BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0135.9
         (645 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g50140 hypothetical protein, 5' partial                            859  0.0
At3g19740 ATPase, putative                                            675  0.0
At1g02890 hypothetical protein                                        456  e-128
At4g02470                                                             407  e-113
At4g24850 unknown protein (At4g24850)                                 397  e-111
At1g64110 unknown protein                                             396  e-110
At4g28000 putative protein                                            395  e-110
At1g62130 hypothetical protein                                        305  7e-83
At4g27680 unknown protein                                             275  4e-74
At5g53540 26S proteasome regulatory particle chain RPT6-like pro...   273  3e-73
At3g27120 spastin protein, putative                                   229  3e-60
At1g80350 CAD ATPase (AAA1)                                           221  7e-58
At2g34560 katanin like protein                                        207  1e-53
At2g27600 putative AAA-type ATPase                                    194  2e-49
At3g01610 putative cell division control protein                      178  7e-45
At3g09840 putative transitional endoplasmic reticulum ATPase          175  8e-44
At5g03340 transitional endoplasmic reticulum ATPase                   172  5e-43
At3g53230 CDC48 - like protein                                        169  4e-42
At2g45500 hypothetical protein                                        168  1e-41
At1g03000 putative peroxisome assembly factor-2                       161  1e-39

>At1g50140 hypothetical protein, 5' partial
          Length = 601

 Score =  859 bits (2220), Expect = 0.0
 Identities = 432/614 (70%), Positives = 515/614 (83%), Gaps = 15/614 (2%)

Query: 29  PLANGQRGEVYEVNGDRVAVILDISEDRENEVELESVNNDGRKPPVYWINVKNIEHDLDA 88
           PL++GQRGEVYEV G+RVAVI +  +D+ +E   +      +  P++W++VK++++DLD 
Sbjct: 1   PLSSGQRGEVYEVIGNRVAVIFEYGDDKTSEGSEKKPAEQPQMLPIHWLDVKDLKYDLDM 60

Query: 89  QSQDCYLAMEALREVLNSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSGPI 148
           Q+ D Y+AMEAL EVL S QPLIVYFPD +QWL ++VPK+ R EF  KV+EMFD+LSGPI
Sbjct: 61  QAVDGYIAMEALNEVLQSIQPLIVYFPDSTQWLSRAVPKTRRKEFVDKVKEMFDKLSGPI 120

Query: 149 VLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTD--KGQKTSDDDEINKLFSN 206
           V+ICGQNK ++G+KE+ +F             PL LK LT+   G+  S+++EI KLF+N
Sbjct: 121 VMICGQNKIETGSKEREKF-------------PLPLKGLTEGFTGRGKSEENEIYKLFTN 167

Query: 207 VVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVIL 266
           V+ + PPK+E+ L  FKKQL EDR+IVISRSN+NEL K LEEH+L C DL  +++D VIL
Sbjct: 168 VMRLHPPKEEDTLRLFKKQLGEDRRIVISRSNINELLKALEEHELLCTDLYQVNTDGVIL 227

Query: 267 TKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKN 326
           TKQKAEK +GWAKNHYL+SC +P VKG +L LPRESLEI+I+RL+ +E  S +PSQ+LKN
Sbjct: 228 TKQKAEKAIGWAKNHYLASCPVPLVKGGRLSLPRESLEISIARLRKLEDNSLKPSQNLKN 287

Query: 327 LAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPV 386
           +AKDE+E NF+SAVV PGEIGVKF+DIGALEDVKKALNELVILPMRRPELF  GNLLRP 
Sbjct: 288 IAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPC 347

Query: 387 KGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAP 446
           KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDAEKLTKALFSFA+KLAP
Sbjct: 348 KGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAP 407

Query: 447 VIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDD 506
           VIIFVDE+DSLLGARGG+ EHEATRRMRNEFMAAWDGLRSK++QRILILGATNRPFDLDD
Sbjct: 408 VIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDD 467

Query: 507 AVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCIT 566
           AVIRRLPRRIYVDLPDA+NR KIL+I L  ENL+ DFQF+KLA  T+GYSGSDLKNLCI 
Sbjct: 468 AVIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIA 527

Query: 567 AAYRPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEM 626
           AAYRPVQELL+EE+ G     +  LR L+LDDF+QSK+KV PSVAYDA ++NELRKWNE 
Sbjct: 528 AAYRPVQELLQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWNEQ 587

Query: 627 YGEGGTRTKSPFGF 640
           YGEGG+RTKSPFGF
Sbjct: 588 YGEGGSRTKSPFGF 601


>At3g19740 ATPase, putative
          Length = 439

 Score =  675 bits (1741), Expect = 0.0
 Identities = 341/441 (77%), Positives = 387/441 (87%), Gaps = 10/441 (2%)

Query: 208 VSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILT 267
           +++ PPK+E  L  F KQL EDR+IV+SRSNLNEL K LEE++L C DL  +++D VILT
Sbjct: 1   MNLVPPKEEENLIVFNKQLGEDRRIVMSRSNLNELLKALEENELLCTDLYQVNTDGVILT 60

Query: 268 KQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLK-- 325
           KQ+AEKV+GWA+NHYLSSC  P +K  +L LPRES+EI++ RLK  E +SR+P+Q+LK  
Sbjct: 61  KQRAEKVIGWARNHYLSSCPSPSIKEGRLILPRESIEISVKRLKAQEDISRKPTQNLKRF 120

Query: 326 ----NLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGN 381
               N+AKDEFE+NF+SAVV PGEIGVKFDDIGALE VKK LNELVILPMRRPELFT GN
Sbjct: 121 LFLQNIAKDEFETNFVSAVVAPGEIGVKFDDIGALEHVKKTLNELVILPMRRPELFTRGN 180

Query: 382 LLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFA 441
           LLRP KGILLFGPPGTGKTL+AKALATEAGANFIS++GSTLTSKWFGDAEKLTKALFSFA
Sbjct: 181 LLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFA 240

Query: 442 SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRP 501
           SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSK++QRILILGATNRP
Sbjct: 241 SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRP 300

Query: 502 FDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLK 561
           FDLDDAVIRRLPRRIYVDLPDA+NR KIL+I L  ENL+  F+FDKLA  T+GYSGSDLK
Sbjct: 301 FDLDDAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLK 360

Query: 562 NLCITAAYRPVQELLEEEKAGDNNITNVA--LRPLNLDDFVQSKSKVGPSVAYDAVSVNE 619
           NLCI AAYRPVQELL+EE    +++TN +  LRPL+LDDF+QSK+KV PSVAYDA ++NE
Sbjct: 361 NLCIAAAYRPVQELLQEE--NKDSVTNASPDLRPLSLDDFIQSKAKVSPSVAYDATTMNE 418

Query: 620 LRKWNEMYGEGGTRTKSPFGF 640
           LRKWNE YGEGGTRTKSPFGF
Sbjct: 419 LRKWNEQYGEGGTRTKSPFGF 439


>At1g02890 hypothetical protein
          Length = 1240

 Score =  456 bits (1172), Expect = e-128
 Identities = 252/541 (46%), Positives = 356/541 (65%), Gaps = 28/541 (5%)

Query: 123  KSVPKSI--RSEFFHKVEEMFDQLSGPIVLICGQNKAQSGTKEK---GQFTMILPNFARL 177
            K + KS+   ++ +  ++   + L   IV+I  Q +  +  KEK   G F        + 
Sbjct: 703  KDIEKSVSGNTDVYITLKSKLENLPENIVVIASQTQLDN-RKEKSHPGGFLFTKFGSNQT 761

Query: 178  AKLPLSLK-----RLTDKGQKTSDD-DEINKLFSNVVSIQPPKDENLLATFKKQLEEDRK 231
            A L L+       RL D+  +      +I +LF N V+IQ P+DE  L  +K +LE D +
Sbjct: 762  ALLDLAFPDTFGGRLQDRNTEMPKAVKQITRLFPNKVTIQLPEDEASLVDWKDKLERDTE 821

Query: 232  IVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQKAEKVVGWAKNHYLSSCLLPCV 291
            I+ +++N+  +R VL ++QL C D+  L   D  L     EKVVG+A NH+L +C  P V
Sbjct: 822  ILKAQANITSIRAVLSKNQLVCPDIEILCIKDQTLPSDSVEKVVGFAFNHHLMNCSEPTV 881

Query: 292  KGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPGEIGVKF 350
            K +KL +  ES+   +  L  ++  ++   +SLK++  ++EFE   +S V+PP +IGV F
Sbjct: 882  KDNKLIISAESITYGLQLLHEIQNENKSTKKSLKDVVTENEFEKKLLSDVIPPSDIGVSF 941

Query: 351  DDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEA 410
             DIGALE+VK  L ELV+LP++RPELF  G L +P KGILLFGPPGTGKT++AKA+ATEA
Sbjct: 942  SDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEA 1001

Query: 411  GANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEAT 470
            GANFI++S S++TSK     EK  KA+FS ASK+AP +IFVDEVDS+LG R    EHEA 
Sbjct: 1002 GANFINISMSSITSK----GEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAM 1057

Query: 471  RRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKIL 530
            R+M+NEFM  WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPD+ NR KIL
Sbjct: 1058 RKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKIL 1117

Query: 531  RIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK---------- 580
             +IL  E +  D   + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK          
Sbjct: 1118 SVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKEKKERSVAQAEN 1177

Query: 581  -AGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFG 639
             A     ++  +RPLN++DF  +  +V  SVA D+ ++NEL++WNE+YGEGG+R K+   
Sbjct: 1178 RAMPQLYSSTDVRPLNMNDFKTAHDQVCASVASDSSNMNELQQWNELYGEGGSRKKTSLS 1237

Query: 640  F 640
            +
Sbjct: 1238 Y 1238


>At4g02470
          Length = 371

 Score =  407 bits (1045), Expect = e-113
 Identities = 201/367 (54%), Positives = 272/367 (73%), Gaps = 12/367 (3%)

Query: 286 CLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA-KDEFESNFISAVVPPG 344
           C  P VK +KL +  ES+   +  L  ++  ++   +SLK++  ++EFE   +S V+PP 
Sbjct: 3   CTEPIVKDNKLVISAESISYGLQTLHDIQNENKSLKKSLKDVVTENEFEKKLLSDVIPPS 62

Query: 345 EIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAK 404
           +IGV FDDIGALE+VK+ L ELV+LP++RPELF  G L +P KGILLFGPPGTGKT++AK
Sbjct: 63  DIGVSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAK 122

Query: 405 ALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGA 464
           A+ATEAGANFI++S S++TSKWFG+ EK  KA+FS ASK+AP +IFVDEVDS+LG R   
Sbjct: 123 AVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENP 182

Query: 465 FEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAD 524
            EHEA R+M+NEFM  WDGLR+K+ +R+L+L ATNRPFDLD+AVIRRLPRR+ V+LPDA 
Sbjct: 183 GEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAT 242

Query: 525 NRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEK---- 580
           NR KIL +IL  E + PD   + +AN+TDGYSGSDLKNLC+TAA+ P++E+LE+EK    
Sbjct: 243 NRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIREILEKEKKEKT 302

Query: 581 --AGDNNITN-----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTR 633
               +N  T        +R L ++DF  +  +V  SV+ D+ ++NEL++WNE+YGEGG+R
Sbjct: 303 AAQAENRPTPPLYSCTDVRSLTMNDFKAAHDQVCASVSSDSSNMNELQQWNELYGEGGSR 362

Query: 634 TKSPFGF 640
            K+   +
Sbjct: 363 KKTSLSY 369


>At4g24850 unknown protein (At4g24850)
          Length = 442

 Score =  397 bits (1021), Expect = e-111
 Identities = 209/443 (47%), Positives = 292/443 (65%), Gaps = 19/443 (4%)

Query: 213 PKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDL----LHLDSDDVILTK 268
           P+DE  L  +K Q++ D +    +SN N LR VL    L C  L      +   D+ L +
Sbjct: 2   PQDEKRLTLWKHQMDRDAETSKVKSNFNHLRMVLRRRGLGCEGLETTWSRMCLKDLTLQR 61

Query: 269 QKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKGVETMSRQPSQSLKNLA 328
              EK++GWA  +++S    P     K+ L RES+E  I  L+    +    S     + 
Sbjct: 62  DSVEKIIGWAFGNHISKN--PDTDPAKVTLSRESIEFGIGLLQN--DLKGSTSSKKDIVV 117

Query: 329 KDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKG 388
           ++ FE   +S V+ P +I V FDDIGALE VK  L ELV+LP++RPELF  G L +P KG
Sbjct: 118 ENVFEKRLLSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKG 177

Query: 389 ILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVI 448
           ILLFGPPGTGKT++AKA+A EA ANFI++S S++TSKWFG+ EK  KA+FS ASK++P +
Sbjct: 178 ILLFGPPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSV 237

Query: 449 IFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAV 508
           IFVDEVDS+LG R    EHEA+R+++NEFM  WDGL ++E +R+L+L ATNRPFDLD+AV
Sbjct: 238 IFVDEVDSMLGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAV 297

Query: 509 IRRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAA 568
           IRRLPRR+ V LPD  NR  IL++IL  E+L PD    ++A++T+GYSGSDLKNLC+TAA
Sbjct: 298 IRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAA 357

Query: 569 YRPVQELLEEEKAGDNNIT-----------NVALRPLNLDDFVQSKSKVGPSVAYDAVSV 617
           +RP++E+LE+EK   +              +  LR LN++DF  +   V  SV+ ++ ++
Sbjct: 358 HRPIKEILEKEKRERDAALAQGKVPPPLSGSSDLRALNVEDFRDAHKWVSASVSSESATM 417

Query: 618 NELRKWNEMYGEGGTRTKSPFGF 640
             L++WN+++GEGG+  +  F F
Sbjct: 418 TALQQWNKLHGEGGSGKQQSFSF 440


>At1g64110 unknown protein
          Length = 824

 Score =  396 bits (1017), Expect = e-110
 Identities = 239/613 (38%), Positives = 352/613 (56%), Gaps = 104/613 (16%)

Query: 90  SQDCYLAMEALREVL---NSKQPLIVYFPDGSQWLHKSVPKSIRSEFFHKVEEMFDQLSG 146
           S D  L +++L +VL   +   P+++Y  D   +L +S         ++  +++  +LSG
Sbjct: 242 SFDEKLLVQSLYKVLAYVSKANPIVLYLRDVENFLFRS------QRTYNLFQKLLQKLSG 295

Query: 147 PIVLICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSN 206
           P VLI G       +++  +                              D++++ +F  
Sbjct: 296 P-VLILGSRIVDLSSEDAQEI-----------------------------DEKLSAVFPY 325

Query: 207 VVSIQPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVIL 266
            + I+PP+DE  L ++K QLE D  ++ ++ N N + +VL E+ L C DL  +  +D  +
Sbjct: 326 NIDIRPPEDETHLVSWKSQLERDMNMIQTQDNRNHIMEVLSENDLICDDLESISFEDTKV 385

Query: 267 TKQKAEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAIS------------------ 308
                E++V  A +++L +   P  +  KL +   SL    S                  
Sbjct: 386 LSNYIEEIVVSALSYHLMNNKDPEYRNGKLVISSISLSHGFSLFREGKAGGREKLKQKTK 445

Query: 309 ----------------RLKGVETMS--RQPSQSLK---------NLAKD-EFESNFISAV 340
                           + + V T+S   +P +  K          +A D EFE      V
Sbjct: 446 EESSKEVKAESIKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEV 505

Query: 341 VPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKT 400
           +P  EI V F DIGAL+++K++L ELV+LP+RRP+LFT G LL+P +GILLFGPPGTGKT
Sbjct: 506 IPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFT-GGLLKPCRGILLFGPPGTGKT 564

Query: 401 LMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGA 460
           ++AKA+A EAGA+FI+VS ST+TSKWFG+ EK  +ALF+ ASK++P IIFVDEVDS+LG 
Sbjct: 565 MLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQ 624

Query: 461 RGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDL 520
           R    EHEA R+++NEFM+ WDGL +K  +RIL+L ATNRPFDLD+A+IRR  RRI V L
Sbjct: 625 RTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGL 684

Query: 521 PDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE- 579
           P  +NR+KILR +L  E +D +  + +LA +T+GY+GSDLKNLC TAAYRPV+EL+++E 
Sbjct: 685 PAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVRELIQQER 744

Query: 580 -------------KAGDNNITN----VALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRK 622
                        KAG+ +       + LRPLN  DF ++K++V  S A +   + EL++
Sbjct: 745 IKDTEKKKQREPTKAGEEDEGKEERVITLRPLNRQDFKEAKNQVAASFAAEGAGMGELKQ 804

Query: 623 WNEMYGEGGTRTK 635
           WNE+YGEGG+R K
Sbjct: 805 WNELYGEGGSRKK 817


>At4g28000 putative protein
          Length = 726

 Score =  395 bits (1016), Expect = e-110
 Identities = 238/582 (40%), Positives = 343/582 (58%), Gaps = 80/582 (13%)

Query: 95  LAMEALREVLNS---KQPLIVYFPDGSQWLHKSVPKSIRSEFFHKV-EEMFDQLSGPIVL 150
           L +++L +VL S     P+I+Y  D        V K  +SE F+K+ + +  +LSGP+++
Sbjct: 187 LFLQSLYKVLVSISETNPIIIYLRD--------VEKLCQSERFYKLFQRLLTKLSGPVLV 238

Query: 151 ICGQNKAQSGTKEKGQFTMILPNFARLAKLPLSLKRLTDKGQKTSDDDEINKLFSNVVSI 210
           +  +                             L    D  Q+  +   I+ LF   + I
Sbjct: 239 LGSR-----------------------------LLEPEDDCQEVGEG--ISALFPYNIEI 267

Query: 211 QPPKDENLLATFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCVDLLHLDSDDVILTKQK 270
           +PP+DEN L ++K + E+D K++  + N N + +VL  + L C DL  +   D +     
Sbjct: 268 RPPEDENQLMSWKTRFEDDMKVIQFQDNKNHIAEVLAANDLECDDLGSICHADTMFLSSH 327

Query: 271 AEKVVGWAKNHYLSSCLLPCVKGDKLCLPRESLEIAISRLKG-----VETMSRQPSQSLK 325
            E++V  A +++L +   P  K  +L +   SL   ++ L+       +++    +   K
Sbjct: 328 IEEIVVSAISYHLMNNKEPEYKNGRLVISSNSLSHGLNILQEGQGCFEDSLKLDTNIDSK 387

Query: 326 NLAKD-EFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLR 384
            +A D EFE      V+P  EIGV F DIG+L++ K++L ELV+LP+RRP+LF  G LL+
Sbjct: 388 EVAPDNEFEKRIRPEVIPANEIGVTFADIGSLDETKESLQELVMLPLRRPDLFK-GGLLK 446

Query: 385 PVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKL 444
           P +GILLFGPPGTGKT+MAKA+A EAGA+FI+VS ST+TSKWFG+ EK  +ALF+ A+K+
Sbjct: 447 PCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKV 506

Query: 445 APVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDL 504
           +P IIFVDEVDS+LG R    EHEA R+++NEFM  WDGL S    RIL+L ATNRPFDL
Sbjct: 507 SPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDL 566

Query: 505 DDAVIRRLPRRIYVDLPDADNRKKILRIIL---KHENLDPDFQFDKLANLTDGYSGSDLK 561
           D+A+IRR  RRI V LP  ++R+KILR +L   K ENLD    F +LA +TDGYSGSDLK
Sbjct: 567 DEAIIRRFERRIMVGLPSVESREKILRTLLSKEKTENLD----FQELAQMTDGYSGSDLK 622

Query: 562 NLCITAAYRPVQELLEEEKAGD-----------------------NNITNVALRPLNLDD 598
           N C TAAYRPV+EL+++E   D                       +    + LRPL+++D
Sbjct: 623 NFCTTAAYRPVRELIKQECLKDQERRKREEAEKNSEEGSEAKEEVSEERGITLRPLSMED 682

Query: 599 FVQSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPFGF 640
              +KS+V  S A +   +NEL++WN++YGEGG+R K    +
Sbjct: 683 MKVAKSQVAASFAAEGAGMNELKQWNDLYGEGGSRKKEQLSY 724


>At1g62130 hypothetical protein
          Length = 372

 Score =  305 bits (780), Expect = 7e-83
 Identities = 177/398 (44%), Positives = 243/398 (60%), Gaps = 54/398 (13%)

Query: 263 DVILTKQKAEKVVGWAKNHYLSSCLLPCVKGD-KLCLPRESLEIAISRLKGVETMSRQPS 321
           D+ L +  AEK++GWA +H++ S   P    D ++ L  ESL+       G+E +  +  
Sbjct: 3   DLTLRRDSAEKIIGWALSHHIKSN--PGADPDVRVILSLESLKC------GIELLEIESK 54

Query: 322 QSLKNLAKDE-FESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHG 380
           +SLK++  +  FE   IS ++PP EIGV FDDIGALE+VK  L ELV+LP + PELF  G
Sbjct: 55  KSLKDIVTENTFE---ISDIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPELFCKG 111

Query: 381 NLLR--------------------PVKGILLFGPPGTGKTLMAKALATEAGANFISVSGS 420
            L +                    P  GILLFGP GTGKT++AKA+ATEAGAN I++S  
Sbjct: 112 QLTKMLTLWIGGFLISLLLYFSTQPCNGILLFGPSGTGKTMLAKAVATEAGANLINMS-- 169

Query: 421 TLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAA 480
              S+WF + EK  KA+FS ASK++P IIF+DEV+S+L        H    + +NEF+  
Sbjct: 170 --MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESML--------HRYRLKTKNEFIIN 219

Query: 481 WDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLD 540
           WDGLR+ E +R+L+L ATNRPFDLD+AVIRRLP R+ V LPDA +R KIL++IL  E+L 
Sbjct: 220 WDGLRTNEKERVLVLAATNRPFDLDEAVIRRLPHRLMVGLPDARSRSKILKVILSKEDLS 279

Query: 541 PDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEKAGDNNITNVALRPLNLDDFV 600
           PDF  D++A++T+GYSG+DLK      A         E +          LR L ++DF 
Sbjct: 280 PDFDIDEVASMTNGYSGNDLKERDAAVA---------EGRVPPAGSGGSDLRVLKMEDFR 330

Query: 601 QSKSKVGPSVAYDAVSVNELRKWNEMYGEGGTRTKSPF 638
            +   V  S++  +V++  LR+WNE YGEGG+R    F
Sbjct: 331 NALELVSMSISSKSVNMTALRQWNEDYGEGGSRRNESF 368


>At4g27680 unknown protein
          Length = 398

 Score =  275 bits (704), Expect = 4e-74
 Identities = 136/274 (49%), Positives = 188/274 (67%), Gaps = 1/274 (0%)

Query: 332 FESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILL 391
           +E      V+ P  I V+F  IG LE +K+AL ELVILP++RPELF +G LL P KG+LL
Sbjct: 65  YEDVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLL 124

Query: 392 FGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFV 451
           +GPPGTGKT++AKA+A E+GA FI+V  S L SKWFGDA+KL  A+FS A KL P IIF+
Sbjct: 125 YGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFI 184

Query: 452 DEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRR 511
           DEV+S LG R    +HEA   M+ EFMA WDG  +  + R+++L ATNRP +LD+A++RR
Sbjct: 185 DEVESFLGQRRST-DHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRR 243

Query: 512 LPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRP 571
           LP+   + +PD   R +IL++ LK E ++PD  FD +A L +GY+GSD+  LC  AAY P
Sbjct: 244 LPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFP 303

Query: 572 VQELLEEEKAGDNNITNVALRPLNLDDFVQSKSK 605
           ++E+L+ E+ G   +    L  L+L+  + +  K
Sbjct: 304 IREILDAERKGKPCLDPRPLSQLDLEKVLATSKK 337


>At5g53540 26S proteasome regulatory particle chain RPT6-like
           protein
          Length = 403

 Score =  273 bits (697), Expect = 3e-73
 Identities = 134/276 (48%), Positives = 189/276 (67%), Gaps = 1/276 (0%)

Query: 330 DEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGI 389
           +++E      V+ P  I V+F  IG LE +K+AL ELVILP++RPELF +G LL P KG+
Sbjct: 66  NQYEDVIACDVINPLHIDVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGV 125

Query: 390 LLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVII 449
           LL+GPPGTGKT++AKA+A E+ A FI+V  S L SKWFGDA+KL  A+FS A KL P II
Sbjct: 126 LLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAII 185

Query: 450 FVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVI 509
           F+DEVDS LG R    ++EA   M+ EFMA WDG  + +N R+++L ATNRP +LD+A++
Sbjct: 186 FIDEVDSFLGQRRST-DNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAIL 244

Query: 510 RRLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAY 569
           RR P+   + +PD   R +IL+++LK E+++ D  +D++A L + Y+GSD+  LC  AAY
Sbjct: 245 RRFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAY 304

Query: 570 RPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSK 605
            P++E+LE EK G        L  L+L+  + +  K
Sbjct: 305 FPIREILEAEKEGKRVSVPRPLTQLDLEKVLATSKK 340


>At3g27120 spastin protein, putative
          Length = 327

 Score =  229 bits (585), Expect = 3e-60
 Identities = 131/309 (42%), Positives = 190/309 (61%), Gaps = 10/309 (3%)

Query: 322 QSLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGN 381
           + L+NL     E   +S  +   +  V++DDI  LE  KK + E+VI P+ RP++F    
Sbjct: 23  EKLRNLEPRLIEH--VSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFK--G 78

Query: 382 LLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFA 441
              P KG+LLFGPPGTGKT++ KA+A EA A F  +S S+LTSKW G+ EKL +ALF  A
Sbjct: 79  CRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVA 138

Query: 442 SKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRP 501
           S   P +IFVDE+DSLL  R    EHE++RR++ +F+   +G  S   Q IL++GATNRP
Sbjct: 139 SCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQ-ILLIGATNRP 197

Query: 502 FDLDDAVIRRLPRRIYVDLPDADNRKKILRIILKHENLD--PDFQFDKLANLTDGYSGSD 559
            +LD+A  RRL +R+Y+ LP ++ R  I++ +LK + L    D   + + NLT+GYSGSD
Sbjct: 198 QELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYSGSD 257

Query: 560 LKNLCITAAYRPVQELLEEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNE 619
           +KNL   A   P++E L +      N+T   +R + L DF  +  +V PSV+ + + + E
Sbjct: 258 MKNLVKDATMGPLREAL-KRGIDITNLTKDDMRLVTLQDFKDALQEVRPSVSQNELGIYE 316

Query: 620 LRKWNEMYG 628
              WN  +G
Sbjct: 317 --NWNNQFG 323


>At1g80350 CAD ATPase (AAA1)
          Length = 523

 Score =  221 bits (564), Expect = 7e-58
 Identities = 114/291 (39%), Positives = 183/291 (62%), Gaps = 13/291 (4%)

Query: 347 GVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKAL 406
           GV++DD+  L + K+ L E V+LP+  PE F    + RP KG+L+FGPPGTGKTL+AKA+
Sbjct: 235 GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAV 292

Query: 407 ATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFE 466
           ATE G  F +VS +TL SKW G++E++ + LF  A   AP  IF+DE+DSL  +RGG+ E
Sbjct: 293 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGE 352

Query: 467 HEATRRMRNEFMAAWDGLRSKENQR------ILILGATNRPFDLDDAVIRRLPRRIYVDL 520
           HE++RR+++E +   DG+ +           +++L ATN P+D+D+A+ RRL +RIY+ L
Sbjct: 353 HESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPL 412

Query: 521 PDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELL---E 577
           PD ++RK ++ I L+   +  D   + +A  T+GYSG DL N+C  A+   ++  +    
Sbjct: 413 PDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKT 472

Query: 578 EEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYG 628
            ++  + +  +++  P+ + DF ++  KV PSV+   +  +E  KW   +G
Sbjct: 473 RDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE--KWLSEFG 521


>At2g34560 katanin like protein
          Length = 384

 Score =  207 bits (527), Expect = 1e-53
 Identities = 116/292 (39%), Positives = 177/292 (59%), Gaps = 15/292 (5%)

Query: 344 GEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMA 403
           G   +K++ I  LE+ KK L E V++P++ P  F    LL P KGILLFGPPGTGKT++A
Sbjct: 96  GNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLA 153

Query: 404 KALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARG- 462
           KA+ATE    F ++S S++ SKW GD+EKL + LF  A   AP  IF+DE+D+++  RG 
Sbjct: 154 KAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGG 213

Query: 463 -GAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLP 521
            G  EHEA+RR++ E +   DGL+ K N+ + +L ATN P++LD A++RRL +RI V LP
Sbjct: 214 EGRSEHEASRRLKTELLIQMDGLQ-KTNELVFVLAATNLPWELDAAMLRRLEKRILVPLP 272

Query: 522 DADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELL----- 576
           D + R+ +  +++  +  D     D L   ++GYSGSD++ LC  AA +P++  L     
Sbjct: 273 DPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILED 332

Query: 577 EEEKAGDNNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYG 628
            E+   ++ +  +   P+  +D  ++ S   PS    A   +   K+N+ YG
Sbjct: 333 REDVVPEDELPKIG--PILPEDIDRALSNTRPSAHLHA---HLYDKFNDDYG 379


>At2g27600 putative AAA-type ATPase
          Length = 435

 Score =  194 bits (492), Expect = 2e-49
 Identities = 102/230 (44%), Positives = 147/230 (63%), Gaps = 8/230 (3%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           +K+ D+  LE  K+AL E VILP++ P+ FT     RP +  LL+GPPGTGK+ +AKA+A
Sbjct: 129 IKWSDVAGLESAKQALQEAVILPVKFPQFFTGKR--RPWRAFLLYGPPGTGKSYLAKAVA 186

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEH 467
           TEA + F SVS S L SKW G++EKL   LF  A + AP IIFVDE+DSL G RG   E 
Sbjct: 187 TEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNES 246

Query: 468 EATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRK 527
           EA+RR++ E +    G+    ++++L+L ATN P+ LD A+ RR  +RIY+ LP+A  R+
Sbjct: 247 EASRRIKTELLVQMQGV-GHNDEKVLVLAATNTPYALDQAIRRRFDKRIYIPLPEAKARQ 305

Query: 528 KILRIIL---KHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQE 574
            + ++ L    H   +PDF++  L   T+G+SGSD+        + PV++
Sbjct: 306 HMFKVHLGDTPHNLTEPDFEY--LGQKTEGFSGSDVSVCVKDVLFEPVRK 353


>At3g01610 putative cell division control protein
          Length = 703

 Score =  178 bits (452), Expect = 7e-45
 Identities = 103/280 (36%), Positives = 167/280 (58%), Gaps = 18/280 (6%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           VK+DD+G L+ ++   N  ++ P+++P+++    +     G LL+GPPG GKTL+AKA A
Sbjct: 408 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLET-GFLLYGPPGCGKTLIAKAAA 466

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARG--GAF 465
            EAGANF+ + G+ L +K+ G++E   + LF  A   AP +IF DEVD+L  +RG  GA+
Sbjct: 467 NEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAW 526

Query: 466 EHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDA 523
                 R+ N+F+   DG    E + + ++GATNRP  +D A +R  R    +YV LP+A
Sbjct: 527 ---VVERLLNQFLVELDG---GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNA 580

Query: 524 DNRKKILRIILKHENLDPDFQFDKLA-NLTDGYSGSDLKNLCITAAYRPVQELLEEEKAG 582
           D R  IL+ I + + +DP    D +A N  +G+SG+DL +L   A ++ V+E++   ++ 
Sbjct: 581 DERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESS 640

Query: 583 DNNITNVALRPLNLDDFVQSKSKVGPSV------AYDAVS 616
           ++++T++    +    F Q+ S V PSV       YDA+S
Sbjct: 641 EDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALS 680



 Score =  140 bits (352), Expect = 3e-33
 Identities = 101/348 (29%), Positives = 175/348 (50%), Gaps = 34/348 (9%)

Query: 313 VETMSRQPSQSLKNLA--KDEFESNFISAVVPPGEIGVK------FDDIGALEDVKKALN 364
           VET+S +    L  +   K+   S  +S     G++ V+      F D G ++ +   L 
Sbjct: 70  VETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILDELE 129

Query: 365 ELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTS 424
             V+ P+  PE F    + +P  GIL  GPPG GKT +A A+A EAG  F  +S + + S
Sbjct: 130 MNVLFPILNPEPFKKIGV-KPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVIS 188

Query: 425 KWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGL 484
              G +E+  + LFS A + AP I+F+DE+D+ +G++    + E  +R+  + +   DG 
Sbjct: 189 GVSGASEENIRELFSKAYRTAPSIVFIDEIDA-IGSKRENQQREMEKRIVTQLLTCMDGP 247

Query: 485 RSKENQR--------ILILGATNRPFDLDDAVIR--RLPRRIYVDLPDADNRKKILRIIL 534
            +K ++         +L++GATNRP  LD A+ R  R    I +  PD D R +IL ++ 
Sbjct: 248 GNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVA 307

Query: 535 KHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLE---EEKAGDNNITNVAL 591
           +   L+  F   ++A LT G+ G+DL+++   A  + ++ +L+    E++GD       L
Sbjct: 308 QKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWL 367

Query: 592 RP-----------LNLDDFVQSKSKVGPSVAYDAVSVNELRKWNEMYG 628
           R            + + DF ++ + V  S+  +  S+    KW+++ G
Sbjct: 368 RMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGG 415


>At3g09840 putative transitional endoplasmic reticulum ATPase
          Length = 809

 Score =  175 bits (443), Expect = 8e-44
 Identities = 95/237 (40%), Positives = 142/237 (59%), Gaps = 8/237 (3%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           V ++DIG LE+VK+ L E V  P+  PE F    +  P KG+L +GPPG GKTL+AKA+A
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIA 535

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEH 467
            E  ANFISV G  L + WFG++E   + +F  A + AP ++F DE+DS+   RGG    
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGG 595

Query: 468 E---ATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPD 522
           +   A  R+ N+ +   DG+ +K+   + I+GATNRP  +D A++R  RL + IY+ LPD
Sbjct: 596 DGGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 653

Query: 523 ADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE 579
            D+R  I +  L+   +  D     LA  T G+SG+D+  +C  A    ++E +E++
Sbjct: 654 EDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKD 710



 Score =  166 bits (420), Expect = 4e-41
 Identities = 137/432 (31%), Positives = 208/432 (47%), Gaps = 33/432 (7%)

Query: 214 KDENLLATFKKQLEED--RKIVISRSNLN-ELRKVLEEHQLSCVDLLHLDSDDVILTKQK 270
           KD   +A   +  EE   R   + RSNL   L  V+  HQ  C D+ +     ++     
Sbjct: 69  KDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQ--CPDVKYGKRVHILPVDDT 126

Query: 271 AEKVVGWAKNHYLSSCLL----PCVKGDKLCLPR---ESLEIAISRLKGVETMSRQPSQS 323
            E V G   + YL    L    P  KGD L L R    S+E  +      E     P   
Sbjct: 127 VEGVTGNLFDAYLKPYFLEAYRPVRKGD-LFLVRGGMRSVEFKVIETDPAEYCVVAPDTE 185

Query: 324 L---KNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHG 380
           +       K E E              V +DD+G +      + ELV LP+R P+LF   
Sbjct: 186 IFCEGEPVKREDEERLDD---------VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI 236

Query: 381 NLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSF 440
            + +P KGILL+GPPG+GKTL+A+A+A E GA F  ++G  + SK  G++E   +  F  
Sbjct: 237 GV-KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEE 295

Query: 441 ASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNR 500
           A K AP IIF+DE+DS+   R      E  RR+ ++ +   DGL+S+ +  ++++GATNR
Sbjct: 296 AEKNAPSIIFIDEIDSIAPKREKT-NGEVERRIVSQLLTLMDGLKSRAH--VIVMGATNR 352

Query: 501 PFDLDDAVIR--RLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGS 558
           P  +D A+ R  R  R I + +PD   R ++LRI  K+  L  D   ++++  T GY G+
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGA 412

Query: 559 DLKNLCITAAYRPVQELLEEEKAGDNNITNVALRPLNL--DDFVQSKSKVGPSVAYDAVS 616
           DL  LC  AA + ++E ++     D++I    L  + +  + F  +     PS   + V 
Sbjct: 413 DLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVV 472

Query: 617 VNELRKWNEMYG 628
                 WN++ G
Sbjct: 473 EVPNVSWNDIGG 484


>At5g03340 transitional endoplasmic reticulum ATPase
          Length = 810

 Score =  172 bits (436), Expect = 5e-43
 Identities = 94/236 (39%), Positives = 141/236 (58%), Gaps = 7/236 (2%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           V ++DIG LE+VK+ L E V  P+  PE F    +  P KG+L +GPPG GKTL+AKA+A
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIA 535

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEH 467
            E  ANFISV G  L + WFG++E   + +F  A + AP ++F DE+DS+   RG +   
Sbjct: 536 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGD 595

Query: 468 E--ATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDA 523
              A  R+ N+ +   DG+ +K+   + I+GATNRP  +D A++R  RL + IY+ LPD 
Sbjct: 596 AGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE 653

Query: 524 DNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE 579
           D+R  I +  L+   +  D     LA  T G+SG+D+  +C  A    ++E +E++
Sbjct: 654 DSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKD 709



 Score =  165 bits (417), Expect = 8e-41
 Identities = 137/432 (31%), Positives = 209/432 (47%), Gaps = 33/432 (7%)

Query: 214 KDENLLATFKKQLEED--RKIVISRSNLN-ELRKVLEEHQLSCVDLLHLDSDDVILTKQK 270
           KD   +A   +  EE   R   + RSNL   L  V+  HQ  C D+ +     ++     
Sbjct: 69  KDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQ--CPDVKYGKRVHILPVDDT 126

Query: 271 AEKVVGWAKNHYLSSCLL----PCVKGDKLCLPR---ESLEIAISRLKGVETMSRQPSQS 323
            E V G   + YL    L    P  KGD L L R    S+E  +      E     P   
Sbjct: 127 VEGVTGNLFDAYLKPYFLEAYRPVRKGD-LFLVRGGMRSVEFKVIETDPAEYCVVAPDTE 185

Query: 324 L---KNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHG 380
           +       K E E           E+G  +DD+G +      + ELV LP+R P+LF   
Sbjct: 186 IFCEGEPVKREDEERL-------DEVG--YDDVGGVRKQMAQIRELVELPLRHPQLFKSI 236

Query: 381 NLLRPVKGILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSF 440
            + +P KGILL+GPPG+GKTL+A+A+A E GA F  ++G  + SK  G++E   +  F  
Sbjct: 237 GV-KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEE 295

Query: 441 ASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNR 500
           A K AP IIF+DE+DS+   R      E  RR+ ++ +   DGL+S+ +  ++++GATNR
Sbjct: 296 AEKNAPSIIFIDEIDSIAPKREKT-NGEVERRIVSQLLTLMDGLKSRAH--VIVMGATNR 352

Query: 501 PFDLDDAVIR--RLPRRIYVDLPDADNRKKILRIILKHENLDPDFQFDKLANLTDGYSGS 558
           P  +D A+ R  R  R I + +PD   R ++LRI  K+  L  D   ++++  T GY G+
Sbjct: 353 PNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGA 412

Query: 559 DLKNLCITAAYRPVQELLEEEKAGDNNITNVALRPLNL--DDFVQSKSKVGPSVAYDAVS 616
           DL  LC  AA + ++E ++     D++I    L  + +  + F  +     PS   + V 
Sbjct: 413 DLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVV 472

Query: 617 VNELRKWNEMYG 628
                 W ++ G
Sbjct: 473 EVPNVSWEDIGG 484


>At3g53230 CDC48 - like protein
          Length = 815

 Score =  169 bits (428), Expect = 4e-42
 Identities = 91/236 (38%), Positives = 142/236 (59%), Gaps = 7/236 (2%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           V ++DIG LE+VK+ L E V  P+  PE F    +  P KG+L +GPPG GKTL+AKA+A
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGM-SPSKGVLFYGPPGCGKTLLAKAIA 536

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEH 467
            E  ANFIS+ G  L + WFG++E   + +F  A + AP ++F DE+DS+   RG +   
Sbjct: 537 NECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGD 596

Query: 468 E--ATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDA 523
              A  R+ N+ +   DG+ +K+   + I+GATNRP  +D A++R  RL + IY+ LPD 
Sbjct: 597 AGGAADRVLNQLLTEMDGMNAKKT--VFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 654

Query: 524 DNRKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEE 579
           ++R +I +  L+   +  D     LA  T G+SG+D+  +C  +    ++E +E++
Sbjct: 655 ESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKD 710



 Score =  164 bits (416), Expect = 1e-40
 Identities = 101/285 (35%), Positives = 157/285 (54%), Gaps = 8/285 (2%)

Query: 348 VKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVKGILLFGPPGTGKTLMAKALA 407
           V +DD+G +      + ELV LP+R P+LF    + +P KGILL+GPPG+GKTL+A+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV-KPPKGILLYGPPGSGKTLIARAVA 263

Query: 408 TEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEH 467
            E GA F  ++G  + SK  G++E   +  F  A K AP IIF+DE+DS+   R      
Sbjct: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-HG 322

Query: 468 EATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDADN 525
           E  RR+ ++ +   DGL+S+ +  ++++GATNRP  +D A+ R  R  R I + +PD   
Sbjct: 323 EVERRIVSQLLTLMDGLKSRAH--VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 380

Query: 526 RKKILRIILKHENLDPDFQFDKLANLTDGYSGSDLKNLCITAAYRPVQELLEEEKAGDNN 585
           R ++LRI  K+  L  D   ++++  T GY G+DL  LC  AA + ++E ++     D  
Sbjct: 381 RLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEE 440

Query: 586 ITNVALRPLNL--DDFVQSKSKVGPSVAYDAVSVNELRKWNEMYG 628
           I    L  + +  D F  +     PS   + V       W ++ G
Sbjct: 441 IDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGG 485


>At2g45500 hypothetical protein
          Length = 481

 Score =  168 bits (425), Expect = 1e-41
 Identities = 115/307 (37%), Positives = 167/307 (53%), Gaps = 67/307 (21%)

Query: 317 SRQPSQSLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPEL 376
           S +P +   N+  D+     I+  +      VK+DD+  L   K+AL E+VILP +R +L
Sbjct: 183 SPKPVKESGNVYDDKLVE-MINTTIVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDL 241

Query: 377 FTHGNLLRPVK-----GILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAE 431
           FT   L RP +     G+LLFGPPG GKT++AKA+A+E+ A F +VS S+LTSKW     
Sbjct: 242 FT--GLRRPARVTSLLGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTSKW----- 294

Query: 432 KLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQR 491
                                 +DS++  R  + E+EA+RR+++EF+  +DG+ S  +  
Sbjct: 295 ----------------------IDSIMSTRSTS-ENEASRRLKSEFLIQFDGVTSNPDDL 331

Query: 492 ILILGATNRPFDLDDAVIRRLPRRIYVDLPDADNRKKILRIILK---HENLDPDFQFDKL 548
           ++I+GATN+P +LDDAV+RRL +RIYV LPD++ RK + +  LK   H   D D   DK+
Sbjct: 332 VIIIGATNKPQELDDAVLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGD--IDKI 389

Query: 549 ANLTDG--------------------YSGSDLKNLCITAAYRPVQELLEEEKAGDNNITN 588
              T+G                    YSGSDL+ LC  AA  P++EL      G N +T 
Sbjct: 390 VKETEGKLYRLCIKKHRFISQVTDKRYSGSDLQALCEEAAMMPIREL------GANILTI 443

Query: 589 VALRPLN 595
            A + LN
Sbjct: 444 QANKVLN 450


>At1g03000 putative peroxisome assembly factor-2
          Length = 941

 Score =  161 bits (407), Expect = 1e-39
 Identities = 105/306 (34%), Positives = 175/306 (56%), Gaps = 21/306 (6%)

Query: 328 AKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFTHGNLLRPVK 387
           A D  +    SA+  P    VK+DD+G LEDVK ++ + V LP+   +LF+ G  LR   
Sbjct: 635 ALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSG--LRKRS 692

Query: 388 GILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPV 447
           G+LL+GPPGTGKTL+AKA+ATE   NF+SV G  L + + G++EK  + +F  A    P 
Sbjct: 693 GVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPC 752

Query: 448 IIFVDEVDSLLGARGGAFEHEATR-RMRNEFMAAWDGLRSKENQRILILGATNRPFDLDD 506
           +IF DE+DSL  ARG + +      R+ ++ +A  DGL S  +Q + I+GA+NRP  +D 
Sbjct: 753 VIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL-SDSSQDLFIIGASNRPDLIDP 811

Query: 507 AVIR--RLPRRIYVDL-PDADNRKKILRIILKHENLDPDFQFDKLA-NLTDGYSGSDLKN 562
           A++R  R  + +YV +  DA  R+++L+ + +   L  D     +A      ++G+D+  
Sbjct: 812 ALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYA 871

Query: 563 LCITAAYRPVQELLEEEKAGD-----NNITNVALRPLNLDDFVQSKSKVGPSVAYDAVSV 617
           LC  A ++  +  + +  +GD     ++  +V +  +   DF+++  ++ PS     +S+
Sbjct: 872 LCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYV---DFIKAMDQLSPS-----LSI 923

Query: 618 NELRKW 623
            EL+K+
Sbjct: 924 TELKKY 929



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 389 ILLFGPPGTGKTLMAKALATEAGANFISVSGSTLTSKWFGDAEKLTKALFSFASKLAPVI 448
           +LL G PG GK  + K +A   G + +  S  +L +             F+ A + +P I
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTI 439

Query: 449 IFVDEVDSL--LGARGGA 464
           + +   D    LG++ G+
Sbjct: 440 LLLRHFDVFKNLGSQDGS 457


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.318    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,968,656
Number of Sequences: 26719
Number of extensions: 666820
Number of successful extensions: 2407
Number of sequences better than 10.0: 158
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2043
Number of HSP's gapped (non-prelim): 224
length of query: 645
length of database: 11,318,596
effective HSP length: 106
effective length of query: 539
effective length of database: 8,486,382
effective search space: 4574159898
effective search space used: 4574159898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)