 1270
Score = 648 bits (1672), Expect = 0.0
Identities = 396/1244 (31%), Positives = 630/1244 (49%), Gaps = 76/1244 (6%)
Query: 466 GGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLK 525
GGLALLWK +D+ + ++ + + ++ YG P+ + ++W+ + R+
Sbjct: 29 GGLALLWKSSVQVDL-KFVDKNLMDAQVQFGAVNFCVSCVYGDPDRSKRSQAWERISRIG 87
Query: 526 GETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNG 585
W FGDFN+I N EK GG R K F + C L +M G+ FTW G
Sbjct: 88 VGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWA-G 146
Query: 586 RKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKK 645
R+ + IQ RLDR ++ + +P S+ L SDH P+LI + S + +
Sbjct: 147 RRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSS-----QDSYRG 201
Query: 646 LFRFEQHLTLNHELAFHLRQAWQSGGDNAEQKLAQAKETIMALETEFGSIRK-------- 697
FRF++ ++ + + W G +A + + A S +K
Sbjct: 202 QFRFDKRFLFKEDVKEAIIRTWSRGKHGTNISVA---DRLRACRKSLSSWKKQNNLNSLD 258
Query: 698 KLHDLEQRLKAAQK--WNPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKEGDKN 755
K++ LE L+ Q W + + +K++ + E EE YW+Q+SR WL+ G++N
Sbjct: 259 KINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYRE----EEAYWKQKSRQKWLRSGNRN 314
Query: 756 TSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIEEVCQK 815
+ +FH Q +++ RI +++D +GN + + YF +FKSS P+ +
Sbjct: 315 SKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSG 374
Query: 816 IQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQV 875
+ ++++ M E L E +A E+ A+ + P APGPDG ALF+Q YW VG VTS+V
Sbjct: 375 LVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEV 434
Query: 876 LEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGE 935
+ G+ PA N T +CLIPK + P ++ RPISLC+V+ K+++K +A R++ L E
Sbjct: 435 KKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPE 494
Query: 936 VVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQ 995
+V + QSAF+ RLITDN L E+ H +K + +MA+K DMSKAYDR+EW +L+
Sbjct: 495 IVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRS 554
Query: 996 VLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAF 1055
+L ++GF K I +CVSSV+YS+L+N P QRGLRQGDPLSP+LF+LC E
Sbjct: 555 LLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGL 614
Query: 1056 SGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASG 1115
+ L++ L GI+ + P ++HL FADDSL +A++E++ L +++ Y A+G
Sbjct: 615 THLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATG 674
Query: 1116 QLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQER 1175
Q +N++KS I+F V + TIR +G+ YLGLP SK + +++R
Sbjct: 675 QTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDR 734
Query: 1176 VWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKE 1235
+ KL W + LS+ GKE+L+K+VA A+P + MSCFKLP C +ES +A+FWW +
Sbjct: 735 LKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCD 794
Query: 1236 NERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFP 1295
+ RKIHW +W+ LC K+ G LGFR+++ FN+ALLAKQAWRLL+ LL ++ K++YF
Sbjct: 795 HSRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFD 854
Query: 1296 KCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQ 1355
D L A + +PS+ WRS+ + + +G + +G+G + +W DPW+ D+G+ R
Sbjct: 855 ATDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWI--DDNGF-RAP 911
Query: 1356 DVPEFAHE---KVSDLRLWEGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWS 1412
++ KV L G W+ + LF P + IK+I+ D +W+ +
Sbjct: 912 WRKNLIYDVTLKVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQADFFVWKLN 970
Query: 1413 RDGMFSVKSAY---YQIQSQKIAATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVINNLT 1469
+ G FSVKSAY YQ +SQ + + S S +W ++ K+K F+++V L
Sbjct: 971 KSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWKVCGELG 1030
Query: 1470 PCRANLARRGIQIQEQCALCSQDVVETQDHLFLQCSWARAAWFHHSLGLRMD-LVQTSFL 1528
E+ +H C +R W D S
Sbjct: 1031 -------------------------ESTNHTLFLCPLSRQIWALSDYPFPPDGFSNGSIY 1065
Query: 1529 EWLQSFCANQEDE----IVAQVFHG-TWAIWKARNESLFNNVQVHPATAMEKAQNLLAEW 1583
+ N++++ + ++F W IWK RN +F + + K ++ + EW
Sbjct: 1066 SNINHLLENKDNKEWPINLRKIFPWILWRIWKNRNSFIFEGISYPATDTVIKIRDDVVEW 1125
Query: 1584 KEAQEHHAPCVQEKRPQQWSAPSQGRIKINVDAGWSGPHSTGLGFVARDHRGIIMLAGTC 1643
EAQ P G + N+ W P + + GI++L
Sbjct: 1126 FEAQCLDGEGSALNPPLSNGVHFVGSVSENL---WIKPPA--------NWDGIVLLHSRR 1174
Query: 1644 LEAQRLDPLIAEAMALRWSLHTALEVSLDSVIFKLDSISVVKAM 1687
A A L W++ + +D++IF S++ A+
Sbjct: 1175 SFAPISSKADALLRCLLWAMESMASHKIDNIIFAFQDKSLIGAV 1218
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 632 bits (1629), Expect = 0.0
Identities = 384/1240 (30%), Positives = 620/1240 (49%), Gaps = 45/1240 (3%)
Query: 466 GGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGFYGYPESQNKIKSWDLLVRLK 525
GGLA+ WK ID + + ++ + + + F++ YG P + D L +
Sbjct: 29 GGLAIFWKNHLEIDFL-FEDKNLLDLKVSQGKKSWFVSCVYGNPVLHLRYLLLDKLSSIG 87
Query: 526 GETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNG 585
+ + W GDFN+I SN K GG R I + F L C + MG G+ FTW G
Sbjct: 88 VQRNSAWCMIGDFNDILSNDGKLGGPSRLISSFQPFKNMLLNCDMHQMGSSGNSFTW-GG 146
Query: 586 RKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLIT-VTSQPIEEGKKKKK 644
+++ IQ +LDR + + ++ S L + S H P+L+ V Q + G+
Sbjct: 147 TRNDQWIQCKLDRCFGNSEWFTMFSNSHQWFLEKLGSHHRPVLVNFVNDQEVFRGQ---- 202
Query: 645 KLFRFEQHLTLNHELAFHLRQAWQSGG----DNAEQKLAQAKETIMALE--TEFGSIRKK 698
F +++ + + A +W G ++ ++ + ++ I + ++F + +
Sbjct: 203 --FCYDKRFAEDPQCAASTLSSWIGNGISDVSSSMLRMVKCRKAISGWKKNSDFNAQNRI 260
Query: 699 LHDLEQRLKAAQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKEGDKNTSF 758
L + + K P I ++ + EE +WR +S+ WL GD+N+ F
Sbjct: 261 LRLRSELDEEKSKQYPCWSRI---SVIQTQLGVAFREEESFWRLKSKDKWLFGGDRNSKF 317
Query: 759 FHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIEEVCQKIQN 818
F + +N + + D++GN + S YFE +F SS P N + +
Sbjct: 318 FQAMVKANRTKNSLRFLVDENGNEHTLNREKGNIASVYFENLFMSSYPANSQSALDGFKT 377
Query: 819 KLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEI 878
++++EM + L + T E+ A+ ++ AP +K G D ++L
Sbjct: 378 RVSEEMNQELTQAVTELEIHSAVFSINVESAP----------EKLECCQGSDYI-EILGF 426
Query: 879 LNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVG 938
GV P N T + LIPK P+ + RPISLC+V+ K+++K ++ ++K L +V
Sbjct: 427 FETGVLPQEWNHTHLYLIPKFTNPQRMSDIRPISLCSVLYKIISKILSFKLKKHLPSIVS 486
Query: 939 EQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLT 998
QSAF RLI+DN L E+ H ++ K K +M K DMSKAYDR+EW FL+++L
Sbjct: 487 PSQSAFFAERLISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEILV 546
Query: 999 TMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGL 1058
+GF K I CV+SV+YS+L+NG+ +P+RG+RQGDP+SP+LF+LC EA +
Sbjct: 547 ALGFNDKWISWIMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISPFLFVLCTEALIHI 606
Query: 1059 ISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLV 1118
+ + + GI+ P +NHL F DD+ + RAT+ + ++ + QY SGQL+
Sbjct: 607 LQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISGQLI 666
Query: 1119 NMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWR 1178
N++KS I+F V + + I+NR G+ KYLGLP + SK+ +FG I+E++
Sbjct: 667 NVEKSSITFGVKVDEDTKRWIKNRSGIHLEGGTGKYLGLPENLSGSKQDLFGYIKEKLQS 726
Query: 1179 KLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENER 1238
L GW +KTLS+ GKEIL+K++A A+P Y+M+CF+LP G+C+K+ S++ +FWW E
Sbjct: 727 HLSGWYDKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSN 786
Query: 1239 KIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCD 1298
KIHW + L K+ G GF++L+ FN+ALLAKQAWRL + KS++ +++K++YF D
Sbjct: 787 KIHWIGGKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTD 846
Query: 1299 LLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVP 1358
L A G +PSY WRS+ + + G K IGNG++ ++W D WL S
Sbjct: 847 FLNARQGTRPSYTWRSILYGRELLNGGLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHSL 906
Query: 1359 EFAHEKVSDLRLWEGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFS 1418
H KVS L +WN+ K+ +LF+ + QLI R SED W + +G+++
Sbjct: 907 MNIHMKVSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQR-PLISSEDSYCWAGTNNGLYT 965
Query: 1419 VKSAYYQIQSQKI-----AATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVINNLTPCRA 1473
VKS Y + + A S +P F +W ++ K+K FM++ +
Sbjct: 966 VKSGYERSSRETFKNLFKEADVYPSVNPLFD--KVWSLETVPKIKVFMWKALKGALAVED 1023
Query: 1474 NLARRGIQIQEQCALCSQDVVETQDHLFLQCSWARAAWFHHSLGLRMDLVQTSFLEWLQS 1533
L RGI+ + C C ++ +ET +HL QC +AR W + TS +
Sbjct: 1024 RLRSRGIRTADGCLFCKEE-IETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINH 1082
Query: 1534 FCANQEDEIVAQVFHGT-----WAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQE 1588
N ++ + + W IWK RN++LF + + + KA W AQE
Sbjct: 1083 VIQNSQNFGIPRHMRTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQE 1142
Query: 1589 HHAPCVQEKRPQQWSAPSQGRIKINVDAGWSGPHS-TGLGFVARDHRGIIMLAGTCLEAQ 1647
+ V +W+ P G +K N+ WS G+ +V RD G ++L +Q
Sbjct: 1143 KSSGGVSPSE-HKWNPPPAGELKCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSYSQ 1201
Query: 1648 RLDPLIAEAMALRWSLHTALEVSLDSVIFKLDSISVVKAM 1687
A+ + W+L + D V F S ++KA+
Sbjct: 1202 VYSLFDAKIKSWDWALESMDHFHFDKVTFAATSHDIIKAL 1241
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 632 bits (1629), Expect = 0.0
Identities = 360/981 (36%), Positives = 536/981 (53%), Gaps = 29/981 (2%)
Query: 539 NEITSNAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDR 598
NEI N+EK+GG R F +++ GL D+ + G+PF+W G + + +++RLDR
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSW-RGMRYDWFVRQRLDR 94
Query: 599 GVISQSFKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHE 658
+ + S+ E +P+ ++L SDH PL++ V +E + K++ FRF+ L N
Sbjct: 95 AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVFV-----DEARVKRRGQFRFDNRLRDNDV 149
Query: 659 LAFHLRQAWQSGGD-NAEQKLAQAKETIMALE-----TEFGSIRKKLHDLEQRLKAAQKW 712
+ +++ W + GD + K+ Q + I+ I K LE+ L A
Sbjct: 150 VNALIQETWTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALTADPP- 208
Query: 713 NPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRI 772
NPT + +E+ + EE +W+QRSR WL GD+NT +FH R+ QNR+
Sbjct: 209 NPTTIGALTAT-LEHAYK----LEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRL 263
Query: 773 ARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEF 832
+ D +G +++ Q++ S YF+ IF S + V + I+ ++Q + L
Sbjct: 264 TVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIP 323
Query: 833 TADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTF 892
+EV A+ ++ KAPGPDGF A FY YW ++ DV ++ P +N+T
Sbjct: 324 NDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETH 383
Query: 893 ICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITD 952
I LIPK P ++RPI+LCN+ K+V K + R++ +L +++ E QSAF+PGR+I+D
Sbjct: 384 IRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISD 443
Query: 953 NALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISI 1012
N L EV H+++ K MA+K DMSKAYDR+EWDFLK+VL GF S + +
Sbjct: 444 NVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLE 503
Query: 1013 CVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIK 1072
CV+SVSYS L+NG P P RGLRQGDPLSP LFILC E SGL + RLR L G++
Sbjct: 504 CVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVR 563
Query: 1073 VARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVP 1132
V+ P +NHL FADD++ FS++ E + L +++ +Y +ASGQ +N KS ++FS P
Sbjct: 564 VSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTP 623
Query: 1133 QTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAG 1192
++ ++ + ++ KYLGLP G K+ IFG I +++ +K W + LS+AG
Sbjct: 624 RSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAG 683
Query: 1193 KEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTK 1252
K++++KAV ++P Y MSCFKLP+ +C KI+SLL FWW K + RK W AW L K
Sbjct: 684 KQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPK 743
Query: 1253 NRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAW 1312
N G LGFR++E N +LLAK WRLLNS +SLL ++ KY ++ + QPS+ W
Sbjct: 744 NAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGW 803
Query: 1313 RSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWE 1372
RS+ + ++EG W I NG+KVSIW DPWL + E +VS L
Sbjct: 804 RSIIAGREILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQN 863
Query: 1373 GGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIA 1432
W+ +KI + P LIK + DKL W + G ++ +S Y IA
Sbjct: 864 TLQWDWNKIAVIL-PNYENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGY------GIA 916
Query: 1433 ATAS-GSNSPSFSWKT-LWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCS 1490
+ AS F+W++ LW+++ K+KH M++ P L RR I C C
Sbjct: 917 SVASIPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRCG 976
Query: 1491 QDVVETQDHLFLQCSWARAAW 1511
E+ HLF C +A W
Sbjct: 977 --APESTTHLFFHCEFAAQVW 995
Score = 48.1 bits (113), Expect = 4e-05
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 1614 VDAGWSGPHS-TGLGFVARDHRGIIMLAGTCLEAQRLDP--LIAEAMALRWSLHTALEVS 1670
VDA W S G G+V + + T R P L AEA A++ +L AL++
Sbjct: 1089 VDAAWIAQSSLAGSGWVFQSATALEKETATYSAGCRRLPSALSAEAWAIKSALLHALQLG 1148
Query: 1671 LDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPAHTLA 1730
++ DS SVV A+ +N S+ I L+ + L F S+ FN +SR+AN A A
Sbjct: 1149 RTDLMVLSDSKSVVDALTSNISINEIYGLLMEIRALRVSFHSLCFNFISRSANAIADATA 1208
Query: 1731 SLA 1733
L+
Sbjct: 1209 KLS 1211
>At4g10830 putative protein
Length = 1294
Score = 613 bits (1581), Expect = e-175
Identities = 341/940 (36%), Positives = 523/940 (55%), Gaps = 23/940 (2%)
Query: 405 RGVGSPRTVKVLQRIIKAEDPDIVFLMETHKKNGELKNIVARLGFKNHLGVECRGEGRSS 464
+G+G P T L + K D++FL+ET K + N+ + LGF N + +G
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHS--- 426
Query: 465 GGGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGFYGYPESQNKIKSWDLLVRL 524
GGLALLWK+ + + HI H + + I +L+ YG+P + W L
Sbjct: 427 -GGLALLWKDSVRLSNLYQDDRHIDV-HISINNINFYLSRVYGHPCQSERHSLWTHFENL 484
Query: 525 KGETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCN 584
+ PW+ GDFNEI SN EK GG R + F ++ C L+D+ GD F+W
Sbjct: 485 SKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWV- 543
Query: 585 GRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKK 644
G + ++ LDR I+ ++P + ++ L SDH PL ++ +E+ + +K
Sbjct: 544 GERHSHTVKCCLDRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLS-----LEKTETRKM 598
Query: 645 KLFRFEQHLTLNHELAFHLRQAWQSGGDNAEQKLAQAKETIMALETEFG-----SIRKKL 699
+ FRF++ L +++ W + + L T + + R ++
Sbjct: 599 RPFRFDKRLLEVPHFKTYVKAGWNKAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRIRI 658
Query: 700 HDLEQRL-KAAQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSRATWLKEGDKNTSF 758
+ L+ L KA N TE + ++ E EE YW+Q+SR W+KEGD+NT F
Sbjct: 659 NQLQAALDKAMSSVNRTERRTI--SHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEF 716
Query: 759 FHGKANQRQKQNRIARIRDDHGNWVYKQD-QVTTAFSNYFEGIFKSS-QPNNIEEVCQKI 816
FH R NR+ I+D+ G +Y+ D ++ +F +++S+ +P +I +
Sbjct: 717 FHACTKTRFSVNRLVTIKDEEG-MIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAG-F 774
Query: 817 QNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVL 876
+ + +++ + L ++ + E+ A+ + KAPGPDG A FY+ W++VG DV +V
Sbjct: 775 KPIVTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVK 834
Query: 877 EILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEV 936
S+N T IC+IPK+ PE ++RPI+LCNV+ K+++KC+ R+K L +
Sbjct: 835 IFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAI 894
Query: 937 VGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQV 996
V + Q+AFIPGRL+ DN + E+ H +K +++ + YMA+K D+SKAYDR+EW+FL+
Sbjct: 895 VSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETT 954
Query: 997 LTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFS 1056
+ GF + I V SV+YS+LVNG P PQRG+RQGDPLSPYLFILC + +
Sbjct: 955 MRLFGFSETWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILN 1014
Query: 1057 GLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQ 1116
LI N++ ++ GI++ G P + HL FADDSL F ++ +L DV YE SGQ
Sbjct: 1015 HLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQ 1074
Query: 1117 LVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERV 1176
+NM KS I+F V T+ + ++N +G+++ KYLGLP G K+ +F I ERV
Sbjct: 1075 KINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERV 1134
Query: 1177 WRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKEN 1236
++ W K LS AGKEI++K+VA ++P Y MSCFKLP I S+IE+LL NFWW +
Sbjct: 1135 KKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAK 1194
Query: 1237 ERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPK 1296
+R+I W AW+ L +K G LGFR+L FN ALLAKQ WR++N+ SL ++ KA+YF +
Sbjct: 1195 KREIPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFRE 1254
Query: 1297 CDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKV 1336
+L A SY W S+ L I++G ++ +G+GK V
Sbjct: 1255 DSILDAKRQRYQSYGWTSMLAGLDVIKKGSRFIVGDGKTV 1294
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 588 bits (1516), Expect = e-168
Identities = 412/1341 (30%), Positives = 634/1341 (46%), Gaps = 79/1341 (5%)
Query: 426 DIVFLMETHKKNGELKNIVARLGFKNHLGVECRGEGRSSGGGLALLWKEDFN-IDIISYS 484
D++ + ETH + I LGF+N V+ G GGL LLW+ + ++ +
Sbjct: 595 DVLAIFETHAGGDQASRICQGLGFENSFRVDAVGHS----GGLWLLWRTGIGEVSVVDST 650
Query: 485 LHHITASHTNA-DQITCFLTGFYGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITS 543
I A N D + L Y P + + WD L + GP + GDFN I
Sbjct: 651 DQFIHAKDVNGKDNVN--LVVVYAAPTASRRSGLWDRLGDVIRSMDGPVVIGGDFNTIVR 708
Query: 544 NAEKKGGIDRPIEHMKKFVRCLNQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQ 603
E+ GG R F +N L D+GF+G+ FTW GR++ + +RLDR +
Sbjct: 709 LDERSGGNGRLSSDSLAFGEWINDHSLIDLGFKGNKFTWKRGREERFFVAKRLDRVLCCA 768
Query: 604 SFKEIWPASSVQHLLRYNSDHAPLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHL 663
+ W +SV HL SDHAPL + +T E + ++ FRFE
Sbjct: 769 HARLKWQEASVLHLPFLASDHAPLYVQLTP---EVSGNRGRRPFRFEA------------ 813
Query: 664 RQAWQSGGDNAEQKLAQAKETIMALETEFGSIRKKLHDLEQRLKAAQKWNPTEENIMRRK 723
AW S E L + I E LH + LK + +
Sbjct: 814 --AWLSHPGFKELLLTSWNKDISTPEALKVQELLDLHQSDDLLK-------------KEE 858
Query: 724 EMENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWV 783
E+ +F ++ +EE+ W Q+SR W GD+NT FFH R+++N+I ++D+ G W+
Sbjct: 859 ELLKDFDVVLEQEEVVWMQKSREKWFVHGDRNTKFFHTSTIIRRRRNQIEMLQDNDGRWL 918
Query: 784 YKQDQVTTAFSNYFEGIFKSSQPNNI-EEVCQKIQNKLNQEMREHLEEEFTADEVAYALN 842
++ T +Y++ ++ + + E++ Q+ L++ L + F+ EV A+
Sbjct: 919 SNAQELETHAIDYYKRLYSLDDLDAVVEQLPQEGFTALSEADFSSLTKPFSPLEVEGAIR 978
Query: 843 QMHPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAP 902
M KAPGPDGF +FYQ+ W++VG VT V++ + G P N + LI KV P
Sbjct: 979 SMGKYKAPGPDGFQPVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVLKP 1038
Query: 903 ENPMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFH 962
E +FRPISLCNV+ K +TK + R+K V+ +++G Q++FIPGRL TDN + EV H
Sbjct: 1039 EKITQFRPISLCNVLFKTITKVMVGRLKGVINKLIGPAQTSFIPGRLSTDNIVVVQEVVH 1098
Query: 963 YMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLL 1022
M++K KG KG+M LKLD+ KAYDRI WD L+ L G P + I CV S LL
Sbjct: 1099 SMRRK-KGVKGWMLLKLDLEKAYDRIRWDLLEDTLKAAGLPGTWVQWIMKCVEGPSMRLL 1157
Query: 1023 VNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINH 1082
NGE + F P RGLRQGDPLSPYLF+LC+E LI + I + IK+++ P ++H
Sbjct: 1158 WNGEKTDAFKPLRGLRQGDPLSPYLFVLCIERLCHLIESSIAAKKWKPIKISQSGPRLSH 1217
Query: 1083 LFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNR 1142
+ FADD ++F+ A+ ++ L V+ ++ ASGQ V+++KS+I FS+NV + I
Sbjct: 1218 ICFADDLILFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKNVLRDLGKRISEE 1277
Query: 1143 MGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQ 1202
G+KA KYLG+P + K FG++ +R +L GWK + LS AG+ L KAV
Sbjct: 1278 SGMKATKDLGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSFAGRLTLTKAVLT 1337
Query: 1203 AIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNL 1262
+I + MS KLP ++ + F WG ++K H AW +C + G LG R+
Sbjct: 1338 SILVHTMSTIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHLVAWTRVCLPRREGGLGIRSA 1397
Query: 1263 EDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYA-----WRSVW- 1316
N+AL+AK WR+LN SL +V ++KY K G + ++ W S W
Sbjct: 1398 TAMNKALIAKVGWRVLNDGSSLWAQVVRSKY-------KVGDVHDRNWTVAKSNWSSTWR 1450
Query: 1317 ----GTLKFIEEGCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLR-LW 1371
G I W IG+G+++ W D WL ++ VP + + R LW
Sbjct: 1451 SVGVGLRDVIWREQHWVIGDGRQIRFWTDRWL--SETPIADDSIVPLSLAQMLCTARDLW 1508
Query: 1372 -EGGSWNISKIDQ-LFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQ 1429
+G W++S+I + + L+ I S + D+L W + DG F+VKSA+ + +
Sbjct: 1509 RDGTGWDMSQIAPFVTDNKRLDLLAVIVDSVTGAHDRLAWGMTSDGRFTVKSAFAMLTND 1568
Query: 1430 KIAATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALC 1489
S S + +W+V+ +V+ F++ V+N + RR + + C +C
Sbjct: 1569 D-----SPRQDMSSLYGRVWKVQAPERVRVFLWLVVNQAIMTNSERKRRHLCDSDVCQVC 1623
Query: 1490 SQDVVETQDHLFLQCSWARAAWFH-HSLGLRMDLVQTSFLEWLQS----FCANQEDEIVA 1544
+ +E+ H+ C W L+ S LEWL S + +
Sbjct: 1624 -RGGIESILHVLRDCPAMSGIWDRIVPRRLQQSFFTMSLLEWLYSNLRQGLMTEGSDWST 1682
Query: 1545 QVFHGTWAIWKARNESLFNNVQV---HPATAMEKAQNLLAEWKEAQEHHAPCVQEKRPQQ 1601
W WK R ++F + + A + + E ++ +P +
Sbjct: 1683 MFAMAVWWGWKWRCSNIFGENKTCRDRVRFIKDLAVEVSIAYSREVELRLSGLRVNKPIR 1742
Query: 1602 WSAPSQGRIKINVDAGWSG-PHSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALR 1660
W+ P +G KIN D G P G V R+ G G + R +AE +
Sbjct: 1743 WTPPMEGWYKINTDGASRGNPGLASAGGVLRNSAG-AWCGGFAVNIGRCSAPLAELWGVY 1801
Query: 1661 WSLHTALEVSLDSVIFKLDSISVVKAMRTN-SSLWTIQNLM*DCIYLASLFTSISFNHVS 1719
+ L+ A L + ++DS VV ++T + L+ C S ++ +HV
Sbjct: 1802 YGLYMAWAKQLTHLELEVDSEVVVGFLKTGIGETHPLSFLVRLCHNFLSKDWTVRISHVY 1861
Query: 1720 RNANVPAHTLASLACSYNTKL 1740
R AN A LA+ A S + L
Sbjct: 1862 REANSLADGLANHAFSLSLGL 1882
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 587 bits (1512), Expect = e-167
Identities = 327/979 (33%), Positives = 519/979 (52%), Gaps = 26/979 (2%)
Query: 725 MENEFAELMGREELYWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVY 784
+++ + EE +WR +SR W+ GDKN+ FF + N + + D++GN
Sbjct: 50 LQDVLGDAYREEEDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQT 109
Query: 785 KQDQVTTAFSNYFEGIFKSSQPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQM 844
+ +FE +F SS P++++ V + ++ ++M + L ++ E+ A+ +
Sbjct: 110 VNREKGKIAVTFFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSI 169
Query: 845 HPLKAPGPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPEN 904
+ APGPDGF ALF+Q+ W LV + S + G+ P N T +CLIPK+ P
Sbjct: 170 NAESAPGPDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPAR 229
Query: 905 PMEFRPISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYM 964
+ RPISLC+V+ K+++K ++ R+K L +V QSAF+ RL++DN + E+ H +
Sbjct: 230 MADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNL 289
Query: 965 KKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVN 1024
+ K K +M K DMSKAYDR+EW FLK +L +GF S + CVSSVSYS+L+N
Sbjct: 290 RTNEKISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSVLIN 349
Query: 1025 GEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLF 1084
G+P +P RGLRQGDPLSP+LF+LC EA +++ ++ + GI+ P +NHL
Sbjct: 350 GQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEKIGKISGIQFNGTGPSVNHLL 409
Query: 1085 FADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMG 1144
FADD+L+ +A+Q E + ++ + QY SGQ++N +KS I+F V + + I NR G
Sbjct: 410 FADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKSAITFGAKVNEETKQWIMNRSG 469
Query: 1145 VKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAI 1204
++ KYLGLP SK+ +FG I+E++ +L GW KTLS+ GK+IL+K++A A
Sbjct: 470 IQTEGGTGKYLGLPECFQGSKQVLFGFIKEKLQSRLSGWYAKTLSQGGKDILLKSIAMAF 529
Query: 1205 PSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLED 1264
P Y M+CF+L +C+K+ S++ +FWW ++++KIHW Q L K G GF++L+
Sbjct: 530 PVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKKIHWIGAQKLMLPKFLGGFGFKDLQC 589
Query: 1265 FNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEE 1324
FN+ALLAKQA RL SLL ++ K++Y+ D L A G +PSYAW+S+ + +
Sbjct: 590 FNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDFLSATKGTRPSYAWQSILYGRELLVS 649
Query: 1325 GCKWSIGNGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKIDQL 1384
G K IGNG+ +W D W+ + + KVS L +WN++ + L
Sbjct: 650 GLKKIIGNGENTYVWMDNWIFDDKPRRPESLQIMVDIQLKVSQLIDPFSRNWNLNMLRDL 709
Query: 1385 FNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAY----YQIQSQKI-AATASGSN 1439
F E Q+I R +D W + G+++VKS Y Q+ Q A S
Sbjct: 710 FPWKEIQIICQQR-PMASRQDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSL 768
Query: 1440 SPSFSWKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDH 1499
+P F +W + K+K F+++V+ L RG+ I++ C++C + ET +H
Sbjct: 769 NPLFG--KIWNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEK-NETLNH 825
Query: 1500 LFLQCSWARAAWF-------HHSLGLRMDLVQTSFLEWLQSFCANQEDEIVAQVFHG--T 1550
+ QC AR W +H G D + T+ + + C N E +
Sbjct: 826 ILFQCPLARQVWALTPMQSPNHGFG---DSIFTN-VNHVIGNCHNTELSPHLRYVSPWII 881
Query: 1551 WAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQE-KRPQQWSAPSQGR 1609
W +WK RN+ LF + + + KA EW +A H C +E + W P
Sbjct: 882 WILWKNRNKRLFEGIGSVSLSIVGKALEDCKEWLKA--HELICSKEPTKDLTWIPPLMNE 939
Query: 1610 IKINVDAGWSGPHS-TGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTALE 1668
+K N+ WS H G+ +V R+ +G ++L C +Q A+ +++ + +
Sbjct: 940 LKCNIGIAWSKKHQMAGVSWVVRNWKGRVLLHSRCSFSQISSHFDAKIKGWNYAVESMDQ 999
Query: 1669 VSLDSVIFKLDSISVVKAM 1687
D V F + ++KAM
Sbjct: 1000 FKFDRVTFGASTHDIIKAM 1018
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 547 bits (1410), Expect = e-155
Identities = 387/1270 (30%), Positives = 602/1270 (46%), Gaps = 76/1270 (5%)
Query: 506 YGYPESQNKIKSWDLLVRLKGETSGPWMCFGDFNEITSNAEKKGGIDRPIEHMKKFVRCL 565
Y P + W L + GP + GDFN I E+ GG R F +
Sbjct: 7 YAAPSVSRRSGLWGELKDVVNGLEGPLLIGGDFNTILWVDERMGGNGRLSPDSLAFGDWI 66
Query: 566 NQCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHA 625
N+ L D+GF+G+ FTW GR++ + +RLDR + + W + V HL SDHA
Sbjct: 67 NELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLPFMASDHA 126
Query: 626 PLLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSGGDNAEQKLAQAKETI 685
PL + + +P+++ K +K F H+R+ E+ +A KE
Sbjct: 127 PLYVQL--EPLQQRKLRKWNREVFGD---------IHVRK---------EKLVADIKEVQ 166
Query: 686 MALETEFGSIRKKLHDLEQRLKAAQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSR 745
L +++ + + + + E ++ +EE W Q+SR
Sbjct: 167 DLLGVVL----------------------SDDLLAKEEVLLKEMDLVLEQEETLWFQKSR 204
Query: 746 ATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQ 805
+++ GD+NT+FFH R+++NRI ++ D WV + ++ Y++ ++
Sbjct: 205 EKYIELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSLE- 263
Query: 806 PNNIEEVCQKIQN----KLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQ 861
++ EV + +++ + L + FT EV A+ M KAPGPDG+ +FYQ
Sbjct: 264 --DVSEVRNMLPTGGFASISEAEKAALLQAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQ 321
Query: 862 KYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLV 921
+ W+ VG VT VLE GV PAS N + LI KV PE +FRP+SLCNV+ K++
Sbjct: 322 QCWETVGPSVTRFVLEFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKII 381
Query: 922 TKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDM 981
TK + R+K+V+ +++G Q++FIPGRL DN + E H M++K KG+KG+M LKLD+
Sbjct: 382 TKMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRK-KGRKGWMLLKLDL 440
Query: 982 SKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGD 1041
KAYDR+ WDFL++ L G T I V+ S S+L NGE + F P RGLRQGD
Sbjct: 441 EKAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGD 500
Query: 1042 PLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEAS 1101
PLSPYLF+LC+E LI + R I V+ G ++H+ FADD ++F+ A+ +
Sbjct: 501 PLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIR 560
Query: 1102 SLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVI 1161
+ V+ ++ +ASGQ V+++KS+I FS NV + I G+ KYLG+P +
Sbjct: 561 IIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQ 620
Query: 1162 GHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSK 1221
K FG++ ERV +L GWK ++LS AG+ L KAV +IP +VMS LP
Sbjct: 621 KRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDT 680
Query: 1222 IESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSE 1281
++ F WG ++K H +W+ +CK K G +G R+ D N+AL+AK WRLL +
Sbjct: 681 LDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDK 740
Query: 1282 KSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVW-----GTLKFIEEGCKWSIGNGKKV 1336
+SL +V + KY K ++ +P W S W G + + +G W G+G +
Sbjct: 741 ESLWARVVRKKY--KVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTI 798
Query: 1337 SIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKIDQLFNP--AEAQLIK 1394
W D WL + T +PE KV+ G WN+ +I L+ P + +L+
Sbjct: 799 RFWLDRWLLQEPLVELGTDMIPEGERIKVAADYWLPGSGWNL-EILGLYLPETVKRRLLS 857
Query: 1395 SIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQIQSQKIAATASGSNSPSFSWKTLWRVKIQ 1454
+ + + D++ W+ ++DG F+V+SAY +Q N SF + +W++
Sbjct: 858 VVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQGD----VGDRPNMGSF-FNRIWKLITP 912
Query: 1455 NKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQCSWARAAWFHH 1514
+V+ F++ V N+ RR + C++C+ ET H+ C W
Sbjct: 913 ERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCN-GAEETILHVLRDCPAMEPIW-RR 970
Query: 1515 SLGLRM--DLVQTSFLEWLQSFCANQEDEIVAQVFHGTWAIWKARNESLFNNVQV---HP 1569
L LR + S LEWL + + G W WK R +F ++
Sbjct: 971 LLPLRRHHEFFSQSLLEWLFTNMDPVKGIWPTLFGMGIWWAWKWRCCDVFGERKICRDRL 1030
Query: 1570 ATAMEKAQNLLAEWKEAQEHHAPCVQEKRPQQWSAPSQGRIKINVDAGWSGPHS-TGLGF 1628
+ A+ + A + V+ +R +W PS G +KI D G H G
Sbjct: 1031 KFIKDMAEEVRRVHVGAVGNRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAAAGG 1090
Query: 1629 VARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTALEVSLDSVIFKLDSISVVKAMR 1688
R+ +G L G L +AE + L A + V LD VV +
Sbjct: 1091 AIRNGQG-EWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLS 1149
Query: 1689 TN-SSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPAHTLASLACSYNTKL-WWDVPP 1746
T S+ + L+ C + + +HV R AN A LA+ A + L +D P
Sbjct: 1150 TGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFTLPLGLHCFDACP 1209
Query: 1747 PEIEQALFVD 1756
+ L D
Sbjct: 1210 EGVRLLLLAD 1219
>At3g45550 putative protein
Length = 851
Score = 546 bits (1407), Expect = e-155
Identities = 312/848 (36%), Positives = 457/848 (53%), Gaps = 36/848 (4%)
Query: 796 YFEGIFKSS----QPNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPG 851
+F IF ++ P + + + N +N E L ++F E+ A+ Q+ KAPG
Sbjct: 13 FFTDIFTTNGIQVSPIDFADFPSSVTNIINSE----LTQDFRDSEIFEAICQIGDDKAPG 68
Query: 852 PDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPI 911
PDG A FY++ W +VG DV +V S+N T IC+IPK++ P+ ++RPI
Sbjct: 69 PDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPI 128
Query: 912 SLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGK 971
+LCNV+ K+++KC+ NR+K L +V + Q+AFIPGR+I DN + E+ H +K +++
Sbjct: 129 ALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVS 188
Query: 972 KGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPF 1031
K YMA+K D+SKAYDR+EWDFL+ + GF K I V SV YS+L+NG P
Sbjct: 189 KTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYI 248
Query: 1032 SPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLI 1091
SP RG+RQGDPLSPYLFILC + S LI + ++ G+++ GAP I HL FADDSL
Sbjct: 249 SPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGNGAPAITHLQFADDSLF 308
Query: 1092 FSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVH 1151
F +A +L DV YE SGQ +N+ KS I+F V ++ ++ + +
Sbjct: 309 FCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGG 368
Query: 1152 DKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSC 1211
KYLGLP G KK +F I +RV + W K LS AGKEIL+K+VA A+P Y MSC
Sbjct: 369 GKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSC 428
Query: 1212 FKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLA 1271
FKLP GI S+IESLL NFWW + N+R I W AW+ L +K G LGFR+L FN ALLA
Sbjct: 429 FKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLA 488
Query: 1272 KQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIG 1331
KQAWR++ SL +V KA+YF ++ A Q SY W S+ + + +G ++ IG
Sbjct: 489 KQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALLRKGTRYVIG 548
Query: 1332 NGKKVSIWKDPWLPGPDSGYVRTQDVPEFAHEKVSDLRLWE----GGSWNISKIDQLFNP 1387
+GK + + D + + T + H +S L++ W+ +K+ +
Sbjct: 549 DGKTIRLGIDNVVDSHPPRPLLTDE----QHNGLSLDNLFQHRGHSRCWDNAKLQTFVDQ 604
Query: 1388 AEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYY---QIQSQKIAATASGSNSPSFS 1444
++ IK I LS R D+LIW ++ G ++V+S Y+ S I A S
Sbjct: 605 SDHDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLK 664
Query: 1445 WKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVETQDHLFLQC 1504
K +W + I K+KHF++R+++ P L RG++I C C ++ E+ +H C
Sbjct: 665 TK-IWNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRE-NESINHALFTC 722
Query: 1505 SWARAAWFHHSLGLRMDLVQTSFLE--------WLQSFCANQEDEIVAQVFHGTWAIWKA 1556
+A AW L + ++ +E LQ+ +++ F W IWKA
Sbjct: 723 PFATMAWRLSDTPLYRSSILSNNIEDNISNILLLLQNTTITDSQKLIP--FWLLWRIWKA 780
Query: 1557 RNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQEKRP-----QQWSAPSQGRIK 1611
RN +FNN++ P+ + +A+ EW A + P KR W P IK
Sbjct: 781 RNNVVFNNLRESPSITVVRAKAETNEWLNATQTQGPRRLPKRTTAAGNTTWVKPQMPYIK 840
Query: 1612 INVDAGWS 1619
N DA ++
Sbjct: 841 CNFDASFN 848
>At2g11240 pseudogene
Length = 1044
Score = 517 bits (1331), Expect = e-146
Identities = 277/816 (33%), Positives = 445/816 (53%), Gaps = 16/816 (1%)
Query: 567 QCGLEDMGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAP 626
+C L D+ G+ +W G++ + + RLDR + + ++ E +PAS +L SDH P
Sbjct: 3 ECDLYDLRHSGNFLSW-RGKRHDHVVHCRLDRALSNGAWAEDYPASRCIYLCFEGSDHRP 61
Query: 627 LLITVTSQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQS-GGDNAEQKLAQAKETI 685
LL + KKKKK +FR+++ L N E+ +++AW D E+K+++ + I
Sbjct: 62 LLTH-----FDLSKKKKKGVFRYDRRLKNNDEVTALVQEAWNLYDTDIVEEKISRCRLEI 116
Query: 686 MALETEFGSIRKKLHDLEQRLKAAQKWNPTEENIMRRKEMENEFAELMGREELYWRQRSR 745
+ +KL + E R K + + + N + EE YW+QRSR
Sbjct: 117 VKWSRAKQQSSQKLIE-ENRQKLEEAMSSQDHNQELLSTINTNLLLAYKAEEEYWKQRSR 175
Query: 746 ATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQ 805
WL GDKN+ +FH R N+ + I + G Y++ + S YF+ +F +++
Sbjct: 176 QLWLALGDKNSGYFHAITRGRTVINKFSVIEKEDGVPEYEEAGILNVISEYFQKLFSANE 235
Query: 806 PNNIEEVCQKIQNKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWK 865
+ + I+ ++ E +E+ A +H KAPGPDGF A F+Q W
Sbjct: 236 GARAATIKEAIKPFISPEQNP--------EEIKSACFSIHADKAPGPDGFSASFFQSNWM 287
Query: 866 LVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCI 925
VG ++ ++ + ++N+T I LIPK+++ + +++RPI+LC V K+++K +
Sbjct: 288 TVGPNIVLEIQSFFSSSTLQPTINKTHITLIPKIQSLKRMVDYRPIALCTVFYKIISKLL 347
Query: 926 ANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAY 985
+ R++ +L E++ E QSAF+P R DN L E HY+K K+ +MA+K +MSKAY
Sbjct: 348 SRRLQPILQEIISENQSAFVPKRASNDNVLITHEALHYLKSLGAEKRCFMAVKTNMSKAY 407
Query: 986 DRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSP 1045
DRIEWDF+K V+ MGF I C+++VSYS L+NG +P+RGLRQGDPLSP
Sbjct: 408 DRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQGAVTPERGLRQGDPLSP 467
Query: 1046 YLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLD 1105
+LFI+C E SGL +L G++V++G P +NHL FADD++ F R+ + + L
Sbjct: 468 FLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDTIFFCRSDLKSCKTFLC 527
Query: 1106 VIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSK 1165
++++YE+ASGQ++N KS I+FSR P + +G++ V KYLGLP + G K
Sbjct: 528 ILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGKYLGLPKMFGRKK 587
Query: 1166 KAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESL 1225
+ +F +I +R+ ++ W + LS AGK ++K+V ++P+Y MSCFKL +C +I+S
Sbjct: 588 RDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFKLLVSLCKRIQSA 647
Query: 1226 LANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLL 1285
L +FWW +++K+ W AW + K K G LGF+++ +FN ALLAK +WR++ S +L
Sbjct: 648 LTHFWWDSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFNDALLAKLSWRIVQSPSCVL 707
Query: 1286 YKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLP 1345
++ KY L V S+ WR + I+ IG+G +W +PWL
Sbjct: 708 VRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEPWLS 767
Query: 1346 GPDSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKI 1381
S + +F V+ L SW+ K+
Sbjct: 768 LSTSSTPMGPALEQFKSMTVAQLICQTTKSWDREKV 803
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 7/187 (3%)
Query: 1551 WAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQEKRPQQWSAPSQ--- 1607
W +W RN+ +F + + ++ + EW AQ + K +PS+
Sbjct: 850 WNLWNCRNKLIFEQKHISSMDLISQSISQSTEWLGAQ---IQASKSKIVIPGISPSEIDL 906
Query: 1608 GRIKINVDAGW-SGPHSTGLGFVARDHRGIIMLAGTCLEAQRLDPLIAEAMALRWSLHTA 1666
I+ + DA W G G+V DH + PL+A+A AL ++ A
Sbjct: 907 DTIQCSTDASWREETLQAGFGWVFVDHSNHLESHHKAAAMNIRSPLLAKASALSLAIQHA 966
Query: 1667 LEVSLDSVIFKLDSISVVKAMRTNSSLWTIQNLM*DCIYLASLFTSISFNHVSRNANVPA 1726
++ ++ DS +VK + + ++ D L+ F SF+ V R N A
Sbjct: 967 ADLGFKKLVVASDSQQLVKVLNGEPHPMELHGIVFDISVLSLNFEENSFSFVKRENNSKA 1026
Query: 1727 HTLASLA 1733
LA A
Sbjct: 1027 DALAKAA 1033
>At4g15590 reverse transcriptase like protein
Length = 929
Score = 462 bits (1189), Expect = e-130
Identities = 297/921 (32%), Positives = 461/921 (49%), Gaps = 66/921 (7%)
Query: 573 MGFQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLITVT 632
MGF+G+ FTW G + + +RLDR + + W + +
Sbjct: 1 MGFKGNRFTWRRGLVESTFVAKRLDRVLFCAHARLKWQEA----------------LLCP 44
Query: 633 SQPIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAWQSGGDNAEQKLAQAKETIMALETE- 691
+Q ++ +++ FRFE L+HE L A G + L + + + E
Sbjct: 45 AQNVDA----RRRPFRFEA-AWLSHEGFKELLTASWDTGLSTPVALNRLRWQLKKWNKEV 99
Query: 692 FGSIRKKLHDLEQRLKAAQ---KWNPTEENIMRRKEMENEFAELMGREELYWRQRSRATW 748
FG+I + + LKA Q + T++ +M+ + EF L+ +EE W Q+SR
Sbjct: 100 FGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWFQKSREKL 159
Query: 749 LKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFEGIFKSSQPNN 808
L GD+NT+FFH R+++NRI ++D WV +++ + +Y+ ++ +
Sbjct: 160 LALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVSV 219
Query: 809 IEEVCQKIQ-NKLNQEMREHLEEEFTADEVAYALNQMHPLKAPGPDGFPALFYQKYWKLV 867
+ +L +E + +L FT DEV A+ M KAPGPDG+ +FYQ+ W+ V
Sbjct: 220 VRGTLPTEGFPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKAPGPDGYQPVFYQQCWETV 279
Query: 868 GGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRPISLCNVIMKLVTKCIAN 927
G V+ V+E GV P S N + L+ KV PE +FRP+SLCNV+ K++TK +
Sbjct: 280 GESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVI 339
Query: 928 RIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDR 987
R+K+V+ +++G Q++FIPGRL DN + E H M++K KG+KG+M LKLD+ KAYDR
Sbjct: 340 RLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRK-KGRKGWMLLKLDLEKAYDR 398
Query: 988 IEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYL 1047
I WDFL + L G + I CV+ SLL NGE + F+P+RGLRQGDP+SPYL
Sbjct: 399 IRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYL 458
Query: 1048 FILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVI 1107
F+LC+E I + + I +++G P ++H+ FADD ++F+ A+
Sbjct: 459 FVLCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCFADDLILFAEASV---------- 508
Query: 1108 RQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKA 1167
Q V+++KS+I FS NV + I G+ + KYLG+P + K
Sbjct: 509 -------AQKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKD 561
Query: 1168 IFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLA 1227
FG++ ERV +L GWK ++LS AG+ L KAV +IP + MS LP + +++ +
Sbjct: 562 TFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSR 621
Query: 1228 NFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYK 1287
NF WG +RK H +W+ +C+ K G LG R +D NRALLAK WRLLN + SL +
Sbjct: 622 NFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWAR 681
Query: 1288 VWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLPGP 1347
V + KY K + P W S W SIG G + + K L P
Sbjct: 682 VLRRKY--KVTDVHDSSWLVPKATWSSTWR-----------SIGVGLREGVAKGWILHEP 728
Query: 1348 DSGYVRTQDVPEFAHEKVSDLRLW-EGGSWNISKIDQLFNPAEAQLIKSIRLSW-RDSED 1405
PE + +V + W EG W++ K+ Q + + ++ + D
Sbjct: 729 LCTRATCLLSPEELNARVEE--FWTEGVGWDMVKLGQCLPRSVTDRLHAVVIKGVLGLRD 786
Query: 1406 KLIWRWSRDGMFSVKSAYYQIQSQKIAATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVI 1465
++ W+ + DG F+V SAY + ++ + S +K +W V +V+ F++ V
Sbjct: 787 RISWQGTSDGDFTVGSAYVLLTQEEESKPCMES-----FFKRIWGVIAPERVRVFLWLVG 841
Query: 1466 NNLTPCRANLARRGIQIQEQC 1486
+ RR I E C
Sbjct: 842 QQVIMTNVERVRRHIGDIEVC 862
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 449 bits (1155), Expect = e-126
Identities = 252/662 (38%), Positives = 372/662 (56%), Gaps = 18/662 (2%)
Query: 949 LITDNALTGFEVFHYMKKKRKGKKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITE 1008
+ITDN L E+ H + K K + ++A KLD++KA+D+IEW F++ ++ MGF K
Sbjct: 1 MITDNILIAHELIHSLHTK-KLVQPFVATKLDITKAFDKIEWGFIEAIMKQMGFSEKWCN 59
Query: 1009 LISICVSSVSYSLLVNGEPSPPFSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNL 1068
I C+++ +YS+L+NG+P P+RG+RQGDP+SPYL++LC E S LI I+ + L
Sbjct: 60 WIMTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQL 119
Query: 1069 HGIKVARGAPPINHLFFADDSLIFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFS 1128
HG K +R P I+HL FA DSL+F +AT EE +L++V++ YE+ASGQ VN KS I F
Sbjct: 120 HGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFG 179
Query: 1129 RNVPQTSMDTIRNRMGVKAVIVHDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTL 1188
+ + + + + +G+ +YLGLP +G +K F I + + +K+ W K L
Sbjct: 180 KGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLL 239
Query: 1189 SKAGKEILIKAVAQAIPSYVMSCFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHL 1248
S AGKE+LIK++ AIP+Y MSCF LP + +I S + FWW + + KI W AW L
Sbjct: 240 SPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKL 299
Query: 1249 CKTKNRGDLGFRNLEDFNRALLAKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQP 1308
K G L R+L+DFN ALLAKQ+WR+L SL+ +V+KAKYFPK LL A Q
Sbjct: 300 NDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQS 359
Query: 1309 SYAWRSVWGTLKFIEEGCKWSIGNGKKVSIWKDPWLP-GPDSGYVRTQDVPEFAHEKVSD 1367
SYAW+S+ K I G K+ GNG + +WKD WLP P V T D ++ KVSD
Sbjct: 360 SYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCD-SIYSQLKVSD 418
Query: 1368 LRLWEGGSWNISKIDQLFNPAEAQLIKSIRLSWRDSEDKLIWRWSRDGMFSVKSAYYQI- 1426
L + G WN + +L + + I++IR S + D + W ++ DG +SVKS Y+ +
Sbjct: 419 LLI--EGRWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLR 476
Query: 1427 ---QSQKIAATASGSNSPSFSWKTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQ 1483
Q Q + + S + +W+ K+KHF +R +N P NL RR +
Sbjct: 477 KLSQQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITD 536
Query: 1484 EQCALCSQDVVETQDHLFLQCSWARAAW--FHHSLGLRMDLVQTSF---LEWLQSFCANQ 1538
+ C C + E +HL QC ++ W H L L+ SF LE +Q +
Sbjct: 537 DTCQRCG-EASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSA 595
Query: 1539 EDEIVAQVFHGTWAIWKARNESLFNNVQVHPATAMEKAQNLLAEWKEAQEHHAPCVQEKR 1598
++ F G W IWK RN+ +FNN + +++KA +WKE+ + Q+++
Sbjct: 596 RKDVSLFPFIG-WRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLNCNEQ--QQRK 652
Query: 1599 PQ 1600
PQ
Sbjct: 653 PQ 654
>At1g25430 hypothetical protein
Length = 1213
Score = 385 bits (989), Expect = e-106
Identities = 331/1223 (27%), Positives = 537/1223 (43%), Gaps = 103/1223 (8%)
Query: 402 WNCRGVGSPRTVKVLQRIIKAEDPDIVFLMETHKKNGELKNIVARLGFKNHLGVECRGEG 461
WN RG + ++ +KA P ++ETH K + + + L VE
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINAL-LPGWSFVE--NYA 64
Query: 462 RSSGGGLALLWKEDFNIDIISYSLHHITASHTNADQITCFLTGF-YGYPESQNKIKSWDL 520
S G + ++W + +++ SL IT + + Y E ++ + W
Sbjct: 65 FSDLGKIWVMWDPSVQVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKELWIE 124
Query: 521 LVRLKGETSG-----PWMCFGDFNEITSNAEKKGGIDRPIE-HMKKFVRCLNQCGLEDMG 574
+V + SG PW+ GDFN++ + E + ++ +M+ F CL L D+
Sbjct: 125 IVNMV--VSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLR 182
Query: 575 FQGDPFTWCNGRKDEAHIQERLDRGVISQSFKEIWPASSVQHLLRYNSDHAPLLITVTSQ 634
++G+ FTW N + + +++DR +++ S+ ++P+S SDH +
Sbjct: 183 YKGNTFTWWN-KSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVV---- 237
Query: 635 PIEEGKKKKKKLFRFEQHLTLNHELAFHLRQAW------QSGGDNAEQKLAQAKETIMAL 688
+EE K K+ F+F +L N + +R W S +KL K+ I
Sbjct: 238 -LEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDF 296
Query: 689 ETEFGSIRKKLHDLEQRLKAAQKW----------NPTEENIMRRKEMENEFAELMGREEL 738
R +LE+R K A + +PT N E E ++ L EE
Sbjct: 297 S------RLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEES 350
Query: 739 YWRQRSRATWLKEGDKNTSFFHGKANQRQKQNRIARIRDDHGNWVYKQDQVTTAFSNYFE 798
++RQ+SR +W EGD NT +FH A+ R N I+ + D +G V Q+ + ++YF
Sbjct: 351 FFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFG 410
Query: 799 GIFKSSQPNNIEEVCQKIQNKLNQEMREH--------LEEEFTADEVAYALNQMHPLKAP 850
+ + E QN +N + LE F+ +++ AL + K+
Sbjct: 411 SLLGDEVDPYLME-----QNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSC 465
Query: 851 GPDGFPALFYQKYWKLVGGDVTSQVLEILNKGVDPASLNQTFICLIPKVKAPENPMEFRP 910
GPDGF A F+ W +VG +VT + E + G N T I LIPK+ P +FRP
Sbjct: 466 GPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRP 525
Query: 911 ISLCNVIMKLVTKCIANRIKDVLGEVVGEQQSAFIPGRLITDNALTGFEVFHYMKKKRKG 970
IS N + K++ + + +R++ +L V+ QSAF+PGR + +N L ++ H
Sbjct: 526 ISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNIS 585
Query: 971 KKGYMALKLDMSKAYDRIEWDFLKQVLTTMGFPSKITELISICVSSVSYSLLVNGEPSPP 1030
+G LK+D+ KA+D + W+F+ L + P K IS C+S+ ++++ +NG
Sbjct: 586 PRG--MLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGF 643
Query: 1031 FSPQRGLRQGDPLSPYLFILCVEAFSGLISNQIRLRNLHGIKVARGAPPINHLFFADDSL 1090
F +GLRQGDPLSPYLF+L +EAFS L+ ++ +H A I+HL FADD +
Sbjct: 644 FKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNL-SISHLMFADDVM 702
Query: 1091 IFSRATQEEASSLLDVIRQYEQASGQLVNMDKSEISFSRNVPQTSMDTIRNRMGVKAVIV 1150
IF + + + + SG VN DKS + + + Q + G +
Sbjct: 703 IFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHL-YLAGLNQLESNA-NAAYGFPIGTL 760
Query: 1151 HDKYLGLPTVIGHSKKAIFGKIQERVWRKLKGWKEKTLSKAGKEILIKAVAQAIPSYVMS 1210
+YLGLP + + A + + E++ + + W K LS AG+ LI +V ++ MS
Sbjct: 761 PIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMS 820
Query: 1211 CFKLPNGICSKIESLLANFWWGQKENERKIHWAAWQHLCKTKNRGDLGFRNLEDFNRALL 1270
F LP G +IESL + F W + K +W LC K+ G LG R L ++N+ L
Sbjct: 821 TFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLS 880
Query: 1271 AKQAWRLLNSEKSLLYKVWKAKYFPKCDLLKAGVGYQPSYAWRSVWGTLKFIEEGCKWSI 1330
+ WRL ++ SL + + G S+ W+ + + +
Sbjct: 881 MRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKV 940
Query: 1331 GNGKKVSIWKDPWLP-GP------DSGYVRTQDVPEFAHEKVSDLRLWEGGSWNISKIDQ 1383
GNG K W D W GP D G + VP A KV+ +G +S+
Sbjct: 941 GNGLKADYWYDNWTSLGPLFRIIGDIG-PSSLRVPLLA--KVASAFSEDGWRLPVSR--- 994
Query: 1384 LFNPAEA--QLIKSIRLSWRDSEDKLIWRWSRDGM----FSVKSAYYQIQSQKIAATASG 1437
PA+ + ++ + ED + WS +G FS + I+ + AT
Sbjct: 995 -SAPAKGIHDHLCTVPVPSTAQEDVDRYEWSVNGFLCQGFSAAKTWEAIRPK---ATVK- 1049
Query: 1438 SNSPSFSW-KTLWRVKIQNKVKHFMYRVINNLTPCRANLARRGIQIQEQCALCSQDVVET 1496
SW ++W K M+ N R LA G + C LCS E+
Sbjct: 1050 ------SWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCS-FASES 1102
Query: 1497 QDHLFLQCSWARAAWFHHSLGLRMDLVQTSFLEW--LQSFCANQEDE-------IVAQVF 1547
+DHL L C ++ W + R+ Q F W L S+ E IV+QV
Sbjct: 1103 RDHLLLICEFSAQVW--RLVFRRICPRQRLFSSWSELLSWVRQSSPEAPPLLRKIVSQVV 1160
Query: 1548 HGTWAIWKARNESLFNNVQVHPA 1570
+ +W+ RN L N++++ PA
Sbjct: 1161 --VYNLWRQRNNLLHNSLRLAPA 1181
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.329 0.141 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,824,885
Number of Sequences: 26719
Number of extensions: 1780334
Number of successful extensions: 5742
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5114
Number of HSP's gapped (non-prelim): 286
length of query: 1758
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1645
effective length of database: 8,299,349
effective search space: 13652429105
effective search space used: 13652429105
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0191.8