BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0176a.2
         (342 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g16560 Unknown protein                                             532  e-152
At5g62130 unknown protein                                             366  e-101
At3g19260 longevity factor like protein                                30  1.5
At5g16340 AMP-binding protein                                          28  5.5
At5g57810 unknown protein                                              28  7.2
At4g28680 aromatic amino-acid decarboxylase - like protein             28  7.2
At3g06570 unknown protein                                              28  9.5

>At1g16560 Unknown protein
          Length = 342

 Score =  532 bits (1371), Expect = e-152
 Identities = 242/338 (71%), Positives = 276/338 (81%), Gaps = 4/338 (1%)

Query: 5   YVFAFLLVLSWSVEVIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRP 64
           Y  A  L+L     + +ASAGD DP YR C+ +C+ +GCV Q CFP C   SDG     P
Sbjct: 5   YWTALFLLLPCLFCISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGG----P 60

Query: 65  WYMQEPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASV 124
           WY+QEPLYLQWKKW CQ DCRY CM++RE ER+ L   PVKYHGKWPF R+ G+QE ASV
Sbjct: 61  WYIQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASV 120

Query: 125 AFSALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHS 184
           AFS LNLAMHFHGW+SFFI++YYKLPLK  + AYYEY GLWHIYGLLS+NSWFWSAVFHS
Sbjct: 121 AFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHS 180

Query: 185 RDVDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYK 244
           RDVDLTE LDYSSAV +LG+SLILAILR+F++R EA RVMVSAP++AFV TH++YINFYK
Sbjct: 181 RDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYK 240

Query: 245 LDYGWNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGL 304
           LDYGWNMIVCV M V QL +WA WA +S HPS WKLW+VVIAGGLAMLLEIYDFPPYEG 
Sbjct: 241 LDYGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGY 300

Query: 305 LDAHALWHATTIPLTYIWWSFIRDDAEFRTSIRVKKAK 342
            DAH++WHA TIPLT +WWSFIRDDAEFRTS  +KK K
Sbjct: 301 FDAHSIWHAATIPLTILWWSFIRDDAEFRTSSLLKKTK 338


>At5g62130 unknown protein
          Length = 276

 Score =  366 bits (939), Expect = e-101
 Identities = 158/276 (57%), Positives = 216/276 (78%)

Query: 67  MQEPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAF 126
           MQEPLYL+WK+WDCQ+DC+Y CM+ RE+ERK     P KY GKWP   +YG+QE  SVAF
Sbjct: 1   MQEPLYLRWKQWDCQSDCQYECMMTREEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAF 60

Query: 127 SALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRD 186
           SAL+LAM F GWVS+FIL+YYKLPL+  ++ YYEY G+ HIY ++ +NS FWS++ HSRD
Sbjct: 61  SALDLAMQFQGWVSYFILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRD 120

Query: 187 VDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLD 246
           V+LTE LDYSSA +L G+SLILAILRSF+++D++ ++MV+AP++A V TH++Y+NFY LD
Sbjct: 121 VELTERLDYSSATVLAGFSLILAILRSFSIQDQSVKIMVTAPILAVVATHILYLNFYNLD 180

Query: 247 YGWNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLD 306
            G +  V   +  ++LV+W +WA L+ HPS+WKL   +I+  L + L ++DFPPY+G +D
Sbjct: 181 EGLHWKVIFGIGGIELVVWGLWAALTSHPSKWKLRAFLISSILTLCLRMFDFPPYKGYID 240

Query: 307 AHALWHATTIPLTYIWWSFIRDDAEFRTSIRVKKAK 342
           AHALW    IPL+Y+WWSF+ DDA FRT++ +KK+K
Sbjct: 241 AHALWRGAGIPLSYLWWSFVCDDAVFRTTVNLKKSK 276


>At3g19260 longevity factor like protein
          Length = 296

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 15/86 (17%)

Query: 128 ALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDV 187
           A ++ ++FHGW +  + L  KL        YY     +++YG+ +L +W       +R  
Sbjct: 100 ARDIKLYFHGWPNQELKLSIKL--------YYMCQCGFYVYGVAALLAW------ETRRK 145

Query: 188 DLTETLDYS-SAVILLGYSLILAILR 212
           D    + +    +ILL YS + +  R
Sbjct: 146 DFAVMMSHHVITIILLSYSYLTSFFR 171


>At5g16340 AMP-binding protein
          Length = 550

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 256 VMAVVQLVIWAV-------WAGLSGHPSRW-KLWLVVIAGGLAMLLEIYDFPPYEGLLDA 307
           VM+V  L+ WAV       W     H + W   W +   GG  + L  +D P    L+  
Sbjct: 212 VMSVDSLIDWAVPKNPVYLWTLPIFHSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRD 271

Query: 308 HALWHATTIPL 318
           H + H    P+
Sbjct: 272 HGVTHMCGAPV 282


>At5g57810 unknown protein
          Length = 317

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 198 AVILLGYSLILAILRSFNVRD----EATRVMVSAPLIA-FVITHVMYINFYKLDYGWNMI 252
           ++ LLGY++ L  +RS++  D       + + S  L+A FV+++       K      ++
Sbjct: 70  SLTLLGYAVWLLYMRSYDCEDILGLPRVQTLASVGLLAVFVVSNAALFLRRKFPMP-ALV 128

Query: 253 VCVVMAVVQLVIWAVWAGLSGHPSR 277
           V VV+ ++ L I   +AG++   SR
Sbjct: 129 VMVVVLLLMLFIGLAYAGVNEMQSR 153


>At4g28680 aromatic amino-acid decarboxylase - like protein
          Length = 545

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 11/58 (18%)

Query: 110 WPFARIYGMQEAASVAFSALNLAMHFHGWVS-----------FFILLYYKLPLKDGKE 156
           W   R+YG +   +     +NLA HF  +V+           +F L+ ++L   DG E
Sbjct: 421 WMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDE 478


>At3g06570 unknown protein
          Length = 390

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 246 DYGWNMIVCVVMAVVQLVIWAVW 268
           DY W MI C  +A+ +   W +W
Sbjct: 342 DYKWKMIWCAEIALERRTSWEIW 364


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.328    0.142    0.485 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,252,206
Number of Sequences: 26719
Number of extensions: 350750
Number of successful extensions: 820
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 816
Number of HSP's gapped (non-prelim): 7
length of query: 342
length of database: 11,318,596
effective HSP length: 100
effective length of query: 242
effective length of database: 8,646,696
effective search space: 2092500432
effective search space used: 2092500432
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)