BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0178.14
(599 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45550 putative protein 150 1e-36
At2g31520 putative non-LTR retroelement reverse transcriptase 149 4e-36
At2g25550 putative non-LTR retroelement reverse transcriptase 149 4e-36
At4g10830 putative protein 149 6e-36
At2g15540 putative non-LTR retroelement reverse transcriptase 147 2e-35
At2g17910 putative non-LTR retroelement reverse transcriptase 145 5e-35
At2g45230 putative non-LTR retroelement reverse transcriptase 144 1e-34
At1g47910 reverse transcriptase, putative 134 2e-31
At4g04000 putative reverse transcriptase 133 2e-31
At1g24640 hypothetical protein 132 4e-31
At4g09710 RNA-directed DNA polymerase -like protein 131 1e-30
At3g32110 non-LTR reverse transcriptase, putative 130 2e-30
At2g01840 putative non-LTR retroelement reverse transcriptase 130 2e-30
At2g07650 putative non-LTR retrolelement reverse transcriptase 129 5e-30
At2g41580 putative non-LTR retroelement reverse transcriptase 127 1e-29
At2g31080 putative non-LTR retroelement reverse transcriptase 127 2e-29
At4g15590 reverse transcriptase like protein 126 3e-29
At2g01550 putative non-LTR retroelement reverse transcriptase 126 4e-29
At3g31420 hypothetical protein 125 9e-29
At3g25485 unknown protein 125 9e-29
>At3g45550 putative protein
Length = 851
Score = 150 bits (380), Expect = 1e-36
Identities = 70/155 (45%), Positives = 102/155 (65%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDGL FYK WD V + + FF + H+ + +N T + +IPK+ NP++++
Sbjct: 65 KAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSD 124
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
YRPI+ CN YKVIS+ +V RLK LN +++ +Q+AFI ++I DN+MIA E H++ +
Sbjct: 125 YRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVR 184
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLEKNPPCFRF 590
R SK ++A+K D+SKAY+RVEW FLE F F
Sbjct: 185 KRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGF 219
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 149 bits (376), Expect = 4e-36
Identities = 74/156 (47%), Positives = 103/156 (65%), Gaps = 2/156 (1%)
Query: 436 KFEGPDGLNGLFYKNHWDTV-HEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESIT 494
K GPDGL FYKN WD V ++V E + FF T + IN T + +IPK+ NP +++
Sbjct: 600 KAPGPDGLTARFYKNCWDIVGYDVILEV-KKFFETSFMKPSINHTNICMIPKITNPTTLS 658
Query: 495 HYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILR 554
YRPI+ CN YKVIS+ +V RLK LN +++ +Q+AFI ++I DN+MIA E H++
Sbjct: 659 DYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKV 718
Query: 555 KGRASKEHVALKLDMSKAYERVEWSFLEKNPPCFRF 590
+ R SK ++A+K D+SKAY+RVEW FLE F F
Sbjct: 719 RKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGF 754
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 149 bits (376), Expect = 4e-36
Identities = 74/156 (47%), Positives = 103/156 (65%), Gaps = 2/156 (1%)
Query: 436 KFEGPDGLNGLFYKNHWDTV-HEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESIT 494
K GPDGL FYKN WD V ++V E + FF T + IN T + +IPK+ NP +++
Sbjct: 826 KAPGPDGLTARFYKNCWDIVGYDVILEV-KKFFETSFMKPSINHTNICMIPKITNPTTLS 884
Query: 495 HYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILR 554
YRPI+ CN YKVIS+ +V RLK LN +++ +Q+AFI ++I DN+MIA E H++
Sbjct: 885 DYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKV 944
Query: 555 KGRASKEHVALKLDMSKAYERVEWSFLEKNPPCFRF 590
+ R SK ++A+K D+SKAY+RVEW FLE F F
Sbjct: 945 RKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGF 980
>At4g10830 putative protein
Length = 1294
Score = 149 bits (375), Expect = 6e-36
Identities = 68/155 (43%), Positives = 104/155 (66%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDGL FYK+ W+ V + + FF T ++ IN T + +IPK+ NPE+++
Sbjct: 806 KAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSD 865
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
YRPI+ CN YK+IS+ +V RLKG L+ +++ +Q+AFI +++ DN+MIA E H++ +
Sbjct: 866 YRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTR 925
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLEKNPPCFRF 590
R S+ ++A+K D+SKAY+RVEW+FLE F F
Sbjct: 926 KRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGF 960
>At2g15540 putative non-LTR retroelement reverse transcriptase
Length = 1225
Score = 147 bits (371), Expect = 2e-35
Identities = 69/148 (46%), Positives = 98/148 (65%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P K GPDG+ FY+++WD + ++F STG ++NET + LIPK P +
Sbjct: 389 PDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPRKM 448
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
+RPIS CN +YKVIS+++ +RLK L +LI+ QSAF+ ++I DNI+IAQE FH +
Sbjct: 449 AEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFHALR 508
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFL 581
K+++A+K DMSKAY+RVEWSFL
Sbjct: 509 TNPACKKKYMAIKTDMSKAYDRVEWSFL 536
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 145 bits (367), Expect = 5e-35
Identities = 68/144 (47%), Positives = 92/144 (63%)
Query: 439 GPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITHYRP 498
GPDG LF++ HWD V FF TG LP N T + LIPK+ +P+ ++ RP
Sbjct: 425 GPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRP 484
Query: 499 ISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRKGRA 558
IS C+ YK+IS+I+ RLK L +++ QSAF+ ++I DNI++A E H++ R
Sbjct: 485 ISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTNDRI 544
Query: 559 SKEHVALKLDMSKAYERVEWSFLE 582
SKEH+A K DMSKAY+RVEW FLE
Sbjct: 545 SKEHMAFKTDMSKAYDRVEWPFLE 568
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 144 bits (364), Expect = 1e-34
Identities = 67/150 (44%), Positives = 98/150 (64%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P K GPDG+NG Y+ W+T+ + E ++FF +G + +N+T + LIPK+ E +
Sbjct: 442 PHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKM 501
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
T +RPIS CN YKVI +++ RLK L LI+ Q+AF+ ++I DNI+IA E H +
Sbjct: 502 TDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALS 561
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFLEK 583
+ S+E +A+K D+SKAY+RVEW FLEK
Sbjct: 562 SNNKCSEEFIAIKTDISKAYDRVEWPFLEK 591
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 134 bits (336), Expect = 2e-31
Identities = 65/149 (43%), Positives = 88/149 (58%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P K GPDG+ LF++ W + SF G ++N T + LIPK P +
Sbjct: 226 PEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRM 285
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
T RPIS CN YKVIS+I+ RLK L LI+ QSAF+ ++I DNI+IAQE FH +
Sbjct: 286 TELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLR 345
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFLE 582
+ +A+K DMSKAY++VEW+F+E
Sbjct: 346 TNSSCKDKFMAIKTDMSKAYDQVEWNFIE 374
>At4g04000 putative reverse transcriptase
Length = 1077
Score = 133 bits (335), Expect = 2e-31
Identities = 62/149 (41%), Positives = 96/149 (63%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P K G DG + F++++W TV E ++FF + LP KIN T V LIPK+P P+ +
Sbjct: 418 PDKAPGRDGFSASFFQSNWSTVSEEITAEVQAFFISEILPQKINHTHVRLIPKIPAPQKV 477
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
+ YRPI+ C+ YK+I++++ RL+ L+ I+ NQSAF+ + I DN++I EA H +
Sbjct: 478 SDYRPIALCSVYYKIIAKLLAKRLQPILHSCISENQSAFVPQRAISDNVLITHEALHYLK 537
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFLE 582
G ++A+K DMSKAY+R+EW F++
Sbjct: 538 NSGALVNCYMAVKTDMSKAYDRLEWDFVK 566
>At1g24640 hypothetical protein
Length = 1270
Score = 132 bits (333), Expect = 4e-31
Identities = 62/148 (41%), Positives = 96/148 (63%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P GPDG++ LF++++W TV + FF+ G +P++ N T + LIPK +P +
Sbjct: 405 PASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEM 464
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
RPIS C+ YK+IS+I+ RL+ L ++++ QSAF+ ++I DNI++A E H++
Sbjct: 465 VDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLK 524
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFL 581
R S E +A+K DMSKAY+RVEWS+L
Sbjct: 525 VHPRISSEFMAVKSDMSKAYDRVEWSYL 552
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 131 bits (329), Expect = 1e-30
Identities = 61/148 (41%), Positives = 94/148 (63%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG + F+ +WD + RSFF L ++NET VTLIPK+ P ++
Sbjct: 385 KAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKISAPRKVSD 444
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
YRPI+ CN YK++++I+ RL+ L++LI+L+QSAF+ + I DN++I E H +
Sbjct: 445 YRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILHFLRVS 504
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLEK 583
G +A+K DMSKAY+R++W+FL++
Sbjct: 505 GAKKYCSMAIKTDMSKAYDRIKWNFLQE 532
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 130 bits (327), Expect = 2e-30
Identities = 64/147 (43%), Positives = 93/147 (62%), Gaps = 1/147 (0%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG +FY+ W+ V E + FFS+G P + N+ +V LI KV PE IT
Sbjct: 984 KAPGPDGFQPVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVLKPEKITQ 1043
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
+RPIS CN +K I++++V RLKG +N+LI Q++FI ++ DNI++ QE H++ RK
Sbjct: 1044 FRPISLCNVLFKTITKVMVGRLKGVINKLIGPAQTSFIPGRLSTDNIVVVQEVVHSMRRK 1103
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLE 582
+ K + LKLD+ KAY+R+ W LE
Sbjct: 1104 -KGVKGWMLLKLDLEKAYDRIRWDLLE 1129
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 130 bits (327), Expect = 2e-30
Identities = 60/145 (41%), Positives = 95/145 (65%)
Query: 439 GPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITHYRP 498
G DG FY + WD + C R FF + + ++IN+T + LIPK+ +P+ ++ YRP
Sbjct: 809 GFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRP 868
Query: 499 ISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRKGRA 558
IS C +YK+IS+I++ RLK L +I+ +Q+AF+ + I DN+++A E H++ +
Sbjct: 869 ISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRREC 928
Query: 559 SKEHVALKLDMSKAYERVEWSFLEK 583
+VA+K D+SKAY+RVEW+FLEK
Sbjct: 929 QSGYVAVKTDISKAYDRVEWNFLEK 953
>At2g07650 putative non-LTR retrolelement reverse transcriptase
Length = 732
Score = 129 bits (324), Expect = 5e-30
Identities = 65/147 (44%), Positives = 93/147 (63%), Gaps = 1/147 (0%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG +FY++ WD V + FF++G LP N+ +V LI KV PE IT
Sbjct: 5 KAPGPDGFQPVFYQDCWDIVGDSVSRFVLDFFASGKLPEGTNDAIVVLIAKVLKPERITQ 64
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
+RPIS CN +K I++ +V RLK +++LI Q++FI ++ DNI+I QEA H++ RK
Sbjct: 65 FRPISLCNVLFKTITKTLVMRLKRVISKLIRPAQASFISGRLAADNIVIMQEAVHSMRRK 124
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLE 582
+ K + LKLD+ KAY+R+ W FLE
Sbjct: 125 -KGRKGWMLLKLDLEKAYDRIRWEFLE 150
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 127 bits (320), Expect = 1e-29
Identities = 61/144 (42%), Positives = 85/144 (58%)
Query: 439 GPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITHYRP 498
GPDG LF++ W V FF TG LP N T + LIPK+ P + RP
Sbjct: 176 GPDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRP 235
Query: 499 ISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRKGRA 558
IS C+ YK+IS+I+ RLK L +++ QSAF+ +++ DNI++A E HN+ +
Sbjct: 236 ISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEKI 295
Query: 559 SKEHVALKLDMSKAYERVEWSFLE 582
SK+ + K DMSKAY+RVEW FL+
Sbjct: 296 SKDFMVFKTDMSKAYDRVEWPFLK 319
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 127 bits (319), Expect = 2e-29
Identities = 63/148 (42%), Positives = 95/148 (63%), Gaps = 1/148 (0%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG +FY+ W+TV FF TG LP+ N+ ++ LI KV PE I
Sbjct: 308 KAPGPDGYQPVFYQQCWETVGPSVTRFVLEFFETGVLPASTNDALLVLIAKVAKPERIQQ 367
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
+RP+S CN +K+I++++VTRLK +++LI Q++FI ++ DNI++ QEA H++ RK
Sbjct: 368 FRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRK 427
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLEK 583
+ K + LKLD+ KAY+RV W FL++
Sbjct: 428 -KGRKGWMLLKLDLEKAYDRVRWDFLQE 454
>At4g15590 reverse transcriptase like protein
Length = 929
Score = 126 bits (317), Expect = 3e-29
Identities = 61/146 (41%), Positives = 94/146 (63%), Gaps = 1/146 (0%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG +FY+ W+TV E + FF +G LP N+ ++ L+ KV PE IT
Sbjct: 260 KAPGPDGYQPVFYQQCWETVGESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQ 319
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
+RP+S CN +K+I++++V RLK +++LI Q++FI ++ DNI++ QEA H++ RK
Sbjct: 320 FRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRK 379
Query: 556 GRASKEHVALKLDMSKAYERVEWSFL 581
+ K + LKLD+ KAY+R+ W FL
Sbjct: 380 -KGRKGWMLLKLDLEKAYDRIRWDFL 404
>At2g01550 putative non-LTR retroelement reverse transcriptase
Length = 1449
Score = 126 bits (316), Expect = 4e-29
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 8/150 (5%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG FYK WD + F A +SFF G LP +N T++ LIPK + +
Sbjct: 884 KSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMKD 943
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEA---FHNI 552
YRPISCCN YKVIS+II RLK L I NQSAF+ +++ +N+++A E +H
Sbjct: 944 YRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKD 1003
Query: 553 LRKGRASKEHVALKLDMSKAYERVEWSFLE 582
GR A+K+D+SKA++ V+WSFL+
Sbjct: 1004 TISGRC-----AIKIDISKAFDSVQWSFLK 1028
>At3g31420 hypothetical protein
Length = 1491
Score = 125 bits (313), Expect = 9e-29
Identities = 59/150 (39%), Positives = 91/150 (60%)
Query: 434 PRKFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESI 493
P + PDG FY+ W + + + FF L + N T + LIPKV P +I
Sbjct: 627 PSRTPDPDGFTADFYQQFWPDIKQKVIDEVTRFFERSELDERHNHTNLCLIPKVETPTTI 686
Query: 494 THYRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNIL 553
+RPI+ CN +YK+IS+I+V RLK L IT NQ+AF+ ++I +N +IA E ++ +
Sbjct: 687 AKFRPIALCNVSYKIISKILVNRLKKHLGGAITENQAAFVPGRLITNNAIIAHEVYYALK 746
Query: 554 RKGRASKEHVALKLDMSKAYERVEWSFLEK 583
+ R + ++ALK D++KAY+R+EW FLE+
Sbjct: 747 ARKRQANSYMALKTDITKAYDRLEWDFLEE 776
>At3g25485 unknown protein
Length = 979
Score = 125 bits (313), Expect = 9e-29
Identities = 63/147 (42%), Positives = 91/147 (61%), Gaps = 2/147 (1%)
Query: 436 KFEGPDGLNGLFYKNHWDTVHEVFCEAARSFFSTGHLPSKINETVVTLIPKVPNPESITH 495
K GPDG FYK W+ + F A +SFF G LP +N T++ LIPK + +
Sbjct: 385 KSPGPDGFTTEFYKATWEIIGAEFIVAVKSFFEKGFLPKGVNSTILALIPKKFETKEMKD 444
Query: 496 YRPISCCNFTYKVISRIIVTRLKGGLNQLITLNQSAFIGVKMIQDNIMIAQEAFHNILRK 555
YRPISCCN YKVIS++I RLK L Q I NQSAF+ +++ N+++A E + ++
Sbjct: 445 YRPISCCNVIYKVISKLIAKRLKEILPQFIAGNQSAFVKDRLLIQNLLLATEIVKDYHKE 504
Query: 556 GRASKEHVALKLDMSKAYERVEWSFLE 582
+ + A+K+D+SKA++ V+WSFLE
Sbjct: 505 --SVSDRCAIKIDISKAFDSVQWSFLE 529
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.350 0.155 0.548
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,774,572
Number of Sequences: 26719
Number of extensions: 440053
Number of successful extensions: 1569
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1472
Number of HSP's gapped (non-prelim): 73
length of query: 599
length of database: 11,318,596
effective HSP length: 105
effective length of query: 494
effective length of database: 8,513,101
effective search space: 4205471894
effective search space used: 4205471894
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0178.14