BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0166.12
(1518 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 330 5e-90
At1g48710 hypothetical protein 329 7e-90
At3g59720 copia-type reverse transcriptase-like protein 328 1e-89
At1g58140 hypothetical protein 313 6e-85
At1g32590 hypothetical protein, 5' partial 300 4e-81
At4g04420 putative transposon protein 284 3e-76
At3g60170 putative protein 281 3e-75
At3g25450 hypothetical protein 272 9e-73
At2g15650 putative retroelement pol polyprotein 267 3e-71
At2g05960 putative retroelement pol polyprotein 261 2e-69
At2g05390 putative retroelement pol polyprotein 248 2e-65
At2g17490 putative retroelement pol polyprotein 244 3e-64
At2g13930 putative retroelement pol polyprotein 242 1e-63
At2g10610 pseudogene 231 3e-60
At1g37110 214 2e-55
At3g45520 copia-like polyprotein 207 3e-53
At2g07550 putative retroelement pol polyprotein 206 6e-53
At4g21360 putative transposable element 203 5e-52
At2g20460 putative retroelement pol polyprotein 202 9e-52
At4g27210 putative protein 202 2e-51
>At3g61330 copia-type polyprotein
Length = 1352
Score = 330 bits (845), Expect = 5e-90
Identities = 199/629 (31%), Positives = 324/629 (50%), Gaps = 38/629 (6%)
Query: 474 YPPTQIMRSTTWKCHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVT 533
+P ++ +S+ KC++CGK GH C P + + + KI+E +
Sbjct: 269 HPKSRYDKSSV-KCYNCGKFGHYASECK----APSNKKFEEKAHYVEEKIQE----EDML 319
Query: 534 ALVAYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI 593
+ +Y WY DSG S HM K + V GD +K +KG I
Sbjct: 320 LMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNI 379
Query: 594 V----SGGSPNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVR 649
+ +G +SNV + + N++S+ QL + ++ ++ ++ ++
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 650 SKDNCYMWSPQNKAMSSMCL-VSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKI 708
SK+ ++ + +N + CL + ++E+ LWH + GHLN ++ + KE +RG+P +
Sbjct: 440 SKNRMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN- 496
Query: 709 EEDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDF 768
++VC C +GKQ K S K + + L+L+H D+ GP+ +S G Y + +DDF
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
Query: 769 SRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIK 828
SR TWV FL EKSE FE+F++ ++ E G I +RSD G EF + +F +YC + GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 829 HEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGT 888
+ + P +PQQNGVVERKNRT+ E AR ML +K++P LWAEA+ A Y+ R +S +
Sbjct: 617 RQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 889 DSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFN 948
T E W G+KP V + VF S + E+R KLD KS++ +F+GY NSK Y+++N
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 949 SRTKTMMESINVVVD-----DMVSSLNEINV---DGDDNVPQIVDERPNDCDIRSDTEPE 1000
TK + S N+V D D S+ + N +D +E P++ T P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPT 796
Query: 1001 EEKEQESSKEIVPSIR-IQKMHLKENIIGNLNEGVVTRSRDIIANACFISKIEPKNIKEA 1059
+ +ESS E P R IQ+++ VT +++ + C ++ EP + ++A
Sbjct: 797 SSQIEESSSERTPRFRSIQELY------------EVTENQENLTLFCLFAECEPMDFQKA 844
Query: 1060 LTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
+ + W NAM EE+ ++N+ W+L P
Sbjct: 845 IEKKTWRNAMDEEIKSIQKNDTWELTSLP 873
Score = 258 bits (658), Expect = 2e-68
Identities = 122/294 (41%), Positives = 195/294 (65%), Gaps = 1/294 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ L++K ++IA +YVDD++F G + + E F + M EFEM+ +G ++Y+ G++V
Sbjct: 1013 EHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1072
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
KQ + IFI+Q YAK ++KKF ++ S TP IKL+K E G VD + ++S++ S
Sbjct: 1073 KQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGS 1132
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L YLT +RPDI +++ V +RY P +H KRI++YI GT ++G Y+ S+ L+
Sbjct: 1133 LRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVG 1192
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
Y D+DW G+ DD KSTSG F++G+ +W +KKQ V+LST EAEY+AA S +W+
Sbjct: 1193 YSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWL 1252
Query: 1466 KHMLREYNVKQDVMT-LYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEEK 1518
+++L+E ++ Q+ T ++ +N SAI ++KNP+ H R+KHID R+H+I++ V +K
Sbjct: 1253 RNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1306
Score = 54.3 bits (129), Expect = 5e-07
Identities = 39/145 (26%), Positives = 69/145 (46%), Gaps = 10/145 (6%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+K+LRSL KF+ VT IEE +D+ ++ +++L+GSLQ +E ++ D + +
Sbjct: 159 EKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITK 218
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRK-KE 263
E++ S + G + R E D + G++S R K
Sbjct: 219 EENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHE--------DNTNQRGENSSRGRGKGHP 270
Query: 264 EDKYNKSKGVQCHECEGYEHIKAEC 288
+ +Y+KS V+C+ C + H +EC
Sbjct: 271 KSRYDKS-SVKCYNCGKFGHYASEC 294
>At1g48710 hypothetical protein
Length = 1352
Score = 329 bits (844), Expect = 7e-90
Identities = 199/629 (31%), Positives = 323/629 (50%), Gaps = 38/629 (6%)
Query: 474 YPPTQIMRSTTWKCHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVT 533
+P ++ +S+ KC++CGK GH C P + + + KI+E +
Sbjct: 269 HPKSRYDKSSV-KCYNCGKFGHYASECK----APSNKKFEEKANYVEEKIQE----EDML 319
Query: 534 ALVAYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI 593
+ +Y WY DSG S HM K + V GD +K +KG I
Sbjct: 320 LMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNI 379
Query: 594 V----SGGSPNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVR 649
+ +G +SNV + + N++S+ QL + ++ ++ ++ ++
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 650 SKDNCYMWSPQNKAMSSMCL-VSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKI 708
SK+ ++ + +N + CL + ++E+ LWH + GHLN ++ + KE +RG+P +
Sbjct: 440 SKNRMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN- 496
Query: 709 EEDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDF 768
++VC C +GKQ K S K + +SL+L+H D+ GP+ +S G Y + +DDF
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
Query: 769 SRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIK 828
SR TWV FL EKSE FE+F++ ++ E G I +RSD G EF + +F +YC + GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 829 HEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGT 888
+ + P +PQQNGV ERKNRT+ E AR ML +K++P LWAEA+ A Y+ R +S +
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 889 DSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFN 948
T E W G+K V + VF S + E+R KLD KS++ +F+GY NSK Y+++N
Sbjct: 677 GKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 949 SRTKTMMESINVVVD-----DMVSSLNEINV---DGDDNVPQIVDERPNDCDIRSDTEPE 1000
TK + S N+V D D S+ + N +D +E P++ T P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPT 796
Query: 1001 EEKEQESSKEIVPSIR-IQKMHLKENIIGNLNEGVVTRSRDIIANACFISKIEPKNIKEA 1059
+ +ESS E P R IQ+++ VT +++ + C ++ EP + +EA
Sbjct: 797 SSQIEESSSERTPRFRSIQELY------------EVTENQENLTLFCLFAECEPMDFQEA 844
Query: 1060 LTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
+ + W NAM EE+ ++N+ W+L P
Sbjct: 845 IEKKTWRNAMDEEIKSIQKNDTWELTSLP 873
Score = 258 bits (659), Expect = 2e-68
Identities = 123/294 (41%), Positives = 194/294 (65%), Gaps = 1/294 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ L++K ++IA +YVDD++F G + M E F + M EFEM+ +G ++Y+ G++V
Sbjct: 1013 EHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1072
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
KQ + IFI+Q YAK ++KKF ++ S TP IKL+K E G VD + ++S++ S
Sbjct: 1073 KQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGS 1132
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L YLT +RPDI +++ V +RY P +H KRI++YI GT ++G Y+ S+ L+
Sbjct: 1133 LRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVG 1192
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
Y D+DW G+ DD KSTSG F++G+ +W +KKQ V LST EAEY+AA S +W+
Sbjct: 1193 YSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWL 1252
Query: 1466 KHMLREYNVKQDVMT-LYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEEK 1518
+++L+E ++ Q+ T ++ +N SAI ++KNP+ H R+KHID R+H+I++ V +K
Sbjct: 1253 RNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1306
Score = 55.8 bits (133), Expect = 2e-07
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+K+LRSL KF+ VT IEE +D+ ++ +++L+GSLQ +E E+ KK I V N
Sbjct: 159 EKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE----EKKKKKEDIIEQVLNM 214
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRK-KE 263
+ S + + GR RP + ++R G++S R K
Sbjct: 215 QITKEENGQSYQRRGGG-QVRGRGRGGYGNGRGWRPHEDNTNQR---GENSSRGRGKGHP 270
Query: 264 EDKYNKSKGVQCHECEGYEHIKAEC 288
+ +Y+KS V+C+ C + H +EC
Sbjct: 271 KSRYDKS-SVKCYNCGKFGHYASEC 294
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 328 bits (841), Expect = 1e-89
Identities = 198/629 (31%), Positives = 322/629 (50%), Gaps = 38/629 (6%)
Query: 474 YPPTQIMRSTTWKCHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVT 533
+P ++ +S+ KC++CGK GH C P + + + KI+E +
Sbjct: 269 HPKSRYDKSSV-KCYNCGKFGHYASECK----APSNKKFKEKANYVEEKIQE----EDML 319
Query: 534 ALVAYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI 593
+ +Y WY DSG S HM K + V GD +K +KG I
Sbjct: 320 LMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNI 379
Query: 594 V----SGGSPNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVR 649
+ +G +SNV + + N++S+ QL + ++ ++ ++ ++
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPM 439
Query: 650 SKDNCYMWSPQNKAMSSMCL-VSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKI 708
SK+ ++ + +N + CL + ++E+ LWH + GHLN ++ + KE +RG+P +
Sbjct: 440 SKNRMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN- 496
Query: 709 EEDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDF 768
++VC C +G Q K S K + + L+L+H D+ GP+ +S G Y + +DDF
Sbjct: 497 HPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
Query: 769 SRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIK 828
SR TWV FL EKSE FE+F++ ++ E G I +RSD G EF + +F +YC + GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIR 616
Query: 829 HEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGT 888
+ + P +PQQNGV ERKNRT+ E AR ML +K++P LWAEA+ A Y+ R +S +
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 889 DSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFN 948
T E W G+KP V + VF S + E+R KLD KS++ +F+GY NSK Y+++N
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 949 SRTKTMMESINVVVD-----DMVSSLNEINV---DGDDNVPQIVDERPNDCDIRSDTEPE 1000
TK + S N+V D D S+ + N +D +E P++ T P
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPT 796
Query: 1001 EEKEQESSKEIVPSIR-IQKMHLKENIIGNLNEGVVTRSRDIIANACFISKIEPKNIKEA 1059
+ +ESS E P R IQ+++ VT +++ + C ++ EP + +EA
Sbjct: 797 SSQIEESSSERTPRFRSIQELY------------EVTENQENLTLFCLFAECEPMDFQEA 844
Query: 1060 LTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
+ + W NAM EE+ ++N+ W+L P
Sbjct: 845 IEKKTWRNAMDEEIKSIQKNDTWELTSLP 873
Score = 141 bits (355), Expect = 3e-33
Identities = 87/294 (29%), Positives = 142/294 (47%), Gaps = 81/294 (27%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ L++K ++IA +YVDD++F G + M E F + M EFEM+ +G ++Y+ G++V
Sbjct: 1013 EHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1072
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
KQ + IFI+Q YAK ++KKF ++ S S++ S
Sbjct: 1073 KQEDNGIFITQEGYAKEVLKKFKMDDSN--------------------------PSLVGS 1106
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L YLT +RPDI +++ V +RY P +H KRI++YI GT ++G Y+ S+ L+
Sbjct: 1107 LRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV- 1165
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
C A W N
Sbjct: 1166 VCHAIWLRN--------------------------------------------------- 1174
Query: 1466 KHMLREYNVKQDVMT-LYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEEK 1518
+L+E ++ Q+ T ++ +N SAI ++KNP+ H R+KHID R+H+I++ V +K
Sbjct: 1175 --LLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1226
Score = 57.0 bits (136), Expect = 8e-08
Identities = 47/169 (27%), Positives = 83/169 (48%), Gaps = 11/169 (6%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+K+LRSL KF+ VT IEE +D+ ++ +++L+GSLQ +E +KK K V
Sbjct: 159 EKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE-------EKKKKKEDIVEQV 211
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRK-KE 263
+ +++++ ++ R + R RP+ D + G++S R K
Sbjct: 212 LNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPH-EDNTNQRGENSSRGRGKGHP 270
Query: 264 EDKYNKSKGVQCHECEGYEHIKAECATYLKKLGKGMVATWSDDDTGEED 312
+ +Y+KS V+C+ C + H +EC K K A + ++ EED
Sbjct: 271 KSRYDKS-SVKCYNCGKFGHYASECKAPSNKKFKEK-ANYVEEKIQEED 317
>At1g58140 hypothetical protein
Length = 1320
Score = 313 bits (801), Expect = 6e-85
Identities = 191/620 (30%), Positives = 307/620 (48%), Gaps = 52/620 (8%)
Query: 474 YPPTQIMRSTTWKCHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVT 533
+P ++ +S+ KC++CGK GH C P + + + KI+E +
Sbjct: 269 HPKSRYDKSSV-KCYNCGKFGHYASECK----APSNKKFEEKANYVEEKIQE----EDML 319
Query: 534 ALVAYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI 593
+ +Y WY DSG S HM K + V GD +K +KG I
Sbjct: 320 LMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNI 379
Query: 594 V----SGGSPNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVR 649
+ +G +SNV + + N++S+ QL + ++ ++ ++ ++
Sbjct: 380 LIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPM 439
Query: 650 SKDNCYMWSPQNKAMSSMCL-VSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKI 708
SK+ ++ + +N + CL + ++E+ LWH + GHLN ++ + KE +RG+P +
Sbjct: 440 SKNRMFVLNIRNDI--AQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN- 496
Query: 709 EEDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDF 768
++VC C +GKQ K S K + + L+L+H D+ GP+ +S G Y + +DDF
Sbjct: 497 HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDF 556
Query: 769 SRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIK 828
SR TWV FL EKSE FE+F++ ++ E G I +RSD G EF + +F +YC + GI+
Sbjct: 557 SRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIR 616
Query: 829 HEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGT 888
+ + P +PQQNGV ERKNRT+ E AR ML +K++P LWAEA+ A Y+ R +S +
Sbjct: 617 RQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVS 676
Query: 889 DSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFN 948
T E W G+KP V + VF S + E+R KLD KS++ +F+GY NSK Y+++N
Sbjct: 677 GKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYN 736
Query: 949 SRTKTMMESINVVVDDMVSSLNEINVDGDDNVPQIVDERPNDCDIRSDTEPEEEKEQESS 1008
TK + S N+V D+ N + + P +++P EP E E S
Sbjct: 737 PDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKP---------EPTRE-EPPSE 786
Query: 1009 KEIVPSIRIQKMHLKENIIGNLNEGVVTRSRDIIANACFISKIEPKNIKEALTDEYWINA 1068
+ P ++E K EP + +EA+ + W NA
Sbjct: 787 EPTTPPTSPTSSQIEE-------------------------KCEPMDFQEAIEKKTWRNA 821
Query: 1069 MQEELSQFKRNEVWDLVPRP 1088
M EE+ ++N+ W+L P
Sbjct: 822 MDEEIKSIQKNDTWELTSLP 841
Score = 259 bits (662), Expect = 8e-69
Identities = 123/294 (41%), Positives = 195/294 (65%), Gaps = 1/294 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ L++K ++IA +YVDD++F G + M E F + M EFEM+ +G ++Y+ G++V
Sbjct: 981 EHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1040
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
KQ + IFI+Q YAK ++KKF ++ S TP IKL+K E G VD + ++S++ S
Sbjct: 1041 KQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGS 1100
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L YLT +RPDI +++ V +RY P +H KRI++YI GT ++G Y+ S+ L+
Sbjct: 1101 LRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVG 1160
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
Y D+DW G+ DD KSTSG F++G+ +W +KKQ V+LST EAEY+AA S +W+
Sbjct: 1161 YSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWL 1220
Query: 1466 KHMLREYNVKQDVMT-LYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEEK 1518
+++L+E ++ Q+ T ++ +N SAI ++KNP+ H R+KHID R+H+I++ V +K
Sbjct: 1221 RNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKK 1274
Score = 55.5 bits (132), Expect = 2e-07
Identities = 41/145 (28%), Positives = 74/145 (50%), Gaps = 10/145 (6%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+K+LRSL KF+ VT IEE +D+ ++ +++L+GSLQ +E +KK K V
Sbjct: 159 EKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYE-------EKKKKKEDIVEQV 211
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRK-KE 263
+ +++++ ++ R + R RP+ D + G++S R K
Sbjct: 212 LNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPH-EDNTNQRGENSSRGRGKGHP 270
Query: 264 EDKYNKSKGVQCHECEGYEHIKAEC 288
+ +Y+KS V+C+ C + H +EC
Sbjct: 271 KSRYDKS-SVKCYNCGKFGHYASEC 294
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 300 bits (768), Expect = 4e-81
Identities = 199/634 (31%), Positives = 310/634 (48%), Gaps = 47/634 (7%)
Query: 484 TWKCHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTS-LR 542
T +C C K GH + C W + + L+A+ +
Sbjct: 209 TVECFKCHKMGHYKAEC-------PSWEKEANYVEMEEDL----------LLMAHVEQIG 251
Query: 543 ASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI---VSGGSP 599
K+ W+ DSGCS HM + + + V GD + ++G K+ V G
Sbjct: 252 DEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQ 311
Query: 600 NLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEE-VVMTGVRSKDNCYMW- 657
+S+V V GL NL S+ QL L C V ++ E+ +VM +K+ ++
Sbjct: 312 VISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVF 371
Query: 658 ---SPQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKI-EEDKV 713
+ + CL + +WH++ GHLN ++ + KE ++G+P+ + EE+ V
Sbjct: 372 AAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAV 431
Query: 714 CGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTW 773
C C GKQ + S K + +T+ LQL+H D+ GP++ S GKRY+ +DDFSR W
Sbjct: 432 CDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCW 491
Query: 774 VNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSA 833
L+EKSETF+ F+E +++ E G +V +RSD G E+ + +F EYC GIK + +A
Sbjct: 492 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 551
Query: 834 PITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLY 893
TPQQNGV ERKNR++ R ML VP W EA+ A YI R ++ D T
Sbjct: 552 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 611
Query: 894 ELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKT 953
E W KP+V++ +F S Y L ++R KLD KS + + G S SKAYR+++ T
Sbjct: 612 EKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGK 671
Query: 954 MMESINVVVDDM-------VSSLNEINVDGDDNVPQIVDERP----NDCDIRSDTEPEEE 1002
++ S +V D+ S E+ D D+ P +E P N + +TE EEE
Sbjct: 672 ILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEP-AGEEGPEINHNGQQDQEETEEEEE 730
Query: 1003 KEQESSKEIVPSI-------RIQKMHLKENIIGNLNEGVVTRSRDIIANACFISKIEPKN 1055
E+ + +P++ R Q + +K+ ++GN ++T+ + A FI +P
Sbjct: 731 TVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARV-LITQDEEDEVLALFIGPDDPVC 789
Query: 1056 IKEALTDEYWINAMQEELSQFKRNEVWDLVPRPE 1089
+EA E W AM+ E++ + N W+LV PE
Sbjct: 790 FEEAAQLEVWRKAMEAEITSIEENNTWELVELPE 823
Score = 222 bits (565), Expect = 1e-57
Identities = 115/304 (37%), Positives = 174/304 (56%), Gaps = 38/304 (12%)
Query: 1220 YNKRGIDK-----TLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLV 1274
+ K G +K TLFVK + ++ +YVDD+++ G S M+E F M EF M+ +
Sbjct: 951 FGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDL 1010
Query: 1275 GELNYFPGLQVKQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDV 1334
G++ YF G++V Q + IFI+Q KYA ++KK+G+EG + P KLTK
Sbjct: 1011 GKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK------- 1063
Query: 1335 DQSLYRSMICSLLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTF 1394
+RY +P E HL+ VKRI++Y+ GT D G
Sbjct: 1064 -------------------------AGAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQ 1098
Query: 1395 YAHNSNSNLISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIA 1454
Y + L+ + D+D+AG+ DD KSTSG F LG I+W +KKQ V+LSTTEAE+++
Sbjct: 1099 YERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVS 1158
Query: 1455 AGSWCTQLLWMKHMLREYNVKQDVMTL-YCENLSAINISKNPIQHSRTKHIDIRHHFIKD 1513
A Q +W++++L E +Q+ TL +C+N S I +SKNP+ H R+KHI +R+HF+++
Sbjct: 1159 ASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRE 1218
Query: 1514 LVEE 1517
LV+E
Sbjct: 1219 LVKE 1222
Score = 38.1 bits (87), Expect = 0.039
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 36/150 (24%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+KILR+L +KF V AIEE+ +I + VD L SL E ++
Sbjct: 118 EKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNL----------------- 160
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRKKEE 264
S D +E + +A + R R R P + G + R
Sbjct: 161 -----SRHDVEERVLKAETQW--------RPDGGRGRGGSPSRGRGRGGYQGRGRGYVNR 207
Query: 265 DKYNKSKGVQCHECEGYEHIKAECATYLKK 294
D V+C +C H KAEC ++ K+
Sbjct: 208 DT------VECFKCHKMGHYKAECPSWEKE 231
>At4g04420 putative transposon protein
Length = 1008
Score = 284 bits (726), Expect = 3e-76
Identities = 203/658 (30%), Positives = 319/658 (47%), Gaps = 109/658 (16%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
+K+LR LP +F+ K TA+ + D SI +E++G LQ +E+ + SK +A ++
Sbjct: 171 KKLLRCLPSRFESKRTAMGTSLDTDSIDFEEVVGMLQAYELEITSGKGGYSKGLALAASA 230
Query: 205 EDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRKKEE 264
+ ++ E L + +SM+ + F++ +RR E++ G++ R +
Sbjct: 231 KKNEIQE------LKDTMSMMAKDFSRAMRRVEKK----------GFGRNQGTDRYR--- 271
Query: 265 DKYNKSKGVQCHECEGYEHIKAECATYLKK---------LGKGMV-------------AT 302
D+ +K +QCHEC+GY HIKAEC + +K LG ++
Sbjct: 272 DRSSKRDEIQCHECQGYGHIKAECPSLKRKDLKCSECNGLGHTKFDCVGSKSKPDKSCSS 331
Query: 303 WSDDDTGEEDEPQVMR--------LTVKCNSGS*SSDGEISEEE------------LAET 342
S+ D+ + D ++ + K S +DGE + + E
Sbjct: 332 ESESDSNDGDSEDYIKGFVSFVGIIEEKDESSDSEADGEDEDNSADEDSDIEKDVNINEE 391
Query: 343 YKLLFNNW------KDA-CEKGMKLEGVVKNLEVE------KQNFLILNGSLQEEVT-VL 388
++ L+++W K A E+ +K++ + + L+ E K + LI S+ EE L
Sbjct: 392 FRKLYDSWLMLSKEKVAWLEEKLKVQELTEKLKGELTAANQKNSELIQKCSVAEEKNREL 451
Query: 389 KSKIEGMIKYVRMLNNGTDVFDLILEIG*VAKDMTGLGYTEDPT-TEENRKISNKFIPAE 447
++ K + MLN+GT D IL G V K GLGY + T+ N S P +
Sbjct: 452 SQELSDTRKNIHMLNSGTKDLDSILAAGRVGKSNFGLGYNGAGSGTKTNFVRSEAAAPTK 511
Query: 448 KKTEFKMSNRMSQHVAQQGYQQIPYSYPPTQIMRSTT-WKCHHCGKHGHIRPYCYRLYGT 506
+T F+ + A++ YQ ++ Q R+ T ++C++CG+HGHI+ YCYR
Sbjct: 512 SQTGFR--SNYDAVPARRVYQ----NHDHYQSRRTVTGYECYYCGRHGHIQRYCYRYAAR 565
Query: 507 -----------PQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRASSKEDWYFDSGC 555
P RT++M+ + + VAYTS+ K+ WYFDSG
Sbjct: 566 LNKLKRQGKLYPYQGRTSKMYVR----------REDLYCHVAYTSIEEGIKKPWYFDSGA 615
Query: 556 SRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIVSGGSPNLSNVLLVEGLTANLI 615
SRHM + L+N S VTFG G K +IKG + P L+NV VEGLTANLI
Sbjct: 616 SRHMVGSQSNLENYTSVKESKVTFGGGDKRKIKGKGDLTKAEKPQLTNVYFVEGLTANLI 675
Query: 616 SISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQNKAMSSMCLVSMEDE 675
S+SQLCD L VS N C TNE + +TGVR+ +NCYMW + CL + +++
Sbjct: 676 SVSQLCDEGLTVSFNSVKCWATNEKNQNTLTGVRTGNNCYMWEEPKE-----CLRAEKED 730
Query: 676 AKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIGKQTKTSHKKLTQI 733
+WHQ+ GH+N SM +++SKE +RG+ LK E V GKQ + HK++ +
Sbjct: 731 PVVWHQRLGHMNARSMSEIVSKEMVRGVQELKHIEKIVYDAYNQGKQIRVQHKRVVGV 788
Score = 78.2 bits (191), Expect = 3e-14
Identities = 37/63 (58%), Positives = 48/63 (75%), Gaps = 1/63 (1%)
Query: 1457 SWCTQLLWMKHMLREYNVK-QDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLV 1515
S T++LWMKHM +Y + D + + C+N SAI ISKNP+QHS TKHI IRHHF+++LV
Sbjct: 908 SCSTKILWMKHMGLDYGMSFSDPLLVKCDNESAIAISKNPVQHSITKHIAIRHHFVRELV 967
Query: 1516 EEK 1518
EEK
Sbjct: 968 EEK 970
Score = 70.5 bits (171), Expect = 7e-12
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 1239 MIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQVKQMQDSIFISQSK 1298
+I +YV GG D +V+ FV+ M +EF +S+VGEL YF GLQ+ Q+ + I ISQS
Sbjct: 824 VINHVYVR---IGGTFDKLVKAFVKTMTTEFRLSMVGELKYFRGLQINQINEGIAISQST 880
Query: 1299 YAK*LVKKFGLEGSTHKRTPAAT 1321
YA+ LVK+F + S TP +T
Sbjct: 881 YAQNLVKRFDMCSSNPVETPMST 903
Score = 58.9 bits (141), Expect = 2e-08
Identities = 27/47 (57%), Positives = 32/47 (67%)
Query: 841 GVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSG 887
GVVERKN+T QE AR M+H VP W EAI+TACY+ V +R G
Sbjct: 787 GVVERKNQTFQEMARAMIHGHGVPEKFWTEAISTACYVINHVYVRIG 833
>At3g60170 putative protein
Length = 1339
Score = 281 bits (718), Expect = 3e-75
Identities = 192/687 (27%), Positives = 320/687 (45%), Gaps = 33/687 (4%)
Query: 434 EENRKISNKFIPAEKKTEFKMSNRMSQHVAQQGYQQIPYSYPPTQ-----IMRSTTWKCH 488
EE+ +S I + R++ HV ++ ++ + P+Q + R + +
Sbjct: 179 EESNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGRGR 238
Query: 489 HCGKHGHIRPY--CYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRASSK 546
G+ G R CY+ + H++ N E + + + + +A+
Sbjct: 239 GRGRSGTNRAIVECYKCHNLG-HFQYECPEWEKNANYAELEEEEELLLMAYVEQNQANRD 297
Query: 547 EDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRI--KGSEKI-VSGGSPNLSN 603
E W+ DSGCS HM K + ++ V G+ + + KGS K+ V+G + +
Sbjct: 298 EVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPE 357
Query: 604 VLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQNKA 663
V V L NL+S+ QL + L + C V + ++ +M S + +
Sbjct: 358 VYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQ 417
Query: 664 MSSMCLVS---MEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIG 720
+S+CL + M+ E LWH + GHLN +K + K+ + G+P LK ++ +C C G
Sbjct: 418 KNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKE-ICAICLTG 476
Query: 721 KQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLAEK 780
KQ + S K T ++ LQL+H D+ GP+ S GKRY+ +DDF+R TWV FL EK
Sbjct: 477 KQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEK 536
Query: 781 SETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQN 840
SE F F+ ++ E G + +R+D G EF + +F E+C + GI + +A TPQQN
Sbjct: 537 SEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQN 596
Query: 841 GVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGKK 900
GV ERKNRT+ + R ML ++VP W+EA + +I R + T E W G+K
Sbjct: 597 GVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRK 656
Query: 901 PTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESINV 960
P V+YF VF Y+ ++R KLD KS + +FLG S SKA+R+++ K ++ S +V
Sbjct: 657 PVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDV 716
Query: 961 VVDDMVS--------SLNEINVDGDDNVPQIVDERPNDCDIRSDTEPEEEKEQESSKEIV 1012
V D+ S E+ ++ D + E + S + SS +
Sbjct: 717 VFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILA 776
Query: 1013 PS--------IRIQKMHLKENIIGN--LNEGVVTRSRDIIANACFISKIEPKNIKEALTD 1062
PS ++ + + + EG + +++ +P +A+ D
Sbjct: 777 PSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKD 836
Query: 1063 EYWINAMQEELSQFKRNEVWDLVPRPE 1089
+ W AM+ E+ +N W+L P+
Sbjct: 837 KIWREAMEHEIESIVKNNTWELTTLPK 863
Score = 248 bits (632), Expect = 2e-65
Identities = 115/293 (39%), Positives = 193/293 (65%), Gaps = 3/293 (1%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ TLF K+ G ++I +YVDD++F G M + F + M EFEMS +G++ +F G++V
Sbjct: 1002 EHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEV 1061
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
KQ IFI Q +YA+ ++ +FG++ S + P KLTKDE+G VD+++++ ++ S
Sbjct: 1062 KQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGS 1121
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSN--L 1403
L+YLT +RPD+ + + + +R+ + P+ SH + KRI++Y+ GT + G FY N + L
Sbjct: 1122 LMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKL 1181
Query: 1404 ISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLL 1463
+++ D+D+AG+ +D +STSG F + + I W +KKQ V+LSTTEAEYIAA Q +
Sbjct: 1182 MAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCV 1241
Query: 1464 WMKHMLREYNVKQDVMT-LYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLV 1515
W++ +L + ++ T + C+N S I +SK+P+ H ++KHI++R H+++DLV
Sbjct: 1242 WLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLV 1294
Score = 43.1 bits (100), Expect = 0.001
Identities = 21/43 (48%), Positives = 29/43 (66%)
Query: 146 KILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVN 188
KILRSL KF+ V +IEE+ D+ ++ +DEL GSL E +N
Sbjct: 162 KILRSLTPKFNYVVCSIEESNDLSTLSIDELHGSLLVHEQRLN 204
>At3g25450 hypothetical protein
Length = 1343
Score = 272 bits (696), Expect = 9e-73
Identities = 180/580 (31%), Positives = 285/580 (49%), Gaps = 36/580 (6%)
Query: 539 TSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI--VSG 596
T L + WY D+G S HM + + + T V FGD + IKG I +S
Sbjct: 282 TELESCINNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISK 341
Query: 597 GSPN--LSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNC 654
G L +V + L +N++S+ Q + ++ + T+ + +++ RS++
Sbjct: 342 GGERKILFDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRL 401
Query: 655 YMWSPQNKAMSSMCL-VSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKV 713
Y S + + +S CL ++ +E+ +WH + GH++ ++K +I KE + GI +E +
Sbjct: 402 YKVSLEVE--NSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKET 459
Query: 714 CGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTW 773
CG C GKQ + S K T + L+L+H DL GP+ + KRYVFV +DD SR+ W
Sbjct: 460 CGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMW 519
Query: 774 VNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSA 833
L EKSE F F+E ++ E G I R+D G EF + +F E+C EGI +A
Sbjct: 520 SILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTA 579
Query: 834 PITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLY 893
P TPQQNGVVER+NRTL R +L +P +LW EA+ + Y+ RV RS ++ T Y
Sbjct: 580 PYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPY 639
Query: 894 ELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKT 953
E++K KKP V++ VF Y + +KLD +S ++LG SKAYR+ + +
Sbjct: 640 EVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRR 699
Query: 954 MMESINVVVDDMVS-------------------SLNEINVDG-DDNVPQIVDERPNDCDI 993
+ S +VV D+ S +L+E +G +N E + +I
Sbjct: 700 IFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEI 759
Query: 994 RSD-----TEPEEEKEQESSKEIVPSIRIQKMHLKENIIGNLNEGVVTRSRDIIANACFI 1048
+ E E E+ +S +E P R Q+ ++ N + + V + +
Sbjct: 760 NGEDENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYL----KDYVLCAEIEAEHLLLA 815
Query: 1049 SKIEPKNIKEALTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
EP + KEA + W +A +EE+ ++N W LV P
Sbjct: 816 VNDEPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLP 855
Score = 214 bits (544), Expect = 4e-55
Identities = 104/299 (34%), Positives = 187/299 (61%), Gaps = 1/299 (0%)
Query: 1219 RYNKRGIDKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELN 1278
++ K + +L+ K +G +++ +YVDD++ G + ++ +F + M +FEMS +G+L
Sbjct: 988 KFEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLT 1047
Query: 1279 YFPGLQVKQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSL 1338
Y+ G++V Q +D I + Q +YAK ++++ G+ TP ++L+K + +D++
Sbjct: 1048 YYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETD 1107
Query: 1339 YRSMICSLLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHN 1398
YR I L YL +RPD+++++ + +RY P+ESH +K+I++Y+ GTT +G ++
Sbjct: 1108 YRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKG 1167
Query: 1399 SNSNLISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSW 1458
N+ LI Y D+ + DDGKST G F+L + I+W ++KQ V+LS+ EAE++AA
Sbjct: 1168 ENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEA 1227
Query: 1459 CTQLLWMKHMLRE-YNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
Q +W++ +L E + + +T+ +N SAI ++KNP+ H R+KHI R+HFI++ VE
Sbjct: 1228 AKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVE 1286
Score = 38.1 bits (87), Expect = 0.039
Identities = 27/136 (19%), Positives = 65/136 (46%), Gaps = 21/136 (15%)
Query: 145 QKILRSLP-KKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSN 203
+K L+SLP KK+ V A+E+ D+ + +++ G ++T+E V + D ++
Sbjct: 153 KKFLKSLPRKKYIHIVAALEQVLDLKTTTFEDIAGRIKTYEDRVWDDDDSHEDQGKLMTE 212
Query: 204 TEDD--DASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRK 261
E++ D E++ +E +++ I +++++ + +++
Sbjct: 213 VEEEVVDDLEEEEEEVINKEIKAKSHVIDRLLKLIRLQ------------------EQKE 254
Query: 262 KEEDKYNKSKGVQCHE 277
KEED ++++ + HE
Sbjct: 255 KEEDDTHEAESLMMHE 270
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 267 bits (683), Expect = 3e-71
Identities = 189/644 (29%), Positives = 304/644 (46%), Gaps = 83/644 (12%)
Query: 486 KCHHCGKHGHIRPYCY-----RLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTS 540
KC+ CGK GH C R + T + + H + E T+
Sbjct: 273 KCYKCGKIGHYANECRSKNKERAHVTLEEEDVNEDHMLFSASEEE------------STT 320
Query: 541 LRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTF--GDGAKGRIKGSEKIVSG-G 597
LR ++ W DSGC+ HM + Y NI + GD KG +++ G
Sbjct: 321 LR---EDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHG 377
Query: 598 SPNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCY-- 655
+ NV LV GL NL+S+ Q+ V C + + N + +M + D +
Sbjct: 378 KRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEIMN-IEMTDKSFKI 436
Query: 656 -MWSPQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVC 714
+ S + +AM++ +++ E + WH++ GH++ ++++ KE + G+PR K+ ++ C
Sbjct: 437 KLSSVEEEAMTA----NVQTE-ETWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKE-TC 490
Query: 715 GECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWV 774
C +GKQ++ S K +Q T L+++H D+ GPM +S G RY + +DD++ WV
Sbjct: 491 KACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWV 550
Query: 775 NFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAP 834
FL +KSETF F++ ++ + I +R +C +EGI + + P
Sbjct: 551 YFLKQKSETFATFKKFKALVEKQSNCSIKTLR----------PMEVFCEDEGINRQVTLP 600
Query: 835 ITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRS-GTDSTLY 893
+PQQNG ERKNR+L E AR ML + +P LWAEA+ T+ Y+ R+ ++ D T
Sbjct: 601 YSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPM 660
Query: 894 ELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKT 953
E W G KP V + +F S CY+ ++RRKLD K+ G+ +GYS +K YRVF +
Sbjct: 661 EKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEK 720
Query: 954 MMESINVVVDD---------------MVSSLNEINVDGDD------NVPQIVDERPN--- 989
+ S +VV + V S+N+I D ++ QI D N
Sbjct: 721 VEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEG 780
Query: 990 --DCDIRSDTEPEEEKEQESSKEIVPSIR--IQKMHLKENIIGNLNEGVVTRSRDIIANA 1045
+ S +EE+E S + S++ ++K EN +G+ A
Sbjct: 781 ETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMEN--DEAAQGI---------EA 829
Query: 1046 CFISKIEPKNIKEALTDEYWINAMQEELSQFKRNEVWDLVPRPE 1089
C ++ EP+ EA D+ W AM EE+ ++N W LV +PE
Sbjct: 830 CLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPE 873
Score = 234 bits (598), Expect = 2e-61
Identities = 114/292 (39%), Positives = 178/292 (60%), Gaps = 5/292 (1%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
D L+ K G V+I +YVDD++ G + H++ F ++MK EFEM+ +G LNYF G++V
Sbjct: 1012 DAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEV 1071
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTD---VDQSLYRSM 1342
Q IF+SQ KYA L+ KFG++ S TP K K G D D + YR +
Sbjct: 1072 NQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGK-RKGVEGDDKEFADPTKYRRI 1130
Query: 1343 ICSLLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSN 1402
+ LLYL ASRPD+ ++ +RY ++P H KR+++Y+ GT+++G +
Sbjct: 1131 VGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPR 1190
Query: 1403 LISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQL 1462
L+ Y D+DW G+ +D KST+G F LG + W + KQ V+ ST EAEYIA + Q
Sbjct: 1191 LVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQA 1250
Query: 1463 LWMKHMLREYNVK-QDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKD 1513
+W++ + ++ +K ++ + + C+N SAI I +NP+QH RTKHI+I++HF+++
Sbjct: 1251 IWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVRE 1302
Score = 55.5 bits (132), Expect = 2e-07
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 145 QKILRSLPKKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSNT 204
QKIL SLP KFD V+ +E+ +D+ ++ + EL+G L+ E V R + + +V +
Sbjct: 161 QKILISLPAKFDSIVSVLEQTRDLDALTMSELLGILKAQEARVTAREESTKEGAFYVRSK 220
Query: 205 EDDDASEKDSDEN-LSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRKKE 263
+ ++D+ N +++ G F+K + E R K D GK
Sbjct: 221 GRESGFKQDNTNNRVNQDKKWCG--FHKSSKHTEEECREK--PKNDDHGK---------- 266
Query: 264 EDKYNKSKGVQCHECEGYEHIKAECATYLKKLGKGMVATWSDDDTGEE 311
NK ++C++C H EC + K+ T ++D E+
Sbjct: 267 ----NKRSNIKCYKCGKIGHYANECRSKNKERAH---VTLEEEDVNED 307
>At2g05960 putative retroelement pol polyprotein
Length = 1200
Score = 261 bits (667), Expect = 2e-69
Identities = 179/573 (31%), Positives = 280/573 (48%), Gaps = 30/573 (5%)
Query: 543 ASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIV----SGGS 598
A S + WY D+G S HM + + + T V FGD ++ I+G I+ +G
Sbjct: 251 ACSDKAWYLDNGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGKGSILFLTKNGEP 310
Query: 599 PNLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWS 658
L+NV + L +N+IS+ Q + +V T+ + + +++ RS++ Y
Sbjct: 311 KTLANVYYIPDLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVKATRSRNRLYRVE 370
Query: 659 PQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQ 718
+ K + L ++ D K WH + GH+N ++K +++KE + GIP +E ++C C
Sbjct: 371 LKVKNTKCLQLAALNDLTK-WHARLGHINLETIKAMVTKEFVIGIPSAP-KEKEICASCM 428
Query: 719 IGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLA 778
+GKQ + K T ++ L+L+H DL GP+ + +RY+ V +DD SRF W L
Sbjct: 429 LGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDHSRFMWSFLLK 488
Query: 779 EKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQ 838
EKSE F F+ ++ E G I +R+D G EF + +F +C EGI +AP TPQ
Sbjct: 489 EKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGIIRHLTAPYTPQ 548
Query: 839 QNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKG 898
QNGVVER+NRTL R ++ VP +LW EAI A Y+ RV R+ + T YE K
Sbjct: 549 QNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALINQTPYEALKK 608
Query: 899 KKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESI 958
KKP V++ VF Y + RKLD +S ++LG SKAY + + T+ ++ S
Sbjct: 609 KKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLDPTTRKIIVSR 668
Query: 959 NVVVDDMVS----SLNEINVDGDDNVPQIVD-ERPNDCDIRSDTEPE-EEKEQESSKEIV 1012
+VV D+ S + I + + + + E N+ ++ ++T E EE E E S
Sbjct: 669 DVVFDENKSWKWANSELIEIQKEPGMFTLAQTEFHNNEEVENETSEEIEENEAEDSTNKD 728
Query: 1013 PSIRIQKMHLKENIIGNLNEGVVTRS-RDIIANA----------------CFISKIEPKN 1055
+ + + E + + V TRS R +I A + EP +
Sbjct: 729 AEDGLDEPSVPEPNHSD-DVPVFTRSGRQVIKPAHLNDYVLLAEIEGERLLLLINDEPWD 787
Query: 1056 IKEALTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
KEA W +A EE+ +N W LV P
Sbjct: 788 FKEANKYREWRDACDEEIKSIIKNRTWSLVSLP 820
Score = 117 bits (294), Expect = 4e-26
Identities = 78/274 (28%), Positives = 128/274 (46%), Gaps = 66/274 (24%)
Query: 1243 IYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQVKQMQDSIFISQSKYAK* 1302
+YVDD++ G S +++ F + M FEMS +G L Y+ G++V Q +D I + Q +YAK
Sbjct: 933 VYVDDLLVTGSSPKLIDDFKKGMSKNFEMSDLGRLTYYLGIEVTQEEDGIILKQERYAKK 992
Query: 1303 LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICSLLYLTASRPDIAFSIDV 1362
++++ G+ P + ++L+K +D YR I
Sbjct: 993 ILEEAGINECKSILVPMNSGLELSKALDEKSIDGQQYRRSI------------------G 1034
Query: 1363 CARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLISYCDADWAGNADDGKSTS 1422
C RY P+ESH +K++++Y+ GTT YG + + L+ Y DA + +ADD
Sbjct: 1035 CLRYMQDPRESHGAALKQVLRYLQGTTGYGLVFKKGDKTGLVGYSDASHSVDADD----- 1089
Query: 1423 GGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWMKHMLREYNVKQDVMTLY 1482
+L+ AE I G+ C + +TL
Sbjct: 1090 --------DLL----------------AEVI--GTPCER-----------------VTLR 1106
Query: 1483 CENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
+N SAI ++KNP+ H R+KHI ++HFI++ VE
Sbjct: 1107 VDNKSAIALTKNPVFHGRSKHIHRKYHFIRECVE 1140
Score = 32.0 bits (71), Expect = 2.8
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 145 QKILRSLP-KKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSV-------NERSDKKSK 196
+K L+SLP KK+ V A+E+ D+ + +++G ++T+E + + ++++ K
Sbjct: 111 KKFLKSLPTKKYIHIVAALEQVLDLKNTTFKDIVGRIKTYEDKIWVLITCLKKEAEEEEK 170
Query: 197 SIAFVSNTED 206
S+ V E+
Sbjct: 171 SVVGVEAEEE 180
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 248 bits (632), Expect = 2e-65
Identities = 181/623 (29%), Positives = 288/623 (46%), Gaps = 42/623 (6%)
Query: 487 CHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIV---TALVAYTSLRA 543
C+ C K GH C + Q + + +I +V V A
Sbjct: 215 CYRCDKTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEA 274
Query: 544 SSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIV----SGGSP 599
S WY D+G S HM + + T V FGD ++ IKG IV G
Sbjct: 275 CSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRK 334
Query: 600 NLSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSP 659
L++V + L +N+IS+ Q + +AGC V +++++ + ++ C +
Sbjct: 335 TLTDVYFIPDLKSNIISLGQ---------ATEAGCDVRMKDDQLTL---HDREGCLLLRA 382
Query: 660 QNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQI 719
++ + + V + E + K L +M + KE + GI + +E + CG C +
Sbjct: 383 -TRSRNRLYKVDLNVE----NVKCLQLEAATM---VRKELVIGISNIP-KEKETCGSCLL 433
Query: 720 GKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLAE 779
GKQ + K T ++ L+L+H DL GP+ + + KRY+ V +DD +R+ W L E
Sbjct: 434 GKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKE 493
Query: 780 KSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQ 839
KSE FE FR+ +++ E G I R+D G EF + +F ++C EGI +AP TPQQ
Sbjct: 494 KSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQ 553
Query: 840 NGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGK 899
NGVVER+NRTL R +L K+P +LW EA+ + YI RV RS + T YE++K +
Sbjct: 554 NGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQR 613
Query: 900 KPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESIN 959
KP V++ VF Y + RKLD +S ++LG SKAYR+ + + +++ N
Sbjct: 614 KPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNN 673
Query: 960 V------VVDDMVSSLNEINVDGDDNVPQIVDERPNDCDIRSDTEPEE----EKEQESSK 1009
+ +L E +G I E+ + S E E E+EQ ++
Sbjct: 674 SDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAE 733
Query: 1010 EIVPSIRIQKMHLKENI--IGNLN--EGVVTRSRDIIANACFISKIEPKNIKEALTDEYW 1065
E PS L+ + +G N + V + EP + KEA + W
Sbjct: 734 ETQPSHATPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEANKLKEW 793
Query: 1066 INAMQEELSQFKRNEVWDLVPRP 1088
+A +EE+ ++N+ W L+ P
Sbjct: 794 RDACKEEILSIEKNKTWSLIDLP 816
Score = 189 bits (480), Expect = 1e-47
Identities = 95/292 (32%), Positives = 172/292 (58%), Gaps = 1/292 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
+ +++ + + K++I IYVDD++ G S ++ F + M +FEMS +G+L Y+ G++V
Sbjct: 956 EPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEV 1015
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
++ I + Q +YA ++++ G+ P A ++L K + + + YR MI
Sbjct: 1016 LHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGC 1075
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L Y+ +RPD+++ + V +RY P+ESH +K++++Y+ GT +G + S L+
Sbjct: 1076 LRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVG 1135
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
Y D+ + + DDGKST+G F+L I+W ++KQ V+LS+ EAE++AA Q +W+
Sbjct: 1136 YSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWL 1195
Query: 1466 KHMLREY-NVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
+ + E + + + +N SAI ++KN + H R+KHI R+HFI++ VE
Sbjct: 1196 QDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVE 1247
Score = 37.0 bits (84), Expect = 0.087
Identities = 42/184 (22%), Positives = 76/184 (40%), Gaps = 35/184 (19%)
Query: 145 QKILRSLP-KKFDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSN 203
+K L+SLP KK+ + A+E+ D+ + ++++G ++T+E V
Sbjct: 117 KKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRV---------------- 160
Query: 204 TEDDDASEKDSDENLSEAISMLGRKFNKVVRRFERRPRPNVPDKRSDIGKHSDFARRKKE 263
++DD+ E+ + + S + + R G+ S R
Sbjct: 161 CDEDDSPEEQGKLMYANSESSYDTRGGRGRGR----------------GRSSGRGRGGYG 204
Query: 264 EDKYNKSKGVQCHECEGYEHIKAECATYLKKLGKGMVATWSDDDTGEEDEPQVMRLTVKC 323
+ +KSK V C+ C+ H +EC L KL K +++D +E E +M V
Sbjct: 205 YQQRDKSK-VICYRCDKTGHYASECLDRLLKLIKAQEQQQNNED-DDEIESLMMHEVVYL 262
Query: 324 NSGS 327
N S
Sbjct: 263 NERS 266
>At2g17490 putative retroelement pol polyprotein
Length = 822
Score = 244 bits (623), Expect = 3e-64
Identities = 137/425 (32%), Positives = 218/425 (51%), Gaps = 9/425 (2%)
Query: 544 SSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGS---EKIVSGGSPN 600
S W DSGC+ HM + I + G+GA +G E +
Sbjct: 25 SGGNTWLIDSGCTNHMTPNEKLFTKINRDFKVPIRVGNGAVMMSEGKGDIEVMTRKDKRG 84
Query: 601 LSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNE-NEEVVMTGVRSKDNCYMWSP 659
+ +VLLV L NL+S+ Q+ V+ CT+ + +++ + +K W
Sbjct: 85 IRDVLLVPKLGKNLLSVPQMIINGYQVTLKNNYCTIHDSARKKIGEVEMVNKSFHLRWLS 144
Query: 660 QNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQI 719
+ +V+ ++ +LWH++ GH +++K + SKE + G+P+ +EE K C C +
Sbjct: 145 NEET----AMVAKDEATELWHKRLGHTGHSNLKILQSKEMVTGLPKFNVEEGK-CESCIL 199
Query: 720 GKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLAE 779
K ++ K ++ L+L+H D+ GPM S G RY+ +DD +R WV FL
Sbjct: 200 SKHSRDPFPKESETRAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKA 259
Query: 780 KSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQ 839
KSE F+ F++ ++ I K+R D G E+ + +FSE+ GI+ + +A +PQQ
Sbjct: 260 KSEVFQTFKKFKNLVENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQ 319
Query: 840 NGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGK 899
N V ER+NR+L E AR M+ AK +P LWAEA++ A Y R R+ + T E W
Sbjct: 320 NEVSERRNRSLVEMARAMIKAKDLPLKLWAEAVHVAAYAQNRTPTRTLKNKTPLEAWSDS 379
Query: 900 KPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESIN 959
KP+V + VF S CY+ E+RRK D KS +F+GYS +K YRV+ + + S +
Sbjct: 380 KPSVSHMKVFGSICYVHIPDEKRRKWDDKSKRAIFVGYSSQTKGYRVYLLKENKIDISRD 439
Query: 960 VVVDD 964
V+ D+
Sbjct: 440 VIFDE 444
Score = 142 bits (359), Expect = 1e-33
Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
D L+ K GK+++ IYVDD++ G + MVE F MK+EFEMS +G LNYF G+++
Sbjct: 639 DHALYTKEVLGKLLVVCIYVDDLIVTGDDEEMVEEFKTAMKNEFEMSDLGLLNYFLGMEI 698
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
Q + IF+SQ YA+ L+KKF +E S TP K ++E + D +YRS++
Sbjct: 699 VQSLEGIFLSQECYARKLLKKFNMEDSKIMSTPLLPQRK-DQEEDESLADSKVYRSLVGG 757
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
LLYLT++RP++ F +RY PK H KR+++YINGT D G + LI
Sbjct: 758 LLYLTSTRPNLMFFASYLSRYLKEPKIKHFKEAKRVLRYINGTIDMGMRFTSTMEPKLIG 817
Query: 1406 YCDAD 1410
+ D+D
Sbjct: 818 HSDSD 822
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 242 bits (617), Expect = 1e-63
Identities = 177/647 (27%), Positives = 286/647 (43%), Gaps = 52/647 (8%)
Query: 487 CHHCGKHGHIRPYCYRLY--GTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRAS 544
C CGK GH + CY+ + + +S + P ++ A + S
Sbjct: 221 CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLLATDETLVVTDS 280
Query: 545 SKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIV----SGGSPN 600
+W D+GCS HM K + + K S+ +V G+ +KG I G
Sbjct: 281 IANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVI 340
Query: 601 LSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQ 660
L++V + +T NLIS+ L D S G + ++ G + +D Y+
Sbjct: 341 LTDVRYMPNMTRNLISLGTLEDRGCWFKSQD-GILKIVKGCSTILKG-QKRDTLYILDGV 398
Query: 661 NKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIG 720
+ S ++DE LWH + GH++ M+ ++ K +R R I+E + C +C G
Sbjct: 399 TEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLR---REVIKELEFCEDCVYG 455
Query: 721 KQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKE-SFGGKRYVFVCVDDFSRFTWVNFLAE 779
KQ + S + T L +H DL G H S G +Y VDD+SR W+ FL +
Sbjct: 456 KQHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRK 514
Query: 780 KSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQ 839
K E FE F E + ++ + + K+R+D+G E+ N F ++C EGI + TPQQ
Sbjct: 515 KDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQ 574
Query: 840 NGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGK 899
NG+ ER NRT+ + R ML + WAEA +TA Y+ R + E W G
Sbjct: 575 NGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGA 634
Query: 900 KPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESIN 959
P + F YI D + KL+P+S +G+F Y K Y+V+ K + S N
Sbjct: 635 LPDLSSLRKFGCLAYIHAD---QGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRN 691
Query: 960 VVVDDMV---------------SSLNEINVDGDDNVPQIVDE--------RPNDCD---- 992
V+ + V S L ++ V+ D N + D+ P++
Sbjct: 692 VIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHN 751
Query: 993 --IRSDTEPEEEKEQESSKEIVPSIRIQKMHLKENIIGNLNEGVVTRSRDIIANACFI-- 1048
+ S T ++E+ +E + V + ++ +++ + + +++ A +
Sbjct: 752 PVLNSPTHSQDEESEEEDSDAVEDLSTYQL-VRDRVRRTIKANPKYNESNMVGFAYYSED 810
Query: 1049 -SKIEPKNIKEALTD---EYWINAMQEELSQFKRNEVWDLVPRPEVV 1091
K EPK+ +EAL D E W AM+EE+ +N WDLV +PE V
Sbjct: 811 DGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKV 857
Score = 171 bits (433), Expect = 3e-42
Identities = 95/308 (30%), Positives = 166/308 (53%), Gaps = 12/308 (3%)
Query: 1219 RYNKRGIDKTLFVKSDGGKVMI-AQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGEL 1277
+Y + D ++ K G I +YVDD++ + V + + EFEM +G+
Sbjct: 988 KYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDA 1047
Query: 1278 NYFPGLQVKQMQDS--IFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVD 1335
G+++ + +D+ + +SQ Y K +++ F ++ + TP H KL K + + +
Sbjct: 1048 KKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKL-KAATDKEYE 1106
Query: 1336 QSL-------YRSMICSLLY-LTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYING 1387
+ Y + I S++Y + +RPD+A+S+ V +R+ + P + H VK +++Y+ G
Sbjct: 1107 EQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRG 1166
Query: 1388 TTDYGTFYAHNSNSNLISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLST 1447
T + + L YCD+D+ N D +S +G F +G N ISW +K Q V++S+
Sbjct: 1167 TEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISS 1226
Query: 1448 TEAEYIAAGSWCTQLLWMKHMLREYNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIR 1507
TEAEY+A + LW+K E QD + ++ ++ SAI ++KN + H RTKHIDIR
Sbjct: 1227 TEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIR 1286
Query: 1508 HHFIKDLV 1515
HFI+D++
Sbjct: 1287 LHFIRDII 1294
>At2g10610 pseudogene
Length = 531
Score = 231 bits (588), Expect = 3e-60
Identities = 127/361 (35%), Positives = 198/361 (54%), Gaps = 6/361 (1%)
Query: 549 WYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIVS---GGSPNLS-NV 604
WY D+G S HM + Y D + T + FGD ++ IKG I G P + +V
Sbjct: 172 WYLDNGASNHMTGDRRYFDKMDHSITGKIRFGDDSRIDIKGKGTIAFIDLNGKPRVMLDV 231
Query: 605 LLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQNKAM 664
+ L +N+IS+ Q + + T+ ++ ++++ RS+++ Y +
Sbjct: 232 YFIPELKSNIISLGQATESGCEIKLKDGYLTMHDQEGKLLVKAERSRNSLYKVKMGLRKE 291
Query: 665 SSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIGKQTK 724
+ + L S + LWH + GH++ ++K +I KE I+G P L IE + VCG C +GKQT+
Sbjct: 292 ACLYLTSTS-MSSLWHARMGHVSLITLKSMIDKELIQGAPSLVIESE-VCGSCLLGKQTR 349
Query: 725 TSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLAEKSETF 784
S + T T+ L+L+H DL GP+ ++ G RY+FV +DD+SR+ W L EK + F
Sbjct: 350 QSFPQATVFRATKKLELIHGDLCGPITPKTSVGNRYIFVLIDDYSRYMWTVLLKEKGDAF 409
Query: 785 EVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQNGVVE 844
F+ ++ E G I +D G EF +G+F+ +C GI+ +AP TPQQNG VE
Sbjct: 410 FKFKNFKALVEKESGEKIQTFITDRGGEFVSGEFNSFCERTGIRRHLTAPYTPQQNGEVE 469
Query: 845 RKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGKKPTVK 904
R++RTL E AR +L +P +LW EAI + Y+ RV R+ D T YE ++ KKP V
Sbjct: 470 RRDRTLLEMARSILKHMHMPNYLWGEAIRHSTYLINRVATRALKDRTPYECFREKKPIVD 529
Query: 905 Y 905
+
Sbjct: 530 H 530
Score = 39.7 bits (91), Expect = 0.013
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 145 QKILRSLPKK-FDMKVTAIEEAQDIGSIKVDELIGSLQTFEMSVNERSDKKSKSIAFVSN 203
+K L+S+P+K + V A+E+ D+ +I D+++G L+ +E V + D + + +
Sbjct: 43 KKFLKSVPRKRYIHIVAALEQVLDLNAITFDDIVGRLKVYEERVYDEDDPEEDQSKLLYS 102
Query: 204 TEDDDASEKDSDE 216
+ D E + +E
Sbjct: 103 SMDSSKRESEGEE 115
>At1g37110
Length = 1356
Score = 214 bits (546), Expect = 2e-55
Identities = 178/646 (27%), Positives = 288/646 (44%), Gaps = 66/646 (10%)
Query: 487 CHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRASSK 546
C +C K GH++ CY R +M + + K + + ++ K
Sbjct: 256 CWYCKKEGHVKKDCYS--------RKKKMESEGQGEAGVITEKLVFSEALSVNEQMV--K 305
Query: 547 EDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI---VSGGSPN-LS 602
+ W DSGC+ HM S + + + + + + GD +G I GG+ L
Sbjct: 306 DLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILE 365
Query: 603 NVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQNK 662
NV V L NLIS L L + G +N + + G S N +
Sbjct: 366 NVKYVPHLRRNLISTGTLDKLGYRHEGGE-GKVRYFKNNKTALRG--SLSNGLYVLDGST 422
Query: 663 AMSSMCLVSMED-EAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIGK 721
MS +C + + LWH + GH++ ++K + K I R +I E + C C +GK
Sbjct: 423 VMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLI---DRKEINELEFCEHCVMGK 479
Query: 722 QTKTSHKKLTQIGTTRSLQLLHMDLMG-PMHKESFGGKRYVFVCVDDFSRFTWVNFLAEK 780
K S + + + +L +H DL G P S GK+Y +DD +R W+ FL K
Sbjct: 480 SKKVSFN-VGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYFLKSK 538
Query: 781 SETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQN 840
ETF+ F E ++ + + +R+D+G EF N +F YC GI+ + TPQQN
Sbjct: 539 DETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQN 598
Query: 841 GVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKGKK 900
GV ER NRT+ E R +L+ V WAEA TA Y+ R + + E+W +K
Sbjct: 599 GVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNRK 658
Query: 901 PTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESINV 960
P K+ F S Y+ + + KL P++ +G FLGY +K Y+V+ + + S NV
Sbjct: 659 PGYKHLRKFGSIAYV---HQDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEEKCVISRNV 715
Query: 961 VVDDMVSSLN-EINVDGDDNVPQ------IVDERP--------NDCDIRSDTEP--EEEK 1003
V + V + ++ D DN+ Q V++ ++SD+EP E E+
Sbjct: 716 VFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQ 775
Query: 1004 EQESSKEIVPSIRIQKMH----------LKENIIGNLN-------EGVVTRSRDIIANAC 1046
+S +E+ S + Q+ ++ + N+N E VT + ++ N C
Sbjct: 776 SSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVEN-C 834
Query: 1047 FISKIEPKNIKEALTD---EYWINAMQEELSQFKRNEVWDLVPRPE 1089
+ EP++ +EA+ E W A +E+ +N WDLV +P+
Sbjct: 835 IVQ--EPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPK 878
Score = 177 bits (448), Expect = 5e-44
Identities = 89/280 (31%), Positives = 159/280 (56%), Gaps = 6/280 (2%)
Query: 1243 IYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQVKQMQDS--IFISQSKYA 1300
+YVDD++ G S + + +EFEM +G + G+ + + + + +SQ Y
Sbjct: 1036 LYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYI 1095
Query: 1301 K*LVKKFGLEGSTHKRTPAATHIKLT---KDESGTDVDQSLYRSMICSLLY-LTASRPDI 1356
+ ++ +F + G+ P H KL +++ D D Y S + S++Y + +RPD+
Sbjct: 1096 RKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDL 1155
Query: 1357 AFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLISYCDADWAGNAD 1416
A++I + +RY + P H VK +++Y+ G D + + + YCD+++A + D
Sbjct: 1156 AYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLD 1215
Query: 1417 DGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWMKHMLREYNVKQ 1476
+S SG F +G N +SW Q V++STTEAEYIA + +W+K +L++ ++Q
Sbjct: 1216 RRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQ 1275
Query: 1477 DVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
D + ++C++ SAI +SKN + H RTKHID+R ++I+D+VE
Sbjct: 1276 DKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVE 1315
>At3g45520 copia-like polyprotein
Length = 1363
Score = 207 bits (528), Expect = 3e-53
Identities = 169/665 (25%), Positives = 284/665 (42%), Gaps = 91/665 (13%)
Query: 487 CHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALV---------- 536
C CG+ GH++ C P + + +N N+V V
Sbjct: 248 CWICGEDGHLKSTC------PNKNKPQFKNQGSNKGESSGGKGNLVEGSVNFVESAGMFV 301
Query: 537 --AYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIV 594
A +S +++W D+GC HM + +L++ + V G+ + R+KG +
Sbjct: 302 SEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTV- 360
Query: 595 SGGSPNLSNVLLVEGLTANLISISQLCDLDLNVSS----NKAGCTVTNEN--------EE 642
++ GLT L ++ + D+D N+ S KAG +EN +
Sbjct: 361 --------RIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENGMLRIKSGNQ 412
Query: 643 VVMTGVRSKDNCYMWSPQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRG 702
V++ G R D Y+ + S+ + D+ LWH++ H++ +M +I K +
Sbjct: 413 VLLEG-RRYDTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSLLIKKGFL-- 469
Query: 703 IPRLKIEEDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMG-PMHKESFGGKRYV 761
+ K+ C +C G+ K L Q T + L+ +H DL G P S G +Y
Sbjct: 470 -DKKKVSMLDTCEDCIYGRAKKIGFN-LAQHDTKKKLEYVHSDLWGAPTVPMSLGNCQYF 527
Query: 762 FVCVDDFSRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEY 821
+DD++R WV FL K E FE F ++ + G + +R+D+G EF N F +
Sbjct: 528 ISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGF 587
Query: 822 CGNEGIKHEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYR 881
C +G + + TPQQNGVVER NRT+ E R ML +P WAEA +TA + +
Sbjct: 588 CEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINK 647
Query: 882 VTIRSGTDSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINS 941
+ + W GK P Y + ++ TD KL+ ++ +G+ +GY
Sbjct: 648 TPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDGG---KLNLRAKKGVLIGYPSGV 704
Query: 942 KAYRVFNSRTKTMMESINV------VVDDMVSSLNEINVDGDDNVPQIVDERPNDCDIRS 995
K Y+V+ K + S NV V D++ +++ + DD+ +D D+ +
Sbjct: 705 KGYKVWLIEEKKCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYID-----LDLEA 759
Query: 996 DTEPEEEKEQESSKEIVPSIR-------------------IQKMHLKENIIGNLNEGVVT 1036
D + EQ S ++ P+ R + + L +++ + +
Sbjct: 760 DKDNSSGGEQ-SQAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRERREIR 818
Query: 1037 RSR-----DIIANACFISK----IEPKNIKEALTDEYWIN---AMQEELSQFKRNEVWDL 1084
R D A A + ++ +EP + KEA+ DE W AM EE+ +N+ W
Sbjct: 819 APRRFDDEDYYAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTT 878
Query: 1085 VPRPE 1089
V RPE
Sbjct: 879 VTRPE 883
Score = 174 bits (441), Expect = 4e-43
Identities = 89/295 (30%), Positives = 168/295 (56%), Gaps = 9/295 (3%)
Query: 1232 KSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQVKQMQDS 1291
K M YVDD++ + ++ + + +FEM +G G+++ +++
Sbjct: 1030 KLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDREA 1089
Query: 1292 --IFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKL---TKDESGTD---VDQSLYRSMI 1343
+++SQ Y ++K F + S TP H+K+ T+++ T+ ++ Y S +
Sbjct: 1090 GVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATEEKLSTEEEYMNSVPYSSAV 1149
Query: 1344 CSLLY-LTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSN 1402
S++Y + +RPD+A+ + V +R+ + P + H + VK +++YI GT D Y NS+ +
Sbjct: 1150 GSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSDFS 1209
Query: 1403 LISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQL 1462
+ YCDAD+A + D +S +G F LG N ISW + Q V+ S+TE EY++ +
Sbjct: 1210 ICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEA 1269
Query: 1463 LWMKHMLREYNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEE 1517
+W+K +L+++ +Q + ++C++ SAI +SKN + H RTKHID++ HFI++++ +
Sbjct: 1270 IWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIAD 1324
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 206 bits (525), Expect = 6e-53
Identities = 170/660 (25%), Positives = 287/660 (42%), Gaps = 88/660 (13%)
Query: 487 CHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRASSK 546
C CG+ GH R C PQ ++ + ++ N+ A Y S SS
Sbjct: 248 CWTCGEEGHFRSSCPN-QNKPQFKQSQVVKGESSGG-----KGNLAEAAGYYVSEALSST 301
Query: 547 E-----DWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIVSGGSPNL 601
E +W D+GCS HM + + + V G+ R++G I S
Sbjct: 302 EVHLEDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNS--- 358
Query: 602 SNVLLVEGLTANLISISQLCDLDLNVSS----NKAGCTVTNEN--------EEVVMTGVR 649
+GLT L ++ + D+D N+ S KAG +E+ +V++TG R
Sbjct: 359 ------DGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRIKAGNQVLLTG-R 411
Query: 650 SKDNCYMWSPQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIE 709
D Y+ + + A S+ +V D+ LWHQ+ H++ +M+ ++ K + + K+
Sbjct: 412 RYDTLYLLNWKPVASESLAVVKRADDTVLWHQRLCHMSQKNMEILVRKGFL---DKKKVS 468
Query: 710 EDKVCGECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMG-PMHKESFGGKRYVFVCVDDF 768
VC +C GK + S L T L+ +H DL G P S G +Y +DDF
Sbjct: 469 SLDVCEDCIYGKAKRKSFS-LAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDF 527
Query: 769 SRFTWVNFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIK 828
+R WV F+ K E FE F E ++ + + +R+D+G EF N F +C + GI
Sbjct: 528 TRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIH 587
Query: 829 HEFSAPITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGT 888
+ TPQQNGV ER NRT+ E R ML +P WAEA +T + + +
Sbjct: 588 RHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALN 647
Query: 889 DSTLYELWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVF- 947
+ W G P Y + ++ TD KL+P++ +G+ +GY + K Y+V+
Sbjct: 648 FEIPDKKWSGNPPVYSYLRRYGCVAFVHTD---DGKLEPRAKKGVLIGYPVGVKGYKVWI 704
Query: 948 ----------------NSRTKTMM---ESINVVVDDMVSSLNEINVDGDDNVPQIVDER- 987
N+ K +M E+++ DD S E +++ + +V D+
Sbjct: 705 LDERKCVVSRNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEM 764
Query: 988 ------PNDCDIRSDTEPEEEKEQESSKEIVPSIRIQKMHLKENIIGNLNEGVVTRSR-- 1039
P + + T + +++S + + L +++ + ++ + R
Sbjct: 765 VNTIPAPESPVVSTPTTQDTNDDEDSD--------VNQSPLSYHLVRDRDKREIRAPRRF 816
Query: 1040 ---DIIANACFISK----IEPKNIKEALTD---EYWINAMQEELSQFKRNEVWDLVPRPE 1089
D A A + ++ +EP+N ++A D + W AM EE+ ++N W +V RPE
Sbjct: 817 DDEDYYAEALYTTEDGEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPE 876
Score = 172 bits (436), Expect = 1e-42
Identities = 92/294 (31%), Positives = 168/294 (56%), Gaps = 15/294 (5%)
Query: 1236 GKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV--KQMQDSIF 1293
G VM IYVDDI+ + + ++ FEM +G G+++ + ++
Sbjct: 1027 GSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVLW 1086
Query: 1294 ISQSKYAK*LVKKFGLEGSTHKRTP--------AATHIKLTKDESGTDVDQSL-YRSMIC 1344
+SQ Y +++ + + + TP AAT KL +DE D +S+ Y S +
Sbjct: 1087 LSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRDE---DFMKSVPYSSAVG 1143
Query: 1345 SLLY-LTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNL 1403
S++Y + +RPD+A+ + + +R+ + P + H + VK +++YI GT Y +S+ ++
Sbjct: 1144 SIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSSFSI 1203
Query: 1404 ISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLL 1463
+ YCDAD+A + D +S +G F LG N ISW + Q V+ STTE+EY++ + +
Sbjct: 1204 VGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAI 1263
Query: 1464 WMKHMLREYNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEE 1517
W+K +L+++ +Q + ++C++ SAI +SKN + H RTKHID+++HFI++++ +
Sbjct: 1264 WLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISD 1317
>At4g21360 putative transposable element
Length = 1308
Score = 203 bits (517), Expect = 5e-52
Identities = 175/636 (27%), Positives = 271/636 (42%), Gaps = 66/636 (10%)
Query: 487 CHHCGKHGHIRPYCYRLYGTPQHWRTTQMHTSTNPKIREWKPKNIVTALVAYTSLRA--- 543
C C K GH++ CY ++ K ++T + Y+ +
Sbjct: 257 CWFCKKEGHVKKDCYA--------GKRKLENEGQGKA------GVITEKLVYSEALSMYD 302
Query: 544 -SSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKI---VSGGSP 599
+K+ W DSGC+ HM S + + T+ + GD KGS + GGS
Sbjct: 303 QEAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGGSI 362
Query: 600 N-LSNVLLVEGLTANLISISQLCDLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWS 658
L NV V L NLIS L L EN+ + + + Y+
Sbjct: 363 RVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALCGNL--VNGLYVLD 420
Query: 659 PQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQ 718
+ + ++ +LWH + GH++ +MK + K + + I+E C C
Sbjct: 421 GHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLE---KKDIKELSFCENCV 477
Query: 719 IGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLA 778
+GK K S I T L +H DL G K+Y +DD SR W+ FL
Sbjct: 478 MGKSKKLSFNVGKHI-TDEVLGYIHADLWG---------KQYFLSIIDDKSRKVWLMFLK 527
Query: 779 EKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQ 838
K ETFE F E + ++ + + +R+D+G EF N KF E+C GI+ + TPQ
Sbjct: 528 TKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQ 587
Query: 839 QNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYELWKG 898
QNGV +R NRTL E R +L+ + WAEA TA Y+ R + + ELW
Sbjct: 588 QNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWLD 647
Query: 899 KKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESI 958
KKP K+ F Y+ D + KL P++ +G+FLGY +K Y+V+ + + S
Sbjct: 648 KKPGYKHLRRFGCIAYVHLD---QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVISR 704
Query: 959 NVVVDDMVSSLNEINVDGDDNVPQIVD-ERPNDCDIRSDTEPE---------EEKEQESS 1008
N+V ++ +I + +V I D E N+ + E EE +QES
Sbjct: 705 NIVFNEN-QVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQESD 763
Query: 1009 KE-------IVPSIRI---QKMHLKENIIGNLNEGVVTRSRDIIA--NACFISKIEPKNI 1056
E ++ SI + Q +E N + + + +A A I EP+
Sbjct: 764 SENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESEEPQCY 823
Query: 1057 KEALTDEYWI---NAMQEELSQFKRNEVWDLVPRPE 1089
+A D++WI M+EE+ +N WD+V P+
Sbjct: 824 HDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPK 859
Score = 137 bits (344), Expect = 6e-32
Identities = 80/298 (26%), Positives = 157/298 (51%), Gaps = 34/298 (11%)
Query: 1226 DKTLFVKS-DGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQ 1284
D ++VK + G+ + +YVDD++ S + + +FEM +G + G+
Sbjct: 999 DSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILGID 1058
Query: 1285 V--KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTK--DESGT-DVDQSLY 1339
+ + + ++ +SQ++Y ++++F + + TP H KLT DE G+ D + Y
Sbjct: 1059 IIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPEVVPY 1118
Query: 1340 RSMICSLLY-LTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHN 1398
S + S++Y + + PD+A+++ + +R+ + P
Sbjct: 1119 SSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP---------------------------G 1151
Query: 1399 SNSNLISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSW 1458
+N + YCD+D A + D +S SG F +G N +SW + Q+ V+LS+T+AE+IA
Sbjct: 1152 ANLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQAEFIALTEA 1211
Query: 1459 CTQLLWMKHMLREYNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
+ +W++ +L + ++ T++C++ SAI +SKN H RTKH++++ +FI+D++E
Sbjct: 1212 VKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFYFIRDIIE 1269
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 202 bits (515), Expect = 9e-52
Identities = 102/297 (34%), Positives = 171/297 (57%)
Query: 1220 YNKRGIDKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNY 1279
+ K+ D TLFV+ G + ++ +YVDDIV ++ + +K+ F++ +G L Y
Sbjct: 1120 FEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKY 1179
Query: 1280 FPGLQVKQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLY 1339
F GL+V + + I +SQ KYA L+ + P +I+L+K++ D+ +Y
Sbjct: 1180 FLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMY 1239
Query: 1340 RSMICSLLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNS 1399
R ++ L+YLT +RPDI F+++ ++ +AP+ +HL V ++++YI GT G FY+
Sbjct: 1240 RRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAED 1299
Query: 1400 NSNLISYCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWC 1459
+ L Y DADW D +ST+G F+G++LISW +KKQ VS S+ EAEY A
Sbjct: 1300 DLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALAS 1359
Query: 1460 TQLLWMKHMLREYNVKQDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVE 1516
++ W+ +L V V LY ++ +A+ I+ NP+ H RTKHI+I H +++ ++
Sbjct: 1360 CEMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLD 1416
Score = 194 bits (494), Expect = 3e-49
Identities = 152/569 (26%), Positives = 249/569 (43%), Gaps = 34/569 (5%)
Query: 536 VAYTSLRASSKEDWYFDSGCSRHMNSVKMYLDNIKPHSTSFVTFGDGAKGRIKGSEKIVS 595
V++ SL S + W DSG + H++ + + SFV G RI G ++
Sbjct: 432 VSHNSL---SSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLI 488
Query: 596 GGSPNLSNVLLVEGLTANLISISQLC-DLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNC 654
L NVL + NLISIS L DL V + + C + + + + + + N
Sbjct: 489 NKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNL 548
Query: 655 YMWSPQNKAMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVC 714
Y+ Q+ A+S +V + +WH++ GH S ++ S + G R K ++ C
Sbjct: 549 YVLDTQSPAISVNAVV----DVSVWHKRLGH---PSFSRLDSLSEVLGTTRHKNKKSAYC 601
Query: 715 GECQIGKQTKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWV 774
C + KQ K S I + + +LLH+D+ GP E+ G +Y VDD SR TW+
Sbjct: 602 HVCHLAKQKKLSFPSANNICNS-TFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWI 660
Query: 775 NFLAEKSETFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAP 834
L KS+ VF ++ + + +RSD+ KE F+E+ +GI S P
Sbjct: 661 YLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCP 717
Query: 835 ITPQQNGVVERKNRTLQESARVMLHAKKVPYHLWAEAINTACYIHYRVTIRSGTDSTLYE 894
TP+QN VVERK++ + AR ++ + W + + TA ++ R ++ T +E
Sbjct: 718 ETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFE 777
Query: 895 LWKGKKPTVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTM 954
+ GK P F CY T +QR K P+S +FLGY K Y++ + + +
Sbjct: 778 VLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVV 837
Query: 955 MESINVVVDD----MVSSLNEINVDGDDNVPQIVDERPNDCDIRSD-TEPEEEKEQESSK 1009
S NV + + SS D P +D + I S P+ + SK
Sbjct: 838 HISRNVEFHEELFPLASSQQSATTASDVFTP--MDPLSSGNSITSHLPSPQISPSTQISK 895
Query: 1010 EIVPSI--RIQKMHL-------KENIIGNLNEGVVTRSRDIIANACFISKIE-PKNIKEA 1059
+ +Q H I +L+ ++ S + N ISKI P++ EA
Sbjct: 896 RRITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINN--ISKIPIPQSYHEA 953
Query: 1060 LTDEYWINAMQEELSQFKRNEVWDLVPRP 1088
+ W A+ +E+ +R + W++ P
Sbjct: 954 KDSKEWCGAIDQEIGAMERTDTWEITSLP 982
>At4g27210 putative protein
Length = 1318
Score = 202 bits (513), Expect = 2e-51
Identities = 105/294 (35%), Positives = 168/294 (56%), Gaps = 1/294 (0%)
Query: 1226 DKTLFVKSDGGKVMIAQIYVDDIVFGGMSDHMVEHFVRHMKSEFEMSLVGELNYFPGLQV 1285
D +LF+ + +++ +YVDD+V G S + + + EF M+ +G+L+YF G+QV
Sbjct: 889 DPSLFIYAHNNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQV 948
Query: 1286 KQMQDSIFISQSKYAK*LVKKFGLEGSTHKRTPAATHIKLTKDESGTDVDQSLYRSMICS 1345
++ Q+ +F+SQ KYA+ L+ +E T TP + + D + +RS+
Sbjct: 949 QRQQNGLFMSQQKYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGK 1008
Query: 1346 LLYLTASRPDIAFSIDVCARYQAAPKESHLIHVKRIIKYINGTTDYGTFYAHNSNSNLIS 1405
L YLT +RPDI F+++ + P S +KRI++YI GT G Y+ +S + L +
Sbjct: 1009 LQYLTLTRPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQA 1068
Query: 1406 YCDADWAGNADDGKSTSGGCFFLGNNLISWFNKKQNCVSLSTTEAEYIAAGSWCTQLLWM 1465
Y D+DW +S G C F+G NL+SW +KK VS S+TEAEY + +++LW+
Sbjct: 1069 YSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWL 1128
Query: 1466 KHMLREYNVK-QDVMTLYCENLSAINISKNPIQHSRTKHIDIRHHFIKDLVEEK 1518
+LRE + D L+C+NLSA+ ++ NP H+RTKH DI HF+++ V K
Sbjct: 1129 STLLRELRIPLPDTPELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALK 1182
Score = 135 bits (339), Expect = 2e-31
Identities = 111/425 (26%), Positives = 178/425 (41%), Gaps = 51/425 (12%)
Query: 548 DWYFDSGCSRHMNSVKMYLDNIKP-HSTSFVTFGDGAKGRIK--GSEKIVSG-GSPNLSN 603
+W DS + H+ + L +P H T + DG I GS + S G+ L++
Sbjct: 176 EWLPDSAATAHVTNSPRSLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASSSGTVPLTD 235
Query: 604 VLLVEGLTANLISISQLC-DLDLNVSSNKAGCTVTNENEEVVMTGVRSKDNCYMWSPQNK 662
VL+ +T +L+S+S+L D V G V ++ + ++ ++D Y +
Sbjct: 236 VLVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGSNRDGLYCLKDDKQ 295
Query: 663 AMSSMCLVSMEDEAKLWHQK*GHLNPTSMKKVISKEAIRGIPRLKIEEDKVCGECQIGKQ 722
+ ++WH++ GH +P ++
Sbjct: 296 FQAFFSTRQRSASDEVWHRRLGHPHPQILQP----------------------------- 326
Query: 723 TKTSHKKLTQIGTTRSLQLLHMDLMGPMHKESFGGKRYVFVCVDDFSRFTWVNFLAEKSE 782
L+ +H DL GP S G RY V +D +SRF+W+ L KS+
Sbjct: 327 ----------------LERVHCDLWGPTTITSVQGFRYYAVFIDHYSRFSWIYPLKLKSD 370
Query: 783 TFEVFRELSQQLQGEKGYGIVKIRSDHGKEFENGKFSEYCGNEGIKHEFSAPITPQQNGV 842
+ +F + ++ + I + D G EF + KF ++ + GI+ + S P TPQQNG+
Sbjct: 371 FYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSCPHTPQQNGL 430
Query: 843 VERKNRTLQESARVMLHAKKVPYHLWAEAINTACY-IHYRVTIRSGTDSTLYELWKGKKP 901
ERK+R L E ML VP+ W EA TA + I+ T + YE KKP
Sbjct: 431 AERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISPYEKLYDKKP 490
Query: 902 TVKYFYVFESRCYILTDREQRRKLDPKSDEGLFLGYSINSKAYRVFNSRTKTMMESINVV 961
F S C+ K +P S + +FLGY+ K YR T + S +V+
Sbjct: 491 DYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPTGRLYISRHVI 550
Query: 962 VDDMV 966
D+ V
Sbjct: 551 FDESV 555
Score = 40.0 bits (92), Expect = 0.010
Identities = 29/127 (22%), Positives = 48/127 (36%), Gaps = 6/127 (4%)
Query: 966 VSSLNEINVDGDDNVPQIVDERPNDCDIRSDTEPEEEKEQESSKEIV---PSIRIQKMHL 1022
+SS++ + P ER D D S + + S E S+ + + H
Sbjct: 621 ISSVSHASNITTQQSPDFDSERTTDFDSASIGDSSHSSQAGSDSEETIQQASVNVHQTHA 680
Query: 1023 KENI---IGNLNEGVVTRSRDIIANACFISKIEPKNIKEALTDEYWINAMQEELSQFKRN 1079
N+ + G+ + + + +S EPK + AL W AM EE+
Sbjct: 681 STNVHPMVTRAKVGISKPNPRYVFLSHKVSYPEPKTVTAALKHPGWTGAMTEEIGNCSET 740
Query: 1080 EVWDLVP 1086
+ W LVP
Sbjct: 741 QTWSLVP 747
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.329 0.141 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,341,428
Number of Sequences: 26719
Number of extensions: 1452837
Number of successful extensions: 6951
Number of sequences better than 10.0: 172
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 6149
Number of HSP's gapped (non-prelim): 498
length of query: 1518
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1406
effective length of database: 8,326,068
effective search space: 11706451608
effective search space used: 11706451608
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0166.12