BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0172.5
(1213 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48710 hypothetical protein 803 0.0
At3g61330 copia-type polyprotein 803 0.0
At1g58140 hypothetical protein 795 0.0
At3g60170 putative protein 740 0.0
At1g32590 hypothetical protein, 5' partial 731 0.0
At2g15650 putative retroelement pol polyprotein 729 0.0
At3g25450 hypothetical protein 685 0.0
At3g59720 copia-type reverse transcriptase-like protein 685 0.0
At2g05390 putative retroelement pol polyprotein 618 e-177
At2g16000 putative retroelement pol polyprotein 579 e-165
At2g13930 putative retroelement pol polyprotein 567 e-161
At5g35820 copia-like retrotransposable element 565 e-161
At1g70010 hypothetical protein 559 e-159
At3g45520 copia-like polyprotein 554 e-157
At1g37110 554 e-157
At2g07550 putative retroelement pol polyprotein 553 e-157
At2g21460 putative retroelement pol polyprotein 535 e-152
At4g17450 retrotransposon like protein 512 e-145
At4g21360 putative transposable element 509 e-144
At4g03810 putative retrotransposon protein 484 e-136
>At1g48710 hypothetical protein
Length = 1352
Score = 803 bits (2074), Expect = 0.0
Identities = 426/1087 (39%), Positives = 651/1087 (59%), Gaps = 30/1087 (2%)
Query: 133 YQNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHT 192
Y S+ +C+ CG+FGH C ++++E+K+ + + K+ ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASEC--------KAPSNKKFEEKA---NYVEEKIQEEDMLLMA 322
Query: 193 SLRASSKED---WYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIG----K 245
S + +E+ WY DSG S HM G KS ++ + V GD +K +++G G +
Sbjct: 323 SYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR 382
Query: 246 LSDTGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKD 305
L + + +V + + N++S+ QL ++G + K + ++++ +++ + SK+
Sbjct: 383 LKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKN 442
Query: 306 NCYMWTSETTFLSARCL-MSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEG 364
++ A+CL M ++E +WH + GHLN ++ + +E VRG+P +
Sbjct: 443 RMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPN 499
Query: 365 KVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRF 424
+VC C +GKQ KMS K K LEL+H D+ GP++ +SLG Y + +DDFSR
Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 425 TWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEF 484
TWV FLKEKS+ FE+FK+ V++E G I +RSD G EF + +F ++C GI+ +
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 485 SAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVT 544
+ P +PQQNGV ERKNRT+ E AR+ML +K LP WAEA+ A Y+ NR + T
Sbjct: 620 TVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 545 QYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRT 604
E W G+K V + VFGS + E R KLD KSE IF+GY NS+ Y++YN T
Sbjct: 680 PQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 605 KVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQENTVSQPPLATK 664
K + S N+V D+ E +++ED + + EP + P +E T PP +
Sbjct: 740 KKTIISRNIVFDE-EGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTT--PPTSPT 796
Query: 665 EPSIRVQKIH--PKENIIGDLNDGVITRSRDLVSNACFISKVEPKNVKEALTDEFWIQSM 722
I P+ I +L + +T +++ ++ C ++ EP + +EA+ + W +M
Sbjct: 797 SSQIEESSSERTPRFRSIQELYE--VTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAM 854
Query: 723 QEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQGYSQIEGID 782
EE+ ++N+ WEL P+ +G KW+++ K + G V R K+RLVA+GY Q GID
Sbjct: 855 DEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGID 914
Query: 783 FYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFP 842
+ E FAPVARLE++RL++ +A K++++QMDVKSAFLNG L EEVY+EQP+G++
Sbjct: 915 YDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEE 974
Query: 843 DHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMVAQIYVDD 902
D V RLKKALYGLKQAPRAW R+ ++ + K + L++K ++++A +YVDD
Sbjct: 975 DKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDD 1034
Query: 903 IVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYAKGIVKKF 962
++F G + M E+F ++M EFEM+ +G ++Y+LG++VKQ ++ +FITQ YAK ++KKF
Sbjct: 1035 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 1094
Query: 963 GLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAVGVCARYQ 1022
++++ TP IKL+K E+G VDP+ ++S++GSL YLT +RPDI +AVGV +RY
Sbjct: 1095 KMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYM 1154
Query: 1023 AEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFF 1082
P T+H KRI++YI GT ++G+ YS ++ L GY D+DW G DDRKSTSG F+
Sbjct: 1155 EHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFY 1214
Query: 1083 LENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMT-LFCDNL 1141
+ + +W SKKQ V LST EAEY+AA S +W++ +LKE ++ Q+ T +F DN
Sbjct: 1215 IGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNK 1274
Query: 1142 SAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEK 1201
SAI ++KNP+ H R+KHID R+H+IRE V V LE+V T Q+ADIFTK L F K
Sbjct: 1275 SAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1334
Query: 1202 LRQLLGI 1208
+R LLG+
Sbjct: 1335 MRSLLGV 1341
>At3g61330 copia-type polyprotein
Length = 1352
Score = 803 bits (2073), Expect = 0.0
Identities = 422/1084 (38%), Positives = 647/1084 (58%), Gaps = 24/1084 (2%)
Query: 133 YQNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHT 192
Y S+ +C+ CG+FGH C ++++E+K+ + + + ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASEC--------KAPSNKKFEEKAHYVEEKIQEEDMLLMASYK 325
Query: 193 SLRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIG----KLSD 248
WY DSG S HM G KS ++ + V GD +K +++G G +L +
Sbjct: 326 KDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKN 385
Query: 249 TGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNCY 308
+ +V + + N++S+ QL ++G + K + ++++ +++ + SK+ +
Sbjct: 386 GDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMF 445
Query: 309 MWTSETTFLSARCL-MSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVC 367
+ A+CL M ++E +WH + GHLN ++ + +E VRG+P + +VC
Sbjct: 446 VLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVC 502
Query: 368 GECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFTWV 427
C +GKQ KMS K K LEL+H D+ GP++ +SLG Y + +DDFSR TWV
Sbjct: 503 EGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWV 562
Query: 428 EFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAP 487
FLKEKS+ FE+FK+ V++E G I +RSD G EF + +F ++C GI+ + + P
Sbjct: 563 YFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVP 622
Query: 488 ITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYE 547
+PQQNGVVERKNRT+ E AR+ML +K LP WAEA+ A Y+ NR + T E
Sbjct: 623 RSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQE 682
Query: 548 LWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVM 607
W G+KP V + VFGS + E R KLD KSE IF+GY NS+ Y++YN TK
Sbjct: 683 AWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKT 742
Query: 608 MESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQENTVSQPPLATKEPS 667
+ S N+V D+ E +++ED + + EP + P +E T PP +
Sbjct: 743 IISRNIVFDE-EGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTT--PPTSPTSSQ 799
Query: 668 IRVQKIH--PKENIIGDLNDGVITRSRDLVSNACFISKVEPKNVKEALTDEFWIQSMQEE 725
I P+ I +L + +T +++ ++ C ++ EP + ++A+ + W +M EE
Sbjct: 800 IEESSSERTPRFRSIQELYE--VTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEE 857
Query: 726 LGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQGYSQIEGIDFYE 785
+ ++N+ WEL P+ +G KW+++ K + G V R K+RLVA+GYSQ GID+ E
Sbjct: 858 IKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDE 917
Query: 786 TFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHV 845
FAPVARLE++RL++ +A K++++QMDVKSAFLNG L EEVY+EQP+G++ D V
Sbjct: 918 VFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKV 977
Query: 846 YRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMVAQIYVDDIVF 905
RLKK LYGLKQAPRAW R+ ++ + K + L++K ++++A +YVDD++F
Sbjct: 978 LRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIF 1037
Query: 906 GGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYAKGIVKKFGLE 965
G + + E+F ++M EFEM+ +G ++Y+LG++VKQ ++ +FITQ YAK ++KKF ++
Sbjct: 1038 TGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKID 1097
Query: 966 NAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAVGVCARYQAEP 1025
++ TP IKL+K E+G VDP+ ++S++GSL YLT +RPDI +AVGV +RY P
Sbjct: 1098 DSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHP 1157
Query: 1026 KTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLEN 1085
T+H KRI++YI GT ++G+ YS ++ L GY D+DW G DDRKSTSG F++ +
Sbjct: 1158 TTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGD 1217
Query: 1086 NLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMT-LFCDNLSAI 1144
+W SKKQ V+LST EAEY+AA S +W++ +LKE ++ Q+ T +F DN SAI
Sbjct: 1218 TAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAI 1277
Query: 1145 NISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQ 1204
++KNP+ H R+KHID R+H+IRE V V LE+V T Q+AD FTK L F K+R
Sbjct: 1278 ALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRS 1337
Query: 1205 LLGI 1208
LLG+
Sbjct: 1338 LLGV 1341
>At1g58140 hypothetical protein
Length = 1320
Score = 795 bits (2054), Expect = 0.0
Identities = 424/1085 (39%), Positives = 639/1085 (58%), Gaps = 58/1085 (5%)
Query: 133 YQNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHT 192
Y S+ +C+ CG+FGH C ++++E+K+ + + K+ ++
Sbjct: 274 YDKSSVKCYNCGKFGHYASEC--------KAPSNKKFEEKA---NYVEEKIQEEDMLLMA 322
Query: 193 SLRASSKED---WYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIG----K 245
S + +E+ WY DSG S HM G KS ++ + V GD +K +++G G +
Sbjct: 323 SYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR 382
Query: 246 LSDTGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKD 305
L + + +V + + N++S+ QL ++G + K + ++++ +++ + SK+
Sbjct: 383 LKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKN 442
Query: 306 NCYMWTSETTFLSARCL-MSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEG 364
++ A+CL M ++E +WH + GHLN ++ + +E VRG+P +
Sbjct: 443 RMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPN 499
Query: 365 KVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRF 424
+VC C +GKQ KMS K K LEL+H D+ GP++ +SLG Y + +DDFSR
Sbjct: 500 QVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 425 TWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEF 484
TWV FLKEKS+ FE+FK+ V++E G I +RSD G EF + +F ++C GI+ +
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 485 SAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVT 544
+ P +PQQNGV ERKNRT+ E AR+ML +K LP WAEA+ A Y+ NR + T
Sbjct: 620 TVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 545 QYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRT 604
E W G+KP V + VFGS + E R KLD KSE IF+GY NS+ Y++YN T
Sbjct: 680 PQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 605 KVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQENTVSQPPLATK 664
K + S N+V D+ E +++ED + + EP + P +E T PP +
Sbjct: 740 KKTIISRNIVFDE-EGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTT--PPTSPT 796
Query: 665 EPSIRVQKIHPKENIIGDLNDGVITRSRDLVSNACFISKVEPKNVKEALTDEFWIQSMQE 724
I K EP + +EA+ + W +M E
Sbjct: 797 SSQIE--------------------------------EKCEPMDFQEAIEKKTWRNAMDE 824
Query: 725 ELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQGYSQIEGIDFY 784
E+ ++N+ WEL P+ +G KW+++ K + G V R K+RLVA+GYSQ GID+
Sbjct: 825 EIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYD 884
Query: 785 ETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDH 844
E FAPVARLE++RL++ +A K++++QMDVKSAFLNG L EEVY+EQP+G++ D
Sbjct: 885 EVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDK 944
Query: 845 VYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMVAQIYVDDIV 904
V RLKKALYGLKQAPRAW R+ ++ + K + L++K ++++A +YVDD++
Sbjct: 945 VLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLI 1004
Query: 905 FGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYAKGIVKKFGL 964
F G + M E+F ++M EFEM+ +G ++Y+LG++VKQ ++ +FITQ YAK ++KKF +
Sbjct: 1005 FTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKM 1064
Query: 965 ENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAVGVCARYQAE 1024
+++ TP IKL+K E+G VDP+ ++S++GSL YLT +RPDI +AVGV +RY
Sbjct: 1065 DDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEH 1124
Query: 1025 PKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLE 1084
P T+H KRI++YI GT ++G+ YS ++ L GY D+DW G DDRKSTSG F++
Sbjct: 1125 PTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIG 1184
Query: 1085 NNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMT-LFCDNLSA 1143
+ +W SKKQ V+LST EAEY+AA S +W++ +LKE ++ Q+ T +F DN SA
Sbjct: 1185 DTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSA 1244
Query: 1144 INISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLR 1203
I ++KNP+ H R+KHID R+H+IRE V V LE+V T Q+ADIFTK L F K+R
Sbjct: 1245 IALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMR 1304
Query: 1204 QLLGI 1208
LLG+
Sbjct: 1305 SLLGV 1309
>At3g60170 putative protein
Length = 1339
Score = 740 bits (1911), Expect = 0.0
Identities = 406/1110 (36%), Positives = 636/1110 (56%), Gaps = 31/1110 (2%)
Query: 133 YQNSTWRCHYCGRFGHIRPY--CFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIA 190
++ S R GR G R C+K + Q E+EK + + + + +
Sbjct: 230 FRGSRGRGRGRGRSGTNRAIVECYKCHNLGHFQYECPEWEKNA-NYAELEEEEELLLMAY 288
Query: 191 HTSLRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIG--KLSD 248
+A+ E W+ DSGCS HMTG K + +++ V G+ + + G G K+
Sbjct: 289 VEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKV 348
Query: 249 TGSPN-LDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNC 307
G + +V V L NL+S+ QL ++GL ++ + C V + +K +M S +
Sbjct: 349 NGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRM 408
Query: 308 YMWTSETTFLSARCLMSKE---DEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEG 364
+ + ++ CL ++E E +WH + GHLN + +K + ++ V G+P LK +
Sbjct: 409 FFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATK- 467
Query: 365 KVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRF 424
++C C GKQ + S K +S L+L+H D+ GP+ S GKRY+ +DDF+R
Sbjct: 468 EICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRK 527
Query: 425 TWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEF 484
TWV FL EKS+ F FK V++E G+ + +R+D G EF + +F EFC S GI +
Sbjct: 528 TWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQL 587
Query: 485 SAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVT 544
+A TPQQNGV ERKNRT+ + R+ML + +P FW+EA + +I NR + +T
Sbjct: 588 TAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMT 647
Query: 545 QYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRT 604
E W G+KP V+YF VFG Y+ + R KLD KS+ +FLG S S+A+R+Y+
Sbjct: 648 PEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVM 707
Query: 605 KVMMESINVVVDDTSNERTGQAHDE-DDLPYEC------TNVEPDEP-AIQFPNE--QEN 654
K ++ S +VV D+ + QA E ++ EC N E EP A+ PN +N
Sbjct: 708 KKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDN 767
Query: 655 TVSQPPL---ATKEPSIRVQKIHPKENIIGDLNDGVITRSRDLVSNAC-----FISKVEP 706
VS P+ ++ PS K+ + G + D ++ N +++ +P
Sbjct: 768 NVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADP 827
Query: 707 KNVKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRN 766
+A+ D+ W ++M+ E+ +N WEL P +G KW+++ K +E G V +
Sbjct: 828 IQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKY 887
Query: 767 KSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNE 826
K+RLVA+GY+Q GID+ E FAPVARL+++R +L ++ + ++Q+DVKSAFL+G L E
Sbjct: 888 KARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKE 947
Query: 827 EVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFV 886
EVYV QP+GF+ + VY+L+KALYGLKQAPRAWY R+ + + +++ + TLF
Sbjct: 948 EVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFT 1007
Query: 887 KKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDT 946
K G +++ +YVDD++F G M ++F + M EFEMS +G++ +FLG++VKQ +
Sbjct: 1008 KTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGG 1067
Query: 947 LFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTA 1006
+FI Q +YA+ ++ +FG++ + + P KLTKDE G VD ++++ ++GSL+YLT
Sbjct: 1068 IFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTV 1127
Query: 1007 SRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSG--LTGYCDA 1064
+RPD+ + V + +R+ + P+ SH + KRI++Y+ GT + GI Y N L + D+
Sbjct: 1128 TRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDS 1187
Query: 1065 DWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQML 1124
D+AG +DR+STSG F + + I W SKKQ V+LST EAEYIAA Q +W++++L
Sbjct: 1188 DYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVL 1247
Query: 1125 KEYNVQQDVMTLF-CDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTE 1183
++ ++ T+ CDN S I +SK+P+ H ++KHI++R H++R+LV V LE+ TE
Sbjct: 1248 EKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTE 1307
Query: 1184 KQLADIFTKALDATQFEKLRQLLGICLFEE 1213
Q+ADIFTK L QFEKLR LLG+ E
Sbjct: 1308 DQVADIFTKPLKLEQFEKLRALLGMVNMSE 1337
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 731 bits (1888), Expect = 0.0
Identities = 422/1114 (37%), Positives = 617/1114 (54%), Gaps = 83/1114 (7%)
Query: 131 RNYQN-STWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALI 189
R Y N T C C + GH + C +EK++ + L+
Sbjct: 202 RGYVNRDTVECFKCHKMGHYKAEC-------------PSWEKEA----NYVEMEEDLLLM 244
Query: 190 AHTS-LRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLS- 247
AH + K+ W+ DSGCS HM G + + ++ K V GD + + G GKL
Sbjct: 245 AHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRL 304
Query: 248 --DTGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKN-KDVLMRGARSK 304
D + DV V GL NL S+ QL +GL+ + + C V +K K ++M +K
Sbjct: 305 EVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTK 364
Query: 305 DNCYMW------TSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPK 358
+ ++ + ET RCL +WH++ GHLN + ++ + +E V+G+PK
Sbjct: 365 NRMFVVFAAVKKSKETE--ETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPK 422
Query: 359 LKI-QEGKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVC 417
+ +E VC C GKQ++ S K +++VL+L+H D+ GP+ S GKRY+
Sbjct: 423 FDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNF 482
Query: 418 VDDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSS 477
+DDFSR W L EKS+TF+ FKE +V+RE G +V +RSD G E+ + +F E+C
Sbjct: 483 IDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKE 542
Query: 478 EGIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTI 537
GIK + +A TPQQNGV ERKNR++ R ML ++P FW EA+ A YI NR
Sbjct: 543 FGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPS 602
Query: 538 RQGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAY 597
+ + +T E W KP+V++ +FGS Y L + R KLD KS + G S S+AY
Sbjct: 603 KALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAY 662
Query: 598 RVYNIRTKVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEP---DEPAIQF------ 648
R+Y+ T ++ S +V D+ E++L ++ ++ EP + P I
Sbjct: 663 RLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQ 722
Query: 649 --PNEQENTVSQ------PPLATKEPSIRVQKIHPKENIIGDLNDGVITRSRDLVSNACF 700
E+E TV++ P + T R Q + K+ ++G+ +IT+ + A F
Sbjct: 723 EETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV-LITQDEEDEVLALF 781
Query: 701 ISKVEPKNVKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDES 760
I +P +EA E W ++M+ E+ + N WELV P++A V+G KWIF+ K +E
Sbjct: 782 IGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEK 841
Query: 761 GNVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFL 820
G V + K+RLVA+GY Q G+DFYE FAPVA+ ++IRL+LG+A + ++Q+DVKSAFL
Sbjct: 842 GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 901
Query: 821 NGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGI 880
+G L E+V+VEQPKGF VY+LKKALYGLKQAPRAWY R+ EF G++K
Sbjct: 902 HGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYC 961
Query: 881 DKTLFVKKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQV 940
+ TLFVKK + +V +YVDD+++ G S +M+E F M EF M+ +G++ YFLG++V
Sbjct: 962 EHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEV 1021
Query: 941 KQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGS 1000
Q E +FI Q KYA I+KK+G+E + P KLTK
Sbjct: 1022 IQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK------------------ 1063
Query: 1001 LLYLTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTG 1060
G +RY P HL+ VKRI++Y+ GT D GI Y + L G
Sbjct: 1064 --------------AGAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVG 1109
Query: 1061 YCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWM 1120
+ D+D+AG DDRKSTSG F L I+W SKKQ V+LST EAE+++A Q +W+
Sbjct: 1110 FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWL 1169
Query: 1121 KQMLKEYNVQQDVMTL-FCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEH 1179
+ +L+E +Q+ TL FCDN S I +SKNP+ H R+KHI +R+HF+RELV++GT+ L++
Sbjct: 1170 RNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDY 1229
Query: 1180 VSTEKQLADIFTKALDATQFEKLRQLLGICLFEE 1213
+T Q+ADI TKA+ FE+LR +G+ EE
Sbjct: 1230 CTTTDQVADIMTKAVKREVFEELRGRMGVRRREE 1263
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 729 bits (1882), Expect = 0.0
Identities = 401/1114 (35%), Positives = 623/1114 (54%), Gaps = 78/1114 (7%)
Query: 134 QNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHTS 193
+ S +C+ CG+ GH C R K+ + + VN ++ S
Sbjct: 268 KRSNIKCYKCGKIGHYANEC-------------RSKNKERAHVTLEEEDVNEDHMLFSAS 314
Query: 194 LRASS--KED-WYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLSDT- 249
S+ +ED W DSGC+ HMT + Y + K + +G G G ++
Sbjct: 315 EEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMT 374
Query: 250 --GSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNC 307
G + +V LV GL NL+S+ Q+ G V F+ C++++ N +M + +
Sbjct: 375 RHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMNIEMTDKSF 434
Query: 308 YMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVC 367
+ S + + + WH++LGH++ K ++++ +E V G+P+ K+ + + C
Sbjct: 435 KIKLSS---VEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTK-ETC 490
Query: 368 GECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFTWV 427
C +GKQ + S K T + LE++H D+ GPMQ +S+ G RY + +DD++ WV
Sbjct: 491 KACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWV 550
Query: 428 EFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAP 487
FLK+KS+TF FK+ V+++ I +R FC EGI + + P
Sbjct: 551 YFLKQKSETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLP 600
Query: 488 ITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQ-GDTVTQY 546
+PQQNG ERKNR+L E AR+ML ++LP WAEA+ T+ Y+ NR+ + D VT
Sbjct: 601 YSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPM 660
Query: 547 ELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKV 606
E W G KP V + +FGS CY+ + RRKLD K++ GI +GYS ++ YRV+ + +
Sbjct: 661 EKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEK 720
Query: 607 MMESINVV-------------------------VDDTSNERTGQAHDEDDLPYECTNVEP 641
+ S +VV + ++ +++ +HD + N E
Sbjct: 721 VEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEG 780
Query: 642 DEPA---IQFPNEQENTVSQPPLATKEPSIRVQKIHPKENIIGDLNDGVITRSRDLVSNA 698
+ + Q +++E S+ P K ++K EN + G+ A
Sbjct: 781 ETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMEN--DEAAQGI---------EA 829
Query: 699 CFISKVEPKNVKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSD 758
C ++ EP+ EA D+ W ++M EE+ ++N W+LV +P+ NV+ KWI++ K+D
Sbjct: 830 CLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTD 889
Query: 759 ESGNVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSA 818
SGN ++K+RLVA+G+SQ GID+ ETFAPV+R ++IR LL A +K+RLYQMDVKSA
Sbjct: 890 ASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSA 949
Query: 819 FLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKG 878
FLNG L EEVYV QP GFV + V RL KALYGLKQAPRAWYER+ + I NG+ +
Sbjct: 950 FLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARS 1009
Query: 879 GIDKTLFVKKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGL 938
D L+ KK G ++++ +YVDD++ G + ++ F + MK EFEM+ +G L YFLG+
Sbjct: 1010 MNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGM 1069
Query: 939 QVKQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTD---VDPSLYR 995
+V Q + +F++Q KYA ++ KFG++ + TP K K +G D DP+ YR
Sbjct: 1070 EVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGK-RKGVEGDDKEFADPTKYR 1128
Query: 996 SMIGSLLYLTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTN 1055
++G LLYL ASRPD+ +A +RY + P H + KR+++Y+ GTS++G+L++
Sbjct: 1129 RIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKET 1188
Query: 1056 SGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCT 1115
L GY D+DW GS +D+KST+G F L + W S KQ V+ STAEAEYIA ++
Sbjct: 1189 PRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATN 1248
Query: 1116 QLMWMKQMLKEYNVQ-QDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGT 1174
Q +W++++ +++ ++ ++ + + CDN SAI I +NP+QH RTKHI+I++HF+RE G
Sbjct: 1249 QAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGL 1308
Query: 1175 VTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
+ LE+ E QLAD+ TKAL ++FE LR+ LG+
Sbjct: 1309 IQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
>At3g25450 hypothetical protein
Length = 1343
Score = 685 bits (1768), Expect = 0.0
Identities = 378/1051 (35%), Positives = 603/1051 (56%), Gaps = 37/1051 (3%)
Query: 189 IAHTSLRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKL-- 246
I T L + WY D+G S HMTG +++ K+ V FGD + I+G G +
Sbjct: 279 IRPTELESCINNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPF 338
Query: 247 -SDTGSPN-LDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSK 304
S G L DV + L +N++S+ Q + G + ++ + ++ ++L++ RS+
Sbjct: 339 ISKGGERKILFDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSR 398
Query: 305 DNCYMWTSETTFLSARCL-MSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQE 363
+ Y + E +++CL ++ +E IWH +LGH++ +++K ++ +E V GI QE
Sbjct: 399 NRLYKVSLEVE--NSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQE 456
Query: 364 GKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSR 423
+ CG C GKQ + S K ++VLEL+H DL GP+ + KRYVFV +DD SR
Sbjct: 457 KETCGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSR 516
Query: 424 FTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHE 483
+ W LKEKS+ F FKE V++E G+ I R+D G EF + +F EFC+ EGI
Sbjct: 517 YMWSILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRH 576
Query: 484 FSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTV 543
+AP TPQQNGVVER+NRTL R++L N+P + W EA+ + Y+ NRV R
Sbjct: 577 LTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQ 636
Query: 544 TQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIR 603
T YE++K KKP V++ VFG Y + + +KLD +S + ++LG S+AYR+ +
Sbjct: 637 TPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPT 696
Query: 604 TKVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNE--QENTVSQPPL 661
+ + S +VV D+ + ++ E D + E F N EN +S P
Sbjct: 697 KRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSE----FGNNGVTENDISTEPE 752
Query: 662 ATKEPSIR------VQKIHPKENIIGDLNDGVITRSRDLVSNACFISKV----------- 704
T+E I +++ +E+ + RS+ V ++
Sbjct: 753 ETEEAEINGEDENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHL 812
Query: 705 ------EPKNVKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSD 758
EP + KEA + W + +EE+ ++N W LV P + +G KW+F+ K +
Sbjct: 813 LLAVNDEPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHN 872
Query: 759 ESGNVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSA 818
G++ + K+RLVA+GY Q G+DF E FAPVAR+E++RL++ +A + ++ +DVK+A
Sbjct: 873 SDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTA 932
Query: 819 FLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKG 878
FL+G L E+VYV QP+GF + + VY+L KALYGL+QAPRAW +L E L ++K
Sbjct: 933 FLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKC 992
Query: 879 GIDKTLFVKKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGL 938
+ +L+ K+ G ++V +YVDD++ G + ++ F + M +FEMS +G+LTY+LG+
Sbjct: 993 HKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGI 1052
Query: 939 QVKQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMI 998
+V Q +D + + Q +YAK I+++ G+ TP ++L+K + +D + YR I
Sbjct: 1053 EVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNI 1112
Query: 999 GSLLYLTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGL 1058
G L YL +RPD+++ VG+ +RY EP+ SH +K+I++Y+ GT+ +G+ + N+GL
Sbjct: 1113 GCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGL 1172
Query: 1059 TGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLM 1118
GY D+ DD KST G F+L + I+W S+KQ V+LS+ EAE++AA + Q +
Sbjct: 1173 IGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAI 1232
Query: 1119 WMKQMLKE-YNVQQDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTL 1177
W++++L E + + +T+ DN SAI ++KNP+ H R+KHI R+HFIRE VE+G + +
Sbjct: 1233 WLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEV 1292
Query: 1178 EHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
EHV +Q ADI TKAL +F ++R+L+G+
Sbjct: 1293 EHVPGVRQKADILTKALGKIKFLEMRELIGV 1323
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 685 bits (1767), Expect = 0.0
Identities = 395/1094 (36%), Positives = 595/1094 (54%), Gaps = 124/1094 (11%)
Query: 133 YQNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHT 192
Y S+ +C+ CG+FGH C K+P ++K K N
Sbjct: 274 YDKSSVKCYNCGKFGHYASEC------------------KAPSNKKFKEKANYVEEKIQE 315
Query: 193 S---LRASSKED-------WYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRG 242
L AS K+D WY DSG S HM G KS ++ + V GD +K +++G
Sbjct: 316 EDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKG 375
Query: 243 IG----KLSDTGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLM 298
G +L + + +V + + N++S+ QL ++G + K + +++K +++
Sbjct: 376 KGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLIT 435
Query: 299 RGARSKDNCYMWTSETTFLSARCL-MSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIP 357
+ SK+ ++ A+CL M ++E +WH + GHLN ++ + +E VRG+P
Sbjct: 436 KVPMSKNRMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLP 493
Query: 358 KLKIQEGKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVC 417
+ +VC C +G Q KMS K K LEL+H D+ GP++ +SLG Y +
Sbjct: 494 CIN-HPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLF 552
Query: 418 VDDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSS 477
+DDFSR TWV FLKEKS+ FE+FK+ V++E G I +RSD G EF + +F ++C
Sbjct: 553 IDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCED 612
Query: 478 EGIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTI 537
GI+ + + P +PQQNGV ERKNRT+ E AR+ML +K LP WAEA+ A Y+ NR
Sbjct: 613 NGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPT 672
Query: 538 RQGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAY 597
+ T E W G+KP V + VFGS + E R KLD KSE IF+GY NS+ Y
Sbjct: 673 KSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGY 732
Query: 598 RVYNIRTKVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQENTVS 657
++YN TK + S N+V D+ E +++ED + + EP + P +E T
Sbjct: 733 KLYNPDTKKTIISRNIVFDE-EGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTT- 790
Query: 658 QPPLATKEPSIRVQKIH--PKENIIGDLNDGVITRSRDLVSNACFISKVEPKNVKEALTD 715
PP + I P+ I +L + +T +++ ++ C ++ EP + +EA+
Sbjct: 791 -PPTSPTSSQIEESSSERTPRFRSIQELYE--VTENQENLTLFCLFAECEPMDFQEAIEK 847
Query: 716 EFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQGY 775
+ W +M EE+ ++N+ WEL P+ +G KW+++ K + G V R K+RLVA+GY
Sbjct: 848 KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 907
Query: 776 SQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKG 835
SQ GID+ E FAPVARLE++RL++ +A K++++QMDVKSAFLNG L EEVY+EQP+G
Sbjct: 908 SQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967
Query: 836 FVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMV 895
++ D V RLKK LYGLKQAPRAW R+ ++ + K + L++K ++++
Sbjct: 968 YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILI 1027
Query: 896 AQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYA 955
A +YVDD++F G + M E+F ++M EFEM+ +G ++Y+LG++VKQ ++ +FITQ YA
Sbjct: 1028 ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1087
Query: 956 KGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAV 1015
K ++KKF ++ D +PSL +GSL YLT +RPDI +AV
Sbjct: 1088 KEVLKKFKMD----------------------DSNPSL----VGSLRYLTCTRPDILYAV 1121
Query: 1016 GVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKS 1075
GV +RY P T+H KRI++YI GT ++G+ YS ++ L C A W
Sbjct: 1122 GVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV-VCHAIW--------- 1171
Query: 1076 TSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMT 1135
++ +LKE ++ Q+ T
Sbjct: 1172 --------------------------------------------LRNLLKELSLPQEEPT 1187
Query: 1136 -LFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKAL 1194
+F DN SAI ++KNP+ H R+KHID R+H+IRE V V LE+V T Q+ADIFTK L
Sbjct: 1188 KIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPL 1247
Query: 1195 DATQFEKLRQLLGI 1208
F K+R LLG+
Sbjct: 1248 KREDFIKMRSLLGV 1261
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 618 bits (1593), Expect = e-177
Identities = 371/1105 (33%), Positives = 588/1105 (52%), Gaps = 60/1105 (5%)
Query: 140 CHYCGRFGHIRPYCF-KLYGYPILQDVSREYEKKSPGKSRWKPKV---NATALIAHTSLR 195
C+ C + GH C +L Q+ + E +S +V N + +
Sbjct: 215 CYRCDKTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERS-VKPKEFE 273
Query: 196 ASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGK--LSDTGS-- 251
A S WY D+G S HMTG + K+ V FGD ++ I+G G L G
Sbjct: 274 ACSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIR 333
Query: 252 PNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNCYMWT 311
L DV + L +N+IS+ Q + G V K + ++ +L+R RS++ Y
Sbjct: 334 KTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLY--- 390
Query: 312 SETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGECQ 371
+ ++ + + K L +M R + IPK E + CG C
Sbjct: 391 --------------KVDLNVENVKCLQLEAATMVRKELVIGISNIPK----EKETCGSCL 432
Query: 372 IGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFTWVEFLK 431
+GKQ + K S+VLEL+H DL GP+ + KRY+ V +DD +R+ W LK
Sbjct: 433 LGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLK 492
Query: 432 EKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPITPQ 491
EKS+ FE F++ +V++E G I R+D G EF + +F +FC+ EGI +AP TPQ
Sbjct: 493 EKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQ 552
Query: 492 QNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELWKG 551
QNGVVER+NRTL R++L +P + W EA+ + YI NRV R T YE++K
Sbjct: 553 QNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQ 612
Query: 552 KKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVMMESI 611
+KP V++ VFG Y + H RKLD +S++ ++LG S+AYR+ + + +++
Sbjct: 613 RKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWN 672
Query: 612 NVVVDDTSNERTGQ------------AHDEDDLPYECTNVEPD----EPAIQFPNEQENT 655
N D + + +G + DD+ E E + E NEQE
Sbjct: 673 NS--DSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQI 730
Query: 656 ---VSQPPLATKEPSIRVQKIHPKENIIGDLN--DGVITRSRDLVSNACFISKVEPKNVK 710
+QP AT P++R +G N D + + EP + K
Sbjct: 731 DAEETQPSHATPLPTLR-----RSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFK 785
Query: 711 EALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRL 770
EA + W + +EE+ ++N+ W L+ P V+G KW+F+ K + G++ + K+RL
Sbjct: 786 EANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARL 845
Query: 771 VAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYV 830
VA+GY Q GID+ E FA VAR+E+IR+++ +A + ++ +DVK+AFL+G L E+VYV
Sbjct: 846 VAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYV 905
Query: 831 EQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNG 890
QP+GF + VY+L KALYGLKQAPRAW +L + L + K + +++ ++
Sbjct: 906 TQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEE 965
Query: 891 GELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFIT 950
+L++ IYVDD++ G S ++ F + M +FEMS +G+LTY+LG++V ++ + +
Sbjct: 966 KKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILR 1025
Query: 951 QSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPD 1010
Q +YA I+++ G+ N P A ++L K ++ + YR MIG L Y+ +RPD
Sbjct: 1026 QERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTRPD 1085
Query: 1011 ITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSA 1070
+++ VGV +RY +P+ SH +K++++Y+ GT +G+ SGL GY D+ +
Sbjct: 1086 LSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSADL 1145
Query: 1071 DDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEY-NV 1129
DD KST+G F+L I+W S+KQ V+LS+ EAE++AA + Q +W++ + E
Sbjct: 1146 DDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGT 1205
Query: 1130 QQDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADI 1189
+ + + DN SAI ++KN + H R+KHI R+HFIRE VE+ V ++HV +Q ADI
Sbjct: 1206 TSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADI 1265
Query: 1190 FTKALDATQFEKLRQLLGI-CLFEE 1213
TK L +F ++R+L+G+ C+ E+
Sbjct: 1266 LTKPLGRIKFREMRELVGVQCVLED 1290
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 579 bits (1493), Expect = e-165
Identities = 338/1032 (32%), Positives = 540/1032 (51%), Gaps = 33/1032 (3%)
Query: 198 SKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLSDTGSPNLDDV 257
S W DSG + H++ +S + S V G KI G+G L L +V
Sbjct: 427 SSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNV 486
Query: 258 LLVEGLTANLISISQLCDQ-GLKVVFKQSGCVVKNKNKDVLMRGARSKDNCYMWTSETTF 316
L + NLISIS L D G +V+F ++ C +++ K ++ R N Y+
Sbjct: 487 LFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGDQS 546
Query: 317 LSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGECQIGKQV 376
+S ++ ++ +WH++LGH S++R+ A G + K + C C + KQ
Sbjct: 547 ISVNAVV----DISMWHRRLGHA---SLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQR 599
Query: 377 KMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFTWVEFLKEKSDT 436
K+S + ++ +LLH+D+ GP VE++ G +Y VDD SR TW+ LK KS+
Sbjct: 600 KLSFPT-SNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEV 658
Query: 437 FEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPITPQQNGVV 496
VF QV+ + + +RSD+ E + F+ F + +GI S P TP+QN VV
Sbjct: 659 LTVFPAFIQQVENQYKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQNSVV 715
Query: 497 ERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELWKGKKPTV 556
ERK++ + ARA++ +P W + + TA ++ NR + T YE+ G P
Sbjct: 716 ERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVY 775
Query: 557 KYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVMMESINVVVD 616
+ FG CY + + R K P+S +FLGY + Y++ ++ + + S NV
Sbjct: 776 EQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFH 835
Query: 617 DTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQENTVSQPPLATKEPSIRVQKIHPK 676
+ E L T + P I + ++ P I Q++
Sbjct: 836 EEVFPLAKNPGSESSLKL-FTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQRVRKP 894
Query: 677 ENIIGDLN------------DGVITRSRDLVSNACFISKVE----PKNVKEALTDEFWIQ 720
+ D + I+ S+ S+ C+I+ + P N EA + W +
Sbjct: 895 PAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCE 954
Query: 721 SMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQGYSQIEG 780
++ E+G ++ WE+ P VG KW+F K GN+ R K+RLVA+GY+Q EG
Sbjct: 955 AVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEG 1014
Query: 781 IDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPS 840
+D+ +TF+PVA++ +I+LLL V+ K+ L Q+DV +AFLNG L EE++++ P+G+ +
Sbjct: 1015 LDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERK 1074
Query: 841 ---FPDH-VYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMVA 896
P + V RLK+++YGLKQA R W+++ + L++ G+ K D TLF+K GE ++
Sbjct: 1075 GIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIV 1134
Query: 897 QIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYAK 956
+YVDDIV S Q E++ F++ +G+L YFLGL+V + + I Q KYA
Sbjct: 1135 LVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYAL 1194
Query: 957 GIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAVG 1016
+++ G+ P ++K+ KD+ D YR ++G L+YLT +RPDITFAV
Sbjct: 1195 ELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVN 1254
Query: 1017 VCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKST 1076
++ + P+T+HL R+++YI GT G+ YS +++ L G+ D+DWA D R+ST
Sbjct: 1255 KLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRST 1314
Query: 1077 SGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTL 1136
+ F+ ++LISW SKKQ+ VS S+AEAEY A + +++W+ +L V L
Sbjct: 1315 TSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPIL 1374
Query: 1137 FCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDA 1196
+ D+ +AI I+ NP+ H RTKHI + H +RE +++G + L HV TE Q+ADI TK L
Sbjct: 1375 YSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFP 1434
Query: 1197 TQFEKLRQLLGI 1208
QFE L+ + I
Sbjct: 1435 YQFEHLKSKMSI 1446
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 567 bits (1461), Expect = e-161
Identities = 360/1127 (31%), Positives = 574/1127 (49%), Gaps = 73/1127 (6%)
Query: 140 CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSR--WKPKVNATALIAHTSLRAS 197
C CG+ GH + C+K + + + S KS + P + A + S
Sbjct: 221 CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDS 280
Query: 198 SKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKL----SDTGSPN 253
+W D+GCS HMT K + + K + +V G+ ++GIG + SD
Sbjct: 281 IANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVI 340
Query: 254 LDDVLLVEGLTANLISISQLCDQGLKVVFK-QSGCVVKNKNKDVLMRGARSKDNCYMWTS 312
L DV + +T NLIS+ L D+G FK Q G + K +++G + +D Y+
Sbjct: 341 LTDVRYMPNMTRNLISLGTLEDRGCW--FKSQDGILKIVKGCSTILKGQK-RDTLYILDG 397
Query: 313 ETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGECQI 372
T + +DE +WH +LGH++ K M+ +V + +R + I+E + C +C
Sbjct: 398 VTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLR---REVIKELEFCEDCVY 454
Query: 373 GKQVKMSHQKLQHLTTSKVLELLHMDLMG-PMQVESLGGKRYVFVCVDDFSRFTWVEFLK 431
GKQ ++S QH+T K L +H DL G P SLG +Y VDD+SR W+ FL+
Sbjct: 455 GKQHRVSFAPAQHVTKEK-LAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLR 513
Query: 432 EKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPITPQ 491
+K + FE F E V+ + + K+R+D+G E+ N F +FC EGI + TPQ
Sbjct: 514 KKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQ 573
Query: 492 QNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELWKG 551
QNG+ ER NRT+ + R+ML + FWAEA +TA Y+ NR + E W G
Sbjct: 574 QNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTG 633
Query: 552 KKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVMMESI 611
P + FG YI +D+ KL+P+S+ GIF Y + Y+V+ + K + S
Sbjct: 634 ALPDLSSLRKFGCLAYIHADQG---KLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISR 690
Query: 612 NVVVDDT--------SNERTGQAHDEDDLPYECTNVEPDEPAIQFP----------NEQE 653
NV+ + ++ T D +DL V PD +F N E
Sbjct: 691 NVIFREQVMFKDLKGDSQNTISESDLEDL-----RVNPDMNDQEFTDQGGATQDNSNPSE 745
Query: 654 NTVSQPPLATKEPSIRVQKIHPKEN-IIGDLNDGVITRSR--------------DLVSNA 698
T S P+ + ++ +++ + DL+ + R R ++V A
Sbjct: 746 ATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFA 805
Query: 699 CFIS---KVEPKNVKEALTD---EFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWI 752
+ K EPK+ +EAL D E W +M+EE+ +N W+LV +P+ ++G +W+
Sbjct: 806 YYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWV 865
Query: 753 FRNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLY 811
F K+ G R +RLVA+G++Q EG+D+ E F+PV + SIR LL + L
Sbjct: 866 FTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQ 925
Query: 812 QMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLI 871
QMDVK+AFL+G+L EE+Y+ QP+GF + V LK++LYGLKQ+PR W R EF+
Sbjct: 926 QMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMR 985
Query: 872 NNGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVG 930
Y + D ++ KK NG + +YVDD++ + V + + + EFEM +G
Sbjct: 986 GIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLG 1045
Query: 931 ELTYFLGLQVKQMEDT--LFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTK------ 982
+ LG+++ + D L ++Q Y K +++ F ++NA TP H KL
Sbjct: 1046 DAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEY 1105
Query: 983 DEKGTDVDPSLYRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYIS 1041
+E+ + Y + IGS++Y + +RPD+ +++GV +R+ ++P H VK +++Y+
Sbjct: 1106 EEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Query: 1042 GTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLS 1101
GT + + + L GYCD+D+ + D R+S +G F + N ISW SK Q V++S
Sbjct: 1166 GTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAIS 1225
Query: 1102 TAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHSRTKHIDI 1161
+ EAEY+A + + +W+K E QD + + D+ SAI ++KN + H RTKHIDI
Sbjct: 1226 STEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDI 1285
Query: 1162 RHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
R HFIR+++ G + + ++TE A+IFTK + +FE +L +
Sbjct: 1286 RLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFEGALNMLRV 1332
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 565 bits (1456), Expect = e-161
Identities = 349/1126 (30%), Positives = 576/1126 (50%), Gaps = 94/1126 (8%)
Query: 140 CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKV------NATALIAHTS 193
C CG+ GH + C+ V +E K+ R + +A AL+ +
Sbjct: 251 CWICGKEGHFKKQCY----------VWKERNKQGSTSERGEASTVTARVTDAAALVVSRA 300
Query: 194 LRASSK---EDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIG----KL 246
L ++ + W D+GCS HMT K ++ K A V G+ +++GIG K
Sbjct: 301 LLGFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKN 360
Query: 247 SDTGSPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDN 306
D + L DV + ++ NLIS+ L D+G K+ G + KN ++ G + +
Sbjct: 361 EDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKK-GILTIFKNDLTVLTG-KKEST 418
Query: 307 CYMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKV 366
Y T A + ++DE +WH +LGH+ K ++ +V++
Sbjct: 419 LYFLQGTTLAGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKG--------------- 463
Query: 367 CGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVE-SLGGKRYVFVCVDDFSRFT 425
+ K + +S +H+T K L+ +H DL G V S+G +Y +DDF+R T
Sbjct: 464 ----HLDKNIMISFGAAKHVTKDK-LDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRT 518
Query: 426 WVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFS 485
W+ F++ K + F F E Q++ ++ + + +D+G EF N +F FC EG+ +
Sbjct: 519 WIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRT 578
Query: 486 APITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQ 545
TPQQNGV ER NRT+ R ML L FWAEA +TA ++ N+ +
Sbjct: 579 CAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIP 638
Query: 546 YELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTK 605
E W G P K FGS YI SD+ KL+P+++ GIFLGY + ++V+ + +
Sbjct: 639 EEKWTGHPPDYKILKKFGSVAYIHSDQG---KLNPRAKKGIFLGYPDGVKRFKVWLLEDR 695
Query: 606 VMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPN---------EQENTV 656
+ S ++V + + Q +D + + T VE I+ N E +
Sbjct: 696 KCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVE--RTLIELKNLSADDENQSEGGDNS 753
Query: 657 SQPPLATKEPSIRVQKIHPKENIIGDLNDGVITRSR----------------DLVSNACF 700
+Q +T + + +++ ++ L + ++ R R LV A
Sbjct: 754 NQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALT 813
Query: 701 ISK----VEPKNVKEALTD---EFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIF 753
+++ EP+ +EA+ E W Q+ EE+ K+N+ W+++ +P+ V+G KWIF
Sbjct: 814 MTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIF 873
Query: 754 RNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQ 812
+ K+ G R K+RLVA+G+SQ EGID+ E F+PV + SIR LL + L Q
Sbjct: 874 KRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQ 933
Query: 813 MDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLIN 872
+DVK+AFL+G L+E + + QP+G+ D + V LKK+LYGLKQ+PR W +R F+IN
Sbjct: 934 LDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMIN 993
Query: 873 NGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGE 931
+GY + + ++ ++ N G + +YVDD++ + +++ E + EFEM +G
Sbjct: 994 SGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGP 1053
Query: 932 LTYFLGLQVKQMEDT--LFITQSKYAKGIVKKFGLENAGHKRTPAATHIKL-TKDEKGTD 988
LG+++ + + L ++QS+Y G+++ FG++ + +TP H KL +EK
Sbjct: 1054 ARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLA 1113
Query: 989 VDPSL-----YRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISG 1042
D Y + IGS++Y + SRPD+ + VGV +R+ ++P H VK +++Y+ G
Sbjct: 1114 RDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKG 1173
Query: 1043 TSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLST 1102
T D + + + + GYCD+D+A D R+S +G F N ISW S Q V+LST
Sbjct: 1174 TQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALST 1233
Query: 1103 AEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHSRTKHIDIR 1162
EAEY+A + + +W++ + E +QD + + CD+ SAI +SKN + H RTKHID+R
Sbjct: 1234 TEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVR 1293
Query: 1163 HHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
+HFIRE + DG + + +ST ADIFTK + ++ ++ +LL +
Sbjct: 1294 YHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRV 1339
>At1g70010 hypothetical protein
Length = 1315
Score = 559 bits (1440), Expect = e-159
Identities = 364/1129 (32%), Positives = 568/1129 (50%), Gaps = 92/1129 (8%)
Query: 140 CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHTSLRASSK 199
C YC R GH+ C+K +GYP +++ K S + + + ++ +TS+
Sbjct: 212 CSYCSRPGHVEDTCYKKHGYPTSFKSKQKFVKPSISANA---AIGSEEVVNNTSVSTG-- 266
Query: 200 EDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLSDTGSPN------ 253
D S+ V K++P + + ++ I SD S +
Sbjct: 267 -----DLTTSQIQQLVSFLSSKLQPPSTP-------VQPEVHSISVSSDPSSSSTVCPIS 314
Query: 254 ----------LDDVLLVEGLTANLISISQLC-DQGLKVVFKQSGCVVKNKNKDVLMRGAR 302
L+DVL + NL+S+S L G ++ F ++ CV+++ +++++ +
Sbjct: 315 GSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMGK 374
Query: 303 SKDNCYMWTSETTF---LSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKL 359
N Y+ ++ + ++ +WH++LGH S++++ ++ PK
Sbjct: 375 QVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGH---PSVQKLQPMSSLLSFPKQ 431
Query: 360 KIQEGKVCGECQIGKQVKM---SHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFV 416
K C C I KQ + SH +S+ +L+H+D GP V++ G RY
Sbjct: 432 KNNTDFHCRVCHISKQKHLPFVSHNN----KSSRPFDLIHIDTWGPFSVQTHDGYRYFLT 487
Query: 417 CVDDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCS 476
VDD+SR TWV L+ KSD V V+ + + I +RSD+ E F++F
Sbjct: 488 IVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYH 544
Query: 477 SEGIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVT 536
S+GI S P TPQQN VVERK++ + AR++ ++P +W + I TA Y+ NR+
Sbjct: 545 SKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLP 604
Query: 537 IRQGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRA 596
+ +E+ PT + VFG CY + + R K P+++ F+GY +
Sbjct: 605 APILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKG 664
Query: 597 YRVYNIRTKVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPD---EPAIQF----- 648
Y++ ++ T ++ S +VV + G DL E N PD P +Q
Sbjct: 665 YKLLDLETHSIIVSRHVVFHEELFPFLGS-----DLSQEEQNFFPDLNPTPPMQRQSSDH 719
Query: 649 --PNEQENTVSQPPLATKE---PSIRVQKIHPKENIIGDLND----GVITR--------- 690
P++ ++V P A P VQ H K L D V++
Sbjct: 720 VNPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFL 779
Query: 691 SRDLVSN------ACFISKVEPKNVKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDA 744
S D +++ AC EP N EA + W +M E + WE+ P D
Sbjct: 780 SYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADK 839
Query: 745 NVVGTKWIFRNKSDESGNVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVAC 804
+G +WIF+ K + G+V R K+RLVAQGY+Q EGID+ ETF+PVA+L S++LLLGVA
Sbjct: 840 RCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAA 899
Query: 805 LLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFV----DPSFPDHVYRLKKALYGLKQAPR 860
K L Q+D+ +AFLNG L+EE+Y+ P+G+ D P+ V RLKK+LYGLKQA R
Sbjct: 900 RFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASR 959
Query: 861 AWYERLTEFLINNGYDKGGIDKTLFVKKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQM 920
WY + + L+ G+ + D T F+K + G + +Y+DDI+ ++ V+ QM
Sbjct: 960 QWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQM 1019
Query: 921 KSEFEMSLVGELTYFLGLQVKQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKL 980
KS F++ +GEL YFLGL++ + + + I+Q KYA ++ + G P +
Sbjct: 1020 KSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVF 1079
Query: 981 TKDEKGTDVDPSLYRSMIGSLLYLTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYI 1040
D G V+ YR +IG L+YL +RPDITFAV A++ P+ +HL V +I++YI
Sbjct: 1080 AHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYI 1139
Query: 1041 SGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSL 1100
GT G+ YS + L Y +AD+ D R+STSG C FL ++LI W S+KQ+ VS
Sbjct: 1140 KGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSK 1199
Query: 1101 STAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMT-LFCDNLSAINISKNPIQHSRTKHI 1159
S+AEAEY + + +L+W+ LKE V T LFCDN +AI+I+ N + H RTKHI
Sbjct: 1200 SSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHI 1259
Query: 1160 DIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
+ H +RE + G L H++TE Q+AD FTK L + F +L +G+
Sbjct: 1260 ESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGL 1308
>At3g45520 copia-like polyprotein
Length = 1363
Score = 554 bits (1427), Expect = e-157
Identities = 349/1132 (30%), Positives = 572/1132 (49%), Gaps = 64/1132 (5%)
Query: 131 RNYQNSTWRCHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPK----VNAT 186
R+ S C CG GH++ C P ++ + S GK V +
Sbjct: 239 RSKSKSKRGCWICGEDGHLKSTCPNK-NKPQFKNQGSNKGESSGGKGNLVEGSVNFVESA 297
Query: 187 ALIAHTSLRASS---KEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGI 243
+ +L ++ +++W D+GC HMT + +LE A V G+ + +++G+
Sbjct: 298 GMFVSEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGV 357
Query: 244 GKL---SDTG-SPNLDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMR 299
G + +D G + L +V + + NL+S+ G K + +K+ N+ VL+
Sbjct: 358 GTVRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENGMLRIKSGNQ-VLLE 416
Query: 300 GARSKDNCYMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKL 359
G R D Y+ + + + D+ +WH++L H++ K+M ++ + + K
Sbjct: 417 GRRY-DTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSLLIKKGF---LDKK 472
Query: 360 KIQEGKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMG-PMQVESLGGKRYVFVCV 418
K+ C +C G+ K+ QH T K LE +H DL G P SLG +Y +
Sbjct: 473 KVSMLDTCEDCIYGRAKKIGFNLAQH-DTKKKLEYVHSDLWGAPTVPMSLGNCQYFISFI 531
Query: 419 DDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSE 478
DD++R WV FLK K + FE F V+ + G + +R+D+G EF N F FC +
Sbjct: 532 DDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEK 591
Query: 479 GIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIR 538
G + + TPQQNGVVER NRT+ E R+ML LP FWAEA +TA + N+
Sbjct: 592 GFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCS 651
Query: 539 QGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYR 598
+ + W GK P Y +G ++ +D KL+ +++ G+ +GY + Y+
Sbjct: 652 AINFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDGG---KLNLRAKKGVLIGYPSGVKGYK 708
Query: 599 VYNIRTKVMMESINV------VVDDTSNERTGQAHDEDDLP--YECTNVEPD-------- 642
V+ I K + S NV V D + + +EDD Y ++E D
Sbjct: 709 VWLIEEKKCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGE 768
Query: 643 EPAIQFPNEQENTVSQPPLATKEPSIRVQKIHPKE---NIIGDLNDGVITRSR-----DL 694
+ Q V+ P + I +H +++ D I R D
Sbjct: 769 QSQAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRERREIRAPRRFDDEDY 828
Query: 695 VSNACFISK----VEPKNVKEALTDEFWIQ---SMQEELGQFKRNEVWELVPRPDDANVV 747
+ A + ++ VEP + KEA+ DE W + +M EE+ +N+ W V RP+ ++
Sbjct: 829 YAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRII 888
Query: 748 GTKWIFRNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLL 806
G++WI++ K G R K+RLVA+GY+Q EG+D++E FAPV + SIR+LL +
Sbjct: 889 GSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQE 948
Query: 807 KFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERL 866
L Q+DVK+AFL+G L E++Y+ P+G + V L K+LYGLKQAPR W E+
Sbjct: 949 NLELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKF 1008
Query: 867 TEFLINNGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFE 925
++ G+ + D + KK + M YVDD++ + Q ++ +++ +FE
Sbjct: 1009 NHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFE 1068
Query: 926 MSLVGELTYFLGLQV--KQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKL--- 980
M +G LG+++ + L+++Q Y ++K F + + TP H+K+
Sbjct: 1069 MKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSA 1128
Query: 981 TKDEKGTD---VDPSLYRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVKRI 1036
T+++ T+ ++ Y S +GS++Y + +RPD+ + VGV +R+ ++P H + VK +
Sbjct: 1129 TEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWV 1188
Query: 1037 IKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQN 1096
++YI GT D + Y N++ + GYCDAD+A D R+S +G F L N ISW S Q
Sbjct: 1189 LRYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQR 1248
Query: 1097 CVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHSRT 1156
V+ S+ E EY++ + + +W+K +LK++ +Q + +FCD+ SAI +SKN + H RT
Sbjct: 1249 VVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERT 1308
Query: 1157 KHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
KHID++ HFIRE++ DG V + +STEK ADIFTK L +F+ L +
Sbjct: 1309 KHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFLRV 1360
>At1g37110
Length = 1356
Score = 554 bits (1427), Expect = e-157
Identities = 354/1119 (31%), Positives = 580/1119 (51%), Gaps = 88/1119 (7%)
Query: 140 CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHTSLRASS- 198
C YC + GH++ C+ SR+ + +S G+ + V L+ +L +
Sbjct: 256 CWYCKKEGHVKKDCY-----------SRKKKMESEGQG--EAGVITEKLVFSEALSVNEQ 302
Query: 199 --KEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLS-DTGSPN-- 253
K+ W DSGC+ HMT + + + + + GD + +G G + DT
Sbjct: 303 MVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIK 362
Query: 254 -LDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNCYMWTS 312
L++V V L NLIS L G + + G V KN +RG+ S N
Sbjct: 363 ILENVKYVPHLRRNLISTGTLDKLGYRHEGGE-GKVRYFKNNKTALRGSLS--NGLYVLD 419
Query: 313 ETTFLSARCLMSKEDEVR--IWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGEC 370
+T +S C ++ D+V+ +WH +LGH+++ ++K + + I + +I E + C C
Sbjct: 420 GSTVMSELC-NAETDKVKTALWHSRLGHMSMNNLKVLAGKGL---IDRKEINELEFCEHC 475
Query: 371 QIGKQVKMSHQKLQHLTTSKVLELLHMDLMG-PMQVESLGGKRYVFVCVDDFSRFTWVEF 429
+GK K+S +H T+ L +H DL G P S+ GK+Y +DD +R W+ F
Sbjct: 476 VMGKSKKVSFNVGKH-TSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYF 534
Query: 430 LKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPIT 489
LK K +TF+ F E V+ + + +R+D+G EF N +F +C GI+ + T
Sbjct: 535 LKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYT 594
Query: 490 PQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELW 549
PQQNGV ER NRT+ E R +L+ + FWAEA TA Y+ NR + E+W
Sbjct: 595 PQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMW 654
Query: 550 KGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVMME 609
+KP K+ FGS Y+ D+ KL P++ G FLGY ++ Y+V+ + + +
Sbjct: 655 LNRKPGYKHLRKFGSIAYVHQDQG---KLKPRALKGFFLGYPAGTKGYKVWLLEEEKCVI 711
Query: 610 SINVVV-------------DDTSN-----------------ERTG-----QAHDEDDLPY 634
S NVV DDT N E +G Q + +
Sbjct: 712 SRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPIT 771
Query: 635 ECTNVEPDEPAIQFPNEQENTVSQPPLAT-KEPSIRVQK-IHPKENIIGDLNDGVITRSR 692
E E +++ + + T + L T K RV++ I+P + +T +
Sbjct: 772 EGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFT---EESSVTFAL 828
Query: 693 DLVSNACFISKVEPKNVKEALTD---EFWIQSMQEELGQFKRNEVWELVPRPDDANVVGT 749
+V N C + EP++ +EA+ E W + +E+ +N W+LV +P D ++G
Sbjct: 829 VVVEN-CIVQ--EPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGC 885
Query: 750 KWIFRNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKF 808
+W+F+ KS G TR K+RLVA+GY+Q EG+D+ E FAPV + SIR+L+ +
Sbjct: 886 RWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDL 945
Query: 809 RLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTE 868
L QMDVK+ FL+G L EE+Y+EQP+GFV S + V RLKK+LYGLKQ+PR W +R
Sbjct: 946 ELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDR 1005
Query: 869 FLINNGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMS 927
F+ + + + D ++VK + + + +YVDD++ G S + + EQ+ +EFEM
Sbjct: 1006 FMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMK 1065
Query: 928 LVGELTYFLGLQV--KQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLT---K 982
+G + LG+ + + L ++Q Y + ++ +F + A P H KL +
Sbjct: 1066 DMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVRE 1125
Query: 983 DEKGTDVDPSLYRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYIS 1041
+++ D D Y S +GS++Y + +RPD+ +A+ + +RY ++P + H VK +++Y+
Sbjct: 1126 EDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLK 1185
Query: 1042 GTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLS 1101
G D ++++ + +TGYCD+++A D R+S SG F + N +SW + Q V++S
Sbjct: 1186 GAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMS 1245
Query: 1102 TAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHSRTKHIDI 1161
T EAEYIA + + MW+K +L++ +QQD + ++CD+ SAI +SKN + H RTKHID+
Sbjct: 1246 TTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDV 1305
Query: 1162 RHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFE 1200
R ++IR++VE G V + + T + D TK + +F+
Sbjct: 1306 RFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFK 1344
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 553 bits (1426), Expect = e-157
Identities = 349/1122 (31%), Positives = 557/1122 (49%), Gaps = 69/1122 (6%)
Query: 140 CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPGKSRWKPKVNATALIAHTSLRASSK 199
C CG GH R C P + + S GK A +S +
Sbjct: 248 CWTCGEEGHFRSSCPN-QNKPQFKQSQVVKGESSGGKGNLAEAAGYYVSEALSSTEVHLE 306
Query: 200 EDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLSDTGSPNLDDVLL 259
++W D+GCS HMT + + + A V G+ ++RG+G + S L VL
Sbjct: 307 DEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLT 366
Query: 260 ----VEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDNCYMWTSETT 315
+ + NL+S+ G K F+ +++ K + ++ R D Y+ +
Sbjct: 367 NVRYIPDMDRNLLSLGTFEKAGYK--FESEDGILRIKAGNQVLLTGRRYDTLYLLNWKPV 424
Query: 316 FLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGECQIGKQ 375
+ ++ + D+ +WHQ+L H++ K+M+ +V + + K K+ VC +C GK
Sbjct: 425 ASESLAVVKRADDTVLWHQRLCHMSQKNMEILVRKGF---LDKKKVSSLDVCEDCIYGKA 481
Query: 376 VKMSHQKLQHLTTSKVLELLHMDLMG-PMQVESLGGKRYVFVCVDDFSRFTWVEFLKEKS 434
+ S L H T + LE +H DL G P SLG +Y +DDF+R WV F+K K
Sbjct: 482 KRKSFS-LAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKD 540
Query: 435 DTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPITPQQNG 494
+ FE F E V+ + + +R+D+G EF N F FC S GI + TPQQNG
Sbjct: 541 EAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNG 600
Query: 495 VVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELWKGKKP 554
V ER NRT+ E R+ML LP FWAEA +T + N+ + + W G P
Sbjct: 601 VAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPP 660
Query: 555 TVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTKVMMESINVV 614
Y +G ++ +D KL+P+++ G+ +GY + Y+V+ + + + S N++
Sbjct: 661 VYSYLRRYGCVAFVHTDDG---KLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNII 717
Query: 615 VD------DTSNERTGQAHDEDD-----LPYEC----------------TNVEPDEPAIQ 647
D + + +EDD L ++ T P+ P +
Sbjct: 718 FQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPESPVVS 777
Query: 648 FPNEQENTVSQPPLATKEP-SIRVQKIHPKENIIGDLNDGVITRSRDLVSNACFISK--- 703
P Q+ + + P S + + K I D + A + ++
Sbjct: 778 TPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFD----DEDYYAEALYTTEDGE 833
Query: 704 -VEPKNVKEALTD---EFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDE 759
VEP+N ++A D + W +M EE+ ++N W +V RP++ ++G +WIF+ K
Sbjct: 834 AVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGI 893
Query: 760 SG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSA 818
G R K+RLVA+GY+Q EGID++E FAPV + SIR+LL + L Q+DVK+A
Sbjct: 894 LGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTA 953
Query: 819 FLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKG 878
FL+G L E++Y+ P+G+ + V L KALYGLKQAP+ W E+ F+ + K
Sbjct: 954 FLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFVKS 1013
Query: 879 GIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLG 937
D + K G +M IYVDDI+ + + + + FEM +G LG
Sbjct: 1014 AYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILG 1073
Query: 938 LQV--KQMEDTLFITQSKYAKGIVKKFGLENAGHKRTP--------AATHIKLTKDEKGT 987
+++ + L+++Q Y I++ + + A TP AAT KL +DE
Sbjct: 1074 MEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRDEDFM 1133
Query: 988 DVDPSLYRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDY 1046
P Y S +GS++Y + +RPD+ + VG+ +R+ ++P H + VK +++YI GT
Sbjct: 1134 KSVP--YSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKT 1191
Query: 1047 GILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAE 1106
+ Y +++ + GYCDAD+A D R+S +G F L N ISW S Q V+ ST E+E
Sbjct: 1192 RLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESE 1251
Query: 1107 YIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFI 1166
Y++ + + +W+K +LK++ +Q + +FCD+ SAI +SKN + H RTKHID+++HFI
Sbjct: 1252 YMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFI 1311
Query: 1167 RELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLLGI 1208
RE++ DGTV + +STEK ADIFTK L ++F+ LL +
Sbjct: 1312 REIISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLLRV 1353
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 535 bits (1378), Expect = e-152
Identities = 333/1091 (30%), Positives = 561/1091 (50%), Gaps = 69/1091 (6%)
Query: 171 KKSPGKSRWKPKVNATALIAHTSLRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFV 230
+ S G S + A +S +++W D+GCS HMT + + E + A V
Sbjct: 256 ESSNGSSNYSEANGLYVSEALSSTDIHLEDEWVMDTGCSYHMTYKREWFEDLNEDAGGSV 315
Query: 231 TFGDGAKGKIRGIGKL---SDTGSP-NLDDVLLVEGLTANLISISQLCDQGLKVVFKQSG 286
G+ K+RGIG + ++ G L +V + + NL+S+ G FK
Sbjct: 316 RMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYS--FKLEN 373
Query: 287 CVVKNKNKDVLMRGARSKDNCYMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKR 346
+ D ++ R Y+ + ++ ++D+ +WH++LGH++ K+M
Sbjct: 374 GTLSIIAGDSVLLTVRRCYTLYLLQWRPVTEESLSVVKRQDDTILWHRRLGHMSQKNMDL 433
Query: 347 IVAEEAVRGIPKLKIQEGKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVE 406
++ + + K K+ + + C +C GK ++ QH T K LE +H DL G V
Sbjct: 434 LLKKGL---LDKKKVSKLETCEDCIYGKAKRIGFNLAQHDTREK-LEYVHSDLWGAPSVP 489
Query: 407 -SLGGKRYVFVCVDDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKE 465
SLG +Y +DD++R + FLK K + F+ F E V+ + I +R+D+G E
Sbjct: 490 FSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLE 549
Query: 466 FENGQFSEFCSSEGIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAI 525
F N F EFCS +GI + TPQQNGV ER NRTL E R+ML LP FWAEA
Sbjct: 550 FCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEAT 609
Query: 526 NTACYIHNRVTIRQGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVG 585
+T + N+ + + W GK P Y FG ++ +D KL+P+++ G
Sbjct: 610 HTTAILINKTPSSALNYEVPDKRWSGKSPIYSYLRRFGCIAFVHTDDG---KLNPRAKKG 666
Query: 586 IFLGYSGNSRAYRVYNIRTKVMMESINVVVDDTSN-----ERTGQAHDEDDLP------- 633
I +GY + Y+++ + K + S NV+ + ++ + DE++ P
Sbjct: 667 ILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENASYKDMMQSKDAEKDENEAPPSSYLDL 726
Query: 634 ----YECTNVEPDEPAIQFPNEQENTVSQPPLATKEPSIRVQKIHPKENIIGDLNDGVIT 689
E D+P + E ++ + P T+ S + ++ + +II +
Sbjct: 727 DLDHEEVITSGGDDPIV----EAQSPFNPSPATTQTYS---EGVNSETDIIQSPLSYQLV 779
Query: 690 RSRD--------------LVSNACFISK----VEPKNVKEALTDEFWIQ---SMQEELGQ 728
R RD ++ A + ++ +EP + EA W + +M EE+
Sbjct: 780 RDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMES 839
Query: 729 FKRNEVWELVPRPDDANVVGTKWIFRNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETF 787
+N W +V RP V+G++WI++ K G R K+RLVA+GY+Q +GID++E F
Sbjct: 840 QIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIF 899
Query: 788 APVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYR 847
APV + SIR+L+ + L Q+DVK+AFL+G L E++Y+ P+G+ + D V
Sbjct: 900 APVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCL 959
Query: 848 LKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFG 906
L K+LYGLKQAP+ W E+ ++ G+ + D ++K+ + G + +YVDD++
Sbjct: 960 LNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVA 1019
Query: 907 GMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQV--KQMEDTLFITQSKYAKGIVKKFGL 964
+ + + Q E++ F+M +G LG+++ + E+TL+++Q+ Y I++ + +
Sbjct: 1020 AKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNM 1079
Query: 965 ENAGHKRTPAATHIKLT-----KDEKGTDVDPSL-YRSMIGSLLY-LTASRPDITFAVGV 1017
+ H TP H+K+ K E+ D S+ Y S +GS++Y + +RPD+ + VG+
Sbjct: 1080 AESKHVVTPLGAHLKMRAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGI 1139
Query: 1018 CARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTS 1077
+RY ++P H + VK +++YI G+ + Y +++ + GYCDAD A D R+S +
Sbjct: 1140 ISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSIT 1199
Query: 1078 GGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLF 1137
G F L + ISW S +Q V+LST EAEY++ + + +WMK +LKE+ +Q + +F
Sbjct: 1200 GLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIF 1259
Query: 1138 CDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDAT 1197
CD+ SAI +SKN + H RTKHID+R+ +IR+++ +G + + TEK ADIFTK +
Sbjct: 1260 CDSQSAIALSKNNVHHERTKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVN 1319
Query: 1198 QFEKLRQLLGI 1208
+F+ LL +
Sbjct: 1320 KFQAALTLLQV 1330
>At4g17450 retrotransposon like protein
Length = 1433
Score = 512 bits (1318), Expect = e-145
Identities = 326/1046 (31%), Positives = 521/1046 (49%), Gaps = 78/1046 (7%)
Query: 196 ASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFGDGAKGKIRGIGKLSDTGSPNLD 255
A S W DSG + H+T + + +FV + KI GIG + + + +L
Sbjct: 426 AVSPRGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLH 485
Query: 256 DVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKN--------KNKDVLMRGARSKDNC 307
+VL + NLIS + K + G V N N V ++G S
Sbjct: 486 NVLYIPEFKFNLIS------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPE 539
Query: 308 YMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRI--VAEEAVRGIPKLKIQEGK 365
+ S S WH++LGH + + V V+ I K
Sbjct: 540 FSVCSSVVVDSVT-----------WHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCH 588
Query: 366 VCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFT 425
VC C + KQ +S Q Q++ S +L+H+D GP V + + T
Sbjct: 589 VCHVCHLSKQKHLSFQSRQNMC-SAAFDLVHIDTWGPFSVPT--------------NDAT 633
Query: 426 WVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFS 485
W+ LK KSD VF V + + + +RSD+ E + F++ ++ GI S
Sbjct: 634 WIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHELK---FTDLFAAHGIVAYHS 690
Query: 486 APITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQ 545
P TP+QN VVERK++ + ARA+L N+P FW + + TA ++ NR+ + +
Sbjct: 691 CPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSP 750
Query: 546 YELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAYRVYNIRTK 605
YE K P + FG CY + + R K +P++ +FLGY + Y++ +I T
Sbjct: 751 YEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETH 810
Query: 606 VMMESINVVV-DDTSNERTGQAHDE--------------DDLPYECTNVEPDEPAIQFPN 650
+ S +V+ +D + D+ DDLP E T++ P Q +
Sbjct: 811 AVSISRHVIFHEDIFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPH-QDVS 869
Query: 651 EQENTVSQPPLAT--KEPSIRVQKIHPKENIIGDLNDGVITRSRDLVSNACFISKVEPKN 708
+ V PL+ K+P +Q H N + + + ++NA V P+
Sbjct: 870 SSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPFHAFI-----NNITNA-----VIPQR 919
Query: 709 VKEALTDEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKS 768
EA + W +M+EE+G R W +V P + +G KW+F K + G++ R K+
Sbjct: 920 YSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKA 979
Query: 769 RLVAQGYSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEV 828
RLVA+GY+Q EG+D+ ETF+PVA+L S+R++L +A +K+ ++Q+D+ +AFLNG L+EE+
Sbjct: 980 RLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEI 1039
Query: 829 YVEQPKGFVD---PSFPDH-VYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTL 884
Y++ P G+ D + P H + RL K++YGLKQA R WY +L+ L G+ K D TL
Sbjct: 1040 YMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTL 1099
Query: 885 FVKKNGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQVKQME 944
F+K G LM +YVDDI+ S+ V QF ++KS F++ +G YFLG+++ + E
Sbjct: 1100 FIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSE 1159
Query: 945 DTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLYL 1004
+ I Q KY ++ G + P +KL K++ D + YR ++G L+YL
Sbjct: 1160 KGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYL 1219
Query: 1005 TASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDA 1064
+RPDI +AV ++ P + HL V ++++Y+ GT G+ YS + L GY D+
Sbjct: 1220 QITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDS 1279
Query: 1065 DWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQML 1124
D+ D R+ + C F+ + L+SW SKKQ+ VS+STAEAE+ A +++W+ ++
Sbjct: 1280 DFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLF 1339
Query: 1125 KEYNVQ-QDVMTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVSTE 1183
++ V L+CDN +A++I N + H RTK +++ + RE VE G + V T
Sbjct: 1340 DDFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETG 1399
Query: 1184 KQLADIFTKALDATQFEKLRQLLGIC 1209
+Q+AD TKA+ QF KL +G+C
Sbjct: 1400 EQVADPLTKAIHPAQFHKLIGKMGVC 1425
Score = 33.5 bits (75), Expect = 0.76
Identities = 10/22 (45%), Positives = 15/22 (67%)
Query: 139 RCHYCGRFGHIRPYCFKLYGYP 160
+C YC + GH+ C+K +GYP
Sbjct: 298 KCSYCNKLGHLVDKCYKKHGYP 319
>At4g21360 putative transposable element
Length = 1308
Score = 509 bits (1311), Expect = e-144
Identities = 355/1132 (31%), Positives = 556/1132 (48%), Gaps = 103/1132 (9%)
Query: 118 RPQQSVTHSYAQVRNYQNSTWR--CHYCGRFGHIRPYCFKLYGYPILQDVSREYEKKSPG 175
RPQ T + R NS R C +C + GH++ C+ R+ E + G
Sbjct: 233 RPQTKNTQGQGKGRGRSNSKSRLTCWFCKKEGHVKKDCYA---------GKRKLENEGQG 283
Query: 176 KSR--WKPKVNATALIAHTSLRASSKEDWYFDSGCSRHMTGVKSYLEKMKPHAKSFVTFG 233
K+ + V + AL + +K+ W DSGC+ HMT + + + + + G
Sbjct: 284 KAGVITEKLVYSEALSMYDQ---EAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLG 340
Query: 234 DGAKGKIRGIG--KLSDTGSPN--LDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVV 289
D + +G G K++ G L +V V L NLIS L G K
Sbjct: 341 DDHTVESKGSGTVKVNTHGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRF 400
Query: 290 KNKNKDVLMRGARSKDNCYMWTSETTFLSARCLMSKEDEVRIWHQKLGHLNLKSMKRIVA 349
+NK L + Y+ T + ++ +WH +LGH++L +MK I+A
Sbjct: 401 YKENKTALC--GNLVNGLYVLDGHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMK-ILA 457
Query: 350 EEAVRGIPKLKIQEGKVCGECQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLG 409
E+ + + K I+E C C +GK K+S +H+T +VL +H DL G
Sbjct: 458 EKGL--LEKKDIKELSFCENCVMGKSKKLSFNVGKHIT-DEVLGYIHADLWG-------- 506
Query: 410 GKRYVFVCVDDFSRFTWVEFLKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENG 469
K+Y +DD SR W+ FLK K +TFE F E V+ + + +R+D+G EF N
Sbjct: 507 -KQYFLSIIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNL 565
Query: 470 QFSEFCSSEGIKHEFSAPITPQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTAC 529
+F EFC GI+ + TPQQNGV +R NRTL E R +L+ L FWAEA TA
Sbjct: 566 KFDEFCKQNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAA 625
Query: 530 YIHNRVTIRQGDTVTQYELWKGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLG 589
Y+ NR D ELW KKP K+ FG Y+ D + KL P++ G+FLG
Sbjct: 626 YLVNRSPASAVDHNVPEELWLDKKPGYKHLRRFGCIAYVHLD---QGKLKPRALKGVFLG 682
Query: 590 YSGNSRAYRVYNIRTKVMMESINVVVD------DTSNERTGQAHDEDDLP-YECTNVEPD 642
Y ++ Y+V+ + + + S N+V + D D DL Y V
Sbjct: 683 YPQGTKGYKVWLLDEEKCVISRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVK 742
Query: 643 E------------PAIQFPNEQENTVSQPPLATKEPSIRVQKIHPKE----NIIGDLNDG 686
E I ++ EN+V+Q PL Q +E N L D
Sbjct: 743 EHGECSKTGGVTIEEIDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLAD- 801
Query: 687 VITRSRDLVSNACFISKVEPKNVKEALTDEFWIQ---SMQEELGQFKRNEVWELVPRPDD 743
T + A I EP+ +A D+ WI+ M+EE+ +N W++V P +
Sbjct: 802 -YTHFALALVMAEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKE 860
Query: 744 ANVVGTKWIFRNKSDESG-NVTRNKSRLVAQGYSQIEGIDFYETFAPVARLESIRLLLGV 802
V+ +W+F+ K G R K+RLVA+G++Q +GID+ E FAPV + SIR+L+
Sbjct: 861 QKVISCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSA 920
Query: 803 ACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPKGFVDPSFPDHVYRLKKALYGLKQAPRAW 862
L QMDVK+ FL+G L++ +Y+EQP+GF D V LKK+LYGLKQAPR W
Sbjct: 921 VVKDDMELEQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQW 980
Query: 863 YERLTEFLINNGYDKGGIDKTLFVKK-NGGELMVAQIYVDDIVFGGMSNQMVEQFVEQMK 921
++ F+++ + + D ++VK+ N GE + +YVDD++ S + + E +
Sbjct: 981 NKKFHAFMLSLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALS 1040
Query: 922 SEFEMSLVGELTYFLGLQV--KQMEDTLFITQSKYAKGIVKKFGLENAGHKRTPAATHIK 979
+FEM +G + LG+ + + E TL ++Q++Y ++++F + +A TP H K
Sbjct: 1041 LKFEMKDMGAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFK 1100
Query: 980 LTK--DEKGTDVDPSL--YRSMIGSLLY-LTASRPDITFAVGVCARYQAEPKTSHLIQVK 1034
LT DE G+ VDP + Y S +GS++Y + + PD+ +A+G+ +R+ + P
Sbjct: 1101 LTSLIDEIGS-VDPEVVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP--------- 1150
Query: 1035 RIIKYISGTSDYGILYSHNTNSGLTGYCDADWAGSADDRKSTSGGCFFLENNLISWFSKK 1094
N + GYCD+D A D R+S SG F + N +SW S
Sbjct: 1151 ------------------GANLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSL 1192
Query: 1095 QNCVSLSTAEAEYIAAGSSCTQLMWMKQMLKEYNVQQDVMTLFCDNLSAINISKNPIQHS 1154
Q+ V+LS+ +AE+IA + + +W++ +L++ +Q T++CD+ SAI +SKN H
Sbjct: 1193 QHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHD 1252
Query: 1155 RTKHIDIRHHFIRELVEDGTVTLEHVSTEKQLADIFTKALDATQFEKLRQLL 1206
RTKH++++ +FIR+++E G V + + T AD+ TK + +FE+ +L
Sbjct: 1253 RTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFEEALDVL 1304
>At4g03810 putative retrotransposon protein
Length = 964
Score = 484 bits (1247), Expect = e-136
Identities = 315/987 (31%), Positives = 506/987 (50%), Gaps = 64/987 (6%)
Query: 254 LDDVLLVEGLTANLISISQLCDQGLKVVFKQSGCVVKNKNKDVLMRGARSKDN-CYMWTS 312
L + V + N+IS+S L +G K C + ++D + G+ DN ++
Sbjct: 5 LKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCC---SFDRDDMFYGSAPLDNGLHVLNQ 61
Query: 313 ETTFLSARCLMSKEDEVR---IWHQKLGHLNLKSMKRIVAEEAVRGIPKLKIQEGKVCGE 369
+ R K +++ +WH +LGH+N K ++++ ++ + + + C
Sbjct: 62 SMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFD---YESYETCES 118
Query: 370 CQIGKQVKMSHQKLQHLTTSKVLELLHMDLMGPMQVESLGGKRYVFVCVDDFSRFTWVEF 429
C +GK K S +L L+H D+ GPM + G +Y DDFSR+ +V
Sbjct: 119 CLLGKMTKAPFTGHSE-RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYL 177
Query: 430 LKEKSDTFEVFKELCLQVQREKGSGIVKIRSDHGKEFENGQFSEFCSSEGIKHEFSAPIT 489
+K KS +FE FKE +VQ + G I +RSD G E+ + FS+ GI + + P T
Sbjct: 178 MKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGT 237
Query: 490 PQQNGVVERKNRTLQESARAMLHAKNLPYHFWAEAINTACYIHNRVTIRQGDTVTQYELW 549
PQ NGV ER+NRTL + R+M+ +LP FW A+ T+ ++ NR + + T YE+W
Sbjct: 238 PQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEK-TPYEIW 296
Query: 550 KGKKPTVKYFHVFGSKCYILSDREHRRKLDPKSEVGIFLGYSGNSRAY--------RVYN 601
GK P + + ++G + Y + R KL PKS+ F+GY ++ Y +V+
Sbjct: 297 TGKVPNLSFLKIWGCESY--AKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFV 354
Query: 602 IRTKVMMESINVVVDDTSNERTGQAHDEDDLPYECTNVEPDEPAIQFPNEQE-NTVSQPP 660
+R +E + TS + L E + D P Q ++ + V +P
Sbjct: 355 VRNGAFLER-EFLSKGTSGSKV--------LLEEVREPQGDVPTSQEEHQLDLRRVVEPI 405
Query: 661 LATKEPSIRVQKIHPKENIIGDLNDGVITRSRDLV--SNACF-ISKVEPKNVKEALT--- 714
L EP +R + E R RD V +A F I EP + +EAL
Sbjct: 406 LV--EPEVRRSERSRHEP----------DRFRDWVMDDHALFMIESDEPTSYEEALMGPD 453
Query: 715 DEFWIQSMQEELGQFKRNEVWELVPRPDDANVVGTKWIFRNKSDESGNVTRNKSRLVAQG 774
+ W+++ + E+ +N+VW LV PD + KWIF+ K D GN+ K+ LVA+G
Sbjct: 454 SDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKG 513
Query: 775 YSQIEGIDFYETFAPVARLESIRLLLGVACLLKFRLYQMDVKSAFLNGYLNEEVYVEQPK 834
Y Q+ GID+ ET++PVA L+SIR+LL A + ++QMDVK+AFLNG L E VY+ QP+
Sbjct: 514 YKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPE 573
Query: 835 GFVDPSFPDHVYRLKKALYGLKQAPRAWYERLTEFLINNGYDKGGIDKTLFVKKNGGELM 894
GF P V +L +++YGLKQA R+W R E + + + + ++ K +G +
Sbjct: 574 GFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVA 633
Query: 895 VAQIYVDDIVFGGMSNQMVEQFVEQMKSEFEMSLVGELTYFLGLQV--KQMEDTLFITQS 952
+YVDDI+ G +++ + S F M +GE Y LG+++ ++ + ++Q
Sbjct: 634 FLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQD 693
Query: 953 KYAKGIVKKFGLENA-------GHKRTPAATHIKLTKDEKGTDVDPSLYRSMIGSLLY-L 1004
Y ++ +F + ++ H T + T T DE+ + Y S IGS++Y +
Sbjct: 694 TYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDER-ERMSKIPYASAIGSIMYAM 752
Query: 1005 TASRPDITFAVGVCARYQAEPKTSHLIQVKRIIKYISGTSDYGILYSHNTNSGLTGYCDA 1064
+RPD+ A+ + +RYQ++P SH I V+ I KY+ T D ++Y + ++GY DA
Sbjct: 753 LYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDA 812
Query: 1065 DWAGSADDRKSTSGGCFFLENNLISWFSKKQNCVSLSTAEAEYIAAGSSCTQLMWMKQML 1124
+ DD +S SG F L +SW S KQ+ V+ ST EAEYIAA + +++W+++ +
Sbjct: 813 SFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFI 872
Query: 1125 KEYNVQQDV---MTLFCDNLSAINISKNPIQHSRTKHIDIRHHFIRELVEDGTVTLEHVS 1181
E V + + L+CDN AI +K P H ++KHI R+H IRE+++ G V + VS
Sbjct: 873 TELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVS 932
Query: 1182 TEKQLADIFTKALDATQFEKLRQLLGI 1208
T+ +AD FTK L + E +GI
Sbjct: 933 TDANVADHFTKPLPQPKHESHTTAIGI 959
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,378,563
Number of Sequences: 26719
Number of extensions: 1204127
Number of successful extensions: 4049
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 322
length of query: 1213
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1102
effective length of database: 8,352,787
effective search space: 9204771274
effective search space used: 9204771274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0172.5