Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0175.3
         (520 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g23690 unknown protein                                             597  e-171
At3g48830 putative protein                                            572  e-163
At1g28090 Arabidopsis thaliana polynucleotide adenylyltransferas...   499  e-141
At2g17580 poly(A) polymerase like protein                             334  6e-92
At1g22660 tRNA adenylyltransferase lkike protein                       56  4e-08
At1g44170 puative aldehyde dehydrogenase                               32  0.85
At5g38690 unknown protein                                              30  2.5
At2g16280 putative beta-ketoacyl-CoA synthase                          30  4.2
At5g34880 putative protein                                             29  7.2
At5g13210 unknown protein                                              28  9.4
At1g25450 unknown protein                                              28  9.4

>At5g23690 unknown protein
          Length = 527

 Score =  597 bits (1538), Expect = e-171
 Identities = 295/463 (63%), Positives = 375/463 (80%), Gaps = 3/463 (0%)

Query: 59  WKKLNSKELGLRNSMIAHPTKRVLSTLKKKGYDVYLVGGCVRDLILKQTPKDFDILTSAD 118
           WK+LNSK+LGL +SMIA  T++VL+ LK KG+DVYLVGGCVRDLILK+TPKDFDILTSA+
Sbjct: 64  WKQLNSKDLGLSSSMIAKSTRKVLNGLKSKGHDVYLVGGCVRDLILKRTPKDFDILTSAE 123

Query: 119 LKEVMRSFSWCEIVGKRFPICHVHMDGTVVEVSSFNTNKFKPRTRFVHDIEAPNGCD-NE 177
           L+EV+R+F  CEIVG+RFPICHVH+   ++EVSSF+T+          + +  +G D +E
Sbjct: 124 LREVVRTFPRCEIVGRRFPICHVHIGDDLIEVSSFSTSAQNSSRNTRTECKESSGSDGDE 183

Query: 178 DFLRWKNCLNRDFTINGLMFDPYAKIVYDYMGGMEDIVKAKVRTVVPAATSFQEDCARIL 237
           D +R  NCL RDFTINGLMFDPYAK+VYDY+GGMEDI KAKVRTV+ A TSF +DCARIL
Sbjct: 184 DCIRLNNCLQRDFTINGLMFDPYAKVVYDYLGGMEDIRKAKVRTVIHAGTSFHQDCARIL 243

Query: 238 RAIRIAARLGFSISRETAHSVKNLSYSILRLDKGRLMMEMNYMLAYGSAEASLRLLWRFG 297
           RAIRIAARLGF +S+ETAH +KNLS  + RLDKGR++MEMNYMLAYGSAEASLRLLW+FG
Sbjct: 244 RAIRIAARLGFRMSKETAHFIKNLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFG 303

Query: 298 LLDILLPFQAVYFVHHRFRRRDKRTNMLLSLFSNLDKLLAPNRPCHSSLWVGILALHKTL 357
           +L+ILLP QA Y     FRRRDKRTNMLLSLF+NLDKLLAP+RPCHSSLW+ ILA HK L
Sbjct: 304 ILEILLPIQAAYLARSGFRRRDKRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKAL 363

Query: 358 SDQPRNPLVVAAFSLAVHNGGNLLEAVDISRRINQPHDDRFPELLDPSD-LEAEALADEI 416
           +D+PR+P+VVAAFSLAVHN G++LEAV+I+++I +PHD  F EL++P + L+ + L DE+
Sbjct: 364 ADKPRSPIVVAAFSLAVHNCGDILEAVEITKKITRPHDKSFFELVEPEENLDFQTLLDEV 423

Query: 417 LDLAESVKESLLQMTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCLRARAGR- 475
           +DL  S++++L QMT  + +S+AM+ YPQAP+SD+VFIPL +YL+   IFDC++    R 
Sbjct: 424 MDLDASIEDALNQMTDAYFISKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRI 483

Query: 476 KFLSKQDRKTDYESLAHGDLQEVRHMLAMVVFDTIYPLHLDRD 518
            F +KQ  K +Y SL  G   E+RH+ A VVFDT++PL+L ++
Sbjct: 484 GFEAKQGSKIEYGSLNSGYFPEIRHVFARVVFDTVFPLNLSQE 526


>At3g48830 putative protein
          Length = 881

 Score =  572 bits (1473), Expect = e-163
 Identities = 292/499 (58%), Positives = 369/499 (73%), Gaps = 20/499 (4%)

Query: 1   MATATTLKFVCKPNLHLRIAP-FQCVRKVSQLKL----------NLNHTHHLASSFISVC 49
           MA  +   F C+   H  + P F C  KV    +          + +H H   S+     
Sbjct: 1   MAVLSVGFFACRS--HFPVLPLFYCFSKVQLNTVAAAMETVDDKDSDHHHDKGSN----- 53

Query: 50  FPQNKKTPAWKKLNSKELGLRNSMIAHPTKRVLSTLKKKGYDVYLVGGCVRDLILKQTPK 109
             +  K P WKKLNSK+LG+  SMI+ PT+ VL+ LK KGYDVYLVGGCVRDLILK+TPK
Sbjct: 54  --KTSKAPEWKKLNSKDLGITTSMISKPTRIVLNGLKSKGYDVYLVGGCVRDLILKRTPK 111

Query: 110 DFDILTSADLKEVMRSFSWCEIVGKRFPICHVHMDGTVVEVSSFNTNKFKPRTRFVHDIE 169
           DFDILTSA+L+EV+RSFS CEI+GK+FPICHVH+   ++EVSSF+T+             
Sbjct: 112 DFDILTSAELREVVRSFSRCEIIGKKFPICHVHIGNDMIEVSSFSTSAQNSLRNTRTGSG 171

Query: 170 APNGCDNEDFLRWKNCLNRDFTINGLMFDPYAKIVYDYMGGMEDIVKAKVRTVVPAATSF 229
             NG  +ED +R+ NCL RDFTINGLMFDPYAK++YDY+GG+EDI KAKVRTV  A TSF
Sbjct: 172 KSNGSYDEDSIRFNNCLQRDFTINGLMFDPYAKVIYDYLGGIEDIKKAKVRTVFHAGTSF 231

Query: 230 QEDCARILRAIRIAARLGFSISRETAHSVKNLSYSILRLDKGRLMMEMNYMLAYGSAEAS 289
           QED ARILR  RIAARLGF+IS+ETAH +KNLS+ + RL +GR+++EMNYMLAYGSAEAS
Sbjct: 232 QEDSARILRGTRIAARLGFTISKETAHFLKNLSFLVQRLHRGRILLEMNYMLAYGSAEAS 291

Query: 290 LRLLWRFGLLDILLPFQAVYFVHHRFRRRDKRTNMLLSLFSNLDKLLAPNRPCHSSLWVG 349
           LRLLW+FG+L+ILLP QA Y V   F+RRDKR+N+LLSLF NLDKLLAP++PCHSSLW+ 
Sbjct: 292 LRLLWKFGILEILLPIQAAYLVRTGFKRRDKRSNLLLSLFGNLDKLLAPDKPCHSSLWLT 351

Query: 350 ILALHKTLSDQPRNPLVVAAFSLAVHNGGNLLEAVDISRRINQPHDDRFPELLDPSDLEA 409
           ILALHK L+DQPR P VVAAFSLAVHNGG++LEAV  +R++ +PH+  F ELL+P ++++
Sbjct: 352 ILALHKALADQPRYPSVVAAFSLAVHNGGDVLEAVKNTRKVTKPHNRSFFELLEPEEMDS 411

Query: 410 EALADEILDLAESVKESLLQMTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCL 469
           + L DE++D   S+KE+L QMT    +S+AMA YPQAP+SDMVFIPL +YL    IF+C+
Sbjct: 412 QTLLDEVMDFDSSIKEALGQMTDGRFISKAMAAYPQAPYSDMVFIPLQLYLDARRIFECV 471

Query: 470 RARAGRKFLSKQDRKTDYE 488
           +    + F+ KQD K + E
Sbjct: 472 KENGQKGFVPKQDSKREPE 490


>At1g28090 Arabidopsis thaliana polynucleotide adenylyltransferase
           family
          Length = 541

 Score =  499 bits (1285), Expect = e-141
 Identities = 252/464 (54%), Positives = 335/464 (71%), Gaps = 6/464 (1%)

Query: 55  KTPAWKKLNSKELGLRNSMIAHPTKRVLSTLKKKGYDVYLVGGCVRDLILKQTPKDFDIL 114
           K+  WKKL++ E G++ SMI   T+ VL+ LKKKG+ VYLVGGCVRDLIL + PKDFD++
Sbjct: 78  KSMPWKKLDANEFGIQRSMIPDSTRMVLNKLKKKGFQVYLVGGCVRDLILDRIPKDFDVI 137

Query: 115 TSADLKEVMRSFSWCEIVGKRFPICHVHMDGTVVEVSSFNTNKFKPRTRFVHDIEAPNGC 174
           T+A+LKEV + F  C+IVG+RFPICHV++D  ++EVSSF+T+    +         P GC
Sbjct: 138 TTAELKEVRKVFPGCQIVGRRFPICHVYVDDIIIEVSSFSTSARTGKAPN-KSFRRPAGC 196

Query: 175 DNEDFLRWKNCLNRDFTINGLMFDPYAKIVYDYMGGMEDIVKAKVRTVVPAATSFQEDCA 234
           D  D++RWKNCL RDFT+NGLMFDP   +VYDY+GG+ED+  +KVRTV  A  SF ED A
Sbjct: 197 DERDYIRWKNCLQRDFTVNGLMFDPSENVVYDYIGGVEDLRNSKVRTVSAANLSFVEDTA 256

Query: 235 RILRAIRIAARLGFSISRETAHSVKNLSYSILRLDKGRLMMEMNYMLAYGSAEASLRLLW 294
           RILRAIRIAARLGFS++++ A SVK LS S+LRLD  R+ ME+NYMLAYGSAEASLRLLW
Sbjct: 257 RILRAIRIAARLGFSLTKDVAISVKELSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLW 316

Query: 295 RFGLLDILLPFQAVYFVHHRFRRRDKRTNMLLSLFSNLDKLLAPNRPCHSSLWVGILALH 354
           RFGL++ILLP QA Y V   FRRRD R+NMLLSLF NLD+L+AP+RPC   LW+GILA H
Sbjct: 317 RFGLMEILLPIQASYLVSQGFRRRDGRSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFH 376

Query: 355 KTLSDQPRNPLVVAAFSLAVHNGGNLLEAVDISRRINQPHDDRFPELLDPSDLEAEA--- 411
           K L DQPR+P VVA+F LA+++  +L EA+ I+R  ++ H+  F EL  P    A++   
Sbjct: 377 KALVDQPRDPTVVASFCLAIYSEVSLSEAIAIARSNSKQHNSHFQELSSPEKDTADSESK 436

Query: 412 LADEILDLAESVKESLLQMTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCLRA 471
           ++ +++ LAES++ +  ++  R  ++ AM+ YPQAP SDMVF+   M  +   +F  +R 
Sbjct: 437 ISQQVIKLAESIRSAARKLNNRDYIANAMSKYPQAPGSDMVFLSRLMLERVEKMFGNVRR 496

Query: 472 RAG--RKFLSKQDRKTDYESLAHGDLQEVRHMLAMVVFDTIYPL 513
           +    R  +   +R+ +Y+SLA GD  E R + A +VFDTIYPL
Sbjct: 497 KGNQERDDVPSLERRINYKSLALGDFHETRRVFARIVFDTIYPL 540


>At2g17580 poly(A) polymerase like protein
          Length = 757

 Score =  334 bits (857), Expect = 6e-92
 Identities = 191/474 (40%), Positives = 283/474 (59%), Gaps = 23/474 (4%)

Query: 56  TPAWKKLNSKELGLRNSMIAHPTKRVLSTLKKKGYDVYLVGGCVRDLILKQTPKDFDILT 115
           T  WKK+ + + G++NSMI   +  VL  L+++G+D YLVGGCVRDLIL + PKD+D++T
Sbjct: 56  TSKWKKVRASDAGIKNSMIPESSMNVLRLLRRQGFDAYLVGGCVRDLILNRVPKDYDVIT 115

Query: 116 SADLKEVMRSFSWCEIVGKRFPICHVHMDGTVVEVSSFNT--------NKFKPRTRFVHD 167
           +ADLK++ R F   +++GKRFPICHV M G+++EVSSF+T         K K ++    D
Sbjct: 116 TADLKQIRRLFHRAQVIGKRFPICHVWMGGSIIEVSSFDTVAHSDSDLEKSKEKSGVSLD 175

Query: 168 IEAP---------NGCDNEDFLRWKNCLNRDFTINGLMFDPYAKIVYDYMGGMEDIVKAK 218
            +A          +G D +D  RW+N L RDFTIN L ++P+   +YDY  GMED+   K
Sbjct: 176 TKANKNNSLFKMYSGWDIKDCKRWRNSLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLK 235

Query: 219 VRTVVPAATSFQEDCARILRAIRIAARLGFSISRETAHSVKNLSYSILRLDKGRLMMEMN 278
           +RT+VPA  SF+EDCARILR +RIAARLG S+S++   ++     S+  LD+ RL+MEMN
Sbjct: 236 LRTLVPAHLSFKEDCARILRGLRIAARLGLSLSKDVKTAIPEFVSSVANLDQFRLIMEMN 295

Query: 279 YMLAYGSAEASLRLLWRFGLLDILLPFQAVYFVHHRFRRRDKRTNMLLSLFSNLDKLLAP 338
           YMLAYG+A  S+ LL +F LL +LLPFQA Y +    +     + ML+ LFSN+DKL++ 
Sbjct: 296 YMLAYGAAAPSILLLMKFKLLHVLLPFQAAY-LDQASKTSLSSSLMLVRLFSNMDKLVSC 354

Query: 339 NRPCHSSLWVGILALHKTLSDQPRNPLVVAAFSLAVHNGGNLLEAVDISRRINQPHDDRF 398
           ++P    LW+ +LA H  L   P+  +VV AF+  +++ GN  +AV+ +R          
Sbjct: 355 DQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYH-GNWSKAVEFAREHETSVIGYA 413

Query: 399 PELLDPSDLEA-EALADEILDLAESVKESLLQMTTRHMVSQAMADYPQAPHSDMVFIPLG 457
           PE+   S   + E LA+ + +    +K++   +T +  + +A+  YP    S +VFIP  
Sbjct: 414 PEVSKSSRKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYLYPDFKFSGLVFIPKK 473

Query: 458 MYLKTVSIFDCLRARAGRKFLS-KQDRKTDYESLAHGDLQEVRHMLAMVVFDTI 510
                   F  +R      + S K+    DY  L  G+  EVR +L  ++ DTI
Sbjct: 474 KGRDVAEGF--MRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTI 525


>At1g22660 tRNA adenylyltransferase lkike protein
          Length = 605

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 25/223 (11%)

Query: 80  RVLSTLKKKGYDVYL--VGGCVRDLILKQTPKDFDI-LTSADLKEVMRSFSWCEIVGKRF 136
           R+LSTL+    D  L   GG VRD +L +   D DI + +    E +  F   E +  R 
Sbjct: 96  RLLSTLRYCNLDTQLRVAGGWVRDKLLGKESDDIDIAIDNMSGSEFLDKFK--EYLSSRD 153

Query: 137 PICHVHMDGTVVEVSSFNTNKFKPRTRFVHD-------IEAPNGCDNEDFLRWK------ 183
               V  D TV+E +   +   +     ++D       + +    +N      K      
Sbjct: 154 E--EVQGD-TVIERNPDQSKHLETAKLRIYDQWIDFVNLRSEEYTENSRIPTMKFGTAKD 210

Query: 184 NCLNRDFTINGLMFDPYAKIVYDYMG-GMEDIVKAKVRTVVPAATSFQEDCARILRAIRI 242
           +   RD TIN L ++  +  V D    G++D+   K+ T +PA  +F +D  R+LRA+R 
Sbjct: 211 DAFRRDLTINSLFYNINSGAVEDLTERGIDDLKSGKIVTPLPAKATFLDDPLRVLRAVRF 270

Query: 243 AARLGFSISRETAHSVKNLSYSIL---RLDKGRLMMEMNYMLA 282
            AR GF++  E   +  +    +    ++ + R+  E++ M++
Sbjct: 271 GARFGFTLDEELKEAASSEEVRVALGEKISRERIGNEIDLMIS 313


>At1g44170 puative aldehyde dehydrogenase
          Length = 484

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 21/66 (31%), Positives = 36/66 (53%), Gaps = 7/66 (10%)

Query: 364 PLVVAAFSLAVHN--GGNLLEAVDISRRINQPHDDRFPELLDPSDLEAEALADEILDLAE 421
           P ++ A  L +    G N +E+ D+SR +N  H DR  +LLD  +     ++D+I+   E
Sbjct: 267 PKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKLLDEKE-----VSDKIVYGGE 321

Query: 422 SVKESL 427
             +E+L
Sbjct: 322 KDRENL 327


>At5g38690 unknown protein
          Length = 572

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 6/67 (8%)

Query: 25  VRKVSQLKLNLNHTHHLASSFISVCFPQNKKTPAWKKLNSKELGLRNSMIAHPTKRVLST 84
           V+K +  K+ L+ + H  +  I     + KK    KK  +K  G++ + +A   KR+   
Sbjct: 188 VKKSNPKKIKLSDSVHATTEVIKKVLAEGKK----KKTTAK--GIKENNVAEKIKRIKPA 241

Query: 85  LKKKGYD 91
           LKKK  D
Sbjct: 242 LKKKEED 248


>At2g16280 putative beta-ketoacyl-CoA synthase
          Length = 512

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 41/218 (18%), Positives = 84/218 (37%), Gaps = 22/218 (10%)

Query: 137 PICHVHMDGTVVEVSSFNTNKFKPRTRFVHDIEAPNGCDNEDFLRWKNCLNRDFTINGLM 196
           P C   + G+ + +S+   ++ + + + VH +    G   + F    NC+ ++   NG  
Sbjct: 289 PNCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAF----NCVYQEQDDNGKT 344

Query: 197 FDPYAKIVYDYMGGMEDIVKAKVRTVVPAATSFQEDCARILRAIRIAARLGFSISRETAH 256
               +K   D M    + +KA + T+ P      E   +IL  + +  +  F+   +   
Sbjct: 345 GVSLSK---DLMAIAGEALKANITTLGPLVLPISE---QILFFMTLVTKKLFNSKLKPYI 398

Query: 257 SVKNLSYSILRLDKGRLM----MEMNYMLAYGSAEASLRLLWRFGLLDILLPFQAVYFVH 312
               L++    +  G       +E N  L+    EAS   L RFG       +  + ++ 
Sbjct: 399 PDFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIE 458

Query: 313 HRFRRRDKRTNMLLSLFSNLDKLLAPNRPCHSSLWVGI 350
            + R +       ++  S           C+S++WV +
Sbjct: 459 AKGRMKKGNRVWQIAFGSGF--------KCNSAVWVAL 488


>At5g34880 putative protein
          Length = 420

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/79 (27%), Positives = 37/79 (45%), Gaps = 4/79 (5%)

Query: 362 RNPLVVAAFSLAVHN-GGNLLEAVDISRRINQPHDDRFPELLDPSDLEAEALADEILDLA 420
           RN L+ A FS  +   G ++    + +R + +PHDD     LD ++ E   +   ++D  
Sbjct: 304 RNFLIKANFSQEIDILGASISFDEEETRHLERPHDDALVLTLDVANFEVSRI---LIDTR 360

Query: 421 ESVKESLLQMTTRHMVSQA 439
            SV    L    R  +S+A
Sbjct: 361 SSVDLIFLSTLERMRISRA 379


>At5g13210 unknown protein
          Length = 673

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)

Query: 51  PQNKKTP-AWKKLNSKELGLRNSMIAHPTKRVLSTLKKK---GYDVYLVGGC-------- 98
           P +K+ P A + L       +N   A   +  L   KKK   G D +    C        
Sbjct: 209 PSSKRKPVATRALRVANAERKNQ--AEKARASLDRKKKKVSMGKDAFTRYSCDPDYRYLH 266

Query: 99  --VRDLILKQTPKDFDILTSADLKEVMRSFSWCEIVGKRF 136
             V DL   Q  KD + LTS    E+  +  WC  +   F
Sbjct: 267 ERVSDLFANQLKKDLEFLTSDKPNEISLAAKWCPSLDSSF 306


>At1g25450 unknown protein
          Length = 492

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 19/88 (21%), Positives = 40/88 (44%), Gaps = 7/88 (7%)

Query: 137 PICHVHMDGTVVEVSSFNTNKFKPRTRFVHDIEAPNGCDNEDFLRWKNCLNRDFTINGLM 196
           P C   M G  + +S+  +++++ + +  H +    G D++ +    NC+      NG +
Sbjct: 265 PNCLFRMGGAAILLSNRRSDRWRAKYKLCHLVRTHRGADDKSY----NCVMEQEDKNGNV 320

Query: 197 FDPYAKIVYDYMGGMEDIVKAKVRTVVP 224
               +K   D M    + +KA + T+ P
Sbjct: 321 GINLSK---DLMTIAGEALKANITTIGP 345


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,254,184
Number of Sequences: 26719
Number of extensions: 468007
Number of successful extensions: 1389
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1369
Number of HSP's gapped (non-prelim): 13
length of query: 520
length of database: 11,318,596
effective HSP length: 104
effective length of query: 416
effective length of database: 8,539,820
effective search space: 3552565120
effective search space used: 3552565120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)


Lotus: description of TM0175.3