BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0154.6
         (227 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g02180 unknown protein                                             141  2e-34
At4g26360 putative protein                                             32  0.36
At1g01950 unknown protein                                              29  2.3
At5g42630 unknown protein                                              28  3.0
At5g13480 putative protein                                             28  5.2
At5g02730 pathogenesis related protein - like                          28  5.2
At3g45680 putative transporter protein                                 28  5.2
At3g45710 putative transporter protein                                 27  6.8
At4g15900 PRL1 protein                                                 27  8.8
At3g42850 arabinose kinase - like protein                              27  8.8

>At1g02180 unknown protein
          Length = 226

 Score =  141 bits (356), Expect = 2e-34
 Identities = 75/195 (38%), Positives = 119/195 (60%), Gaps = 8/195 (4%)

Query: 6   LVVILSFLHSASTGSAATNTQIKVTNNPADKLVAAINENRTAYKVSELYDNAGLACIALQ 65
           L +IL FL  +S  +++     K+  N A ++V+ +N+NRTA K+ +L ++ GL C+ALQ
Sbjct: 8   LELILLFLSLSSVLASS-----KLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMALQ 62

Query: 66  YIKAYQGDCGAVGGPDAKKPPESQFAEVFAPNCGVKASSLAPITGRFLGCQTKYVHAPEA 125
           Y++  +G+C  V    + + PE  F +VFAPNCGV+  +   ITG  LGC +KY     A
Sbjct: 63  YVELCEGNCN-VNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEVA 121

Query: 126 FSEVLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNSTFAFE-GGVAK 184
           FS++L ++  +L +L +++HT+VG  +     G+ +FWC+LFS G  NS+F  E  G   
Sbjct: 122 FSDILFRDSSALSVLRNRSHTEVGVGMARLHKGT-FFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 185 LTKPGCFSGANDECS 199
             + GC+SG+   CS
Sbjct: 181 KQRTGCYSGSAFPCS 195


>At4g26360 putative protein
          Length = 1141

 Score = 31.6 bits (70), Expect = 0.36
 Identities = 14/39 (35%), Positives = 24/39 (60%)

Query: 129 VLIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLF 167
           ++++ QRSL +L +    +VG A+  +  G+  F CVLF
Sbjct: 824 MVVEEQRSLGLLFASQKMKVGLALEDSPSGTKRFVCVLF 862


>At1g01950 unknown protein
          Length = 893

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 113 LGCQTKYVHAPEAFSEVLIQNQRSLEILHSKNHTQVGAAVTGTD 156
           L CQ +Y+ + +   E LI NQR+ E  + K + +V   VT ++
Sbjct: 466 LKCQMEYMESVKKLEEKLISNQRNHE--NGKRNGEVNGVVTASE 507


>At5g42630 unknown protein
          Length = 276

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 21/71 (29%), Positives = 30/71 (41%), Gaps = 9/71 (12%)

Query: 99  GVKASSLAPITGRFLGCQTKYVHAPEAF---------SEVLIQNQRSLEILHSKNHTQVG 149
           G+K S  AP           +VHA +           S + + N + L + H K+H Q+ 
Sbjct: 98  GLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMY 157

Query: 150 AAVTGTDGGSP 160
             V  TD GSP
Sbjct: 158 RTVKCTDKGSP 168


>At5g13480 putative protein
          Length = 679

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 17/98 (17%)

Query: 135 RSLEILHSKNHTQVGAAVTGTDGGSPYFWCVLFSGGKPNST----------FAFEGGVAK 184
           RS+   H++N+      V+G DGG+  +W    +  K N T            F G + K
Sbjct: 169 RSMVWSHNENYM-----VSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLRIGFLGYIGK 223

Query: 185 LTKPGCFSGANDECSGAHDWSPLSVMWLFAASVLIALG 222
                 F      C+  H W   SV W    S+L++ G
Sbjct: 224 GVIEIRFGVM--PCNAGHGWDVKSVDWHPTKSLLVSGG 259


>At5g02730 pathogenesis related protein - like
          Length = 205

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 10/103 (9%)

Query: 4   LYLVVILSFLHSASTGSAATNTQIKVT--------NNPADKLVAAINENRTAYKVSELYD 55
           L L++I S    ++ G+++ +T+            N  + + + A N  R A   S L  
Sbjct: 19  LLLLLIFSGEFPSTAGTSSPDTKAAAARATNRGRRNKQSAEFLLAHNAARVASGASNLRW 78

Query: 56  NAGLACIALQYIKAYQGDCGAV--GGPDAKKPPESQFAEVFAP 96
           + GLA  A ++ K  + DC     GGP  +     Q +E ++P
Sbjct: 79  DQGLARFASKWAKQRKSDCKMTHSGGPYGENIFRYQRSENWSP 121


>At3g45680 putative transporter protein
          Length = 558

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 206 PLSVMWLFAASVLIALGFAF 225
           P+SV+WLF   V++ +G AF
Sbjct: 436 PMSVLWLFPPLVIVGIGEAF 455


>At3g45710 putative transporter protein
          Length = 556

 Score = 27.3 bits (59), Expect = 6.8
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 3/27 (11%)

Query: 199 SGAHDWSPLSVMWLFAASVLIALGFAF 225
           +G H   P+SV+WL  A V++ +G AF
Sbjct: 430 NGGH---PMSVLWLVPALVMVGIGEAF 453


>At4g15900 PRL1 protein
          Length = 486

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 20/68 (29%), Positives = 32/68 (46%), Gaps = 6/68 (8%)

Query: 100 VKASSLAPITGRFLGCQ---TKYVHAPEA-FSEVLIQNQRSLEILHSKNHTQVGAAVTGT 155
           V+A +L P    F       TK    P+  F   ++  Q++  I+++    + G  VTG 
Sbjct: 347 VRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKT--IINAMAVNEDGVMVTGG 404

Query: 156 DGGSPYFW 163
           D GS +FW
Sbjct: 405 DNGSIWFW 412


>At3g42850 arabinose kinase - like protein
          Length = 964

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 15/37 (40%), Positives = 22/37 (58%), Gaps = 2/37 (5%)

Query: 130 LIQNQRSLEILHSKNHTQVGAAVTGTDGGSPYFWCVL 166
           L+QN  +L+   ++N T  GA +TG  GGS    CV+
Sbjct: 880 LVQNMENLKSSKTENGTLYGAKITG--GGSGGTVCVI 914


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,181,799
Number of Sequences: 26719
Number of extensions: 217021
Number of successful extensions: 413
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 405
Number of HSP's gapped (non-prelim): 10
length of query: 227
length of database: 11,318,596
effective HSP length: 96
effective length of query: 131
effective length of database: 8,753,572
effective search space: 1146717932
effective search space used: 1146717932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)