BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0151.11
(1562 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 684 0.0
At1g48710 hypothetical protein 679 0.0
At1g58140 hypothetical protein 674 0.0
At3g60170 putative protein 658 0.0
At2g15650 putative retroelement pol polyprotein 625 e-179
At3g59720 copia-type reverse transcriptase-like protein 608 e-174
At1g32590 hypothetical protein, 5' partial 578 e-165
At2g20460 putative retroelement pol polyprotein 560 e-159
At3g25450 hypothetical protein 558 e-158
At2g16000 putative retroelement pol polyprotein 552 e-157
At1g70010 hypothetical protein 518 e-146
At2g05390 putative retroelement pol polyprotein 516 e-146
At1g31210 putative reverse transcriptase 511 e-144
At1g37110 480 e-135
At2g13930 putative retroelement pol polyprotein 479 e-135
At3g45520 copia-like polyprotein 476 e-134
At4g17450 retrotransposon like protein 469 e-132
At2g21460 putative retroelement pol polyprotein 466 e-131
At1g26990 polyprotein, putative 458 e-128
At5g35820 copia-like retrotransposable element 445 e-125
>At3g61330 copia-type polyprotein
Length = 1352
Score = 684 bits (1765), Expect = 0.0
Identities = 381/960 (39%), Positives = 536/960 (55%), Gaps = 36/960 (3%)
Query: 583 DQESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGESRMFQELKLKPGGE 636
++++ Y+ ++ + L+A K + WYLDSG S HM G MF EL G
Sbjct: 303 EEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 637 VGFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQK 692
V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 693 SCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKI 752
+ Q + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGL 480
Query: 753 SQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVK 812
LS+ +VRGLP + + +CE C GK K+ F ++ +PLEL+H D+ GP+K
Sbjct: 481 ELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIK 539
Query: 813 TESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGG 872
+S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GG
Sbjct: 540 PKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGG 599
Query: 873 EFES-----LFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEA 927
EF S + GI + PR+PQQNGVVERKNRT+ EMAR+ML+ + K AEA
Sbjct: 600 EFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEA 659
Query: 928 VNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSK 987
V A Y+ NR + + KTP E W KP +S+ FG + + ++ K D KS K
Sbjct: 660 VACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEK 719
Query: 988 CLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAP 1047
+ +GY SKG++ YN D K S ++ FD++ + D + N D P
Sbjct: 720 YIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNFFP 769
Query: 1048 EEAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETL--- 1104
E +E EP E PS+ T + T++ +E + + R RS YE T
Sbjct: 770 H-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTENQE 825
Query: 1105 -LSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVF 1163
L+L L + EP +A++ K W AM+EE+ KND W L P IG KWV+
Sbjct: 826 NLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVY 885
Query: 1164 RNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQM 1223
+ K N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQM
Sbjct: 886 KAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 945
Query: 1224 DVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN 1283
DVKSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ + E
Sbjct: 946 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEK 1005
Query: 1284 EFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELK 1343
+F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G +
Sbjct: 1006 DFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMS 1065
Query: 1344 YFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKL 1403
Y+LGI+V Q G +I Q Y KE+LKKF + +S TPM L K+++ V
Sbjct: 1066 YYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTT 1125
Query: 1404 YRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKT 1463
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y T
Sbjct: 1126 FKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTT 1185
Query: 1464 SEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
S+YKL GY D+ + GD +RKSTSG ++G +W SK+Q + LST EAEY++A C
Sbjct: 1186 SDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSC 1245
Score = 99.0 bits (245), Expect = 2e-20
Identities = 76/357 (21%), Positives = 165/357 (45%), Gaps = 41/357 (11%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
P+ ++ W RM++ LG D+W+I+ G+ P + + + D +K +
Sbjct: 11 PVLTKSNYDNWSLRMKAI-LGAH-DVWEIVEKGFIEPENEGSLSQTQKDGLRDSRK---R 65
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
KA ++ + + ++K+ + AK +E L+ S++G +VK+ + +L ++E+ M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENM 192
+ E + + FSR + ++ + + +V+R L + +VT IE T+D+E M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 193 SLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDE 252
++E+L+ L+ +E K+ + +D+ AE+ +Q +EE+ ++ +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDI---------------AEQVLNMQITKEENGQSYQRRGG 230
Query: 253 DELTLISK---RLNRIWKHRQ--SKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHY 307
++ + R W+ + + +G ++G+ + + + V C+ C + GHY
Sbjct: 231 GQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHY 290
Query: 308 KSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSDGESKDSWLLSKTKKQSQRE 364
S+C K +KK E ++ V+ + +D L++ KK Q+E
Sbjct: 291 ASEC-KAPSNKK---------------FEEKAHYVEEKIQEEDMLLMASYKKDEQKE 331
>At1g48710 hypothetical protein
Length = 1352
Score = 679 bits (1753), Expect = 0.0
Identities = 379/960 (39%), Positives = 533/960 (55%), Gaps = 36/960 (3%)
Query: 583 DQESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGESRMFQELKLKPGGE 636
++++ Y+ ++ + L+A K + WYLDSG S HM G MF EL G
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 637 VGFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQK 692
V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 693 SCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKI 752
+ Q + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGL 480
Query: 753 SQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVK 812
LS+ +VRGLP + + +CE C GK K+ F ++ + LEL+H D+ GP+K
Sbjct: 481 ELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIK 539
Query: 813 TESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGG 872
+S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GG
Sbjct: 540 PKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGG 599
Query: 873 EFES-----LFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEA 927
EF S + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K AEA
Sbjct: 600 EFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEA 659
Query: 928 VNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSK 987
V A Y+ NR + + KTP E W K +S+ FG + + ++ K D KS K
Sbjct: 660 VACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEK 719
Query: 988 CLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAP 1047
+ +GY SKG++ YN D K S ++ FD++ + D + N D P
Sbjct: 720 YIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNFFP 769
Query: 1048 EEAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETL--- 1104
E +E EP E PS+ T + T++ +E + + R RS YE T
Sbjct: 770 H-FEEDEPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTENQE 825
Query: 1105 -LSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVF 1163
L+L L + EP EA++ K W AM+EE+ KND W L P IG KWV+
Sbjct: 826 NLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVY 885
Query: 1164 RNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQM 1223
+ K N KG+V R KARLVA+GY Q+ GIDY E FAPVARLE +RL+IS + + +HQM
Sbjct: 886 KAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQM 945
Query: 1224 DVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLEN 1283
DVKSAFLNG + EEVY+ QP G+ + + D V +LKK+LYGLKQAPRAW R+ + E
Sbjct: 946 DVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEK 1005
Query: 1284 EFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELK 1343
+F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G +
Sbjct: 1006 DFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMS 1065
Query: 1344 YFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKL 1403
Y+LGI+V Q G +I Q Y KE+LKKF M +S TPM L K+++ V
Sbjct: 1066 YYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTT 1125
Query: 1404 YRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKT 1463
++ ++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y T
Sbjct: 1126 FKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTT 1185
Query: 1464 SEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
S+YKL GY D+ + GD +RKSTSG ++G +W SK+Q + LST EAEY++A C
Sbjct: 1186 SDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSC 1245
Score = 96.7 bits (239), Expect = 1e-19
Identities = 72/341 (21%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
P+ ++ W RM++ LG D+W+I+ G+ P + + + D +K +
Sbjct: 11 PVLTKSNYDNWSLRMKAI-LGAH-DVWEIVEKGFIEPENEGSLSQTQKDGLRDSRK---R 65
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
KA ++ + + ++K+ + AK +E L+ S++G +VK+ + +L ++E+ M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENM 192
+ E + + FSR + ++ + + +V+R L + +VT IE T+D+E M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 193 SLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDE 252
++E+L+ L+ +E K+ + +D+ E+ +Q +EE+ ++ +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDI---------------IEQVLNMQITKEENGQSYQRRGG 230
Query: 253 DELTLISKR---LNRIWKHRQ--SKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHY 307
++ + R W+ + + +G ++G+ + + + V C+ C + GHY
Sbjct: 231 GQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHY 290
Query: 308 KSDC--PKLKKDKKPKKHFKTK-----KSLMVTFDESESED 341
S+C P KK ++ + + K LM ++ + E E+
Sbjct: 291 ASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEE 331
>At1g58140 hypothetical protein
Length = 1320
Score = 674 bits (1738), Expect = 0.0
Identities = 370/956 (38%), Positives = 519/956 (53%), Gaps = 60/956 (6%)
Query: 583 DQESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGESRMFQELKLKPGGE 636
++++ Y+ ++ + L+A K + WYLDSG S HM G MF EL G
Sbjct: 303 EEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGN 362
Query: 637 VGFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQK 692
V G K ++ G G I + I NV + + N+LS+ QL +KGYD+
Sbjct: 363 VALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDN 422
Query: 693 SCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKI 752
+ Q + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 423 NLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGL 480
Query: 753 SQLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVK 812
LS+ +VRGLP + + +CE C GK K+ F ++ +PLEL+H D+ GP+K
Sbjct: 481 ELLSRKEMVRGLPCINHPNQ-VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIK 539
Query: 813 TESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGG 872
+S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GG
Sbjct: 540 PKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGG 599
Query: 873 EFES-----LFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEA 927
EF S + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K AEA
Sbjct: 600 EFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEA 659
Query: 928 VNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSK 987
V A Y+ NR + + KTP E W KP +S+ FG + + ++ K D KS K
Sbjct: 660 VACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEK 719
Query: 988 CLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAP 1047
+ +GY SKG++ YN D K S ++ FD++ + D + E + DK +
Sbjct: 720 YIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPT 779
Query: 1048 EEAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSL 1107
E P E+ P+ SQ +K
Sbjct: 780 REEPPSEEPTTPPTSPTSSQIEEKC----------------------------------- 804
Query: 1108 KGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKL 1167
EP EA++ K W AM+EE+ KND W L P IG KWV++ K
Sbjct: 805 -------EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKK 857
Query: 1168 NEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKS 1227
N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQMDVKS
Sbjct: 858 NSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKS 917
Query: 1228 AFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVR 1287
AFLNG + EEVY+ QP G+ + + D V +LKK+LYGLKQAPRAW R+ + E +F++
Sbjct: 918 AFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIK 977
Query: 1288 GKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLG 1347
+ L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G + Y+LG
Sbjct: 978 CPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLG 1037
Query: 1348 IQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGM 1407
I+V Q G +I Q Y KE+LKKF M +S TPM L K+++ V ++ +
Sbjct: 1038 IEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSL 1097
Query: 1408 IGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYK 1467
+GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y TS+YK
Sbjct: 1098 VGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1157
Query: 1468 LSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAIC 1523
L GY D+ + GD +RKSTSG ++G +W SK+Q + LST EAEY++A C
Sbjct: 1158 LVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSC 1213
Score = 97.1 bits (240), Expect = 7e-20
Identities = 72/341 (21%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
P+ ++ W RM++ LG D+W+I+ G+ P + + + D +K +
Sbjct: 11 PVLTKSNYDNWSLRMKAI-LGAH-DVWEIVEKGFIEPENEGSLSQTQKDGLRDSRK---R 65
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
KA ++ + + ++K+ + AK +E L+ S++G +VK+ + +L ++E+ M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENM 192
+ E + + FSR + ++ + + +V+R L + +VT IE T+D+E M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 193 SLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDE 252
++E+L+ L+ +E K+ + +D+ E+ +Q +EE+ ++ +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDI---------------VEQVLNMQITKEENGQSYQRRGG 230
Query: 253 DELTLISKR---LNRIWKHRQ--SKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHY 307
++ + R W+ + + +G ++G+ + + + V C+ C + GHY
Sbjct: 231 GQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHY 290
Query: 308 KSDC--PKLKKDKKPKKHFKTK-----KSLMVTFDESESED 341
S+C P KK ++ + + K LM ++ + E E+
Sbjct: 291 ASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEE 331
>At3g60170 putative protein
Length = 1339
Score = 658 bits (1697), Expect = 0.0
Identities = 373/944 (39%), Positives = 535/944 (56%), Gaps = 26/944 (2%)
Query: 605 KHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSS---PCI 661
+ + W+LDSGCS HMTG F EL+ V G + + +VG G++ V + I
Sbjct: 296 RDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVI 355
Query: 662 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 721
V V L +NLLS+ QL ++G ++ +C+ G+++ + N ++ + S+
Sbjct: 356 PEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASK 415
Query: 722 LEAQNVKCLLS---VNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEAC 778
+ +N CL + +++E +WH R GH + + L+ +V GLP LK A+ +C C
Sbjct: 416 PQ-KNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILK-ATKEICAIC 473
Query: 779 QKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 838
GK + K +S L+L+H D+ GP+ S GKRY + +DD++R TWV FL
Sbjct: 474 LTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFL 533
Query: 839 TRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFES-----LFDSYGIAHDFSCPRTP 893
K E+ F F A V+ E + +R+D GGEF S S+GI+ + TP
Sbjct: 534 HEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTP 593
Query: 894 QQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWK 953
QQNGV ERKNRT+ R+ML E + K F +EA + +IQNR + TP E W
Sbjct: 594 QQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWS 653
Query: 954 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEES 1013
KP + YF FGC+ YV + K D KS KC+ LG SE SK +R Y+ K I S
Sbjct: 654 GRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVIS 713
Query: 1014 IHVRFDD--KLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTLKK 1071
V FD+ D DQ+ + K L D K E EP G ++ +
Sbjct: 714 KDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSP 773
Query: 1072 SRITAAHPKELILGNKDEPVRTRSAFRPYE-------ETLLSLKGLVSLIE--PKSIDEA 1122
++ + R YE E LS+ L+ + E P D+A
Sbjct: 774 ILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDA 833
Query: 1123 LQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVA 1182
++DK W AME E+ KN+ W L P+ IG KWV++ KLNE G+V + KARLVA
Sbjct: 834 VKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVA 893
Query: 1183 QGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQ 1242
+GY+Q GIDYTE FAPVARL+ +R +++ S N + Q+DVKSAFL+G + EEVYV Q
Sbjct: 894 KGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQ 953
Query: 1243 PLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDD 1302
P GF E + + V+KL+K+LYGLKQAPRAWY R+ ++ L+ EF R + TLF KT +
Sbjct: 954 PEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGN 1013
Query: 1303 ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQS 1362
ILIV +YVDD+IF +++++C EF + M EFEMS +G++K+FLGI+V Q+ G +I Q
Sbjct: 1014 ILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQR 1073
Query: 1363 KYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDIL 1422
+Y +E+L +F M ES K P+ P L K++ KV + +++ ++GSL+YLT +RPD++
Sbjct: 1074 RYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLM 1133
Query: 1423 FSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMY--KKTSEYKLSGYCDAHYAGDR 1480
+ V L +RF S+PR +H A KRILRYLKGT LG+ Y +K KL + D+ YAGD
Sbjct: 1134 YGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDL 1193
Query: 1481 TERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICS 1524
+R+STSG + S + WASK+Q +ALST EAEYI+AA C+
Sbjct: 1194 NDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCA 1237
Score = 89.4 bits (220), Expect = 2e-17
Identities = 72/334 (21%), Positives = 144/334 (42%), Gaps = 52/334 (15%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
P FDG +++W ME+F +LW ++ +G V ++ KL +
Sbjct: 13 PRFDGY-YDFWSMTMENFLRS--RELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAKL--K 67
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
K + L AI E + I D+ +K I+ES+K ++G+ KVK ++ +L +++E M
Sbjct: 68 DLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAM 127
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENM 192
+ E I+ R +V ++ + V +++R L + +V SIE + D+ +
Sbjct: 128 KEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTL 187
Query: 193 SLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDE 252
S++EL L HE + + ++ +AL+ EE
Sbjct: 188 SIDELHGSLLVHEQRLN------------------GHVQEEQALKVTHEE---------- 219
Query: 253 DELTLISKRLNRIWKHRQSKYKGSG---KAKGKSESSGQKKSSLKEVTCFECKESGHYKS 309
R S+ +G G ++G+ G+ ++ V C++C GH++
Sbjct: 220 ----------------RPSQGRGRGVFRGSRGRGRGRGRSGTNRAIVECYKCHNLGHFQY 263
Query: 310 DCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVD 343
+CP+ +K+ + + ++ L++ + E + D
Sbjct: 264 ECPEWEKNANYAELEEEEELLLMAYVEQNQANRD 297
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 625 bits (1613), Expect = e-179
Identities = 362/941 (38%), Positives = 527/941 (55%), Gaps = 36/941 (3%)
Query: 604 LKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICV---DSSPC 660
L+ W +DSGC+ HMT E R F + + + G G I V
Sbjct: 321 LREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRI 380
Query: 661 IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLS 720
I NV LV GL NLLS+ Q+ GY V F K C + +G + N + + +KI+LS
Sbjct: 381 IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDANGKEIMNIEMTDKSFKIKLS 439
Query: 721 ELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQK 780
+E + + + E WH+RLGH S +++ Q+ LV GLP K + C+AC
Sbjct: 440 SVEEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNL 495
Query: 781 GKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTR 840
GK ++ F ++ T LE++H D+ GP++ +SI G RY ++ +DDY+ WV FL +
Sbjct: 496 GKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQ 555
Query: 841 KDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFESLFDSYGIAHDFSCPRTPQQNGVVE 900
K E+ F F A V+ + C I +R E + GI + P +PQQNG E
Sbjct: 556 KSETFATFKKFKALVEKQSNCSIKTLRP-----MEVFCEDEGINRQVTLPYSPQQNGAAE 610
Query: 901 RKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNK-TPYELWKNIKPNI 959
RKNR+L EMAR+ML E + AEAV T+ Y+QNR+ + I + TP E W KPN+
Sbjct: 611 RKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHKPNV 670
Query: 960 SYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRF- 1018
S+ FG +CYV + K DAK+ +L+GYS ++KG+R + + + +E S V F
Sbjct: 671 SHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDVVFQ 730
Query: 1019 -DDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEE-----DEPEEEAGPSDSQTL--- 1069
D K D D+ + V+K +SIN + + +E + D G + S L
Sbjct: 731 EDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSHVLSQV 790
Query: 1070 --KKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKG-LVSLIEPKSIDEALQDK 1126
++ R T+ PK+ + + ++ +E ++ LV+ EP++ DEA DK
Sbjct: 791 NDQEERETSESPKKY---KSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDK 847
Query: 1127 DWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYS 1186
+W AM EE+ KN W LV KPE +VI KW+++ K + G+ V++KARLVA+G+S
Sbjct: 848 EWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFS 907
Query: 1187 QQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGF 1246
Q+ GIDY ETFAPV+R + IR L++++ L+QMDVKSAFLNG + EEVYV QP GF
Sbjct: 908 QEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGF 967
Query: 1247 EDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIV 1306
E K + V +L K+LYGLKQAPRAWYER+ S+ ++N F R D L+ K +D+LIV
Sbjct: 968 VIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVLIV 1027
Query: 1307 QIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTK 1366
+YVDD+I N L F + M+ EFEM+ +G L YFLG++V+Q G ++ Q KY
Sbjct: 1028 SLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYAN 1087
Query: 1367 ELLKKFNMLESTVAKTPMHPTCI---LEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILF 1423
+L+ KF M ES TP+ P +E +DK K YR ++G LLYL ASRPD+++
Sbjct: 1088 KLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTK-YRRIVGGLLYLCASRPDVMY 1146
Query: 1424 SVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTER 1483
+ +R+ S P H KR+LRY+KGT+N G+++ +L GY D+ + G ++
Sbjct: 1147 ASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSLEDK 1206
Query: 1484 KSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICS 1524
KST+G LG + W S +Q T+A STAEAEYI A+C+
Sbjct: 1207 KSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYI--AVCA 1245
Score = 93.6 bits (231), Expect = 8e-19
Identities = 80/346 (23%), Positives = 159/346 (45%), Gaps = 61/346 (17%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGY--------ERPVDADGKKIPRSEMTA 64
P+FDG+++++W +M + F LW ++ +G E P A K + +T
Sbjct: 10 PIFDGEKYDFWSIKMATIFR--TRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTN 67
Query: 65 DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLI 124
D L IL +A++ + + +I +K ++ LK ++G+ +V+ K SL
Sbjct: 68 DTMALQ--------ILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLR 119
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
++YE+ M N++I+ + +L + + T + +++ LP + +V+ +E
Sbjct: 120 REYENLKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLE 179
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
TRD++ +++ EL+ ILK E + + ++ S E A +SK ++ ++
Sbjct: 180 QTRDLDALTMSELLGILKAQEARVTAREE---------STKEGAFYVRSKGRESGFKQDN 230
Query: 245 EASEDSDEDELTLISKRLNRIWK----HRQSKY-KGSGKAKGKSESSGQKKSSLKEVTCF 299
+ R+N+ K H+ SK+ + + K K++ G+ K S + C+
Sbjct: 231 -------------TNNRVNQDKKWCGFHKSSKHTEEECREKPKNDDHGKNKRS--NIKCY 275
Query: 300 ECKESGHYKSDCPKLKKDKKPKKHFKTKKSLMVTFDESESEDVDSD 345
+C + GHY ++C K K+ VT +E EDV+ D
Sbjct: 276 KCGKIGHYANEC-----------RSKNKERAHVTLEE---EDVNED 307
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 608 bits (1568), Expect = e-174
Identities = 348/904 (38%), Positives = 489/904 (53%), Gaps = 62/904 (6%)
Query: 584 QESGYLRTRLSMLQISLIAPLK------HQSWYLDSGCSRHMTGESRMFQELKLKPGGEV 637
+++ Y+ ++ + L+A K + WYLDSG S HM G MF EL G V
Sbjct: 304 EKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNV 363
Query: 638 GFGGNEKGKIVGTGTICV----DSSPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKS 693
G K ++ G G I + I NV + + N+LS+ QL +KGYD+ +
Sbjct: 364 ALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNN 423
Query: 694 CRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKIS 753
+ + KN ++ + + AQ +K + EE W+WH R GH + +
Sbjct: 424 LSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLK--MCYKEESWLWHLRFGHLNFGGLE 481
Query: 754 QLSKLNLVRGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKT 813
LS+ +VRGLP + + +CE C G K+ F ++ +PLEL+H D+ GP+K
Sbjct: 482 LLSRKEMVRGLPCINHPNQ-VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKP 540
Query: 814 ESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGE 873
+S+G Y ++ +DD+SR TWV FL K E +F F A V+ E I +RSD GGE
Sbjct: 541 KSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGE 600
Query: 874 FES-----LFDSYGIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAV 928
F S + GI + PR+PQQNGV ERKNRT+ EMAR+ML+ + K AEAV
Sbjct: 601 FTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAV 660
Query: 929 NTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKC 988
A Y+ NR + + KTP E W KP +S+ FG + + ++ +K D KS K
Sbjct: 661 ACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKY 720
Query: 989 LLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSDQSKLVEKFADLSINVSDKGKAPE 1048
+ +GY SKG++ YN D K S ++ FD++ + D + N D P
Sbjct: 721 IFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNS----------NEEDYNFFPH 770
Query: 1049 EAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETL---- 1104
E ++ EP E PS+ T + T++ +E + + R RS YE T
Sbjct: 771 -FEEDKPEPTREEPPSEEPTTPPTSPTSSQIEE---SSSERTPRFRSIQELYEVTENQEN 826
Query: 1105 LSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFR 1164
L+L L + EP EA++ K W AM+EE+ KND W L P IG KWV++
Sbjct: 827 LTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYK 886
Query: 1165 NKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMD 1224
K N KG+V R KARLVA+GYSQ+ GIDY E FAPVARLE +RL+IS + + +HQMD
Sbjct: 887 AKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMD 946
Query: 1225 VKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENE 1284
VKSAFLNG + EEVY+ QP G+ + + D V +LKK LYGLKQAPRAW R+ + E +
Sbjct: 947 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006
Query: 1285 FVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKY 1344
F++ + L+ K K+DILI +YVDD+IF N S+ +EF + M EFEM+ +G + Y
Sbjct: 1007 FIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSY 1066
Query: 1345 FLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLY 1404
+LGI+V Q G +I Q Y KE+LKKF M +S +
Sbjct: 1067 YLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPS------------------------ 1102
Query: 1405 RGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTS 1464
++GSL YLT +RPDIL++V + +R+ P TH A KRILRY+KGT N GL Y TS
Sbjct: 1103 --LVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTS 1160
Query: 1465 EYKL 1468
+YKL
Sbjct: 1161 DYKL 1164
Score = 98.6 bits (244), Expect = 3e-20
Identities = 73/341 (21%), Positives = 160/341 (46%), Gaps = 32/341 (9%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
P+ ++ W RM++ LG D+W+I+ G+ P + + + D +K +
Sbjct: 11 PVLTKSNYDNWSLRMKAI-LGAH-DVWEIVEKGFIEPENEGSLSQTQKDGLRDSRK---R 65
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
KA ++ + + ++K+ + AK +E L+ S++G +VK+ + +L ++E+ M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENM 192
+ E + + FSR + ++ + + +V+R L + +VT IE T+D+E M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 193 SLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDE 252
++E+L+ L+ +E K+ + +D+ E+ +Q +EE+ ++ +
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDI---------------VEQVLNMQITKEENGQSYQRRGG 230
Query: 253 DELTLISK---RLNRIWKHRQ--SKYKGSGKAKGKSESSGQKKSSLKEVTCFECKESGHY 307
++ + R W+ + + +G ++G+ + + + V C+ C + GHY
Sbjct: 231 GQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHY 290
Query: 308 KSDC--PKLKKDKKPKKHFKTK-----KSLMVTFDESESED 341
S+C P KK K+ + + K LM ++ + E E+
Sbjct: 291 ASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEE 331
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 578 bits (1490), Expect = e-165
Identities = 338/966 (34%), Positives = 511/966 (51%), Gaps = 61/966 (6%)
Query: 583 DQESGYLRTR---LSMLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGF 639
++E+ Y+ L M + I + Q W+LDSGCS HM G F EL V
Sbjct: 229 EKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRL 288
Query: 640 GGNEKGKIVGTGTICVDSS---PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRA 696
G + + + G G + ++ I +V V GL +NL S+ QL KG I C
Sbjct: 289 GDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEV 348
Query: 697 VSQIDGSVLFNSKRKNN----IYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKI 752
+ + ++ +S N ++ E + +CL + + +WH+R GH + + +
Sbjct: 349 WHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGL 408
Query: 753 SQLSKLNLVRGLPNLKFASD-ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPV 811
L++ +V+GLP + A+C+ C KGK + ++ +++ L+L+H D+ GP+
Sbjct: 409 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 468
Query: 812 KTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHG 871
S GKRY + +DD+SR W L+ K E+ F F A+V+ E ++V +RSD G
Sbjct: 469 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 528
Query: 872 GEFESL-FDSY----GIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAE 926
GE+ S FD Y GI + TPQQNGV ERKNR++ M R ML E + + F E
Sbjct: 529 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 588
Query: 927 AVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSS 986
AV A YI NR + + + TP E W + KP++ + FG + Y L + K D KS
Sbjct: 589 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 648
Query: 987 KCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKLDSD-QSKLVEKFADLSINVSDKGK 1045
KC++ G S+ SK +R Y+ I S V+FD++ + + K +E+ +L + SD
Sbjct: 649 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKSLEE--ELVWDNSDHEP 706
Query: 1046 APEEA----------EPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRS 1095
A EE + E +E EE + Q L ++ + KD V
Sbjct: 707 AGEEGPEINHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNAR 766
Query: 1096 AFRPYEETLLSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVH 1155
+E L + +P +EA Q + W AME E+ +N+ W LV+ PE
Sbjct: 767 VLITQDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAK 826
Query: 1156 VIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVN 1215
VIG KW+F+ K NEKG+V + KARLVA+GY Q+ G+D+ E FAPVA+ + IRL++ +
Sbjct: 827 VIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAE 886
Query: 1216 HNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYER 1275
+ Q+DVKSAFL+G + E+V+V QP GFE E++ V+KLKK+LYGLKQAPRAWY R
Sbjct: 887 KGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSR 946
Query: 1276 LSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFE 1335
+ F + F + + TLF K + D L+V +YVDD+I+ ++ + + F M EF
Sbjct: 947 IEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFA 1006
Query: 1336 MSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDK 1395
M+ +G++KYFLG++V Q G +I+Q KY E++KK+ M K P+ P +K K
Sbjct: 1007 MTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPG---QKLTK 1063
Query: 1396 SGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTN 1455
+G V +R+ P E HL A+KRILRY++GT +
Sbjct: 1064 AGAV-----------------------------SRYMESPNEQHLLAVKRILRYVQGTLD 1094
Query: 1456 LGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEA 1515
LG+ Y++ +L G+ D+ YAGD +RKSTSG LG ++WASK+Q + LST EA
Sbjct: 1095 LGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEA 1154
Query: 1516 EYISAA 1521
E++SA+
Sbjct: 1155 EFVSAS 1160
Score = 78.2 bits (191), Expect = 4e-14
Identities = 56/248 (22%), Positives = 113/248 (44%), Gaps = 46/248 (18%)
Query: 74 HKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIME 133
HK + L ++I + I +E +K ++ES+K ++GN +V+ ++ L + +E M+
Sbjct: 26 HKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMK 85
Query: 134 PNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIELTRDVENMS 193
E+I FSR + +R L + V +++R L E + +V +IE + +++ ++
Sbjct: 86 IGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELT 145
Query: 194 LEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDED 253
++ L S L HE Q+L + + + + L+AE +
Sbjct: 146 VDGLQSSLMVHE------QNLSRHDV------------EERVLKAETQ------------ 175
Query: 254 ELTLISKRLNRIWKHRQSKYKGS----GKAKGKSESSGQKKSSLKEVTCFECKESGHYKS 309
W+ + +G G+ +G + G+ + V CF+C + GHYK+
Sbjct: 176 ------------WRPDGGRGRGGSPSRGRGRGGYQGRGRGYVNRDTVECFKCHKMGHYKA 223
Query: 310 DCPKLKKD 317
+CP +K+
Sbjct: 224 ECPSWEKE 231
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 560 bits (1444), Expect = e-159
Identities = 325/939 (34%), Positives = 508/939 (53%), Gaps = 34/939 (3%)
Query: 604 LKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDN 663
L +W +DSG + H++ + ++FQ L V +I G GT+ ++ + N
Sbjct: 437 LSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQN 496
Query: 664 VLLVDGLTHNLLSISQLA-DKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 722
VL + NL+SIS L D G VIF+ C+ G L KR N+Y + ++
Sbjct: 497 VLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD-TQS 555
Query: 723 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
A +V ++ V+ VWH+RLGH S ++ LS+ V G K A C C K
Sbjct: 556 PAISVNAVVDVS----VWHKRLGHPSFSRLDSLSE---VLGTTRHKNKKSAYCHVCHLAK 608
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
K+ F + N + S ELLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 609 QKKLSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKS 667
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGE--FESLFDSYGIAHDFSCPRTPQQNGVVE 900
+ VF FI V+N+ R+ VRSD+ E F + + GI SCP TP+QN VVE
Sbjct: 668 DVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPEQNSVVE 727
Query: 901 RKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNIS 960
RK++ + +AR ++ ++ M+ + + V TA ++ NR + NKTP+E+ P+ S
Sbjct: 728 RKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYS 787
Query: 961 YFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDD 1020
FGC+CY + + HKF +S C+ LGY KG++ + ++ + S +V F +
Sbjct: 788 QLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHE 847
Query: 1021 KL----DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTLKKSRITA 1076
+L S QS ++ G + P S S + K RIT
Sbjct: 848 ELFPLASSQQSATTASDVFTPMDPLSSGNSITSHLPSPQI-------SPSTQISKRRITK 900
Query: 1077 --AHPKEL--ILGNKDE--PVRTRSAFRPYEET-LLSLKGLVSLIEPKSIDEALQDKDWI 1129
AH ++ NKD+ P+ + ++ + +L + + + P+S EA K+W
Sbjct: 901 FPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWC 960
Query: 1130 LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQE 1189
A+++E+ + D W + P +G KWVF K + G + R KAR+VA+GY+Q+E
Sbjct: 961 GAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKE 1020
Query: 1190 GIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDE 1249
G+DYTETF+PVA++ ++LL+ S + L+Q+D+ +AFLNG + E +Y+ P G+ D
Sbjct: 1021 GLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADI 1080
Query: 1250 K----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILI 1305
K P+ V +LKKS+YGLKQA R W+ + S+ LL F + D TLF + + ++
Sbjct: 1081 KGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFIV 1140
Query: 1306 VQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYT 1365
+ +YVDDI+ S + + +E ++A F++ +G LKYFLG++V +T EG + Q KY
Sbjct: 1141 LLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYA 1200
Query: 1366 KELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSV 1425
ELL +ML+ + PM P L K D +++YR ++G L+YLT +RPDI F+V
Sbjct: 1201 LELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAV 1260
Query: 1426 HLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKS 1485
+ +F S PR HL A+ ++L+Y+KGT GL Y + L GY DA + R+S
Sbjct: 1261 NKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRS 1320
Query: 1486 TSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICS 1524
T+G F+GS+L+SW SK+Q T++ S+AEAEY + A+ S
Sbjct: 1321 TTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALAS 1359
>At3g25450 hypothetical protein
Length = 1343
Score = 558 bits (1437), Expect = e-158
Identities = 334/948 (35%), Positives = 511/948 (53%), Gaps = 45/948 (4%)
Query: 606 HQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSS----PCI 661
+ +WYLD+G S HMTG F +L G+V FG + I G G+I S +
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKIL 348
Query: 662 DNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLS 720
+V + L N+LS+ Q + G D+ + + +G++L ++R +N +YK+
Sbjct: 349 FDVYYIPDLKSNILSLGQATESGCDIRMREDYL-TLHDREGNLLIKAQRSRNRLYKV--- 404
Query: 721 ELEAQNVKCL-LSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQ 779
LE +N KCL L+ E +WH RLGH S I + K LV G+ + C +C
Sbjct: 405 SLEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCL 464
Query: 780 KGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLT 839
GK + F ++ LEL+H DL GP+ + KRY V++DD+SR+ W L
Sbjct: 465 FGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLK 524
Query: 840 RKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFESL-FDSY----GIAHDFSCPRTPQ 894
K E+ F F A V+ E I R+D GGEF S F + GI + P TPQ
Sbjct: 525 EKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQ 584
Query: 895 QNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKN 954
QNGVVER+NRTL M R++L+ M + EAV + Y+ NR+ R + N+TPYE++K+
Sbjct: 585 QNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKH 644
Query: 955 IKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESI 1014
KPN+ + FGCV Y L K D +S + LG SK +R + + I S
Sbjct: 645 KKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSR 704
Query: 1015 HVRFDDKLD----SDQSKLVEKFADLSINVSD---KGKAPEEAEPEEDEPEEEAGPSDSQ 1067
V FD+ S+ ++ +I +S+ G + E +E EE + +
Sbjct: 705 DVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDE 764
Query: 1068 TLKKSRITAAHPKELILGNKDEPVRT--RSAFRPY-------------EETLLSLKGLVS 1112
+ + T H + + +PVR R RP E LL++
Sbjct: 765 NIIEEAETEEHDQSQ---EEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVND--- 818
Query: 1113 LIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGD 1172
EP EA + K+W A +EE+ KN WSLV P IG KWVF+ K N G
Sbjct: 819 --EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGS 876
Query: 1173 VVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNG 1232
+ + KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+I+ + ++ +H +DVK+AFL+G
Sbjct: 877 INKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHG 936
Query: 1233 YISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDT 1292
+ E+VYV QP GF +++ + V+KL K+LYGL+QAPRAW +L+ L E +F + +
Sbjct: 937 ELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEP 996
Query: 1293 TLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQ 1352
+L+ K ++IL+V +YVDD++ +N + F + M +FEMS +G+L Y+LGI+V Q
Sbjct: 997 SLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQ 1056
Query: 1353 TPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLL 1412
+ +G + Q +Y K++L++ M + TPM + L K ++ + YR IG L
Sbjct: 1057 SKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLR 1116
Query: 1413 YLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYC 1472
YL +RPD+ ++V + +R+ +PRE+H A+K+ILRYL+GTT+ GL +KK L GY
Sbjct: 1117 YLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYS 1176
Query: 1473 DAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
D+ + D + KST G+ +L ++W S++Q + LS+ EAE+++A
Sbjct: 1177 DSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAA 1224
Score = 55.8 bits (133), Expect = 2e-07
Identities = 48/231 (20%), Positives = 106/231 (45%), Gaps = 27/231 (11%)
Query: 13 PMFDGQRFEYWKDRMESFFLGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKKLYSQ 72
PM + + W RME+ LW I G +AD++K
Sbjct: 23 PMLNSVNYTVWTMRMEAVLRVHK--LWGTIEPG-----------------SADEEK---- 59
Query: 73 HHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIM 132
+ ARA+L +I ++ ++ + ++E++K + G ++VKE++ +L+ +++ M
Sbjct: 60 NDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKLKM 119
Query: 133 EPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLP-ESWMPLVTSIELTRDVEN 191
+ +E+I++ R + L + V + ++ LP + ++ +V ++E D++
Sbjct: 120 KDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDLKT 179
Query: 192 MSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEE 242
+ E++ +K +E + + D + L ++ E+ E L+ EEEE
Sbjct: 180 TTFEDIAGRIKTYEDRVWDDDDSHEDQGKLMTEVEE---EVVDDLEEEEEE 227
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 552 bits (1422), Expect = e-157
Identities = 321/940 (34%), Positives = 507/940 (53%), Gaps = 32/940 (3%)
Query: 604 LKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDN 663
L +W +DSG + H++ + +F L V KI G GT+ ++ + N
Sbjct: 426 LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKN 485
Query: 664 VLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSEL 722
VL + NL+SIS L D G VIF++ SC I G +L +R N+Y + + +
Sbjct: 486 VLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGD- 544
Query: 723 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
++ +V ++ ++ +WHRRLGHAS++++ +S G K C C K
Sbjct: 545 QSISVNAVVDIS----MWHRRLGHASLQRLDAISDS---LGTTRHKNKGSDFCHVCHLAK 597
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
K+ F N V +LLHID++GP E++ G +Y + IVDD+SR TW+ L K
Sbjct: 598 QRKLSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKS 656
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGE--FESLFDSYGIAHDFSCPRTPQQNGVVE 900
E VF FI QV+N+ ++ VRSD+ E F S + GI SCP TP+QN VVE
Sbjct: 657 EVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTSFYAEKGIVSFHSCPETPEQNSVVE 716
Query: 901 RKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNIS 960
RK++ + +AR ++ ++ + + V TA ++ NR + ++NKTPYE+ P
Sbjct: 717 RKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYE 776
Query: 961 YFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDD 1020
FGC+CY + + HKF +S CL LGY KG++ + ++ T+ S +V+F +
Sbjct: 777 QLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHE 836
Query: 1021 KL--------DSDQSKLVEKFADLSINV-SDKGKAPEEAEPE-EDEPEEEAGPSDSQTLK 1070
++ KL +S + SD +P + D P + + SQ ++
Sbjct: 837 EVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQIS----SQRVR 892
Query: 1071 K--SRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKSIDEALQDKDW 1128
K + + H + +K T S + + + + + P + EA K+W
Sbjct: 893 KPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEW 952
Query: 1129 ILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQ 1188
A++ E+ K + W + P+ +G KWVF K G++ R KARLVA+GY+Q+
Sbjct: 953 CEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQK 1012
Query: 1189 EGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFED 1248
EG+DYT+TF+PVA++ I+LL+ S + L Q+DV +AFLNG + EE+++ P G+ +
Sbjct: 1013 EGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAE 1072
Query: 1249 EK----KPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDIL 1304
K + V +LK+S+YGLKQA R W+++ SS LL F + D TLF K Y + +
Sbjct: 1073 RKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFV 1132
Query: 1305 IVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKY 1364
IV +YVDDI+ S +++ + +E + F++ +G+LKYFLG++V +T G I Q KY
Sbjct: 1133 IVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKY 1192
Query: 1365 TKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFS 1424
ELL+ ML PM P + K+D + YR ++G L+YLT +RPDI F+
Sbjct: 1193 ALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFA 1252
Query: 1425 VHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERK 1484
V+ +F S PR THLTA R+L+Y+KGT GL Y +S+ L G+ D+ +A + R+
Sbjct: 1253 VNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRR 1312
Query: 1485 STSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICS 1524
ST+ F+G +L+SW SK+Q T++ S+AEAEY + A+ +
Sbjct: 1313 STTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALAT 1352
>At1g70010 hypothetical protein
Length = 1315
Score = 518 bits (1334), Expect = e-146
Identities = 313/904 (34%), Positives = 473/904 (51%), Gaps = 33/904 (3%)
Query: 650 TGTICVDSSPCIDNVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNS 708
+G++ + +++VL + NLLS+S L G + F++ SC ++
Sbjct: 314 SGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMG 373
Query: 709 KRKNNIYKIRLSELEAQNVKCLLSVNE--EQWVWHRRLGHASMRKISQLSKLNLVRGLPN 766
K+ N+Y + L L ++V +WH+RLGH S++K+ +S L P
Sbjct: 374 KQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQPMSSL---LSFPK 430
Query: 767 LKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIV 826
K +D C C K +PF + N S SRP +L+HID +GP ++ G RY + IV
Sbjct: 431 QKNNTDFHCRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYRYFLTIV 489
Query: 827 DDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGE--FESLFDSYGIA 884
DDYSR TWV L K + V TF+ V+N+ I VRSD+ E F + S GI
Sbjct: 490 DDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELNFTQFYHSKGIV 549
Query: 885 HDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPIL 944
SCP TPQQN VVERK++ + +AR++ ++ + + + + TA Y+ NR+ +
Sbjct: 550 PYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILE 609
Query: 945 NKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYN 1004
+K P+E+ P + FGC+CY + HKF ++ C +GY KG++ +
Sbjct: 610 DKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLD 669
Query: 1005 TDAKTIEESIHVRFDDKL----DSDQSKLVEKF-ADLS------------INVSDKGKAP 1047
+ +I S HV F ++L SD S+ + F DL+ +N SD +
Sbjct: 670 LETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSV 729
Query: 1048 E---EAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETL 1104
E A P + PE S + K + + + ++ E + S R + L
Sbjct: 730 EILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYL 789
Query: 1105 LSLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFR 1164
L L EP + EA + + W AM E + W + P IG +W+F+
Sbjct: 790 TFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFK 849
Query: 1165 NKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMD 1224
K N G V R KARLVAQGY+Q+EGIDY ETF+PVA+L +++LL+ + + L Q+D
Sbjct: 850 IKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLD 909
Query: 1225 VKSAFLNGYISEEVYVHQPLGFE----DEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFL 1280
+ +AFLNG + EE+Y+ P G+ D P+ V +LKKSLYGLKQA R WY + SS L
Sbjct: 910 ISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTL 969
Query: 1281 LENEFVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG 1340
L F++ D T F K L V +Y+DDII S N + M++ F++ +G
Sbjct: 970 LGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLG 1029
Query: 1341 ELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVC 1400
ELKYFLG+++ ++ +G +I Q KY +LL + L + PM P+ + + V
Sbjct: 1030 ELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVE 1089
Query: 1401 QKLYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMY 1460
YR +IG L+YL +RPDI F+V+ A+F PR+ HL A+ +IL+Y+KGT GL Y
Sbjct: 1090 VGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFY 1149
Query: 1461 KKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
TSE +L Y +A Y R R+STSG C FLG +L+ W S++Q ++ S+AEAEY S
Sbjct: 1150 SATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSL 1209
Query: 1521 AICS 1524
++ +
Sbjct: 1210 SVAT 1213
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 516 bits (1330), Expect = e-146
Identities = 325/942 (34%), Positives = 498/942 (52%), Gaps = 64/942 (6%)
Query: 608 SWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSS----PCIDN 663
SWYLD+G S HMTG + F +L G+V FG + + I G G+I + + + +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 664 VLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKR-KNNIYKIRLSEL 722
V + L N++S+ Q + G DV + +G +L + R +N +YK+ +L
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQL-TLHDREGCLLLRATRSRNRLYKV---DL 394
Query: 723 EAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGK 782
+NVKCL + + + + LV G+ N+ + C +C GK
Sbjct: 395 NVENVKCL------------------QLEAATMVRKELVIGISNIPKEKET-CGSCLLGK 435
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKD 842
+ PF S+ LEL+H DL GP+ + KRY +V++DD++R+ W L K
Sbjct: 436 QARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKS 495
Query: 843 ESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFESL-FDSY----GIAHDFSCPRTPQQNG 897
E+ F F +V+ E +I R+D GGEF S F + GI + P TPQQNG
Sbjct: 496 EAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNG 555
Query: 898 VVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKP 957
VVER+NRTL M R++L+ M + EAV + YI NR+ R + N+TPYE++K KP
Sbjct: 556 VVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKP 615
Query: 958 NISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYN-TDAKTIEESIHV 1016
N+ + FGC+ Y L K D +S + LG SK +R + T+ K I+ +
Sbjct: 616 NVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSD 675
Query: 1017 RFDDKLDSDQSKLVEKFADLSINVSD------KGKAPEEAEPEEDEPE---------EEA 1061
+ S + +F + I SD G+ E + EE E E EE
Sbjct: 676 SETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEET 735
Query: 1062 GPSDSQ---TLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLIEPKS 1118
PS + TL++S P L D+ V E+ LL++ EP
Sbjct: 736 QPSHATPLPTLRRSTRQVGKPNYL-----DDYVLMAEI--EGEQVLLAIND-----EPWD 783
Query: 1119 IDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKA 1178
EA + K+W A +EE+ KN WSL+ P VIG KWVF+ K N G + + KA
Sbjct: 784 FKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKA 843
Query: 1179 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEV 1238
RLVA+GY Q+ GIDY E FA VAR+E IR++I+ + ++ +H +DVK+AFL+G + E+V
Sbjct: 844 RLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDV 903
Query: 1239 YVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKT 1298
YV QP GF ++ V+KL K+LYGLKQAPRAW +L+ L E FV+ + +++ +
Sbjct: 904 YVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQ 963
Query: 1299 YKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTY 1358
+ +LIV IYVDD++ ++ L F + M +FEMS +G+L Y+LGI+V G
Sbjct: 964 EEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGII 1023
Query: 1359 IHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASR 1418
+ Q +Y +++++ M PM L K + + ++ YR MIG L Y+ +R
Sbjct: 1024 LRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTR 1083
Query: 1419 PDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAG 1478
PD+ + V + +R+ PRE+H A+K++LRYLKGT + GL K+ + L GY D+ ++
Sbjct: 1084 PDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSA 1143
Query: 1479 DRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISA 1520
D + KST+G+ +L ++W S++Q +ALS+ EAE+++A
Sbjct: 1144 DLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAA 1185
Score = 70.9 bits (172), Expect = 6e-12
Identities = 47/238 (19%), Positives = 106/238 (43%), Gaps = 38/238 (15%)
Query: 76 ARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSLIQKYESFIMEPN 135
ARA+L ++ ++ + +K ++E++K + G ++VKE+K +L+ +++ M+ N
Sbjct: 27 ARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDN 86
Query: 136 ESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLP-ESWMPLVTSIELTRDVENMSL 194
E+I+E R + L + V + ++ LP + ++ ++ ++E D+
Sbjct: 87 ETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGF 146
Query: 195 EELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESEEASEDSDEDE 254
E+++ +K +E + + D + E+ K + A E S +
Sbjct: 147 EDIVGRMKTYEDRVCDEDD--------------SPEEQGKLMYANSESSYDT-------- 184
Query: 255 LTLISKRLNRIWKHRQSKYKGSGKAKGKSESS-GQKKSSLKEVTCFECKESGHYKSDC 311
R + +G G++ G+ G ++ +V C+ C ++GHY S+C
Sbjct: 185 --------------RGGRGRGRGRSSGRGRGGYGYQQRDKSKVICYRCDKTGHYASEC 228
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 511 bits (1315), Expect = e-144
Identities = 316/952 (33%), Positives = 495/952 (51%), Gaps = 53/952 (5%)
Query: 607 QSWYLDSGCSRHMTGESRMFQELKLKPGGE-VGFGGNEKGKIVGTGTICVDSSPC---ID 662
+ W+ DS + H+T + Q G + V G I TG+ + SS ++
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 663 NVLLVDGLTHNLLSISQLADK-GYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSE 721
VL+V + +LLS+S+L D V F+ + V+ R+N +Y + E
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQE 439
Query: 722 LEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKG 781
A + EE VWH RLGHA+ + + L ++ K + +CE CQ G
Sbjct: 440 FVALYSNRQCAATEE--VWHHRLGHANSKALQHLQNSKAIQ---INKSRTSPVCEPCQMG 494
Query: 782 KFTKVPFKAKNVVSTSR---PLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFL 838
K +++PF ++S SR PL+ +H DL+GP S G +Y + VDDYSR++W L
Sbjct: 495 KSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPL 550
Query: 839 TRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEFESL-----FDSYGIAHDFSCPRTP 893
K E VF +F V+N+ +I +SD GGEF S +GI H SCP TP
Sbjct: 551 HNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610
Query: 894 QQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWK 953
QQNG+ ERK+R L E+ +ML + + F E+ TA YI NR+ + N +PYE
Sbjct: 611 QQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYEALF 670
Query: 954 NIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEES 1013
KP+ S FG CY +KFD +S +C+ LGY+ + KG+R + + S
Sbjct: 671 GEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKVYIS 730
Query: 1014 IHVRFDDK---LDSDQSKLVEKFADLSINVSDKGKAPEEAEP------------------ 1052
+V F++ LV +++ + K E + P
Sbjct: 731 RNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQLFSKPIDLNTYAG 790
Query: 1053 -------EEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLL 1105
+ EP SD + + AA+ +E ++ + R+++ +
Sbjct: 791 SQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAAN-QEQVINSHAMTTRSKAGIQKPNTRYA 849
Query: 1106 SLKGLVSLIEPKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRN 1165
+ ++ EPK++ A++ W A+ EE+N+ WSLV + ++++ +KWVF+
Sbjct: 850 LITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKT 909
Query: 1166 KLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDV 1225
KL+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL++ S + + Q+DV
Sbjct: 910 KLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDV 969
Query: 1226 KSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEF 1285
+AFL+G + E V+++QP GF D +KP HV +L K++YGLKQAPRAW++ S+FLL+ F
Sbjct: 970 SNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGF 1029
Query: 1286 VRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYF 1345
V K D +LF IL + +YVDDI+ ++QSL ++ + ++ F M +G +YF
Sbjct: 1030 VCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYF 1089
Query: 1346 LGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLYR 1405
LGIQ++ G ++HQ+ Y ++L++ M + TP+ L+ + +R
Sbjct: 1090 LGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQ--LDNLNSELFAEPTYFR 1147
Query: 1406 GMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSE 1465
+ G L YLT +RPDI F+V+ + P + +KRILRY+KGT +GL K+ S
Sbjct: 1148 SLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNST 1207
Query: 1466 YKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEY 1517
LS Y D+ +AG + R+ST+G C LGSNL+SW++KRQ T++ S+ EAEY
Sbjct: 1208 LTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEY 1259
>At1g37110
Length = 1356
Score = 480 bits (1235), Expect = e-135
Identities = 325/996 (32%), Positives = 505/996 (50%), Gaps = 82/996 (8%)
Query: 585 ESGYLRTRLSMLQ-ISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNE 643
E+G + +L + +S+ + W LDSGC+ HMT F + K + G +
Sbjct: 283 EAGVITEKLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDH 342
Query: 644 KGKIVGTGTICVDSS----PCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQ 699
+ G GTI +D+ ++NV V L NL+S L GY + R
Sbjct: 343 SVESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFK- 401
Query: 700 IDGSVLFNSKRKNNIYKIR----LSEL---EAQNVKCLLSVNEEQWVWHRRLGHASMRKI 752
+ N +Y + +SEL E VK L WH RLGH SM +
Sbjct: 402 -NNKTALRGSLSNGLYVLDGSTVMSELCNAETDKVKTAL--------WHSRLGHMSMNNL 452
Query: 753 SQLSKLNLV--RGLPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFG- 809
L+ L+ + + L+F CE C GK KV F S L +H DL+G
Sbjct: 453 KVLAGKGLIDRKEINELEF-----CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGS 506
Query: 810 PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSD 869
P T SI GK+Y + I+DD +R W+ FL KDE+ F + + V+N+ ++ +R+D
Sbjct: 507 PNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTD 566
Query: 870 HGGEF-ESLFDSY----GIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFL 924
+G EF S FDSY GI +C TPQQNGV ER NRT+ E R +L ++G+ + F
Sbjct: 567 NGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFW 626
Query: 925 AEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAK 984
AEA TA Y+ NR I + P E+W N KP + FG + YV + +L +
Sbjct: 627 AEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKP---R 683
Query: 985 SSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKL----------DSDQSKLVE--- 1031
+ K LGY +KG++ + + + S +V F + + D+D E
Sbjct: 684 ALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTS 743
Query: 1032 ------KFADLS-----INVSDKGKAPEEAEPEEDEPEE-EAGPSDSQTLKKSRITAAH- 1078
KFA+ S I + + E E D EE E +T K++ +T
Sbjct: 744 SEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKL 803
Query: 1079 PKELILGNKDEPVRTRSAFRPYEETLLSLKGLVSLI--EPKSIDEALQDKD---WILAME 1133
++ + N + P R F +L + + I EP+S EA++ +D W +A
Sbjct: 804 ARDRVRRNINPPTR----FTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATH 859
Query: 1134 EELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGID 1192
+E++ KN W LV KP+ +IG +W+F+ K G + R KARLVA+GY+Q+EG+D
Sbjct: 860 DEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVD 919
Query: 1193 YTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDEKKP 1252
Y E FAPV + +IR+L+S V+ ++ L QMDVK+ FL+G + EE+Y+ QP GF +
Sbjct: 920 YQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSE 979
Query: 1253 DHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKD-DILIVQIYVD 1311
+ V +LKKSLYGLKQ+PR W +R F+ +F+R + D ++ K + D + + +YVD
Sbjct: 980 NKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVD 1039
Query: 1312 DIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSK--YTKELL 1369
D++ A+++ E + EFEM MG LGI + + +G + S+ Y +++L
Sbjct: 1040 DMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVL 1099
Query: 1370 KKFNMLESTVAKTPM---HPTCILEKEDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSV 1425
+FNM + + P+ + +ED+ Y +GS++Y + +RPD+ +++
Sbjct: 1100 DRFNMSGAKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAI 1159
Query: 1426 HLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKS 1485
L +R+ S P H A+K ++RYLKG +L L++ K ++ ++GYCD++YA D R+S
Sbjct: 1160 CLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRS 1219
Query: 1486 TSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAA 1521
SG +G N VSW + Q +A+ST EAEYI+ A
Sbjct: 1220 ISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALA 1255
Score = 46.6 bits (109), Expect = 1e-04
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 66/316 (20%)
Query: 14 MFDGQR-FEYWKDRMESFF--LGFDADLWDI-------IVDGYERPVDADGKKIPRSEMT 63
+F+G R F WK R+++ LG L D + + DG+ E+
Sbjct: 12 VFNGDRDFSLWKIRIQAQLGVLGLKDTLTDFSLTKTVPLTKSEAKQESGDGESSGTKEVP 71
Query: 64 ADQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALSL 123
K Q +A+ I+++ IS K+ ++ +L NKK E+ +
Sbjct: 72 DPVK--IEQSEQAKNIIINHISDVVLLKVNHYATTADLWATL------NKKYMETSLPNR 123
Query: 124 IQ---KYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLV 180
I K SF M +I++ F +VA + L + I ++ LP S + L
Sbjct: 124 IYTQLKLYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLK 183
Query: 181 TSIELTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEE 240
+++ + ++++++ S K E + +E DL K A+ +E+ +
Sbjct: 184 HTLKYGN--KTLTVQDVTSSAKSLERELAEAVDLDKGQAAVLYTTERGRP---------- 231
Query: 241 EESEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFE 300
L+ ++ KG G+ KG+S S+ + K V C+
Sbjct: 232 ----------------LV-----------RNNQKG-GQGKGRSRSNSKTK-----VPCWY 258
Query: 301 CKESGHYKSDCPKLKK 316
CK+ GH K DC KK
Sbjct: 259 CKKEGHVKKDCYSRKK 274
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 479 bits (1233), Expect = e-135
Identities = 318/968 (32%), Positives = 489/968 (49%), Gaps = 76/968 (7%)
Query: 609 WYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSSP----CIDNV 664
W LD+GCS HMT F++ K G V G + + G G+I + +S + +V
Sbjct: 285 WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDV 344
Query: 665 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 724
+ +T NL+S+ L D+G + V S + ++++ +Y + E
Sbjct: 345 RYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGC--STILKGQKRDTLYILDGVTEEG 402
Query: 725 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG--LPNLKFASDALCEACQKGK 782
++ V +E +WH RLGH S + + L K +R + L+F CE C GK
Sbjct: 403 ESHSSA-EVKDETALWHSRLGHMSQKGMEILVKKGCLRREVIKELEF-----CEDCVYGK 456
Query: 783 FTKVPFKAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRK 841
+V F V T L +H DL+G P S+G +Y + VDDYSR W+ FL +K
Sbjct: 457 QHRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKK 515
Query: 842 DESHVVFSTFIAQVQNEKACRIVRVRSDHGGE-----FESLFDSYGIAHDFSCPRTPQQN 896
DE+ F + V+N+ ++ ++R+D+G E FE GI +C TPQQN
Sbjct: 516 DEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQN 575
Query: 897 GVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIK 956
G+ ER NRT+ + R+ML +GM K F AEA +TA Y+ NR I P E W
Sbjct: 576 GIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGAL 635
Query: 957 PNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHV 1016
P++S FGC+ Y+ + +L+ +S K + Y E KG++ + + K S +V
Sbjct: 636 PDLSSLRKFGCLAYIHADQGKLNP---RSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNV 692
Query: 1017 RF-------DDKLDSDQSKLVEKFADLSIN-------VSDKGKAPEE-AEPEE------- 1054
F D K DS + DL +N +D+G A ++ + P E
Sbjct: 693 IFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNP 752
Query: 1055 ---------DEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRPYEETLL 1105
DE EE + L ++ + I N F Y E
Sbjct: 753 VLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSED-- 810
Query: 1106 SLKGLVSLIEPKSIDEALQDKDWI---LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWV 1162
EPKS EAL D DW AM+EE+ SKN W LV KPE V +IG +WV
Sbjct: 811 -----DGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWV 865
Query: 1163 FRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLH 1221
F K G + R ARLVA+G++Q+EG+DY E F+PV + +IR L+S V++N+ L
Sbjct: 866 FTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQ 925
Query: 1222 QMDVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLL 1281
QMDVK+AFL+G++ EE+Y+ QP GFE ++ + V LK+SLYGLKQ+PR W R F+
Sbjct: 926 QMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMR 985
Query: 1282 ENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMG 1340
++ R D+ ++ K D I + +YVDD++ SAN+S E +++ EFEM +G
Sbjct: 986 GIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLG 1045
Query: 1341 ELKYFLGIQVDQTPEG--TYIHQSKYTKELLKKFNMLESTVAKTP------MHPTCILEK 1392
+ K LG+++ + + + Q Y K++L+ F M + TP + E
Sbjct: 1046 DAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEY 1105
Query: 1393 EDKSGKVCQKLYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLK 1451
E++ ++ Y IGS++Y + +RPD+ +S+ + +RF S P + H A+K +LRY++
Sbjct: 1106 EEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Query: 1452 GTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALS 1511
GT L ++K ++ L GYCD+ Y + R+S +G +G N +SW SK Q +A+S
Sbjct: 1166 GTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAIS 1225
Query: 1512 TAEAEYIS 1519
+ EAEY++
Sbjct: 1226 STEAEYMA 1233
>At3g45520 copia-like polyprotein
Length = 1363
Score = 476 bits (1224), Expect = e-134
Identities = 307/959 (32%), Positives = 491/959 (51%), Gaps = 61/959 (6%)
Query: 609 WYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDS----SPCIDNV 664
W +D+GC HMT + ++ + GG V G ++ G GT+ + + + + NV
Sbjct: 316 WIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNV 375
Query: 665 LLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEA 724
+ + NLLS+ G+ F ++ + VL +R + +Y +
Sbjct: 376 RYIPDMDRNLLSLGTFEKAGHK--FESENGMLRIKSGNQVLLEGRRYDTLYILHGKPATD 433
Query: 725 QNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKFASDALCEACQKGKFT 784
+++ + N++ +WHRRL H S + +S L K L K + CE C G+
Sbjct: 434 ESL-AVARANDDTVLWHRRLCHMSQKNMSLLIKKGF---LDKKKVSMLDTCEDCIYGRAK 489
Query: 785 KVPFKAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDE 843
K+ F T + LE +H DL+G P S+G +Y + +DDY+R WV FL KDE
Sbjct: 490 KIGFNLAQH-DTKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTKDE 548
Query: 844 SHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-ESLFDSY----GIAHDFSCPRTPQQNGV 898
+ F ++I+ V+N+ R+ +R+D+G EF +FD + G +C TPQQNGV
Sbjct: 549 AFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGV 608
Query: 899 VERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPN 958
VER NRT+ E R+ML ++G+ K F AEA +TA + N+ I + P + W P
Sbjct: 609 VERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDKRWSGKAPI 668
Query: 959 ISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRF 1018
SY +GCV +V +L+ ++ K +L+GY KG++ + + K S +V F
Sbjct: 669 YSYLRRYGCVTFVHTDGGKLN---LRAKKGVLIGYPSGVKGYKVWLIEEKKCVVSRNVSF 725
Query: 1019 DDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGP-SDSQTLKKSR--IT 1075
+ ++ L+++ +S D + + + E D+ G S +Q +R +T
Sbjct: 726 QE--NAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQSQAQVTPATRGAVT 783
Query: 1076 AAHPK------------------ELILGNKDEPVRTRSAFRP---YEETLLSLKGLVSLI 1114
+ P+ L+ + +R F Y E L + + +
Sbjct: 784 STPPRYETDDIEETDVHQSPLSYHLVRDRERREIRAPRRFDDEDYYAEALYTTED-GDAV 842
Query: 1115 EPKSIDEALQDKDWI---LAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKG 1171
EP EA++D++W LAM EE+ KND W+ V +PE +IG++W+++ K G
Sbjct: 843 EPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPG 902
Query: 1172 -DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMDVKSAFL 1230
+ R KARLVA+GY+Q+EG+DY E FAPV + +IR+L+S N+ L Q+DVK+AFL
Sbjct: 903 VEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFL 962
Query: 1231 NGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKV 1290
+G + E++Y+ P G E K + V L KSLYGLKQAPR W E+ + ++ E F R
Sbjct: 963 HGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDY 1022
Query: 1291 DTTLFCKTYKDD-ILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQ 1349
D+ + K DD + + YVDD++ + N + + +FEM +G K LGI+
Sbjct: 1023 DSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIE 1082
Query: 1350 --VDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPM--HPTCILEKEDKSGKVCQKL-- 1403
+D+ ++ Q Y ++LK FNMLES A TP+ H E+K + +
Sbjct: 1083 IIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATEEKLSTEEEYMNS 1142
Query: 1404 --YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMY 1460
Y +GS++Y + +RPD+ + V + +RF S P + H +K +LRY+KGT + L Y
Sbjct: 1143 VPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCY 1202
Query: 1461 KKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYIS 1519
K+ S++ + GYCDA YA D +R+S +G LG N +SW S Q +A S+ E EY+S
Sbjct: 1203 KRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMS 1261
Score = 63.5 bits (153), Expect = 9e-10
Identities = 84/325 (25%), Positives = 133/325 (40%), Gaps = 71/325 (21%)
Query: 15 FDGQR-FEYWKDRMESFF--LGFDADLWDIIVD-GYERPVDA--DGKKIPRSEMTADQKK 68
FDG+ + WK+++ + LG A L + G ER + + +K R +M A ++K
Sbjct: 11 FDGRGDYTMWKEKLLAHIDMLGLSAVLRESETPMGKERDSEKSDEDEKEEREKMEAFEEK 70
Query: 69 LYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALS----LI 124
KAR+ ++ ++S +KI A + E+L ++ SKAL L
Sbjct: 71 ----KRKARSTIVLSVSDRVLRKIKKETSAAAMLEALD-------RLYMSKALPNRIYLK 119
Query: 125 QKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTSIE 184
QK SF M N SIE F +VA + LN + +D I ++ LP+ + L +++
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLK 179
Query: 185 LTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEESE 244
+ +SL+E+ + + EL+ + KKSI K + ++ E+
Sbjct: 180 YSSGKTVLSLDEVAAAIYSRELEFGSV----KKSI---------KGQAEGLYVKDKAENR 226
Query: 245 EASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECKES 304
SE D K KGK S K+ C+ C E
Sbjct: 227 GRSEQKD--------------------------KGKGKRSKSKSKRG------CWICGED 254
Query: 305 GHYKSDCPKLKKDKKPKKHFKTKKS 329
GH KS CP K K FK + S
Sbjct: 255 GHLKSTCP-----NKNKPQFKNQGS 274
>At4g17450 retrotransposon like protein
Length = 1433
Score = 469 bits (1207), Expect = e-132
Identities = 290/924 (31%), Positives = 461/924 (49%), Gaps = 44/924 (4%)
Query: 607 QSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDSSPCIDNVLL 666
+ W +DSG + H+T ++ + V + KI G G I + + + NVL
Sbjct: 430 RGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLHNVLY 489
Query: 667 VDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKIRLSELEAQN 726
+ NL+S + + SQ+ + + N+ ++ +
Sbjct: 490 IPEFKFNLIS----------ELTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPE 539
Query: 727 VKCLLSVNEEQWVWHRRLGHASMRKISQLSK-LNL-VRGLPNLKFASDALCEACQKGKFT 784
SV + WH+RLGH + KI LS LNL V+ + +C C K
Sbjct: 540 FSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQK 599
Query: 785 KVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDDYSRWTWVKFLTRKDES 844
+ F+++ + S +L+HID +GP + TW+ L K +
Sbjct: 600 HLSFQSRQNMC-SAAFDLVHIDTWGPFSVPTNDA--------------TWIYLLKNKSDV 644
Query: 845 HVVFSTFIAQVQNEKACRIVRVRSDHGGE--FESLFDSYGIAHDFSCPRTPQQNGVVERK 902
VF FI V + ++ VRSD+ E F LF ++GI SCP TP+QN VVERK
Sbjct: 645 LHVFPAFINMVHTQYQTKLKSVRSDNAHELKFTDLFAAHGIVAYHSCPETPEQNSVVERK 704
Query: 903 NRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYELWKNIKPNISYF 962
++ + +AR +L ++ + F + V TA ++ NR+ + NK+PYE KNI P
Sbjct: 705 HQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYESL 764
Query: 963 HPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTIEESIHVRFDDKL 1022
FGC+CY + + HKF+ ++ C+ LGY KG++ + + + S HV F + +
Sbjct: 765 KTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHEDI 824
Query: 1023 DSDQSKLVEKFADLSINVSDKGKAPEEAEPEEDEPEEEAGPSDSQTLKK-SRITAAHPKE 1081
S ++ ++ D + +D P E+ D+ + S A P +
Sbjct: 825 FPFISSTIKD------DIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQDVSSSKALVPFD 878
Query: 1082 LILGNKDEPVRTRSAFRPYEETL----LSLKGLVSLIEPKSIDEALQDKDWILAMEEELN 1137
+ + +P + F Y T + + + + P+ EA K W AM+EE+
Sbjct: 879 PLSKRQKKPPKHLQDFHCYNNTTEPFHAFINNITNAVIPQRYSEAKDFKAWCDAMKEEIG 938
Query: 1138 QFSKNDVWSLVKKPESVHVIGTKWVFRNKLNEKGDVVRNKARLVAQGYSQQEGIDYTETF 1197
+ + WS+V P + IG KWVF K N G + R KARLVA+GY+Q+EG+DY ETF
Sbjct: 939 AMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETF 998
Query: 1198 APVARLEAIRLLISFSVNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFED---EKKPDH 1254
+PVA+L ++R+++ + +HQ+D+ +AFLNG + EE+Y+ P G+ D E P H
Sbjct: 999 SPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPH 1058
Query: 1255 -VFKLKKSLYGLKQAPRAWYERLSSFLLENEFVRGKVDTTLFCKTYKDDILIVQIYVDDI 1313
+ +L KS+YGLKQA R WY +LS+ L F + D TLF K ++ V +YVDDI
Sbjct: 1059 AICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDI 1118
Query: 1314 IFGSANQSLCKEFSEMMQAEFEMSMMGELKYFLGIQVDQTPEGTYIHQSKYTKELLKKFN 1373
+ S + +F+ +++ F++ +G KYFLGI++ ++ +G I Q KY ELL
Sbjct: 1119 MIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTG 1178
Query: 1374 MLESTVAKTPMHPTCILEKEDKSGKVCQKLYRGMIGSLLYLTASRPDILFSVHLCARFQS 1433
L S + P+ P+ L KED YR ++G L+YL +RPDI ++V+ +F
Sbjct: 1179 FLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSH 1238
Query: 1434 DPRETHLTAIKRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFL 1493
P HL+A+ ++LRYLKGT GL Y ++ L GY D+ + R+ + C F+
Sbjct: 1239 APTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFI 1298
Query: 1494 GSNLVSWASKRQSTIALSTAEAEY 1517
G LVSW SK+Q T+++STAEAE+
Sbjct: 1299 GDYLVSWKSKKQDTVSMSTAEAEF 1322
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 466 bits (1200), Expect = e-131
Identities = 313/976 (32%), Positives = 496/976 (50%), Gaps = 59/976 (6%)
Query: 588 YLRTRLSMLQISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKI 647
Y+ LS I L W +D+GCS HMT + F++L GG V G K+
Sbjct: 271 YVSEALSSTDIHL-----EDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKV 325
Query: 648 VGTGTICVDSSPC----IDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGS 703
G GTI V + + NV + + NLLS+ GY + ++ S
Sbjct: 326 RGIGTIRVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIA--GDS 383
Query: 704 VLFNSKRKNNIYKIRLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRG 763
VL +R +Y ++ + +++ ++ ++ +WHRRLGH S + + L K L
Sbjct: 384 VLLTVRRCYTLYLLQWRPVTEESLS-VVKRQDDTILWHRRLGHMSQKNMDLLLKKGL--- 439
Query: 764 LPNLKFASDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFG-PVKTESIGGKRYG 822
L K + CE C GK ++ F T LE +H DL+G P S+G +Y
Sbjct: 440 LDKKKVSKLETCEDCIYGKAKRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYF 498
Query: 823 MVIVDDYSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-ESLFDSY 881
+ +DDY+R + FL KDE+ F + V+N+ RI +R+D+G EF FD +
Sbjct: 499 ISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEF 558
Query: 882 ----GIAHDFSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNR 937
GI +C TPQQNGV ER NRTL E R+ML ++G+ K F AEA +T + N+
Sbjct: 559 CSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINK 618
Query: 938 ISVRPILNKTPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERS 997
+ + P + W P SY FGC+ +V +T D K + ++ K +L+GY
Sbjct: 619 TPSSALNYEVPDKRWSGKSPIYSYLRRFGCIAFV-HTDDG--KLNPRAKKGILVGYPIGV 675
Query: 998 KGFRFYNTDAKTIEESIHVRFDDKL---DSDQSKLVEK---------FADLSIN----VS 1041
KG++ + + K S +V F + D QSK EK + DL ++ ++
Sbjct: 676 KGYKIWLLEEKKCVVSRNVIFQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVIT 735
Query: 1042 DKGKAP--EEAEPEEDEPEEEAGPSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAF-- 1097
G P E P P S+ + I + +L+ +R F
Sbjct: 736 SGGDDPIVEAQSPFNPSPATTQTYSEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDD 795
Query: 1098 RPYEETLLSLKGLVSLIEPKSIDEALQDKDWI---LAMEEELNQFSKNDVWSLVKKPESV 1154
Y L IEP EA + +W LAM EE+ KN W++VK+P+
Sbjct: 796 EDYLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQ 855
Query: 1155 HVIGTKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFS 1213
VIG++W+++ KL G + R KARLVA+GY+Q++GIDY E FAPV + +IR+L+S
Sbjct: 856 KVIGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIV 915
Query: 1214 VNHNIVLHQMDVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWY 1273
++ L Q+DVK+AFL+G + E++Y+ P G+E+ K D V L KSLYGLKQAP+ W
Sbjct: 916 AQEDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWN 975
Query: 1274 ERLSSFLLENEFVRGKVDTTLFCKTYKDDILI-VQIYVDDIIFGSANQSLCKEFSEMMQA 1332
E+ ++++ E F+R D+ + K D + + +YVDD++ + N+ + E +
Sbjct: 976 EKFNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQ 1035
Query: 1333 EFEMSMMGELKYFLGIQVDQTPEGT--YIHQSKYTKELLKKFNMLESTVAKTPMHP---- 1386
F+M +G K LG+++ + E ++ Q+ Y ++L+ +NM ES TP+
Sbjct: 1036 RFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKM 1095
Query: 1387 -TCILEKEDKSGKVCQKL-YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAI 1443
+EK+++ + + Y +GS++Y + +RPD+ + V + +R+ S P H +
Sbjct: 1096 RAATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGV 1155
Query: 1444 KRILRYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASK 1503
K +LRY+KG+ L YK++S++K+ GYCDA +A + R+S +G LG + +SW S
Sbjct: 1156 KWVLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSG 1215
Query: 1504 RQSTIALSTAEAEYIS 1519
+Q +ALST EAEY+S
Sbjct: 1216 QQRVVALSTTEAEYMS 1231
Score = 44.7 bits (104), Expect = 4e-04
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 15 FDGQR-FEYWKDRMESFF--LGFDADLWDIIVDGYERPVDADGKKIPRSEMTADQKK--- 68
FDG+ + WK+++ + LG L + D +K+ ++T +++K
Sbjct: 11 FDGRGDYTMWKEKLMAHLDILGLSVAL---------KEEDDLVEKVAEMQLTEEEEKEEV 61
Query: 69 -----LYSQHHKARAILLSAISYEEYQKITDREFAK---GIFESLKMSHEGNKKVKESKA 120
L + KAR+ ++ +++ +KI + A G+ + L MS ++ +
Sbjct: 62 LRRELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIYQK-- 119
Query: 121 LSLIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLV 180
QK SF M N SIE F ++A + N + +D I ++ LP+ + L
Sbjct: 120 ----QKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLR 175
Query: 181 TSIELTRDVENMSLEELISILKCHELKRSEMQDLRKKSI 219
+++ +SL+E+++ + EL+ KKSI
Sbjct: 176 DTLKYGLGRVTLSLDEVVAAIYSKELELGS----NKKSI 210
>At1g26990 polyprotein, putative
Length = 1436
Score = 458 bits (1179), Expect = e-128
Identities = 298/960 (31%), Positives = 478/960 (49%), Gaps = 69/960 (7%)
Query: 598 ISLIAPLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVDS 657
I + L ++W +DSG S H+T E ++ K V KI GTG I +
Sbjct: 410 IPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTD 469
Query: 658 SPCIDNVLLVDGLTHNLLSISQLADKGYD-VIFNQKSCRAVSQIDGSVLFNSKRKNNIYK 716
+ + NVL + NLLS+S L V F C + +L + N+Y
Sbjct: 470 ALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYI 529
Query: 717 IRL-------SELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQLSKLNLVRGLPNLKF 769
+ L S ++V SV E +WH+RLGH S KI LS + + LP K
Sbjct: 530 LNLDKSLVDVSSFPGKSV--CSSVKNESEMWHKRLGHPSFAKIDTLSDVLM---LPKQKI 584
Query: 770 ASDAL-CEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTESIGGKRYGMVIVDD 828
D+ C C K +PFK+ N + + EL+HID +GP ++ RY + IVDD
Sbjct: 585 NKDSSHCHVCHLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDD 643
Query: 829 YSRWTWVKFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGE--FESLFDSYGIAHD 886
+SR TW+ L +K + VF +F+ V+ + ++ VRSD+ E F LF GI D
Sbjct: 644 FSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFNELFAKEGIKAD 703
Query: 887 FSCPRTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNK 946
CP TP+QN VVERK++ L +AR ++ ++G+ + + V TA ++ NR+ I N+
Sbjct: 704 HPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNE 763
Query: 947 TPYELWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTD 1006
TPYE KP+ S FGC+CY + KFD ++ C+ LGY KG++ + +
Sbjct: 764 TPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIE 823
Query: 1007 AKTIEESIHVRF-DDKLDSDQSKLVEKFADLSINVSDKGKAPEEAEP----EEDEPE--E 1059
++ S HV F +D S + + D ++ +E P D P +
Sbjct: 824 TYSVSISRHVIFYEDIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHD 883
Query: 1060 EAG-----PSDSQTLKKSRITAAHPKELILGNKDEPVRTRSAFRP------YEETLLSLK 1108
E+ PS+ ++ ++ ++ + H ++ N + P T+++ P Y
Sbjct: 884 ESSSMIFVPSEPKSTRQRKLPS-HLQDFHCYN-NTPTTTKTSPYPLTNYISYSYLSEPFG 941
Query: 1109 GLVSLIE----PKSIDEALQDKDWILAMEEELNQFSKNDVWSLVKKPESVHVIGTKWVFR 1164
+++I P+ EA DK W AM +E++ F + WS+ P +G KW+
Sbjct: 942 AFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIIT 1001
Query: 1165 NKLNEKGDVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHNIVLHQMD 1224
K G + R+KARLVA+GY+QQEGID+ TF+PVA++ +++L+S + LHQ+D
Sbjct: 1002 IKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLD 1061
Query: 1225 VKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLSSFLLENE 1284
+ +A LNG + EE+Y+ P G+ + + G + +P A
Sbjct: 1062 ISNALLNGDLEEEIYMKLPPGYSE-------------IQGQEVSPNA------------- 1095
Query: 1285 FVRGKVDTTLFCKTYKDDILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEMSMMGELKY 1344
+ D TLF K L+V +YVDDI+ S ++ E + + + F++ +GE K+
Sbjct: 1096 --KCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKF 1153
Query: 1345 FLGIQVDQTPEGTYIHQSKYTKELLKKFNMLESTVAKTPMHPTCILEKEDKSGKVCQKLY 1404
FLGI++ + +G + Q KY +LL + + + PM P L K+ + K Y
Sbjct: 1154 FLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQY 1213
Query: 1405 RGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAIKRILRYLKGTTNLGLMYKKTS 1464
R ++G L YL +RPDI F+V A++ S P + HL A+ +ILRYLKGT GL Y +
Sbjct: 1214 RRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADT 1273
Query: 1465 EYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQSTIALSTAEAEYISAAICS 1524
+ L G+ D+ + R+ +G F+G++LVSW SK+Q +++S+AEAEY + ++ +
Sbjct: 1274 NFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVAT 1333
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 445 bits (1145), Expect = e-125
Identities = 302/974 (31%), Positives = 503/974 (51%), Gaps = 90/974 (9%)
Query: 602 APLKHQSWYLDSGCSRHMTGESRMFQELKLKPGGEVGFGGNEKGKIVGTGTICVD----S 657
A + +W LD+GCS HMT + K G+V G + ++ G G + + S
Sbjct: 305 AEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGS 364
Query: 658 SPCIDNVLLVDGLTHNLLSISQLADKGYDVIFNQKSCRAVSQIDGSVLFNSKRKNNIYKI 717
+ + +V + ++ NL+S+ L DKG ++K + + D +VL K+++ +Y +
Sbjct: 365 TILLTDVRYIPEMSKNLISLGTLEDKGC-WFESKKGILTIFKNDLTVL-TGKKESTLYFL 422
Query: 718 RLSELEAQNVKCLLSVNEEQWVWHRRLGHASMRKISQL-SKLNLVRGLPNLKFASDALCE 776
+ + L A + +E +WH RLGH + + L SK +L + + + F +
Sbjct: 423 QGTTL-AGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNIM-ISFGA----- 475
Query: 777 ACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGPVKTE-SIGGKRYGMVIVDDYSRWTWV 835
AK+V T L+ +H DL+G SIG +Y + +DD++R TW+
Sbjct: 476 -------------AKHV--TKDKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWI 520
Query: 836 KFLTRKDESHVVFSTFIAQVQNEKACRIVRVRSDHGGEF-ESLFDSY----GIAHDFSCP 890
F+ KDE+ F + Q++N++ ++ + +D+G EF FDS+ G+ +C
Sbjct: 521 YFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCA 580
Query: 891 RTPQQNGVVERKNRTLQEMARTMLQETGMAKHFLAEAVNTACYIQNRISVRPILNKTPYE 950
TPQQNGV ER NRT+ R ML E+G+ K F AEA +TA ++ N+ I P E
Sbjct: 581 YTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEE 640
Query: 951 LWKNIKPNISYFHPFGCVCYVLNTKDRLHKFDAKSSKCLLLGYSERSKGFRFYNTDAKTI 1010
W P+ FG V Y+ + + +L+ ++ K + LGY + K F+ + + +
Sbjct: 641 KWTGHPPDYKILKKFGSVAYIHSDQGKLNP---RAKKGIFLGYPDGVKRFKVWLLEDRKC 697
Query: 1011 EESIHVRFDDKLDSDQSKLVEKFADLSIN-VSDKGKAPEEAE---------PEEDEPEEE 1060
S + F + + + +L N +S++ K E E +DE + E
Sbjct: 698 VVSRDIVFQEN---------QMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSE 748
Query: 1061 AGPSDSQTLKKSRITAAHPKELILGNKDEP---------------VRTRSAFRPYEETLL 1105
G + +Q + +A+ K++ + D+ +R F +++L+
Sbjct: 749 GGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLV 808
Query: 1106 SLKGLVS----LIEPKSIDEALQDKD---WILAMEEELNQFSKNDVWSLVKKPESVHVIG 1158
++ + EP++ +EA++ + W A EE++ KND W ++ KPE VIG
Sbjct: 809 GFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIG 868
Query: 1159 TKWVFRNKLNEKG-DVVRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLISFSVNHN 1217
KW+F+ K G + R KARLVA+G+SQ+EGIDY E F+PV + +IR L+S V +
Sbjct: 869 CKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFD 928
Query: 1218 IVLHQMDVKSAFLNGYISEEVYVHQPLGFEDEKKPDHVFKLKKSLYGLKQAPRAWYERLS 1277
+ L Q+DVK+AFL+G + E + + QP G+EDE + V LKKSLYGLKQ+PR W +R
Sbjct: 929 MELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFD 988
Query: 1278 SFLLENEFVRGKVDTTLFCKTYKD-DILIVQIYVDDIIFGSANQSLCKEFSEMMQAEFEM 1336
SF++ + + R K + ++ + D + + +YVDD++ S N+ ++ E + EFEM
Sbjct: 989 SFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEM 1048
Query: 1337 SMMGELKYFLGIQVDQTPEGTY--IHQSKYTKELLKKFNMLESTVAKTPMHPTCIL---- 1390
+G + LG+++ + E + QS+Y +L+ F M +S V++TP+ L
Sbjct: 1049 KDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAAN 1108
Query: 1391 EKEDKSGKVCQKL--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAIKRIL 1447
EK KL Y IGS++Y + SRPD+ + V + +RF S P + H A+K ++
Sbjct: 1109 EKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVM 1168
Query: 1448 RYLKGTTNLGLMYKKTSEYKLSGYCDAHYAGDRTERKSTSGNCQFLGSNLVSWASKRQST 1507
RY+KGT + L +KK ++++ GYCD+ YA D R+S +G G N +SW S Q
Sbjct: 1169 RYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRV 1228
Query: 1508 IALSTAEAEYISAA 1521
+ALST EAEY++ A
Sbjct: 1229 VALSTTEAEYMALA 1242
Score = 44.3 bits (103), Expect = 6e-04
Identities = 63/317 (19%), Positives = 125/317 (38%), Gaps = 57/317 (17%)
Query: 10 AKPPMFDGQR-FEYWKDRMESFF--LGFDADLWD---IIVDGYERPVDADGKKIPRSEMT 63
A+ FDG + WK+++ + LG L + +V+ + G + P + +
Sbjct: 6 AEVEKFDGDGDYILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEISDGGNQDPETATS 65
Query: 64 A-DQKKLYSQHHKARAILLSAISYEEYQKITDREFAKGIFESLKMSHEGNKKVKESKALS 122
+ K L + KAR+ ++ ++ +K+ ++ A G+ + L +
Sbjct: 66 KLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNR---IY 122
Query: 123 LIQKYESFIMEPNESIEEMFSRFQLLVAGIRPLNKSYTTKDHVIRVIRCLPESWMPLVTS 182
L Q+ + M N ++EE + F L++ + + +D I ++ LP + L +
Sbjct: 123 LKQRLYGYKMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKET 182
Query: 183 IELTRDVENMSLEELISILKCHELKRSEMQDLRKKSIALKSKSEKAKAEKSKALQAEEEE 242
++ + + LEE+ S + RS++ +L LK+ S+ L ++
Sbjct: 183 LKYCK--TTLHLEEITSAI------RSKILELGASGKLLKNNSD--------GLFVQDRG 226
Query: 243 SEEASEDSDEDELTLISKRLNRIWKHRQSKYKGSGKAKGKSESSGQKKSSLKEVTCFECK 302
E ++ KG K K +S+S G K TC+ C
Sbjct: 227 RSE-------------------------TRGKGPNKNKSRSKSKGAGK------TCWICG 255
Query: 303 ESGHYKSDCPKLKKDKK 319
+ GH+K C K+ K
Sbjct: 256 KEGHFKKQCYVWKERNK 272
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.323 0.137 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,912,404
Number of Sequences: 26719
Number of extensions: 1480614
Number of successful extensions: 9441
Number of sequences better than 10.0: 367
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 7312
Number of HSP's gapped (non-prelim): 1250
length of query: 1562
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1450
effective length of database: 8,326,068
effective search space: 12072798600
effective search space used: 12072798600
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0151.11