BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0176a.1
         (440 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g23880 unknown protein                                             104  8e-23
At3g06240 unknown protein                                              91  1e-18
At1g33530 hypothetical protein                                         79  5e-15
At1g11270 unknown protein (At1g11270)                                  77  2e-14
At4g12560 putative protein                                             73  4e-13
At5g52610 putative protein                                             69  4e-12
At1g12870 hypothetical protein                                         65  6e-11
At1g52490 F6D8.29                                                      65  1e-10
At4g22390 unknown protein                                              62  6e-10
At1g71320 hypothetical protein                                         61  1e-09
At5g10340 putative protein                                             59  7e-09
At3g21410 hypothetical protein                                         58  1e-08
At3g20690 hypothetical protein                                         57  2e-08
At1g09650 hypothetical protein                                         57  2e-08
At3g18910 unknown protein                                              56  5e-08
At2g07140 pseudogene                                                   56  5e-08
At3g07870 unknown protein                                              55  6e-08
At5g62660 putative protein                                             55  1e-07
At3g62380 putative protein                                             55  1e-07
At3g19410 hypothetical protein                                         53  3e-07

>At3g23880 unknown protein
          Length = 364

 Score =  104 bits (260), Expect = 8e-23
 Identities = 97/341 (28%), Positives = 150/341 (43%), Gaps = 50/341 (14%)

Query: 10  TVLSMNTPHPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIK--- 66
           T   M +PH  NLP      +++ E+L  LPVKSLTR KCVC SW SLI      +K   
Sbjct: 4   TTREMFSPH--NLPL-----EMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHAL 56

Query: 67  -LHLHRSALHGK-PHLLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKK 124
            L   ++    K P+ ++    S +  +  C+  L  +S   V        H+    L  
Sbjct: 57  ILETSKATTSTKSPYGVI--TTSRYHLKSCCIHSLYNASTVYVSE------HDG--ELLG 106

Query: 125 GDRYHVVGCCNGLICLHGYSVDSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFD--VKL 182
            D Y VVG C+GL+C H     S++       WNP  +L  ++L    ++T + +  V  
Sbjct: 107 RDYYQVVGTCHGLVCFHVDYDKSLY------LWNPTIKL-QQRLSSSDLETSDDECVVTY 159

Query: 183 SFGYDNSTDTYKVVFFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVN 242
            FGYD S D YKVV      +++   V + T         WR   +FP      D     
Sbjct: 160 GFGYDESEDDYKVVAL----LQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADK--SR 213

Query: 243 DGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVV 302
            G++++GT+NW  +   S+              I+S D+  + +  L  P          
Sbjct: 214 SGIYINGTLNWAATSSSSS------------WTIISYDMSRDEFKELPGPVCCGR-GCFT 260

Query: 303 PSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
            ++G L  CL      +G +  +W MK+FG+  SW++LL +
Sbjct: 261 MTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLSI 301


>At3g06240 unknown protein
          Length = 427

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 110/441 (24%), Positives = 181/441 (40%), Gaps = 104/441 (23%)

Query: 30  DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
           ++I E+L  LP KS+ R +CV K + +L  SD  F K+HL          L+L+ E+   
Sbjct: 39  EIITEILLRLPAKSIGRFRCVSKLFCTLS-SDPGFAKIHLD---------LILRNESVRS 88

Query: 90  DHREFCVTHLSGSSLS-------------------LVENPWI-----------SLAHNPR 119
            HR+  V+  +  SL                    L ++P I            L  + R
Sbjct: 89  LHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRR 148

Query: 120 YRLKKGDRYH------VVGCCNGLICLHGYSVDSIFQQGWLSFWNPATRLMSEKLGCFCV 173
             LK   + +      +VG  NGL+C+          +G +  +NP T         F  
Sbjct: 149 VMLKLNAKSYRRNWVEIVGSSNGLVCISP-------GEGAVFLYNPTTGDSKRLPENFRP 201

Query: 174 KTKNFD----VKLSFGYDNSTDTYKVVFFEI--EKIRRASLVSVFTLDGCNGWNGWRDIQ 227
           K+  ++        FG+D  TD YK+V      E I  AS+ S+         + WR I 
Sbjct: 202 KSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKA-------DSWRRIC 254

Query: 228 NFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYT 287
           N   L + ++D     GVH +G I+W+ +  +             Q  +++ D++TE + 
Sbjct: 255 N---LNYEHNDGSYTSGVHFNGAIHWVFTESRH-----------NQRVVVAFDIQTEEFR 300

Query: 288 LLSPPKGLDEVPSVVPS--VGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQL-LKVR 344
            +  P   ++      +  VG L   LC  +     H  IW M ++G+AKSW+++ + + 
Sbjct: 301 EMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRIRINLL 360

Query: 345 YQDLQREPLHSMFYCHYQLFPLCLHDGDTLILASYSDRYDGNEAILYDKRANTAERTALE 404
           Y+ ++               PLC    D  +L       DG + +LY+   N +    + 
Sbjct: 361 YRSMK---------------PLCSTKNDEEVLL----ELDG-DLVLYNFETNASSNLGI- 399

Query: 405 TESKYILGFSSFYYVESLVSP 425
              K   GF +  YVESL+SP
Sbjct: 400 CGVKLSDGFEANTYVESLISP 420


>At1g33530 hypothetical protein
          Length = 441

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 85/316 (26%), Positives = 136/316 (42%), Gaps = 51/316 (16%)

Query: 26  QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
           +L + L+ E+L  LPVK L RLK + K W SLI SD      HL    L      LL+++
Sbjct: 96  ELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESD------HLAEKHLR-----LLEKK 144

Query: 86  NSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSV 145
              +  +E  +T    +S S+    +   +          D   V G CNGL+C+  Y +
Sbjct: 145 ---YGLKEIKITVERSTSKSICIKFFSRRSGMNAINSDSDDLLRVPGSCNGLVCV--YEL 199

Query: 146 DSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKV-VFFEIEKIR 204
           DS++    +   NP T +            +   + + FG D  T TYKV V +  +++ 
Sbjct: 200 DSVY----IYLLNPMTGVTRT-----LTPPRGTKLSVGFGIDVVTGTYKVMVLYGFDRVG 250

Query: 205 RASLVSVFTLDGCNGWNGWRD-IQNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPY 263
                 VF LD     N WR   +    +P S       + V ++G++ W+ + D S   
Sbjct: 251 TV----VFDLD----TNKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLFWLLASDFSE-- 300

Query: 264 YNPVTITVEQLGILSLDLRTETYTLLSPPKGLD--EVPSVVPSVGVLMNCLCFSHDLEGT 321
                       IL +DL TE +  LS P  +D  +V S    +  L + LC S+  +G 
Sbjct: 301 ------------ILVMDLHTEKFRTLSQPNDMDDVDVSSGYIYMWSLEDRLCVSNVRQGL 348

Query: 322 HFVIWQMKKFGDAKSW 337
           H  +W + +   ++ W
Sbjct: 349 HSYVWVLVQDELSEKW 364


>At1g11270 unknown protein (At1g11270)
          Length = 312

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 88/324 (27%), Positives = 137/324 (42%), Gaps = 44/324 (13%)

Query: 18  HPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGK 77
           H  ++ +  L +D++  +L  LPV+SL R KCV   W S I S Q F +  L R      
Sbjct: 26  HCSSVVKLLLPHDVVGLILERLPVESLLRFKCVSNQWKSTIES-QCFQERQLIRRMESRG 84

Query: 78  PHLLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGL 137
           P +L+   +   D  ++    + GSS+               +R          G C GL
Sbjct: 85  PDVLV--VSFADDEDKYGRKAVFGSSIV------------STFRFPTLHTLICYGSCEGL 130

Query: 138 ICLH-GYSVDSIFQQGWLSFWN---PATRLMSEKLGCFCVKTKNFDV-KLSFGYDNSTDT 192
           IC++  YS + +      + W+   P + L       F  K  +F   KL+FG D    T
Sbjct: 131 ICIYCVYSPNIVVNPA--TKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLAFGKDKLNGT 188

Query: 193 YKVVF-FEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTI 251
           YK V+ +   + R   + +    D  N  N WR +   P  P+  +D+   D V+  G++
Sbjct: 189 YKQVWLYNSSEFRLDDVTTCEVFDFSN--NAWRYVH--PASPYRINDY--QDPVYSDGSV 242

Query: 252 NWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLMNC 311
           +W+T   +S               ILS  L TET+ +L     L E   V  S+ +L N 
Sbjct: 243 HWLTEGKESK--------------ILSFHLHTETFQVLCEAPFLRERDPVGDSMCILDNR 288

Query: 312 LCFSHDLEGTHFVIWQMKKFGDAK 335
           LC S ++ G   +IW +   G  K
Sbjct: 289 LCVS-EINGPAQLIWSLDSSGGNK 311


>At4g12560 putative protein
          Length = 408

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 55/334 (16%)

Query: 30  DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
           D++ ++   LP K+L R + + K    LI +D  FI+ HLHR    G   ++L R     
Sbjct: 7   DIVNDIFLRLPAKTLVRCRALSKPCYHLI-NDPDFIESHLHRVLQTGDHLMILLRGAL-- 63

Query: 90  DHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSIF 149
             R + V   S  S+S VE+P           +K+G    V G  NGLI L     D   
Sbjct: 64  --RLYSVDLDSLDSVSDVEHP-----------MKRGGPTEVFGSSNGLIGLSNSPTD--- 107

Query: 150 QQGWLSFWNPATR----LMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVF---FEIEK 202
               L+ +NP+TR    L    +      +    V    GYD+ +D YKVV    F+I+ 
Sbjct: 108 ----LAVFNPSTRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDS 163

Query: 203 IRRASL-----VSVFTLDGCNGWNGWRDIQN----FPLLPFSYDD--WGVNDGVHLSGTI 251
                      V VF+L      N W+ I++      LL + Y    +    GV    ++
Sbjct: 164 EDELGCSFPYEVKVFSLKK----NSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSL 219

Query: 252 NWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGL-DEVPSVVPSVGVLMN 310
           +W+  R      +N          I+  DL  E + ++  P+ + +    +   +GVL  
Sbjct: 220 HWVLPRRPGLIAFNL---------IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVLDG 270

Query: 311 CLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVR 344
           CLC   + + ++  +W MK++    SWT++  V+
Sbjct: 271 CLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQ 304


>At5g52610 putative protein
          Length = 351

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 67/205 (32%), Positives = 92/205 (44%), Gaps = 29/205 (14%)

Query: 27  LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQREN 86
           +  DL+ E+L  LPVK L R  CVCK W + II  + FI L+  RS+   +P+++     
Sbjct: 2   ISEDLLVEILLRLPVKPLARCLCVCKLW-ATIIRSRYFINLYQSRSSTR-QPYVMF---- 55

Query: 87  SHHDHREFCVTH-LSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSV 145
           +  D    C  H  S S  SLV     S  ++           H   C NGLIC+   S 
Sbjct: 56  ALRDIFTSCRWHFFSSSQPSLVTKATCSANNSS----------HTPDCVNGLICVEYMS- 104

Query: 146 DSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVFFEIEKIRR 205
                Q W+S  NPATR     L       + F  K   GYD     YKV+FF  + +  
Sbjct: 105 -----QLWIS--NPATR--KGVLVPQSAPHQKFR-KWYMGYDPINYQYKVLFFSKQYLLS 154

Query: 206 ASLVSVFTLDGCNGWNGWRDIQNFP 230
              + VFTL+G   W    +++N P
Sbjct: 155 PYKLEVFTLEGQGSWK-MIEVENIP 178


>At1g12870 hypothetical protein
          Length = 416

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 92/405 (22%), Positives = 153/405 (37%), Gaps = 88/405 (21%)

Query: 25  TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
           + L +D++ E+   LPVK+L R K + K W S +             S    + HL +  
Sbjct: 31  SSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTL------------ESCYFSQRHLKI-A 77

Query: 85  ENSHHDHREFCV--------THLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVG--CC 134
           E SH DH +  +          +S  ++SL     +S   +  +   +G  + +     C
Sbjct: 78  ERSHVDHPKVMIITEKWNPDIEISFRTISLES---VSFLSSALFNFPRGFHHPIYASESC 134

Query: 135 NGLICLHGYSVDSIFQQGWLSFWNPATR-----------LMSEKLGCFCVKTKNFDVKLS 183
           +G+ C+H      I+        NPATR           +   KL       ++      
Sbjct: 135 DGIFCIHSPKTQDIY------VVNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNH 188

Query: 184 FGYDNSTDTYKVVFFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVND 243
             +  +TD YK+V+       R +   VF        N WR +   P    SY  +    
Sbjct: 189 LAFVKATD-YKLVWLYNSDASRVTKCEVFDFKA----NAWRYLTCIP----SYRIYHDQK 239

Query: 244 GVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVP 303
               +GT+ W T        YN       ++ +++LD+ TE + LL  P  +        
Sbjct: 240 PASANGTLYWFTET------YN------AEIKVIALDIHTEIFRLLPKPSLIASSEPSHI 287

Query: 304 SVGVLMNCLCFSHDLEGTHFV---IWQMKKFGDAKSWTQLLKVRYQDLQREPLHSMFYCH 360
            + ++ N LC  ++ EG   +   IW++K   DA  W ++  +         L S  YCH
Sbjct: 288 DMCIIDNSLCM-YETEGDKKIIQEIWRLKSSEDA--WEKIYTIN--------LLSSSYCH 336

Query: 361 YQLFPLCLHDGDTLILASYSDRYDGNE-----AILYDKRANTAER 400
           + +      DG  L    Y  + D  E     AI  DK+   + R
Sbjct: 337 FHVL-----DGYNLTRLCYWTQKDLVESSTPVAIYKDKKIILSHR 376


>At1g52490 F6D8.29
          Length = 423

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 32/269 (11%)

Query: 30  DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
           DLI E+L  LP KSL R +CV K W+ +I   + F++  + RS L   PH L        
Sbjct: 58  DLIVEILKKLPTKSLMRFRCVSKPWSFIISKRRDFVESIMARS-LRQPPHKLPVFIFHQC 116

Query: 90  DHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSIF 149
           D   F       S+ S    P +S+   P        RY  V    G IC      D + 
Sbjct: 117 DPGTFFTV---SSTFSQSTKPKVSIM--PGRNHYNAFRYQYV---RGFICCSSSVYDLV- 167

Query: 150 QQGWLSFWNPATR--LMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVFFEIEKIRRAS 207
                + +NP TR  L   K+    +  K       FGYD+  + YKV+    +      
Sbjct: 168 -----TIYNPTTRQCLPLPKIESMVLSPKRHK-HCYFGYDHVMNEYKVLAMVNDSQELTQ 221

Query: 208 LVSVFTLD-GCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNP 266
              VFTL   C  W   R   ++ L+  S        GV + GTI ++  R K    Y  
Sbjct: 222 TFHVFTLGRDCPQWRKIRGNIDYELISVS------RAGVCIDGTIYYVAVRRKDNENYG- 274

Query: 267 VTITVEQLGILSLDLRTETYTLLSPPKGL 295
                 +L ++S D+++E +  +  P+ L
Sbjct: 275 ------ELFMMSFDVKSERFYHVRTPETL 297


>At4g22390 unknown protein
          Length = 401

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 53/330 (16%)

Query: 30  DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
           DLI E+   L   +L + + + K   SLI S + F+  HL R    G+  ++L R     
Sbjct: 7   DLINEMFLRLRATTLVKCRVLSKPCFSLIDSPE-FVSSHLRRRLETGEHLMILLR----- 60

Query: 90  DHREFCVTHL-SGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSI 148
             R      L S  ++S + +P           L+ G    V G  NG+I L    VD  
Sbjct: 61  GPRLLRTVELDSPENVSDIPHP-----------LQAGGFTEVFGSFNGVIGLCNSPVD-- 107

Query: 149 FQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSF-----GYDNSTDTYKVVFFEIEKI 203
                L+ +NP+TR +  +L    +     D+   +     GYD+  D +KVV     K+
Sbjct: 108 -----LAIFNPSTRKI-HRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCKL 161

Query: 204 RRASL-------VSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGV---NDGVHLSGTINW 253
           +           V VF+L   N W     +  F +L  SY    +     GV ++  ++W
Sbjct: 162 KEGKKKFPCPVEVKVFSLKK-NSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHW 220

Query: 254 MTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLMNCLC 313
           +  R +    +N          I+  DL ++   +LS P+ L    ++   +GVL  C+C
Sbjct: 221 ILPRRQGVIAFN---------AIIKYDLASDDIGVLSFPQELYIEDNM--DIGVLDGCVC 269

Query: 314 FSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
                E +H  +W +K++ D KSWT+L +V
Sbjct: 270 LMCYDEYSHVDVWVLKEYEDYKSWTKLYRV 299


>At1g71320 hypothetical protein
          Length = 392

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 88/367 (23%), Positives = 147/367 (39%), Gaps = 51/367 (13%)

Query: 21  NLPRTQLHNDLIAE-VLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPH 79
           N P+T    D IAE +   LP+KSL R K + K W S+I S   F    L R+ L   P+
Sbjct: 7   NNPKTIFIPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTY-FSHKRLIRTGLP-TPN 64

Query: 80  LLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPR-YRLKKGDRYHVVGCCNGLI 138
           +     + H       V   S S   L+E       +N + +   +     V+G C+GL+
Sbjct: 65  MKFLHISQHFTAN--FVEEYSNSITFLLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLV 122

Query: 139 CLHGYS-----------------VDSIFQQGW---LSFWNPAT-----RLMSEKLGCFCV 173
            L  +                  +   F Q W   LS+  PA      R +S+ +  + +
Sbjct: 123 LLRIHDDFRSIYLINPTTKEHMKLSPEFMQ-WPFTLSYLTPAMANKPWRQLSQSVLDYDI 181

Query: 174 KTKNFDVKLSFGYDNSTDTYKVV--FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPL 231
             K       FG D    +YKVV  +   E         V +LD  NG    RD+  + +
Sbjct: 182 SVKRMPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEFKAKVLSLD--NGEQ--RDVGFYDI 237

Query: 232 LPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSP 291
               + D      V+ +G++ W+T +  S   Y           +L++DL TE +  +  
Sbjct: 238 HHCIFCD--EQTSVYANGSLFWLTLKKLSQTSYQ----------LLAIDLHTEEFRWILL 285

Query: 292 PKGLDEVPSVVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVRYQDLQRE 351
           P+  D   +    +  L   LC S  LE ++ V+W + +    + W ++  ++   ++  
Sbjct: 286 PE-CDTKYATNIEMWNLNERLCLSDVLESSNLVVWSLHQEYPTEKWEKIYSIKIDVIRTN 344

Query: 352 PLHSMFY 358
            LH  F+
Sbjct: 345 QLHEKFW 351


>At5g10340 putative protein
          Length = 445

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 109/423 (25%), Positives = 171/423 (39%), Gaps = 99/423 (23%)

Query: 8   TVTVLSMNTPHPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKL 67
           ++T+    T   + LP    H+ +   ++  L VK+L + K V K W S I S  +F + 
Sbjct: 55  SITLRDSETSMEELLP----HDVIEYHIMVRLDVKTLLKFKSVSKQWMSTIQSP-SFQER 109

Query: 68  HL--HRSALHGKPHLLL--------QRENSHHDHREFCVTHLSGSSLSLVE--NPWISLA 115
            L  H S   G PH+LL        ++++      E   T L  SS + V+   PW    
Sbjct: 110 QLIHHLSQSSGDPHVLLVSLYDPCARQQDPSISSFEALRTFLVESSAASVQIPTPW---- 165

Query: 116 HNPRYRLKKGDRYHVV--GCCNGLICLHG-YSVDSIFQQGWLSFWNPATRL--------- 163
                     D+ + V    C+GLICL   Y + SI         NP TR          
Sbjct: 166 ---------EDKLYFVCNTSCDGLICLFSFYELPSIVV-------NPTTRWHRTFPKCNY 209

Query: 164 ------MSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVFF----EIEKIRRASLVSVFT 213
                   E+  CF V          FG D  + TYK V+     E++   + +   VF 
Sbjct: 210 QLVAADKGERHECFKVACPT----PGFGKDKISGTYKPVWLYNSAELDLNDKPTTCEVFD 265

Query: 214 LDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQ 273
                  N WR +  FP  P         D V++ G+++W T+                +
Sbjct: 266 F----ATNAWRYV--FPASPHLI--LHTQDPVYVDGSLHWFTALSHEG-----------E 306

Query: 274 LGILSLDLRTETYTLLSPPKGL---DEVPSVVPSVGVLMNCLCFSHDLEGTHFVIWQMKK 330
             +LSLDL +ET+ ++S    L   DE   V+ ++G   + LC S + +  + VIW +  
Sbjct: 307 TMVLSLDLHSETFQVISKAPFLNVSDEYYIVMCNLG---DRLCVS-EQKWPNQVIWSLDD 362

Query: 331 FGDAKSWTQLLKVRYQDLQREPLHSMFYCHYQLF-PLCLHDGDTLILASYSDRYDGNEAI 389
             D K+W Q+  +   DL      S+F+     F PL + D D L+   + D   G+  +
Sbjct: 363 -SDHKTWKQIYSI---DL--IITSSLFFSAIFAFTPLAVLDKDKLL---FYDSTHGDAFL 413

Query: 390 LYD 392
            +D
Sbjct: 414 THD 416


>At3g21410 hypothetical protein
          Length = 374

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 82/336 (24%), Positives = 124/336 (36%), Gaps = 79/336 (23%)

Query: 30  DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
           +L  E+L  +P KSL RLK  CK W +L  +D+ FI             HL L RE+   
Sbjct: 14  ELFEEILCRVPTKSLLRLKLTCKRWLAL-FNDKRFI-----------YKHLALVREHI-- 59

Query: 90  DHREFCVTHLSGSSLSLVENPWISLAHN---PRYRLKKGDRYHVVGCCNGLICLHGYSVD 146
                    +  + +  + NP +    +   P     KG+ Y +V C   L+C       
Sbjct: 60  ---------IRTNQMVKIINPVVGACSSFSLPNKFQVKGEIYTMVPCDGLLLC------- 103

Query: 147 SIFQQGWLSFWNPATR-------LMSEKLGCFCVKTKNFDVKLSFGYDN-STDTYKVVFF 198
            IF+ G ++ WNP          L     GC C            GYD  S D+YK++ F
Sbjct: 104 -IFETGSMAVWNPCLNQVRWIFLLNPSFRGCSC---------YGIGYDGLSRDSYKILRF 153

Query: 199 EIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGV---NDGVHLSGTINWMT 255
                     V ++ L      N W+  +          DW V     G+ L G + W+ 
Sbjct: 154 YANTGSYKPEVDIYELKS----NSWKTFK-------VSLDWHVVLRCKGLSLKGNMYWIA 202

Query: 256 SRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLMNCLCFS 315
             ++    +           I S +  TET+  L       +V +VV       + L   
Sbjct: 203 KWNRKPDIF-----------IQSFNFSTETFEPLCSLPVRYDVHNVVALSAFKGDNLSLL 251

Query: 316 HDLEGTHFV-IWQMKKFGDAKS--WTQLLKVRYQDL 348
           H  + T  + +W   K  +  S  WT+L  V   DL
Sbjct: 252 HQSKETSKIDVWVTNKVKNGVSILWTKLFSVTRPDL 287


>At3g20690 hypothetical protein
          Length = 370

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 41/251 (16%)

Query: 25  TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
           + L +DL+ E+LS LP+ SL  ++  CK+WN ++   ++F   H+      GK  L++ +
Sbjct: 4   SDLPHDLVEEILSRLPLISLKAMRSTCKTWN-VLSKHRSFANKHIGNVTASGKRDLIMIK 62

Query: 85  ENSHHDHREFCVTHLSGSSLSLVENP----WISLAHNPRYRLKKGD----RYHVVGCCNG 136
           +         C  +  G +L  ++N      +S+ +     L+  D        V  CNG
Sbjct: 63  D---------CKVYSIGVNLHGIQNNNNIIDLSIKNKGILHLENLDLIFKEIFNVFHCNG 113

Query: 137 LICLHGYSVDSIFQQGWLSFWNP--ATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYK 194
           L+ L+G   D   +   L   NP    R   +++  F     +FD KL+FGYD S   +K
Sbjct: 114 LLLLYGSITDDSIR---LVVCNPYWGKREWVKRINNFA----SFD-KLAFGYDKSCGCHK 165

Query: 195 VV-FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINW 253
           ++  F+    R         L+  N  +  R + +FPL    +D   + DGV L G   W
Sbjct: 166 ILRVFDSYPNR---------LEIYNLRSNSRMVSSFPL---KWDIAFMQDGVSLKGNTYW 213

Query: 254 MTSRDKSAPYY 264
                +S   Y
Sbjct: 214 YAKDRRSEDCY 224


>At1g09650 hypothetical protein
          Length = 382

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 95/384 (24%), Positives = 147/384 (37%), Gaps = 77/384 (20%)

Query: 27  LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLL-QRE 85
           L ++++  +L  L    L R K V K W S I S   F +    +    G P +L+  R 
Sbjct: 13  LPHEVVECILERLDADPLLRFKAVSKQWKSTIESP-FFQRRQFTQRQQSGNPDVLMVSRC 71

Query: 86  NSHHDHREFCVTHLSGSSLSL-VENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYS 144
              +   E   T + GSS S+ +  PW       +      D       C+GL+CL    
Sbjct: 72  ADINSEIEALTTLVLGSSSSVKIPTPWEEEEEEDKEYSVSQDS------CDGLVCLFDK- 124

Query: 145 VDSIFQQGWLSFWNPATRLMSEKLGC------FCVKTKNFDV-----KLSFGYDNSTDTY 193
               F+ G++  +NPATR       C        +    +D+     +L FG D  T TY
Sbjct: 125 ----FKSGFV--FNPATRWYHPLPLCQLQQLLIAIGDGFYDLGYRVSRLGFGKDKLTGTY 178

Query: 194 KVVFF--EIE-KIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGT 250
           K V+    IE  +  A+   VF        N WR +   P  P  Y   G    V + G+
Sbjct: 179 KPVWLYNSIEIGLENATTCEVFDFST----NAWRYVS--PAAP--YRIVGCPAPVCVDGS 230

Query: 251 INWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLS--PPKGLDEVPSVVPSVGVL 308
           ++W T                E+  ILS DL TET+ ++S  P   +D    V+ +   L
Sbjct: 231 LHWFTE--------------CEETKILSFDLHTETFQVVSKAPFANVDGFDIVMCN---L 273

Query: 309 MNCLCFSHDLEGTHFVIWQMKK-------------------FGDAKSWTQLLKVRYQDLQ 349
            N LC S +++  + VIW                       FG  +    L        +
Sbjct: 274 DNRLCVS-EMKLPNQVIWSFNSGNKTWHKMCSINLDITSRWFGPTQVCAVLPLALLDGKK 332

Query: 350 REPLHSMFYCHYQLFPLCLHDGDT 373
           ++    +FYC  +   + +HD +T
Sbjct: 333 KKKKKLLFYCRVRKRTMVVHDDET 356


>At3g18910 unknown protein
          Length = 388

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 45/274 (16%)

Query: 26  QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
           QL NDL+ E+L  +P  SL RL+  CK+WN L   D+     H  +SA   +   L    
Sbjct: 7   QLPNDLVEEILCRVPATSLRRLRSTCKAWNRLFKGDRILASKHFEKSAKQFRSLSL---- 62

Query: 86  NSHHDHREFCVT-HLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYS 144
              +D+R F ++ +L G+S SL     +   H+ +      +   V+ C   L+C     
Sbjct: 63  --RNDYRIFPISFNLHGNSPSLELKSELIDPHS-KNSAAPFEISRVIHCEGLLLC----- 114

Query: 145 VDSIFQQGWLSFWNPAT-RLMSEKLGCFCVKTKNFDVKLSFGYDNST--DTYKVVFFEIE 201
             S   +  +  WNP T      + G F  K ++FDV   +  D  +   +YK++ +   
Sbjct: 115 -SSQLDESRVVVWNPLTGETRWIRTGDFRQKGRSFDVGYYYQKDKRSWIKSYKLLCY--- 170

Query: 202 KIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGV-NDGVHLSGTINW--MTSRD 258
                                +R  + F +  F  D W + +D +   G+I +  ++   
Sbjct: 171 ---------------------YRGTKYFEIYDFDSDSWRILDDIIAPRGSIGYSELSVSL 209

Query: 259 KSAPYYNPVTITVEQLGILSLDLRTETYTLLSPP 292
           K   Y+    +T E+   +SL L+ + YT  S P
Sbjct: 210 KGNTYWFAKGVTEERPRTISL-LKFDFYTEKSVP 242


>At2g07140 pseudogene
          Length = 384

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 80/329 (24%), Positives = 133/329 (40%), Gaps = 47/329 (14%)

Query: 26  QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
           +L  DL+ E+LS++P  SL RL+  CK WN L   D+ F ++H  ++A   +P  L +  
Sbjct: 5   ELPKDLVEEILSFVPATSLKRLRSTCKGWNRLFKDDKRFTRIHTEKAAKQFQPLTLTK-- 62

Query: 86  NSHHDHREFCV--THLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGY 143
                +   C    +L G++ SL     +SL                V  C+GL+ L   
Sbjct: 63  -----NYRICPINVNLHGTTPSLEVKNEVSLLDPHSKNSAAQFNIDRVFHCDGLL-LCTS 116

Query: 144 SVDSIFQQGWLSFWNPATRLMS-EKLGCFCVKTKNFDVKLSFGYDNST--DTYKVVFFEI 200
             DS F       WNP T +    +LG       N  +    GYDN +   +YK + F  
Sbjct: 117 QKDSRF-----VVWNPLTGVTKWIELG----DRYNEGMAFILGYDNKSCNKSYKAMSFNY 167

Query: 201 EKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKS 260
             + + S +  F+ D       WR I +  + P  Y D+   +   L G   W+    + 
Sbjct: 168 --LDKDSEIYEFSSD------SWRVIDDI-IKPPHYMDY-FRECFSLKGNTYWLGIDRRR 217

Query: 261 APYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVL----MNCLCFSH 316
            P    +T       ++  D  TE +  +S P           ++ V+    ++ L  + 
Sbjct: 218 RPPDLRIT-------LIKFDFGTEKFGYVSLPPPCQVHGFEASNLSVVGDEKLSVLVQAG 270

Query: 317 DLEGTHFVIWQMKKFGDAK--SWTQLLKV 343
               T   +W   K G+A   SW+++L +
Sbjct: 271 STSKTE--VWVTSKIGEANVVSWSKVLSL 297


>At3g07870 unknown protein
          Length = 417

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 81/331 (24%), Positives = 126/331 (37%), Gaps = 56/331 (16%)

Query: 27  LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQREN 86
           L  D+IA++ S LP+ S+ RL  VC+SW S++             S+   KP LLL  ++
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSS----SSSSPTKPCLLLHCDS 83

Query: 87  SHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVD 146
              +   F         LS  E    +     R+     + + VVG CNGL+CL     D
Sbjct: 84  PIRNGLHFL-------DLSEEEKRIKTKKFTLRFASSMPE-FDVVGSCNGLLCLS----D 131

Query: 147 SIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKV---VFFEIEKI 203
           S++    L  +NP T    E   C   K  + ++   FG+   T  YKV   V+F     
Sbjct: 132 SLYNDS-LYLYNPFTTNSLELPEC-SNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSS 189

Query: 204 R-------------RASLVSVFTLDG--CNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLS 248
                         + S V + TL     +    WR +   P     Y     +    ++
Sbjct: 190 NNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP-----YKFVKRSSEALVN 244

Query: 249 GTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPK--GLDEVPSVVPSVG 306
           G ++++T   +  P              +S DL  E +  +  P   GL+     + +  
Sbjct: 245 GRLHFVTRPRRHVP----------DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVN-- 292

Query: 307 VLMNCLCFSHDLEGTHFVIWQMKKFGDAKSW 337
            L  CLC           IW MK +G  +SW
Sbjct: 293 -LKGCLCAVVYGNYGKLDIWVMKTYGVKESW 322


>At5g62660 putative protein
          Length = 379

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 70/283 (24%), Positives = 111/283 (38%), Gaps = 45/283 (15%)

Query: 20  DNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPH 79
           D L   ++  DL+ E+L+ LP KSL R KCV K W+SLI S + F   +L        P 
Sbjct: 34  DALVAPEIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRS-RFFSNCYLTVKTPRRPPR 92

Query: 80  LLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNG--L 137
           L +             V HL  +SL +   P  S+  +     +  ++   +    G  +
Sbjct: 93  LYMS-----------LVDHLLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNM 141

Query: 138 ICLHGYSVDSIFQQGWLSFWNPATR----LMSEKLGCFCVKTKNFDVKLSFGYDNSTDTY 193
           + L G  +  + +    S +NP TR    L + K      K+    +   FGYD   D Y
Sbjct: 142 VVLRGLILYVVCRTA--SIYNPTTRQSVTLPAVKSNILAQKSHWNSLLYFFGYDPVLDQY 199

Query: 194 KVV----FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSG 249
           KVV     F     R  S   VF L+    W           + F         G+ ++G
Sbjct: 200 KVVCTVALFSKRLKRITSEHWVFVLEPGGSWK---------RIEFDQPHLPTRLGLCVNG 250

Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPP 292
            I ++ S  K                ++S D+R+E ++++  P
Sbjct: 251 VIYYLASTWKRRDI------------VVSFDVRSEEFSMIQGP 281


>At3g62380 putative protein
          Length = 325

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 41/226 (18%)

Query: 130 VVGCCNGLICLHGYSVDSIFQQGWLSFWNPATR----LMSEKLGCFCVKT---KNFDVKL 182
           ++G CNG++C        I+  G++   NPATR    L  E L  +  +T    +  + +
Sbjct: 74  IMGYCNGIVC--------IYDLGYIYLINPATRKLRILSPEFLREYTGRTGWSNDLPINV 125

Query: 183 SFGYDNSTDTYKVV---FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDW 239
            FG D  T TYKV+    F+   ++  +L         N  NG R    FP+   SY   
Sbjct: 126 GFGRDMVTGTYKVILMYLFDRNFVKTEAL---------NLKNGERRYVYFPI---SYGQL 173

Query: 240 GVND--GVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDE 297
           G ND   +  +G++ W+   D    +Y     T + + + ++DL TET+  +  P    +
Sbjct: 174 G-NDKRSIFANGSLYWLPKPD--VDFY-----TNQLIKLAAIDLHTETFRYVPLPSWYTK 225

Query: 298 VPSVVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
               V  +  L + LC S  L+     +W +++   +  W ++  V
Sbjct: 226 YCKSV-YLWSLKDSLCVSDVLQNPSVDVWSLQQEEPSVKWEKMFSV 270


>At3g19410 hypothetical protein
          Length = 373

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 49/183 (26%), Positives = 80/183 (42%), Gaps = 28/183 (15%)

Query: 26  QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
           +L  DLI E+L ++P   L RL+  CK WN L   D+ F K H  ++A   K  L L   
Sbjct: 5   ELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAA---KQFLPLMST 61

Query: 86  NSHHDHREFCV--THLSGS--SLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLH 141
           N      E C    +L G+  SL + + PW+ ++ +    ++    +H  G    L+C  
Sbjct: 62  N-----EELCAMSVNLHGTIPSLEVKDKPWLFVSDSKHCDIEISRIFHSGGL---LLCFS 113

Query: 142 GYSVDSIFQQGWLSFWNP---ATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVFF 198
                SI        WNP    TRL+  +      + K  +  L +  ++    YK++ F
Sbjct: 114 RDGEISII------VWNPLTSETRLIRTRNR----RDKGRNFVLGYYQEDKKTYYKILSF 163

Query: 199 EIE 201
            ++
Sbjct: 164 YLD 166


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.137    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,749,944
Number of Sequences: 26719
Number of extensions: 474795
Number of successful extensions: 1503
Number of sequences better than 10.0: 261
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 309
length of query: 440
length of database: 11,318,596
effective HSP length: 102
effective length of query: 338
effective length of database: 8,593,258
effective search space: 2904521204
effective search space used: 2904521204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)