BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0166.1
(916 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17910 putative non-LTR retroelement reverse transcriptase 339 5e-93
At2g45230 putative non-LTR retroelement reverse transcriptase 338 1e-92
At3g32110 non-LTR reverse transcriptase, putative 318 7e-87
At1g47910 reverse transcriptase, putative 317 1e-86
At2g31520 putative non-LTR retroelement reverse transcriptase 317 3e-86
At2g25550 putative non-LTR retroelement reverse transcriptase 314 1e-85
At2g05200 putative non-LTR retroelement reverse transcriptase 312 6e-85
At3g45550 putative protein 298 7e-81
At2g41580 putative non-LTR retroelement reverse transcriptase 298 1e-80
At2g01840 putative non-LTR retroelement reverse transcriptase 298 1e-80
At2g16680 putative non-LTR retroelement reverse transcriptase 280 2e-75
At1g47850 hypothetical protein 278 1e-74
At1g31030 F17F8.5 278 1e-74
At1g25430 hypothetical protein 271 9e-73
At2g28980 putative non-LTR retroelement reverse transcriptase 267 2e-71
At4g10830 putative protein 266 4e-71
At3g44650 putative protein 264 2e-70
At2g05980 putative non-LTR retroelement reverse transcriptase 260 2e-69
At2g11240 pseudogene 256 4e-68
At3g25485 unknown protein 256 5e-68
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 339 bits (869), Expect = 5e-93
Identities = 262/883 (29%), Positives = 420/883 (46%), Gaps = 67/883 (7%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF FF++ W L+K +I+ F+E G L + N I LIPK +P+ ++D R
Sbjct: 424 PGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLR 483
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
ISL +YK+++K+L RL+ +P ++S Q +F R I++ +L+ +E++ ++ ++ R
Sbjct: 484 PISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTNDR 543
Query: 121 ---GGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
K D +KAYD +EW FL MM LGF +W WI +CV++ + +VL+NG P
Sbjct: 544 ISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQPYG 603
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVL-GPGVCLNHLQFADDT 236
+G+RQGDPLSP LF LC + L + N+ + G+ V +NHL FADDT
Sbjct: 604 HIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLFADDT 663
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L+ C + EEL ++ + SG +N KS + G NVD I + + G+ +
Sbjct: 664 LLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSRSGISLEG 723
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG +R + + EK++ L + ++S G+ V+L+S+A A+P+Y M
Sbjct: 724 GTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIALALPVYVM 783
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K P + + +M F W R+I W++W+++ K+ GG G + L+ N+A+
Sbjct: 784 SCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFGFKDLQCFNQAL 843
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K AWR QE +L+ RV ++Y NS L R SR + +++ +L
Sbjct: 844 LAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATR-------GSRPSYAWRSILFGRELL 896
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWV--ASKTLAVLYPRFYAMASNQDIMVSEAGVFSNL 533
+ R V+G+G + W D W+ S + RF N D+ VS+ +
Sbjct: 897 MQGLR----TVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFI----NVDLKVSQ--LIDPT 946
Query: 534 GWEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKT----FCM 589
WNL R F W++ E+I + + ++DS WL NG Y+VKT
Sbjct: 947 SRNWNLNMLRDLFPWKDV---EIILKQRPLF--FKEDSFCWLHSHNGLYSVKTGYEFLSK 1001
Query: 590 EVELQLYG----PPSWVVPSCVKKL----APQKVVLFLWQAAENRVAVMVNLHNRGVLVD 641
+V +LY PS V S K+ K+ +FLW+A + V L RG+ D
Sbjct: 1002 QVHHRLYQEAKVKPS--VNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSD 1059
Query: 642 AEAVCVLCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSLRKGS 701
C++C E++ H++ C A +W+ L S+ + + L + +
Sbjct: 1060 DG--CLMCDTENETINHILFECPLARQVWAITHLSSAGSE-FSNSVYTNMSRLIDLTQQN 1116
Query: 702 DLV-LWRLIPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMYWWIKAGKPHCSFSLC 760
DL R + + W +W RN L+F+G+ T+ D + W
Sbjct: 1117 DLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEW------------- 1163
Query: 761 DFLQNFGAVTVGQRVERCRQDVWTCPP-EGILKWNVDGAARGAPGMGGIGGVVRDATGEI 819
F A T Q E+ + CPP G LK N+ A G VVRD+ G++
Sbjct: 1164 -----FSAQTHMQNDEKHLKITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKV 1218
Query: 820 RGFFSMSLGVVFA-YEAEVKAIRTALEFSKEFGLSRVVVESDS 861
S V + Y A++++ ALE RV+ S +
Sbjct: 1219 LLHSRRSFNEVHSPYSAKIRSWEWALESMTHHHFDRVIFASST 1261
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 338 bits (866), Expect = 1e-92
Identities = 268/911 (29%), Positives = 424/911 (46%), Gaps = 84/911 (9%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG N +++FW + ++I +M + F+ G + +G+N I LIPK E +TD+R
Sbjct: 446 PGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFR 505
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
ISL IYK++ K++A RL+ ++P L+SE Q +F KGR I++ +LI +E++ + S+ +
Sbjct: 506 PISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNK 565
Query: 121 GG---FLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EW FL M LGF W I CV + VL+NG+P
Sbjct: 566 CSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHG 625
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGV-CLNHLQFADDT 236
+GLRQGDPLSP LF +C + L M + + G+ + G ++HL FADD+
Sbjct: 626 EIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDS 685
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSEL-VGCNVDS----AIVNQLAVEL-- 289
+ +C + ++ ++ + SG ++NY KS + G ++ + +L +E
Sbjct: 686 MFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREG 745
Query: 290 --GVVVGTLPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVA 347
GV +G LP + GS + + + +++ + SN +S G+ ++L++VA
Sbjct: 746 GEGVYLG-LPESFQGS-------KVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVA 797
Query: 348 SAIPIYHMAVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEF 407
A+P Y M+ +K P + IE +M F W GR + W AW + + K +GGLG +
Sbjct: 798 MALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKE 857
Query: 408 LKFRNKAMLLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVN 467
++ N A+L K WR E ++L +V ++Y S PL SR F +
Sbjct: 858 IEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPL-------NAPLGSRPSFAWKS 910
Query: 468 VVLEDSVLGKTFRDQCFCVVGDGLRISFWRDPWVASK--TLAVLYPRFYAM---ASNQDI 522
+ ++ + R V+G+G I+ W DPW+ +K A R + + A+N
Sbjct: 911 IYEAQVLIKQGIR----AVIGNGETINVWTDPWIGAKPAKAAQAVKRSHLVSQYAANSIH 966
Query: 523 MVSEAGVFSNLGWEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRY 582
+V + + W WNL + + + ++A G +R D W +G Y
Sbjct: 967 VVKDLLLPDGRDWNWNL----VSLLFPDNTQENILALRPGGKETR--DRFTWEYSRSGHY 1020
Query: 583 TVKT---FCMEVELQLYGPPSWVVPSC------VKKL-APQKVVLFLWQAAENRVAVMVN 632
+VK+ E+ Q P + PS + KL P K+ FLW+ N ++V N
Sbjct: 1021 SVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASN 1080
Query: 633 LHNRGVLVDAEAVCVLCGQAEESVTHLILVCKFAWVLW--SKVLLREGVVWCVPA----- 685
L R + E CV C E+V HL+ C FA + W S + G W
Sbjct: 1081 LAYRHLA--REKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPGGEWAESLFRNMH 1138
Query: 686 SILSLLKEWDSLRKGSDLVLWRLIPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMY 745
+LS+ K L+ W + W +W RN L+FKG E + V M
Sbjct: 1139 HVLSVHKSQPEESDHHALIPW------ILWRLWKNRNDLVFKGREFTAPQVILKATEDMD 1192
Query: 746 WWIKAGKPHCSFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGM 805
W +P VT R +RC + W P G +K N DGA G
Sbjct: 1193 AWNNRKEPQ------------PQVTSSTR-DRCVK--WQPPSHGWVKCNTDGAWSKDLGN 1237
Query: 806 GGIGGVVRDATGEIRGFFSMSL-GVVFAYEAEVKAIRTALEFSKEFGLSRVVVESDSTLA 864
G+G V+R+ TG + +L E EV+A+R A+ F RV+ ESDS
Sbjct: 1238 CGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFESDSQYL 1297
Query: 865 VGWVSKRANRP 875
V + + P
Sbjct: 1298 VSLIQNEMDIP 1308
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 318 bits (816), Expect = 7e-87
Identities = 263/927 (28%), Positives = 436/927 (46%), Gaps = 55/927 (5%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF F+++ W ++ E + + +F+ G + N + LI K PE +T +R
Sbjct: 986 PGPDGFQPVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVLKPEKITQFR 1045
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSG- 119
ISL ++K + KV+ RL+GV+ L+ Q SF GR + +++ EVV +M
Sbjct: 1046 PISLCNVLFKTITKVMVGRLKGVINKLIGPAQTSFIPGRLSTDNIVVVQEVVHSMRRKKG 1105
Query: 120 -RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEF 178
+G LLKLD KAYD I WD L + ++ G W WI CV ++ +L NG T+
Sbjct: 1106 VKGWMLLKLDLEKAYDRIRWDLLEDTLKAAGLPGTWVQWIMKCVEGPSMRLLWNGEKTDA 1165
Query: 179 FEIEKGLRQGDPLSPLLFNLCVQGL-SVMWNRLAIRERPCGVVLGPGVCLNHLQFADDTL 237
F+ +GLRQGDPLSP LF LC++ L ++ + +A ++ + G L+H+ FADD +
Sbjct: 1166 FKPLRGLRQGDPLSPYLFVLCIERLCHLIESSIAAKKWKPIKISQSGPRLSHICFADDLI 1225
Query: 238 VFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSEL-VGCNVDSAIVNQLAVELGVVVGTL 296
+F + Q+ L V+ F SG K++ KS++ NV + +++ E G+
Sbjct: 1226 LFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKNVLRDLGKRISEESGMKATKD 1285
Query: 297 PLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHMA 356
YLG + + + VI++ LA +S +GRL + ++V ++I ++ M+
Sbjct: 1286 LGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSFAGRLTLTKAVLTSILVHTMS 1345
Query: 357 VYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAML 416
K P + ++K+ R FLWG + ++ VAW +VC + GGLG+ NKA++
Sbjct: 1346 TIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHLVAWTRVCLPRREGGLGIRSATAMNKALI 1405
Query: 417 LKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVLG 476
K WR + +LW +V+ +KY + V R + + V V L D +
Sbjct: 1406 AKVGWRVLNDGSSLWAQVVRSKYKVGD---VHDRNWTVAKSNWSSTWRSVGVGLRDVI-- 1460
Query: 477 KTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGWE 536
+R+Q + V+GDG +I FW D W++ +A ++ Q + + GW+
Sbjct: 1461 --WREQHW-VIGDGRQIRFWTDRWLSETPIA--DDSIVPLSLAQMLCTARDLWRDGTGWD 1515
Query: 537 WNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKT-FCM------ 589
+ + F + + D L + V + D L W ++GR+TVK+ F M
Sbjct: 1516 MS---QIAPFVTDNKRLDLLAVIVDSVTGAH--DRLAWGMTSDGRFTVKSAFAMLTNDDS 1570
Query: 590 --EVELQLYGPPSWVVPSCVKKLAPQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEAVCV 647
+ LYG W K AP++V +FLW A+M N + + VC
Sbjct: 1571 PRQDMSSLYG-RVW------KVQAPERVRVFLWLVVNQ--AIMTNSERKRRHLCDSDVCQ 1621
Query: 648 LCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSLRKG--SDLVL 705
+C ES+ H++ C +W +++ R S+L L + +LR+G ++
Sbjct: 1622 VCRGGIESILHVLRDCPAMSGIWDRIVPRRLQQSFFTMSLLEWL--YSNLRQGLMTEGSD 1679
Query: 706 WRLIPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMYWWIKAGKPHCSFSLCDFLQN 765
W + W W R IF + + V +IK S + + +
Sbjct: 1680 WSTMFAMAVWWGWKWRCSNIFGENKTCRDRV---------RFIKDLAVEVSIA---YSRE 1727
Query: 766 FGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGMGGIGGVVRDATGEIRGFFSM 825
G RV + + WT P EG K N DGA+RG PG+ GGV+R++ G G F++
Sbjct: 1728 VELRLSGLRVNKPIR--WTPPMEGWYKINTDGASRGNPGLASAGGVLRNSAGAWCGGFAV 1785
Query: 826 SLGVVFAYEAEVKAIRTALEFSKEFGLSRVVVESDSTLAVGWVSKRANRPWKLLNDLHMI 885
++G A AE+ + L + L+ + +E DS + VG++ L + +
Sbjct: 1786 NIGRCSAPLAELWGVYYGLYMAWAKQLTHLELEVDSEVVVGFLKTGIGETHPLSFLVRLC 1845
Query: 886 DILRNEVECLRIYHVFREINCQPDFLA 912
++ +RI HV+RE N D LA
Sbjct: 1846 HNFLSKDWTVRISHVYREANSLADGLA 1872
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 317 bits (813), Expect = 1e-86
Identities = 226/752 (30%), Positives = 362/752 (48%), Gaps = 62/752 (8%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG FF++ W +IK +++ + F + G K LN I LIPK + P +T+ R
Sbjct: 230 PGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELR 289
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTML--SS 118
ISL YK+++K+L RL+ V+P L+SE Q +F GR I++ +LI E+ + SS
Sbjct: 290 PISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSS 349
Query: 119 GRGGFL-LKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+ F+ +K D +KAYD +EW+F+ ++ +GF +W WI C++T VL+NG P
Sbjct: 350 CKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKG 409
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGV-VLGPGVCLNHLQFADDT 236
E+GLRQGDPLSP LF LC + L + + G+ V P ++HL FADD+
Sbjct: 410 LIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDS 469
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGTL 296
L FC Q + +++ + SG ++N++KS + + + + ++ +++G
Sbjct: 470 LFFCKANKEQCGIILEILKQYESVSGQQINFSKSSI---QFGHKVEDSIKADIKLILGIH 526
Query: 297 PLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*----GSNSVSLSGRLVVLRSVASAIPI 352
L +GS LG G V VR L S + +S G+ V+++SVA+ +P
Sbjct: 527 NLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPR 586
Query: 353 YHMAVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRN 412
Y M+ ++ P + + + + F W +G R + W+AW+++C K GGLG + N
Sbjct: 587 YVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFN 646
Query: 413 KAMLLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLED 472
A+L K WR P++L+ +V +Y S PL + + R M ++V +
Sbjct: 647 SALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSP-SYGWRSMISARSLVYKG 705
Query: 473 SVLGKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASN-QDIMVSEAGVFS 531
+ VG G IS W DPW+ ++ +PR + D + +
Sbjct: 706 LIKR----------VGSGASISVWNDPWIPAQ-----FPRPAKYGGSIVDPSLKVKSLID 750
Query: 532 NLGWEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKTFCMEV 591
+ WN+ + F E+ + N P+ E D+L W G YTVK+
Sbjct: 751 SRSNFWNIDLLKELFDPEDVPLISALPIGN---PNME-DTLGWHFTKAGNYTVKSGYHTA 806
Query: 592 ELQL------YGPPSWVVPSCVKKL-APQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEA 644
L L GP + + + K+ P K+ FLWQ V V NL RG+L D
Sbjct: 807 RLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKG- 865
Query: 645 VCVLCGQAEESVTHLILVCKFAWVLW--SKVLLREGVVWCVPASILSLLKEWDSLRKGSD 702
CV CG +EES+ H + C A +W S++ G+ P+ +S+ D
Sbjct: 866 -CVSCGASEESINHTLFQCHPARQIWALSQIPTAPGI---FPS---------NSIFTNLD 912
Query: 703 LVLWRL------IPYA-LAWSVWMARNGLIFK 727
+ WR+ PY + W +W ARN +F+
Sbjct: 913 HLFWRIPSGVDSAPYPWIIWYIWKARNEKVFE 944
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 317 bits (811), Expect = 3e-86
Identities = 269/951 (28%), Positives = 444/951 (46%), Gaps = 88/951 (9%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG F++ W ++ +++ ++F+E + +N I +IPK P ++DYR
Sbjct: 602 PGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYR 661
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
I+L +YK+++K L RL+ + ++S++Q +F GR I + ++I +EV+ ++ R
Sbjct: 662 PIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKR 721
Query: 121 GG---FLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EWDFL M GF +W WI + V + +VL+NGSP
Sbjct: 722 VSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHG 781
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGV-CLNHLQFADDT 236
+ +G+RQGDPLSP LF LC LS + N A GV +G G + HLQFADD+
Sbjct: 782 YITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDS 841
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L FC + L DV + + SG K+N KS + G V + ++L L +
Sbjct: 842 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQG 901
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG +++ + +I++V+ ++ + +S +G+ ++L+SVA A+P+Y M
Sbjct: 902 GGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAM 961
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K P G+V++IE L+ F W ++ R I WVAW+++ K+ GGLG L N A+
Sbjct: 962 SCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDAL 1021
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K AWR Q P +L+ RV+ A+Y + ++ +V + + + D + ++L
Sbjct: 1022 LAKQAWRLIQYPNSLFARVMKARY-FKDVSILDAKVRKQQSYGWASLLDGI------ALL 1074
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGW 535
K R ++GDG I D V S PR N + E + +NL
Sbjct: 1075 KKGTRH----LIGDGQNIRIGLDNIVDSHP-----PR----PLNTEETYKEMTI-NNL-- 1118
Query: 536 EWNLGFRRR--FFGWEEQVYDELIARCNG-------VVPSREKDSLIWLGDTNGRYTVK- 585
F R+ ++ W++ + + + + + S++ D +IW +T G YTV+
Sbjct: 1119 -----FERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRS 1173
Query: 586 -----TFCMEVELQLYGPPS---------WVVPSCVKKLAPQKVVLFLWQAAENRVAVMV 631
T + PP W +P + P K+ FLW+A +A
Sbjct: 1174 GYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLP-----IMP-KLKHFLWRALSQALATTE 1227
Query: 632 NLHNRGVLVDAEAVCVLCGQAEESVTHLILVCKF---AWVLWSKVLLREGVVWCVPASIL 688
L RG+ +D +C C + ES+ H + C F AW L L+R ++ +
Sbjct: 1228 RLTTRGMRID--PICPRCHRENESINHALFTCPFATMAWWLSDSSLIRNQLMSNDFEENI 1285
Query: 689 SLLKEWDSLRKGSDLVLWRLIPYALAWSVWMARNGLIF-KGEEVSVETVWDIHITRMYWW 747
S + + SD +L+P L W +W ARN ++F K E +TV + W
Sbjct: 1286 SNILNFVQDTTMSD--FHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAK-AETHDW 1342
Query: 748 IKAGKPHCSFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGMGG 807
+ A + H + ++E W PP +K N D A +
Sbjct: 1343 LNATQSHKK------TPSPTRQIAENKIE------WRNPPATYVKCNFD-AGFDVQKLEA 1389
Query: 808 IGG-VVRDATGEIRGFFSMSLG-VVFAYEAEVKAIRTALEFSKEFGLSRVVVESDSTLAV 865
GG ++R+ G + SM L EAE KA+ AL+ + G ++V +E D +
Sbjct: 1390 TGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLI 1449
Query: 866 GWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREINCQPDFLAKTGC 916
++ + L N L I N+ ++ + R+ N LAK GC
Sbjct: 1450 NLINGISFHS-SLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGC 1499
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 314 bits (805), Expect = 1e-85
Identities = 268/951 (28%), Positives = 443/951 (46%), Gaps = 88/951 (9%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG F++ W ++ +++ ++F+E + +N I +IPK P ++DYR
Sbjct: 828 PGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYR 887
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
I+L +YK+++K L RL+ + ++S++Q +F GR I + ++I +EV+ ++ R
Sbjct: 888 PIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKR 947
Query: 121 GG---FLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EWDFL M GF +W WI + V + +VL+NGSP
Sbjct: 948 VSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHG 1007
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGV-CLNHLQFADDT 236
+ +G+RQGDPLSP LF LC LS + N A GV +G G + HLQFADD+
Sbjct: 1008 YITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDS 1067
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L FC + L DV + + SG K+N KS + G V + ++L L +
Sbjct: 1068 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQG 1127
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG +++ + +I++V+ ++ + +S +G+ ++L+SVA A+P+Y M
Sbjct: 1128 GGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAM 1187
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K P G+V++IE L+ F W ++ R I WVAW+++ K+ GGLG L N A+
Sbjct: 1188 SCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDAL 1247
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K AWR Q P +L+ RV+ A+Y + ++ +V + + + D + ++L
Sbjct: 1248 LAKQAWRLIQYPNSLFARVMKARY-FKDVSILDAKVRKQQSYGWASLLDGI------ALL 1300
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGW 535
K R ++GDG I D V S PR N + E + +NL
Sbjct: 1301 KKGTRH----LIGDGQNIRIGLDNIVDSHP-----PR----PLNTEETYKEMTI-NNL-- 1344
Query: 536 EWNLGFRRR--FFGWEEQVYDELIARCNG-------VVPSREKDSLIWLGDTNGRYTVK- 585
F R+ ++ W++ + + + + + S++ D +IW +T G YTV+
Sbjct: 1345 -----FERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRS 1399
Query: 586 -----TFCMEVELQLYGPPS---------WVVPSCVKKLAPQKVVLFLWQAAENRVAVMV 631
T + PP W +P + P K+ FLW+A +A
Sbjct: 1400 GYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLP-----IMP-KLKHFLWRALSQALATTE 1453
Query: 632 NLHNRGVLVDAEAVCVLCGQAEESVTHLILVCKF---AWVLWSKVLLREGVVWCVPASIL 688
L RG+ +D C C + ES+ H + C F AW L L+R ++ +
Sbjct: 1454 RLTTRGMRIDPS--CPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENI 1511
Query: 689 SLLKEWDSLRKGSDLVLWRLIPYALAWSVWMARNGLIF-KGEEVSVETVWDIHITRMYWW 747
S + + SD +L+P L W +W ARN ++F K E +TV + W
Sbjct: 1512 SNILNFVQDTTMSD--FHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAK-AETHDW 1568
Query: 748 IKAGKPHCSFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGMGG 807
+ A + H + ++E W PP +K N D A +
Sbjct: 1569 LNATQSHKK------TPSPTRQIAENKIE------WRNPPATYVKCNFD-AGFDVQKLEA 1615
Query: 808 IGG-VVRDATGEIRGFFSMSLG-VVFAYEAEVKAIRTALEFSKEFGLSRVVVESDSTLAV 865
GG ++R+ G + SM L EAE KA+ AL+ + G ++V +E D +
Sbjct: 1616 TGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLI 1675
Query: 866 GWVSKRANRPWKLLNDLHMIDILRNEVECLRIYHVFREINCQPDFLAKTGC 916
++ + L N L I N+ ++ + ++ N LAK GC
Sbjct: 1676 NLINGISFHS-SLANHLEDISFWANKFASIQFGFIRKKGNKLAHVLAKYGC 1725
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 312 bits (799), Expect = 6e-85
Identities = 219/707 (30%), Positives = 350/707 (48%), Gaps = 41/707 (5%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF F+ +WH+I ++ + F+ + +N I LIPK P V DYR
Sbjct: 341 PGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYR 400
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSG- 119
I+L YK++AK++ R+Q ++P L+SENQ +F GR I++ +LI +EV+ + +S
Sbjct: 401 PIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLHFLRTSSA 460
Query: 120 --RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EWDFL +++ GF W W+ CV++ + + L+NG+P
Sbjct: 461 KKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQG 520
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRL-AIRERPCGVVLGPGVCLNHLQFADDT 236
+GLRQGDPLSP LF LC + LS + R +R+ P V G +NHL FADDT
Sbjct: 521 KVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDT 580
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
+ F + +L ++++ + SG +N+ KS + ++ Q+ L +
Sbjct: 581 MFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEG 640
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG R+R + +I+K+R S S +S +G+ V+L++V +++P+Y M
Sbjct: 641 GTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSM 700
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K P + I+ L+ F W R+ +WVAW ++ K GGLG ++ N ++
Sbjct: 701 SCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDIERCNDSL 760
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K WR PE+L R+L KY +S + PS+ +++ +L
Sbjct: 761 LAKLGWRLLNSPESLLSRILLGKYCHSS-------SFMECKLPSQPSHGWRSIIAGREIL 813
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVA-SKTLAVLYPRFYAMASNQDIMVSEAGVFSNLG 534
++ ++ +G ++S W DPW++ SK L + P A+ +QD+ VS + L
Sbjct: 814 ----KEGLGWLITNGEKVSIWNDPWLSISKPLVPIGP---ALREHQDLRVSALINQNTLQ 866
Query: 535 WEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKTFCMEVELQ 594
W+WN Y+ LI + SR D L WL +G+YT ++ +
Sbjct: 867 WDWNK------IAVILPNYENLIKQL-PAPSSRGVDKLAWLPVKSGQYTSRSGYGIASVA 919
Query: 595 LYGPP----SWVVPSCVKKLAPQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEAVCVLCG 650
P +W + P K+ +W+AA + V + L R + A C CG
Sbjct: 920 SIPIPQTQFNWQSNLWKLQTLP-KIKHLMWKAAMEALPVGIQLVRRH--ISPSAACHRCG 976
Query: 651 QAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPAS----ILSLLKE 693
A ES THL C+FA +W L+E V P S LSLLK+
Sbjct: 977 -APESTTHLFFHCEFAAQVWELAPLQETTV--PPGSSMLDALSLLKK 1020
>At3g45550 putative protein
Length = 851
Score = 298 bits (764), Expect = 7e-81
Identities = 221/752 (29%), Positives = 369/752 (48%), Gaps = 58/752 (7%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG F+++ W ++ ++++ + F+E + +N I +IPK Q P+ ++DYR
Sbjct: 67 PGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYR 126
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
I+L +YK+++K + RL+ + ++S++Q +F GR I + ++I +E++ ++ R
Sbjct: 127 PIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKR 186
Query: 121 GG---FLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EWDFL M GF +W WI + V + +VL+NGSP
Sbjct: 187 VSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHG 246
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGV-CLNHLQFADDT 236
+ +G+RQGDPLSP LF LC LS + A GV +G G + HLQFADD+
Sbjct: 247 YISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGNGAPAITHLQFADDS 306
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L FC + L DV + + SG K+N KS + G V + +L L +
Sbjct: 307 LFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQG 366
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG +++ + +I++V+ AS + +S +G+ ++L+SVA A+P+Y M
Sbjct: 367 GGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAM 426
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K P G+V++IE L+ F W ++ R I WVAW+++ K+ GGLG L N A+
Sbjct: 427 SCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDAL 486
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K AWR Q P +L+ RV+ A+Y ++ + + S+ + +++ ++L
Sbjct: 487 LAKQAWRIIQYPNSLFARVMKARYFKDNSII-------DAKTRSQQSYGWSSLLSGIALL 539
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGW 535
K R V+GDG I D V S +P + Q +S +F + G
Sbjct: 540 RKGTR----YVIGDGKTIRLGIDNVVDS------HPPRPLLTDEQHNGLSLDNLFQHRGH 589
Query: 536 E--WNLGFRRRFFGWEEQVYDELIARCNGVVPSREK-DSLIWLGDTNGRYTVKT-FCMEV 591
W+ + F + Y + I + +R K D LIW ++ G YTV++ + +
Sbjct: 590 SRCWDNAKLQTFVDQSDHDYIKRI-----YLSTRSKTDRLIWSYNSTGDYTVRSGYWLST 644
Query: 592 ELQLYGPPSWVVPSCVKKLAP-------------QKVVLFLWQAAENRVAVMVNLHNRGV 638
PS +P+ K K+ FLW+ + L RG+
Sbjct: 645 H-----DPSNTIPTMAKPHGSVDLKTKIWNLPIMPKLKHFLWRILSKALPTTDRLTTRGM 699
Query: 639 LVDAEAVCVLCGQAEESVTHLILVCKFAWVLW---SKVLLREGVVWC-VPASILSLLKEW 694
+D C C + ES+ H + C FA + W L R ++ + +I ++L
Sbjct: 700 RIDPG--CPRCRRENESINHALFTCPFATMAWRLSDTPLYRSSILSNNIEDNISNILL-- 755
Query: 695 DSLRKGSDLVLWRLIPYALAWSVWMARNGLIF 726
L+ + +LIP+ L W +W ARN ++F
Sbjct: 756 -LLQNTTITDSQKLIPFWLLWRIWKARNNVVF 786
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 298 bits (762), Expect = 1e-80
Identities = 237/881 (26%), Positives = 403/881 (44%), Gaps = 76/881 (8%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF FF+ W L+K +I+ E F++ G L + N + LIPK P + D R
Sbjct: 175 PGPDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIR 234
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSS-- 118
ISL +YK+++K+L+ARL+ +P ++S Q +F R +++ +++ +E+V + ++
Sbjct: 235 PISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEK 294
Query: 119 -GRGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+ + K D +KAYD +EW FL ++ LGF W W+ +CVS+ + +VL+NG P
Sbjct: 295 ISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSVLINGQPFG 354
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVL-GPGVCLNHLQFADDT 236
+GLRQGDPLSP LF LC + L + N+ + G+ G G +NHL FADDT
Sbjct: 355 HITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEKIGKISGIQFNGTGPSVNHLLFADDT 414
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L+ C + E+ ++ + SG +N KS + G V+ + G+
Sbjct: 415 LLICKASQLECAEIMHCLSQYGHISGQMINSEKSAITFGAKVNEETKQWIMNRSGIQTEG 474
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG ++ + + EK++ L+ + ++S G+ ++L+S+A A P+Y M
Sbjct: 475 GTGKYLGLPECFQGSKQVLFGFIKEKLQSRLSGWYAKTLSQGGKDILLKSIAMAFPVYAM 534
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
++ + + +M F W ++I W+ +++ K +GG G + L+ N+A+
Sbjct: 535 TCFRLSKTLCTKLTSVMMDFWWNSVQDKKKIHWIGAQKLMLPKFLGGFGFKDLQCFNQAL 594
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K A R + ++L ++L ++Y +NS L +G R + + L S L
Sbjct: 595 LAKQASRLHTDSDSLLSQILKSRYYMNSDFL---SATKGTRPSYAWQSILYGRELLVSGL 651
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGW 535
K ++G+G W D W+ R ++ DI + + +
Sbjct: 652 KK--------IIGNGENTYVWMDNWIFDDKPR----RPESLQIMVDIQLKVSQLIDPFSR 699
Query: 536 EWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKT---FC-MEV 591
WNL R F W+ E+ C + +DS W G +G YTVK+ C +V
Sbjct: 700 NWNLNMLRDLFPWK-----EIQIICQQRPMASRQDSFCWFGTNHGLYTVKSEYDLCSRQV 754
Query: 592 ELQLY----GPPS--------WVVPSCVKKLAPQKVVLFLWQAAENRVAVMVNLHNRGVL 639
Q++ PS W + S AP K+ +FLW+ + VAV L RGVL
Sbjct: 755 HKQMFKEAEEQPSLNPLFGKIWNLNS-----AP-KIKVFLWKVLKGAVAVEDRLRTRGVL 808
Query: 640 VDAEAVCVLCGQAEESVTHLILVCKFAWVLWSKVLLR---EGVVWCVPASILSLLKEWDS 696
+ E C +C + E++ H++ C A +W+ ++ G + ++ ++ +
Sbjct: 809 I--EDGCSMCPEKNETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNVNHVIGNCHN 866
Query: 697 LRKGSDLVLWRLIPYALAWSVWMARNGLIFKG-EEVSVETVWDIHITRMYWWIKAGKPHC 755
L R + + W +W RN +F+G VS+ V + W+KA + C
Sbjct: 867 TELSPHL---RYVSPWIIWILWKNRNKRLFEGIGSVSLSIVGKA-LEDCKEWLKAHELIC 922
Query: 756 SFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGILKWNVDGAARGAPGMGGIGGVVRDA 815
S E + W P LK N+ A M G+ VVR+
Sbjct: 923 S------------------KEPTKDLTWIPPLMNELKCNIGIAWSKKHQMAGVSWVVRNW 964
Query: 816 TGEIRGFFSMSLGVVFA-YEAEVKAIRTALEFSKEFGLSRV 855
G + S + + ++A++K A+E +F RV
Sbjct: 965 KGRVLLHSRCSFSQISSHFDAKIKGWNYAVESMDQFKFDRV 1005
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 298 bits (762), Expect = 1e-80
Identities = 256/935 (27%), Positives = 418/935 (44%), Gaps = 78/935 (8%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PG DGF F+ W LI ++ M F+E + +N I LIPK P+ ++DYR
Sbjct: 808 PGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYR 867
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
ISL + YK+++K+L RL+ + ++S++Q +F G+ I++ +L+ +E++ ++ S
Sbjct: 868 PISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRE 927
Query: 121 ---GGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
G +K D +KAYD +EW+FL +M LGF PRW WI +CV++ + VL+NGSP
Sbjct: 928 CQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYG 987
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGV-VLGPGVCLNHLQFADDT 236
+G+RQGDPLSP LF C + LS M + + ++ G+ + + ++HL FADD+
Sbjct: 988 KIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDS 1047
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L FC +E+L + + SG K+NYAKS ++ G + + +L LG+
Sbjct: 1048 LFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVR 1107
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG R+ + ++ KV+ N +S +G+ +V++++A A+P+Y M
Sbjct: 1108 GGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSM 1167
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ P + +I L+ F WG ++ G LG + L N+A+
Sbjct: 1168 NCFLLPTLICNEINSLITAFWWG------------------KENEGDLGFKDLHQFNRAL 1209
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
L K AWR P++L R+ Y N+ L R +G H S Y ++ +
Sbjct: 1210 LAKQAWRILTNPQSLLARLYKGLYYPNTTYL---RANKG-GHAS-YGWNSIQE------- 1257
Query: 476 GKTFRDQCFCV-VGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLG 534
GK Q V +GDG W DPW L L PR A D + A ++
Sbjct: 1258 GKLLLQQGLRVRLGDGQTTKIWEDPW-----LPTLPPR-PARGPILDEDMKVADLWRENK 1311
Query: 535 WEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVK------TFC 588
EW+ E+Q + + N +DS W N +YTV+ T
Sbjct: 1312 REWDPVIFEGVLNPEDQQLAKSLYLSNYAA----RDSYKWAYTRNTQYTVRSGYWVATHV 1367
Query: 589 MEVELQLYGPPSWVVPSCVK----KLAPQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEA 644
E ++ P VP + K+ P K+ F+W+ ++ L NR + A+
Sbjct: 1368 NLTEEEIINPLEGDVPLKQEIWRLKITP-KIKHFIWRCLSGALSTTTQLRNRN--IPADP 1424
Query: 645 VCVLCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSLRKGSDL- 703
C C A+E++ H+I C +A V+W C ++ ++ +K +L
Sbjct: 1425 TCQRCCNADETINHIIFTCSYAQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLP 1484
Query: 704 VLWRLIPYALAWSVWMARNGLIFKGEEVSVETVWDIHITRMYWWIKAGKPHCSFSLCDFL 763
+L L+P+ + W +W +RN +F+ + R W + + + +
Sbjct: 1485 ILNGLMPFWIMWRLWKSRNEYLFQ------------QLDRFPWKVAQKAEQEATEWVETM 1532
Query: 764 QNFGAVT--VGQRVER--CRQDVWTCPPEGILKWNVDGAARGAPGMGGIGGVVRDATGEI 819
N A++ Q +R R W+ PPEG LK N D G ++RD G +
Sbjct: 1533 VNDTAISHNTAQSNDRPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRV 1592
Query: 820 RGFFSMSLGVVF-AYEAEVKAIRTALEFSKEFGLSRVVVESDSTLAVGWVSKRANRPWKL 878
L + A +AE AL+ G V E D+ ++K + L
Sbjct: 1593 LHSGCAKLQQSYSALQAEALGFLHALQMVWIRGYCYVWFEGDNLELTNLINKTEDH-HLL 1651
Query: 879 LNDLHMIDILRNEVECLRIYHVFREINCQPDFLAK 913
L+ I ++ I +V RE N D L K
Sbjct: 1652 ETLLYDIRFWMTKLPFSSIGYVNRERNLAADKLTK 1686
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 280 bits (717), Expect = 2e-75
Identities = 221/851 (25%), Positives = 400/851 (46%), Gaps = 60/851 (7%)
Query: 29 FYEGGKLVKGLNAGFIALIPKRQTPEMVTDYRLISLIGSIYKLLAKVLAARLQGVMPYLL 88
F+E G L + N + LIPK P+ ++D R ISL +YK+++K+L+ +L+ +P ++
Sbjct: 426 FFETGVLPQEWNHTHLYLIPKFTNPQRMSDIRPISLCSVLYKIISKILSFKLKKHLPSIV 485
Query: 89 SENQFSFTKGRQIANCLLIGNEVVDTMLSSGRGG---FLLKLDFAKAYDNIEWDFLMNMM 145
S +Q +F R I++ +LI +E+V ++ ++ + + K D +KAYD +EW FL ++
Sbjct: 486 SPSQSAFFAERLISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEIL 545
Query: 146 EDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFFEIEKGLRQGDPLSPLLFNLCVQGLSV 205
LGF +W WI CV++ T +VL+NG E+G+RQGDP+SP LF LC + L
Sbjct: 546 VALGFNDKWISWIMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISPFLFVLCTEALIH 605
Query: 206 MWNRLAIRERPCGVVL-GPGVCLNHLQFADDTLVFCDPECAQMEELFDVMTAFLWGSGLK 264
+ + ++ G+ G G +NHL F DDT + C + E++ ++ + SG
Sbjct: 606 ILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISGQL 665
Query: 265 LNYAKSELV-GCNVDSAIVNQLAVELGVVVGTLPLPYLGSVLGGDPRRRGFWAPVIEKVR 323
+N KS + G VD + G+ + YLG ++ + + EK++
Sbjct: 666 INVEKSSITFGVKVDEDTKRWIKNRSGIHLEGGTGKYLGLPENLSGSKQDLFGYIKEKLQ 725
Query: 324 VALAS*GSNSVSLSGRLVVLRSVASAIPIYHMAVYKAPLGVVADIEKLMRCFLWGRSGGG 383
L+ ++S G+ ++L+S+A A+P+Y M ++ P G+ + +M F W
Sbjct: 726 SHLSGWYDKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFS 785
Query: 384 RRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAMLLKWAWRFGQEPEALWRRVLCAKYGLNS 443
+I W+ +++ K +GG G + L+ N+A+L K AWR + +++ ++ ++Y +N+
Sbjct: 786 NKIHWIGGKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNT 845
Query: 444 IPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVLGKTFRDQCFCVVGDGLRISFWRDPWVAS 503
L R +R + +++ +L + ++G+G + + W D W+
Sbjct: 846 DFL-------NARQGTRPSYTWRSILYGRELLNGGLKR----LIGNGEQTNVWIDKWLFD 894
Query: 504 KTLAVLYPRFYAMASNQDIMVSEAGVFSNLGWEWNLGFRRRFFGWEEQVYDELIARCNGV 563
R + S +I + + + L WNL F E+ V +LI +
Sbjct: 895 GHSR----RPMNLHSLMNIHMKVSHLIDPLTRNWNLKKLTELF-HEKDV--QLIMHQRPL 947
Query: 564 VPSREKDSLIWLGDTNGRYTVK---------TF-CMEVELQLYGPPSWVVPSCVKKLAPQ 613
+ S +DS W G NG YTVK TF + E +Y + +
Sbjct: 948 ISS--EDSYCWAGTNNGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVP 1005
Query: 614 KVVLFLWQAAENRVAVMVNLHNRGVLVDAEAVCVLCGQAEESVTHLILVCKFAWVLWSKV 673
K+ +F+W+A + +AV L +RG+ A+ C+ C + E++ HL+ C FA +W+
Sbjct: 1006 KIKVFMWKALKGALAVEDRLRSRGIRT-ADG-CLFCKEEIETINHLLFQCPFARQVWALS 1063
Query: 674 LLREGVVWCVPASILSLLKE--WDSLRKGSDLVLWRLIPYALAWSVWMARNGLIFKGEEV 731
L++ SI S + +S G + + P+ L W +W RN +F+G +
Sbjct: 1064 LIQAPATG-FGTSIFSNINHVIQNSQNFGIPRHMRTVSPW-LLWEIWKNRNKTLFQGTGL 1121
Query: 732 SVETVWDIHITRMYWWIKAGKPHCSFSLCDFLQNFGAVTVGQRVERCRQDVWTCPPEGIL 791
+ + WI A + ++ G V+ + W PP G L
Sbjct: 1122 TSSEIVAKAYEECNLWINAQE-----------KSSGGVSPSEH-------KWNPPPAGEL 1163
Query: 792 KWNVDGAARGAPGMGGIGGVVRDATGEIRGFFSMSLGVVFA-YEAEVKAIRTALEFSKEF 850
K N+ A + G+ V+RD+ G++ S V++ ++A++K+ ALE F
Sbjct: 1164 KCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSYSQVYSLFDAKIKSWDWALESMDHF 1223
Query: 851 GLSRVVVESDS 861
+V + S
Sbjct: 1224 HFDKVTFAATS 1234
>At1g47850 hypothetical protein
Length = 799
Score = 278 bits (711), Expect = 1e-74
Identities = 216/747 (28%), Positives = 340/747 (44%), Gaps = 67/747 (8%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG+ FF+ W + ++ + + F+ G L KGLNA +ALIPK+ ++ DYR
Sbjct: 44 PGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYR 103
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV-DTMLSSG 119
IS IYK+++K++A RL+ ++P + +NQ +F + R + +L+ E+V D S
Sbjct: 104 PISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSI 163
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
+K+D +KA+D+++W FL+N +E L F + WI C+STAT +V VNG FF
Sbjct: 164 SPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFF 223
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGVCLNHLQFADDTLVF 239
++GLRQG LSP LF +C+ LS M + A+ + L HL FADD +VF
Sbjct: 224 GSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVF 283
Query: 240 CDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGTLPLP 299
D + +E + ++ F SGL ++ KS L V N + G LP+
Sbjct: 284 IDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVR 343
Query: 300 YLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHMAVYK 359
YLG L ++P+++KVR ++S + S+S +GRL ++ SV ++ + M+ Y+
Sbjct: 344 YLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYR 403
Query: 360 APLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAMLLKW 419
P G + +IEKL FLW + A + W +CK K+ GGLG++ L NK LK
Sbjct: 404 LPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKL 463
Query: 420 AWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVLGK-- 477
WR +LW +N + + R + F N + S LG
Sbjct: 464 IWRLVSRQSSLW---------VNWVWTYIIR---------KGSFWSAN---DRSSLGSWM 502
Query: 478 -----TFRD----QCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAG 528
+RD C + G SFW D W L + + + + A
Sbjct: 503 WKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATVAT 562
Query: 529 VFSNLGWEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSL--IWLGDTNGRYTVKT 586
V ++ R +Y+++ A ++ RE+ I+L ++G ++
Sbjct: 563 VLAS----------HRTKHHRTAIYNKIEAEIQSIL-QRERSGAPDIFLWRSSGDNFRQS 611
Query: 587 FCMEVELQ----LYGPPSWVVPSCVKKLAPQKVVLFLWQAAENRVAV--MVNLHNRGVLV 640
F +V ++ W P K LW A +R++ + N G V
Sbjct: 612 FITKVTWHNIRVIHTHRQWYKGVWFSYNTP-KYSFLLWLAIHDRLSTGDRIKKWNSGQQV 670
Query: 641 DAEAVCVLCGQAEESVTHLILVCKFAWVLWSKVLLR-----EGVVWCVPASILSLLKEWD 695
+ CVLCG EES HL C + +W + R W +L+LL
Sbjct: 671 N----CVLCGNVEESRNHLFFSCHYTTAIWDNLTRRLLSHEYSTDW---DRLLALL--CS 721
Query: 696 SLRKGSDLVLWRLIPYALAWSVWMARN 722
S L L+R + A + VW RN
Sbjct: 722 STMSKDSLFLFRYVFQASLYHVWRERN 748
>At1g31030 F17F8.5
Length = 872
Score = 278 bits (710), Expect = 1e-74
Identities = 212/738 (28%), Positives = 348/738 (46%), Gaps = 46/738 (6%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG+ F++ W +I +E + F++ G L KG+N+ +ALIPK+ + + DYR
Sbjct: 118 PGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYR 177
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV-DTMLSSG 119
IS +YK+++K++A RL+ ++P ++ENQ +F K R + LL+ E+V D S
Sbjct: 178 PISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSI 237
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
+K+D +KA+D+++W FL N + + F P + WI+ C++TA+ +V VNG +F
Sbjct: 238 SARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYF 297
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLA-IRE---RPCGVVLGPGVCLNHLQFADD 235
+ ++GLRQG LSP LF +C+ LS M ++ A +R+ P LG L HL FADD
Sbjct: 298 QSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLG----LTHLSFADD 353
Query: 236 TLVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGT 295
+V D + +E + +V F SGL+++ KS L V I ++A + VG
Sbjct: 354 LMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQ 413
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
LP+ YLG L ++P++E+++ +A+ S +GR +++SV +I + +
Sbjct: 414 LPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWL 473
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
A ++ P + +I+KL FLW S A ++W+ VCK K GGLG+ LK N
Sbjct: 474 AAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVS 533
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
LK WR +LW + + A+Y L+ + + L+ + I +L+ +
Sbjct: 534 CLKLVWRIISNSNSLWTKWV-AEY------LIRKKSIWSLKQSTSMGSWIWRKILKIRDV 586
Query: 476 GKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAGVFSNLGW 535
K+F VG+G SFW D W A + R ++ + +++
Sbjct: 587 AKSFSR---VEVGNGESASFWYDHWSA-------HGRLIDTVGDKGTIDLGIPREASVAD 636
Query: 536 EWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLG--DTNGRYTVKTFCMEVEL 593
W RRR +E++A + S +D+++W G D + +
Sbjct: 637 AWTRRSRRRHRTSLLNEIEEMMA-YQRIHHSDAEDTVLWRGKNDVFKPHFSTRDTWHLIK 695
Query: 594 QLYGPPSWVVPSCVKKLAPQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEAVCVLCGQAE 653
SW + P K L W A NR+ + CVLC
Sbjct: 696 ATSSTVSWHKGVWFRHATP-KYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCTNNS 754
Query: 654 ESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSL--------RKGSDLVL 705
+++ HL C +A +W+ L +G +W S W L + + L
Sbjct: 755 KTLEHLFFSCSYASTVWA--ALAKG-IWKTRYS-----TRWSHLLTHISTHFQDRVEGFL 806
Query: 706 WRLIPYALAWSVWMARNG 723
R I A + VW RNG
Sbjct: 807 TRYIFQATIYHVWRERNG 824
>At1g25430 hypothetical protein
Length = 1213
Score = 271 bits (694), Expect = 9e-73
Identities = 210/741 (28%), Positives = 333/741 (44%), Gaps = 51/741 (6%)
Query: 2 GPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYRL 61
GPDGF FF + W ++ E+ +EF+ G L+K NA I LIPK P +D+R
Sbjct: 466 GPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRP 525
Query: 62 ISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV---DTMLSS 118
IS + ++YK++A++L RLQ ++ ++S Q +F GR +A +L+ ++V + S
Sbjct: 526 ISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNIS 585
Query: 119 GRGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEF 178
RG +LK+D KA+D++ W+F++ + L ++ WI C+ST T V +NG F
Sbjct: 586 PRG--MLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGF 643
Query: 179 FEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGP---GVCLNHLQFADD 235
F+ KGLRQGDPLSP LF L ++ S N L R + P + ++HL FADD
Sbjct: 644 FKSTKGLRQGDPLSPYLFVLAMEAFS---NLLHSRYESGLIHYHPKASNLSISHLMFADD 700
Query: 236 TLVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGT 295
++F D + + + + F SGLK+N KS L ++ N A G +GT
Sbjct: 701 VMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANAA-YGFPIGT 759
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
LP+ YLG L R + P++EK+ S + +S +GR+ ++ SV + M
Sbjct: 760 LPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWM 819
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ + P G + IE L FLW + + V+W +C K GGLG+ L NK +
Sbjct: 820 STFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTL 879
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSVL 475
++ WR ++LW + L H SR F V DS
Sbjct: 880 SMRLIWRLFVAKDSLWAD------------------WQHLHHLSRGSFWAVEGGQSDSWT 921
Query: 476 GKTF-------RDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMVSEAG 528
K C VG+GL+ +W D W + L + + ++ A
Sbjct: 922 WKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVAS 981
Query: 529 VFSNLGWEWNLGFRRRFFGWEEQVYDELIARCNGVVPSREKDSLIWLGDTNGRYTVKTFC 588
FS GW + G ++D L C VPS ++ + + + + F
Sbjct: 982 AFSEDGWRLPVSRSAPAKG----IHDHL---CTVPVPSTAQEDVDRYEWSVNGFLCQGFS 1034
Query: 589 MEVELQLYGP----PSWVVPSCVKKLAPQKVVLFLWQAAENRVAVMVNLHNRGVLVDAEA 644
+ P SW K P K +W + NR+ L + G +
Sbjct: 1035 AAKTWEAIRPKATVKSWASSIWFKGAVP-KYAFNMWVSHLNRLLTRQRLASWGHI--QSD 1091
Query: 645 VCVLCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKEWDSLRKGSDLV 704
CVLC A ES HL+L+C+F+ +W V R + +S LL + +
Sbjct: 1092 ACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWVRQSSPEAPPL 1151
Query: 705 LWRLIPYALAWSVWMARNGLI 725
L +++ + +++W RN L+
Sbjct: 1152 LRKIVSQVVVYNLWRQRNNLL 1172
>At2g28980 putative non-LTR retroelement reverse transcriptase
Length = 1529
Score = 267 bits (683), Expect = 2e-71
Identities = 214/757 (28%), Positives = 328/757 (43%), Gaps = 87/757 (11%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG+ FF+ W L + + + F+ G L KGLNA +ALIPK+ + DYR
Sbjct: 768 PGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYR 827
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV-DTMLSSG 119
IS +YK+++K+LA RL+ ++P + +NQ +F K R + +L+ E+V D S
Sbjct: 828 PISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESV 887
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
+K+D +KA+D+++W FL+N +E L F +R WI C+STAT +V VNG FF
Sbjct: 888 TPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFF 947
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGVCLNHLQFADDTLVF 239
+GLRQG LSP LF +C+ LS M + A+ + L HL FADD +VF
Sbjct: 948 GSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVF 1007
Query: 240 CDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGTLPLP 299
D +E + +V F SGL+++ KS + V ++ Q G LP+
Sbjct: 1008 VDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVR 1067
Query: 300 YLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHMAVYK 359
YLG L ++P+IE V+ ++S + S+S +GRL +L SV +I + M+ Y+
Sbjct: 1068 YLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYR 1127
Query: 360 APLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAMLLK- 418
P G + +IEKL FLW + A +AW +C+ K+ GGLG++ L NK LK
Sbjct: 1128 LPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKL 1187
Query: 419 --------------WAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFD 464
W W F W + +S+ + + L R ++ M
Sbjct: 1188 IWRLLSTQPSLWVTWIWTFIIRKGTFW-----SANERSSLGSWMWKKLLKYRELAKSMHK 1242
Query: 465 IVNVVLEDSVLGKTFRDQCFCVVGDGLRISFWRDPWVASKTLAVLYPRFYAMASNQDIMV 524
+ V +G SFW D W L DI
Sbjct: 1243 VE--------------------VRNGSSTSFWYDHWSHLGRLL-------------DITG 1269
Query: 525 SEAGVFSNLGWEWNLGFRRRFFGWEEQ---VYDELIARCNGVVPSREK---DSLIWLG-- 576
+ + + E NL R + +Y+ + A + + D +W
Sbjct: 1270 TRRVIDLGIPLETNLETVLRTHQHRQHRAAIYNRINAEIQRLQQQEREAGPDISLWRSLK 1329
Query: 577 -DTNGRYTVKTFCMEVELQLYGPPSWVVPSCVKKLAPQKVVLFLWQAAENRVAV--MVNL 633
D N R+ K V +W P K LW +NR++ +
Sbjct: 1330 NDFNKRFITKVTWNNVRTH-QPQQNWYKGVWFPYSTP-KYSFLLWLTVQNRLSTGDRIKA 1387
Query: 634 HNRGVLVDAEAVCVLCGQAEESVTHLILVCKFAWVLWSKVLLREGVVWCVPASILSLLKE 693
N G LV C LC AEE+ HL C++ +W + R + ++
Sbjct: 1388 WNSGQLV----TCTLCNNAEETRDHLFFSCQYTSYVWEALTQR--------LLSTNYSRD 1435
Query: 694 WDSL--------RKGSDLVLWRLIPYALAWSVWMARN 722
W+ L L L+R + A + +W RN
Sbjct: 1436 WNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERN 1472
>At4g10830 putative protein
Length = 1294
Score = 266 bits (680), Expect = 4e-71
Identities = 149/444 (33%), Positives = 247/444 (55%), Gaps = 5/444 (1%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG F++ W ++ ++++ + F+ + + +N I +IPK PE ++DYR
Sbjct: 808 PGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYR 867
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSGR 120
I+L +YK+++K L RL+G + ++S++Q +F GR + + ++I +E++ ++ + R
Sbjct: 868 PIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRKR 927
Query: 121 GG---FLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
+K D +KAYD +EW+FL M GF W WI V + +VLVNG P
Sbjct: 928 VSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIPHG 987
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGVC-LNHLQFADDT 236
+ ++G+RQGDPLSP LF LC L+ + G+ +G GV + HLQFADD+
Sbjct: 988 TIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDS 1047
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGVVVGT 295
L FC + L DV + + SG K+N +KS + G V N+L LG+
Sbjct: 1048 LFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHG 1107
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
YLG ++R + +IE+V+ +S + +S +G+ ++L+SVA ++P+Y M
Sbjct: 1108 GGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAM 1167
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ +K PL +V++IE L+ F W ++ R I W+AW+++ K+ GGLG L N A+
Sbjct: 1168 SCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQYSKKEGGLGFRDLAKFNDAL 1227
Query: 416 LLKWAWRFGQEPEALWRRVLCAKY 439
L K WR P +L+ R++ A+Y
Sbjct: 1228 LAKQVWRMINNPNSLFARIMKARY 1251
>At3g44650 putative protein
Length = 762
Score = 264 bits (674), Expect = 2e-70
Identities = 171/513 (33%), Positives = 261/513 (50%), Gaps = 35/513 (6%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF FF+E W ++ E + + F+ G L KG+N+ +ALIPK+ + + DYR
Sbjct: 24 PGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYR 83
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGR-QIANCLLIGNEVVDTMLSSG 119
IS +YK+++K+LA RL+ ++P ++ NQ SF K R I N LL + V D S
Sbjct: 84 PISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSI 143
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
+K+D +KA D+++W FL+N + + F + WI C++T + +V VNG FF
Sbjct: 144 SERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFF 203
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLA----IRERPCGVVLGPGVCLNHLQFADD 235
+ +GLRQG LSP LF +C+ LS + +++ I P +G L HL FADD
Sbjct: 204 QSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMG----LTHLSFADD 259
Query: 236 TLVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGT 295
++ D +C +E + +V F SGLK++ KS + + S QL VG
Sbjct: 260 LMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGE 319
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
LP+ YLG L +AP+IE++R + S S +S +GR ++ S+ + + +
Sbjct: 320 LPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWL 379
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+ ++ P + +IEKL FLW + + A ++W QVCK K GGLG+ LK N
Sbjct: 380 SAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVC 439
Query: 416 LLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIV--NVVLEDS 473
LK WR ++LW + V H +L+ R +F IV N L
Sbjct: 440 CLKLVWRIISHGDSLW------------VKWVEHNLLK------REIFWIVKENANLGSW 481
Query: 474 VLGKTFRDQ------CFCVVGDGLRISFWRDPW 500
+ K + + C VG+G SFW D W
Sbjct: 482 IWKKILKYRGVAKRFCKAEVGNGESTSFWFDDW 514
>At2g05980 putative non-LTR retroelement reverse transcriptase
Length = 1352
Score = 260 bits (665), Expect = 2e-69
Identities = 149/436 (34%), Positives = 244/436 (55%), Gaps = 9/436 (2%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDG+ FF+ W ++ +++ + F+ G L KG+N +ALI K+ + DYR
Sbjct: 618 PGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSGMKDYR 677
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV-DTMLSSG 119
IS +YK+++K++A RL+ ++P ++ NQ +F K R + LL+ +E+V D S
Sbjct: 678 PISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKESI 737
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
LK+D +KA+D ++W FL+N+++ + + WI C+ TA+ +V VNG + FF
Sbjct: 738 SSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFF 797
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGVCLNHLQFADDTLVF 239
E+GLRQG LSP L+ +C+ LS M ++ A+ ++ + L HL FADD +VF
Sbjct: 798 RSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVF 857
Query: 240 CDPECAQMEELFDVMTAFLWGSGLKLNYAKSEL----VGCNVDSAIVNQLAVELGVVVGT 295
D ++ + F S LK++ KS + + N ++I+ Q ELG T
Sbjct: 858 SDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELG----T 913
Query: 296 LPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHM 355
LP+ YLG L + + P++EK+R + S + +S +GRL +++SV S+I + +
Sbjct: 914 LPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWL 973
Query: 356 AVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAM 415
+V++ P + +IEK+ FLW + A +AW +VCK KE GGLG++ LK N+
Sbjct: 974 SVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVS 1033
Query: 416 LLKWAWRFGQEPEALW 431
LLK WR ++LW
Sbjct: 1034 LLKLIWRILSARDSLW 1049
>At2g11240 pseudogene
Length = 1044
Score = 256 bits (654), Expect = 4e-68
Identities = 162/511 (31%), Positives = 266/511 (51%), Gaps = 18/511 (3%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF+ +FF+ W + I+ + F+ L +N I LIPK Q+ + + DYR
Sbjct: 272 PGPDGFSASFFQSNWMTVGPNIVLEIQSFFSSSTLQPTINKTHITLIPKIQSLKRMVDYR 331
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVVDTMLSSG- 119
I+L YK+++K+L+ RLQ ++ ++SENQ +F R + +LI +E + + S G
Sbjct: 332 PIALCTVFYKIISKLLSRRLQPILQEIISENQSAFVPKRASNDNVLITHEALHYLKSLGA 391
Query: 120 --RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTE 177
R +K + +KAYD IEWDF+ +M+++GF W WI C++T + + L+NGS
Sbjct: 392 EKRCFMAVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQG 451
Query: 178 FFEIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPG-VCLNHLQFADDT 236
E+GLRQGDPLSP LF +C + LS + + + G+ + G +NHL FADDT
Sbjct: 452 AVTPERGLRQGDPLSPFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDT 511
Query: 237 LVFCDPECAQMEELFDVMTAFLWGSGLKLNYAKSELV-GCNVDSAIVNQLAVELGV-VVG 294
+ FC + + ++ + SG +N +KS + I + LG+ +VG
Sbjct: 512 IFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVG 571
Query: 295 TLPLPYLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYH 354
L YLG ++R + +++++R S S +S +G+ +L+SV +++P Y
Sbjct: 572 GLG-KYLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYT 630
Query: 355 MAVYKAPLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKA 414
M+ +K + + I+ + F W S +++ W+AW ++ K K+ GGLG + + N A
Sbjct: 631 MSCFKLLVSLCKRIQSALTHFWWDSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFNDA 690
Query: 415 MLLKWAWRFGQEPEALWRRVLCAKYGLNSIPLVLHRVLEGLRHPSRYMFDIVNVVLEDSV 474
+L K +WR Q P + R+L KY S L V H R + +++ S
Sbjct: 691 LLAKLSWRIVQSPSCVLVRILLGKYCRTSSFLDC-SVTAASSHGWRGICTGKDLI--KSQ 747
Query: 475 LGKTFRDQCFCVVGDGLRISFWRDPWVASKT 505
LGK V+G GL W +PW++ T
Sbjct: 748 LGK--------VIGSGLDTLVWNEPWLSLST 770
>At3g25485 unknown protein
Length = 979
Score = 256 bits (653), Expect = 5e-68
Identities = 148/436 (33%), Positives = 236/436 (53%), Gaps = 1/436 (0%)
Query: 1 PGPDGFNFTFFREFWHLIKEEIMQMFEEFYEGGKLVKGLNAGFIALIPKRQTPEMVTDYR 60
PGPDGF F++ W +I E + + F+E G L KG+N+ +ALIPK+ + + DYR
Sbjct: 387 PGPDGFTTEFYKATWEIIGAEFIVAVKSFFEKGFLPKGVNSTILALIPKKFETKEMKDYR 446
Query: 61 LISLIGSIYKLLAKVLAARLQGVMPYLLSENQFSFTKGRQIANCLLIGNEVV-DTMLSSG 119
IS IYK+++K++A RL+ ++P ++ NQ +F K R + LL+ E+V D S
Sbjct: 447 PISCCNVIYKVISKLIAKRLKEILPQFIAGNQSAFVKDRLLIQNLLLATEIVKDYHKESV 506
Query: 120 RGGFLLKLDFAKAYDNIEWDFLMNMMEDLGFGPRWRCWIHSCVSTATLAVLVNGSPTEFF 179
+K+D +KA+D+++W FL N++ L F + WI C++TA+ +V VNG FF
Sbjct: 507 SDRCAIKIDISKAFDSVQWSFLENVLHSLNFSQEFIHWIMLCITTASFSVQVNGELVGFF 566
Query: 180 EIEKGLRQGDPLSPLLFNLCVQGLSVMWNRLAIRERPCGVVLGPGVCLNHLQFADDTLVF 239
+GLRQG LSP LF + + LS M +R A ++ + L HL FADD +V
Sbjct: 567 NSSRGLRQGCSLSPYLFVIAMDVLSKMLDRAAGFKKFGYHPRCQTIGLTHLTFADDLMVL 626
Query: 240 CDPECAQMEELFDVMTAFLWGSGLKLNYAKSELVGCNVDSAIVNQLAVELGVVVGTLPLP 299
D + +E + V F SGLK++ KS + + ++ VG+LP+
Sbjct: 627 SDGKVRSVEGIVSVFDEFAKKSGLKISMEKSTIYLAGSANMYRREIEERFKFAVGSLPVR 686
Query: 300 YLGSVLGGDPRRRGFWAPVIEKVRVALAS*GSNSVSLSGRLVVLRSVASAIPIYHMAVYK 359
YLG L + P++E+++ + + + +S +GRL ++ SV +I + +A ++
Sbjct: 687 YLGLPLVTKRFSSADYRPLVEQIKRKIGTWTARYLSYAGRLNLISSVIWSICNFWIAAFR 746
Query: 360 APLGVVADIEKLMRCFLWGRSGGGRRIAWVAWEQVCKRKEIGGLGVEFLKFRNKAMLLKW 419
P + +I+KL FLW + A V WE +CK K GGLG+ LK N LK
Sbjct: 747 LPRECIREIDKLCSAFLWSGPELNSKRAKVNWEAICKPKREGGLGLRSLKEANDVSCLKL 806
Query: 420 AWRFGQEPEALWRRVL 435
WR+ ++LWR++L
Sbjct: 807 IWRWVSRGDSLWRKLL 822
Score = 33.1 bits (74), Expect = 0.73
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 644 AVCVLCGQAEESVTHLILVCKFAWVLWSKV 673
A CVLC A E+ HL C FA +WS +
Sbjct: 921 ATCVLCNNALETRDHLFFSCDFASEIWSNL 950
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.326 0.142 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,562,794
Number of Sequences: 26719
Number of extensions: 950404
Number of successful extensions: 2995
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 2530
Number of HSP's gapped (non-prelim): 235
length of query: 916
length of database: 11,318,596
effective HSP length: 108
effective length of query: 808
effective length of database: 8,432,944
effective search space: 6813818752
effective search space used: 6813818752
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)
Lotus: description of TM0166.1