BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.20
(1583 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 713 0.0
At1g58140 hypothetical protein 711 0.0
At1g48710 hypothetical protein 709 0.0
At3g60170 putative protein 699 0.0
At2g15650 putative retroelement pol polyprotein 657 0.0
At1g32590 hypothetical protein, 5' partial 615 e-176
At3g25450 hypothetical protein 593 e-169
At3g59720 copia-type reverse transcriptase-like protein 591 e-168
At2g16000 putative retroelement pol polyprotein 583 e-166
At2g20460 putative retroelement pol polyprotein 582 e-166
At2g05390 putative retroelement pol polyprotein 558 e-158
At1g70010 hypothetical protein 541 e-154
At1g37110 522 e-148
At4g17450 retrotransposon like protein 495 e-140
At4g21360 putative transposable element 447 e-125
At1g59265 polyprotein, putative 369 e-102
At1g58889 polyprotein, putative 367 e-101
At4g27210 putative protein 364 e-100
At4g10690 retrotransposon like protein 364 e-100
At1g53810 363 e-100
>At3g61330 copia-type polyprotein
Length = 1352
Score = 713 bits (1841), Expect = 0.0
Identities = 393/1024 (38%), Positives = 573/1024 (55%), Gaps = 43/1024 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV----DNSPC 623
++ WYLDSG S HM G + MF EL G V G K ++ G G I + +
Sbjct: 331 ENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQF 390
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV + + N+LS+ QL +KGYDI D ++ + N K+ +S
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLK----------DNNLSIRDQESNLITKVPMS 440
Query: 684 E-------LETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSD 729
+ + +CL + EE W+WH R GH + +S+ ++VRGLP + +
Sbjct: 441 KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ 500
Query: 730 ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCW 789
+CE C GK K+ F ++ +PLEL+H D+ G +K +S+G Y ++ +DD+S
Sbjct: 501 -VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 790 TWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDF 849
TWV FL K E +F F A V+ E G I +RSD GGEF + +F + GI
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 850 SCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKT 909
+ PR+ QQNGV+ERKNRT+ EMAR+ML+ + K WAEAV Y+ NR + + KT
Sbjct: 620 TVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 910 PYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDA 969
P E W KP S+ FG + +A ++ K D KS K + +GY + SKG+++YN D
Sbjct: 680 PQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 970 KTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQ 1028
K ++ FD++ + D + E + D+ + E P EE + + SQ
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQ 799
Query: 1029 PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSE-ETLLSLKGLVSLIEPKSIDEALQDK 1087
++ S + + + + +E + L+L L + EP +A++ K
Sbjct: 800 IEESSSERTPRFRSI-----------QELYEVTENQENLTLFCLFAECEPMDFQKAIEKK 848
Query: 1088 DWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNS 1147
W M+EE+ KND W L P G +G KWV++ K N KG+V R KARLVA+G S
Sbjct: 849 TWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 908
Query: 1148 QQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGF 1207
Q+ GIDY E FA VARLE +RL+IS + + +HQMDVKSAFLNG + EEVY+ QP G+
Sbjct: 909 QRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 1208 EDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IK 1267
+ D V +LKK LYGLKQAPRAW R+ + + +F++ + L+ K K+DI I
Sbjct: 969 IVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 1268 QIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTK 1327
+YVDD+IF NPS+ +EF + M E EM+ +G + Y+LGI+V Q+ +I Q Y K
Sbjct: 1029 CLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 1328 ELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVH 1387
E+LKKF + S TPM L K++ V ++ ++GSL YLT +RPDIL++V
Sbjct: 1089 EVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 1388 LCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKST 1447
+ +R+ P TH A KRI RY+KGT N GL Y TS+YKL GY D+D+ GD +RKST
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKST 1208
Query: 1448 SGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI-LESNIP 1506
SG ++G +W SK+Q I+ LS EAEY++A C +W ++ L++ + E
Sbjct: 1209 SGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTK 1268
Query: 1507 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLA 1566
I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K + L++V T Q A+ FTKPL
Sbjct: 1269 IFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLK 1328
Query: 1567 DDRF 1570
+ F
Sbjct: 1329 RENF 1332
>At1g58140 hypothetical protein
Length = 1320
Score = 711 bits (1836), Expect = 0.0
Identities = 393/1023 (38%), Positives = 562/1023 (54%), Gaps = 73/1023 (7%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV----DNSPC 623
++ WYLDSG S HM G + MF EL G V G K ++ G G I + +
Sbjct: 331 ENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQF 390
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV + + N+LS+ QL +KGYDI D ++ + N K+ +S
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLK----------DNNLSIRDQESNLITKVPMS 440
Query: 684 E-------LETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSD 729
+ + +CL + EE W+WH R GH + +S+ ++VRGLP + +
Sbjct: 441 KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ 500
Query: 730 ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCW 789
+CE C GK K+ F ++ +PLEL+H D+ G +K +S+G Y ++ +DD+S
Sbjct: 501 -VCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 790 TWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDF 849
TWV FL K E +F F A V+ E G I +RSD GGEF + +F + GI
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 850 SCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKT 909
+ PR+ QQNGV ERKNRT+ EMAR+ML+ + K WAEAV Y+ NR + + KT
Sbjct: 620 TVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 910 PYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDA 969
P E W KP S+ FG + +A ++ K D KS K + +GY + SKG+++YN D
Sbjct: 680 PQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 970 KTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQ 1028
K ++ FD++ + D + E + DK + E P EE + + SQ
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQ 799
Query: 1029 PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQDKD 1088
++K EP EA++ K
Sbjct: 800 IEEKC------------------------------------------EPMDFQEAIEKKT 817
Query: 1089 WILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQ 1148
W M+EE+ KND W L P G +G KWV++ K N KG+V R KARLVA+G SQ
Sbjct: 818 WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQ 877
Query: 1149 QEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFE 1208
+ GIDY E FA VARLE +RL+IS + + +HQMDVKSAFLNG + EEVY+ QP G+
Sbjct: 878 RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 937
Query: 1209 DEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQ 1268
+ D V +LKK+LYGLKQAPRAW R+ + + +F++ + L+ K K+DI I
Sbjct: 938 VKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIAC 997
Query: 1269 IYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKE 1328
+YVDD+IF NPS+ +EF + M E EM+ +G + Y+LGI+V Q+ +I Q Y KE
Sbjct: 998 LYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKE 1057
Query: 1329 LLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHL 1388
+LKKF M S TPM L K++ V ++ ++GSL YLT +RPDIL++V +
Sbjct: 1058 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1117
Query: 1389 CARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTS 1448
+R+ P TH A KRI RY+KGT N GL Y TS+YKL GY D+D+ GD +RKSTS
Sbjct: 1118 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1177
Query: 1449 GNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI-LESNIPI 1507
G ++G +W SK+Q I+ LS EAEY++A C +W ++ L++ + E I
Sbjct: 1178 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1237
Query: 1508 YCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLAD 1567
+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K + L++V T Q A+IFTKPL
Sbjct: 1238 FVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKR 1297
Query: 1568 DRF 1570
+ F
Sbjct: 1298 EDF 1300
>At1g48710 hypothetical protein
Length = 1352
Score = 709 bits (1829), Expect = 0.0
Identities = 393/1024 (38%), Positives = 571/1024 (55%), Gaps = 43/1024 (4%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV----DNSPC 623
++ WYLDSG S HM G + MF EL G V G K ++ G G I + +
Sbjct: 331 ENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQF 390
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV + + N+LS+ QL +KGYDI D ++ + N K+ +S
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLK----------DNNLSIRDQESNLITKVPMS 440
Query: 684 E-------LETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSD 729
+ + +CL + EE W+WH R GH + +S+ ++VRGLP + +
Sbjct: 441 KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ 500
Query: 730 ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCW 789
+CE C GK K+ F ++ + LEL+H D+ G +K +S+G Y ++ +DD+S
Sbjct: 501 -VCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 790 TWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDF 849
TWV FL K E +F F A V+ E G I +RSD GGEF + +F + GI
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQL 619
Query: 850 SCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKT 909
+ PR+ QQNGV ERKNRT+ EMAR+ML+ + K WAEAV Y+ NR + + KT
Sbjct: 620 TVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 910 PYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDA 969
P E W K S+ FG + +A ++ K D KS K + +GY + SKG+++YN D
Sbjct: 680 PQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 970 KTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQ 1028
K ++ FD++ + D + E + D+ + E P EE + + SQ
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQ 799
Query: 1029 PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSE-ETLLSLKGLVSLIEPKSIDEALQDK 1087
++ S + + + + +E + L+L L + EP EA++ K
Sbjct: 800 IEESSSERTPRFRSI-----------QELYEVTENQENLTLFCLFAECEPMDFQEAIEKK 848
Query: 1088 DWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNS 1147
W M+EE+ KND W L P G +G KWV++ K N KG+V R KARLVA+G
Sbjct: 849 TWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYI 908
Query: 1148 QQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGF 1207
Q+ GIDY E FA VARLE +RL+IS + + +HQMDVKSAFLNG + EEVY+ QP G+
Sbjct: 909 QRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 1208 EDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IK 1267
+ D V +LKK+LYGLKQAPRAW R+ + + +F++ + L+ K K+DI I
Sbjct: 969 IVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 1268 QIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTK 1327
+YVDD+IF NPS+ +EF + M E EM+ +G + Y+LGI+V Q+ +I Q Y K
Sbjct: 1029 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 1328 ELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVH 1387
E+LKKF M S TPM L K++ V ++ ++GSL YLT +RPDIL++V
Sbjct: 1089 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 1388 LCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKST 1447
+ +R+ P TH A KRI RY+KGT N GL Y TS+YKL GY D+D+ GD +RKST
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKST 1208
Query: 1448 SGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI-LESNIP 1506
SG ++G +W SK+Q I+ LS EAEY++A C +W ++ L++ + E
Sbjct: 1209 SGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTK 1268
Query: 1507 IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLA 1566
I+ DN +AI+L+KNP+ H R+KHI+ +YH+IR+ V K + L++V T Q A+IFTKPL
Sbjct: 1269 IFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLK 1328
Query: 1567 DDRF 1570
+ F
Sbjct: 1329 REDF 1332
>At3g60170 putative protein
Length = 1339
Score = 699 bits (1804), Expect = 0.0
Identities = 405/1040 (38%), Positives = 588/1040 (55%), Gaps = 31/1040 (2%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNS---PCI 624
+ + W+LDSGCS HMTG + F EL+ V G + + +VG G++ V + I
Sbjct: 296 RDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVI 355
Query: 625 DNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSE 684
V V L +NLLS+ QL ++G I+ +C+ G+++ + N + + S+
Sbjct: 356 PEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASK 415
Query: 685 LETQKVKCLLS---VNEEQWVWHRRLGHASMSKLDL------VRGLPTLKFSSDALCEAC 735
+ + CL + +++E +WH R GH + L L V GLP LK + + +C C
Sbjct: 416 PQKNSL-CLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKE-ICAIC 473
Query: 736 QKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFL 795
GK + K +S L+L+H D+ G + S GKRY + +DD++ TWV FL
Sbjct: 474 LTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFL 533
Query: 796 SRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTH 855
K E+ + F F A V+ E G + +R+D GGEF +++F S+GI+ + T
Sbjct: 534 HEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTP 593
Query: 856 QQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWK 915
QQNGV ERKNRT+ R+ML E + K FW+EA + +IQNR + TP E W
Sbjct: 594 QQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWS 653
Query: 916 KIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEEC 975
KP YF FGC+ Y + K D KS KC+ LG S+ SK +R+Y+ K I
Sbjct: 654 GRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVIS 713
Query: 976 IHVRFDD--KLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQPQKK 1032
V FD+ D DQ+ + K + D K E EP S VG SD+
Sbjct: 714 KDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVG-SDNNVSSS 772
Query: 1033 SRIVASHPKELILGIK----DEPV*TRSAFRPSE----ETLLSLKGLVSLIE--PKSIDE 1082
+ S P + K P + + E E LS+ L+ + E P D+
Sbjct: 773 PILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDD 832
Query: 1083 ALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLV 1142
A++DK W ME E+ KN+ W L P+G +G KWV++ KLNE G+V + KARLV
Sbjct: 833 AVKDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLV 892
Query: 1143 AQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVH 1202
A+G +Q GIDYTE FA VARL+ +R +++ S N + Q+DVKSAFL+G + EEVYV
Sbjct: 893 AKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVR 952
Query: 1203 QPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKD 1262
QP GF E + V+KL+K+LYGLKQAPRAWY R+ ++ L EF R + TLF KT
Sbjct: 953 QPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVG 1012
Query: 1263 DI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQ 1322
+I I +YVDD+IF ++ ++C EF + M E EMS +G++K+FLGI+V Q +I Q
Sbjct: 1013 NILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQ 1072
Query: 1323 SKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDI 1382
+Y +E+L +F M +S K P+ P L K++ KV + +++ ++GSL+YLT +RPD+
Sbjct: 1073 RRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDL 1132
Query: 1383 LFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMY--KKTSEYKLSGYCDADYAGD 1440
++ V L +RF S+PR +H A KRI RYLKGT LG+ Y +K KL + D+DYAGD
Sbjct: 1133 MYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGD 1192
Query: 1441 RTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI 1500
+R+STSG + S + WASK+Q ++ALS EAEYI+AA C+ Q +W + LE
Sbjct: 1193 LNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGA 1252
Query: 1501 LE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWAN 1559
E S I CDN++ I LSK+P+LH ++KHIEV++H++RD V V+ L++ T+ Q A+
Sbjct: 1253 EEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVAD 1312
Query: 1560 IFTKPLADDRFNFILKNLNM 1579
IFTKPL ++F + L M
Sbjct: 1313 IFTKPLKLEQFEKLRALLGM 1332
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 657 bits (1696), Expect = 0.0
Identities = 376/1039 (36%), Positives = 573/1039 (54%), Gaps = 43/1039 (4%)
Query: 567 LKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV---DNSPC 623
L+ W +DSGC+ HMT E R F + + + G G I V
Sbjct: 321 LREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRI 380
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV LV GL NLLS+ Q+ GY + F K C + +G + N + + ++KI+LS
Sbjct: 381 IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC-IIQDANGKEIMNIEMTDKSFKIKLS 439
Query: 684 ELETQKVKCLLSVNEEQWVWHRRLGHASMSKL------DLVRGLPTLKFSSDALCEACQK 737
+E + + + E WH+RLGH S +L +LV GLP K + + C+AC
Sbjct: 440 SVEEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNL 495
Query: 738 GKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSR 797
GK ++ F ++ T LE++H D+ G ++ +SI G RY ++ +DDY+ WV FL +
Sbjct: 496 GKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQ 555
Query: 798 KDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQ 857
K E+ + F F A V+ + C I +R E + GI + P + QQ
Sbjct: 556 KSETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQ 605
Query: 858 NGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNK-TPYELWKK 916
NG ERKNR+L EMAR+ML E D+ WAEAV T+ Y+QNR+ + I + TP E W
Sbjct: 606 NGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCG 665
Query: 917 IKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECI 976
KPN S+ FG +CY + K D+K+ +L+GYS+++KG+R++ + + +E
Sbjct: 666 HKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSR 725
Query: 977 HVRF--DDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQKKSR 1034
V F D K D D+ + V+K MSIN + + +E + S + ++ + + S
Sbjct: 726 DVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSH 785
Query: 1035 IVASHPKELILGIKDEPV*TRSAFR-----PSEETLLSLKG----LVSLIEPKSIDEALQ 1085
+++ + + P +S P E + +G LV+ EP++ DEA
Sbjct: 786 VLSQVNDQEERETSESPKKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARG 845
Query: 1086 DKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQG 1145
DK+W M EE+ KN W LV KP+ +++ KW+++ K + G+ V++KARLVA+G
Sbjct: 846 DKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARG 905
Query: 1146 NSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPP 1205
SQ+ GIDY ETFA V+R + IR L++++ ++QMDVKSAFLNG + EEVYV QPP
Sbjct: 906 FSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPP 965
Query: 1206 GFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI* 1265
GF E + V +L K+LYGLKQAPRAWY R+ S+ + N F R D L+ K +D+
Sbjct: 966 GFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVL 1025
Query: 1266 IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKY 1325
I +YVDD+I N L F + M+ E EM+ +G L YFLG++V+Q ++ Q KY
Sbjct: 1026 IVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKY 1085
Query: 1326 TKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGK----VCQKIYRGMIGSLLYLTASRPD 1381
+L+ KF MK+S TP+ P +++ V G YR ++G LLYL ASRPD
Sbjct: 1086 ANKLIDKFGMKESKSVSTPLTPQG--KRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPD 1143
Query: 1382 ILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDR 1441
++++ +R+ S P H KR+ RY+KGT+N G+++ +L GY D+D+ G
Sbjct: 1144 VMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSL 1203
Query: 1442 TERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQI- 1500
++KST+G LG + W S +Q +A S AEAEYI+ + Q +W + ED+ +
Sbjct: 1204 EDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLK 1263
Query: 1501 LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANI 1560
+ IPI CDN +AI++ +NP+ H R KHIE+KYHF+R+ KG++ L++ + Q A++
Sbjct: 1264 FKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADV 1323
Query: 1561 FTKPLADDRFNFILKNLNM 1579
TK L+ RF + + L +
Sbjct: 1324 LTKALSVSRFEGLRRKLGV 1342
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 615 bits (1585), Expect = e-176
Identities = 357/1040 (34%), Positives = 550/1040 (52%), Gaps = 57/1040 (5%)
Query: 556 LSILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGT 615
L + + I + Q W+LDSGCS HM G R F EL V G + + + G G
Sbjct: 242 LLMAHVEQIGDEEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGK 301
Query: 616 IGVD---NSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSK 672
+ ++ I +V V GL +NL S+ QL KG I C + ++ +S
Sbjct: 302 LRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHST 361
Query: 673 RRNNTYKIRLSEL----ETQKVKCLLSVNEEQWVWHRRLGHA------SMSKLDLVRGLP 722
N + + + ET++ +CL + + +WH+R GH S+++ ++V+GLP
Sbjct: 362 MTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLP 421
Query: 723 TLKFSSD-ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMV 781
+ A+C+ C KGK + ++ +++ L+L+H D+ G + S GKRY +
Sbjct: 422 KFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILN 481
Query: 782 IVDDYSCWTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFD 841
+DD+S W LS K E+ F F A+V+ E G +++ +RSD GGE+ + +F+
Sbjct: 482 FIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCK 541
Query: 842 SYGIAHDFSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRIS 901
+GI + T QQNGV ERKNR++ M R ML E + + FW EAV YI NR
Sbjct: 542 EFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSP 601
Query: 902 IRPILNKTPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKG 961
+ + + TP E W KP+ + FG + YAL + K D KS KC++ G S SK
Sbjct: 602 SKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKA 661
Query: 962 FRIYNTDAKTIEECIHVRFDDKLD---SDQSKLVEKFADMSINVSDKGKAPE-----EAE 1013
+R+Y+ I V+FD++ D+S E D S + + PE + +
Sbjct: 662 YRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQD 721
Query: 1014 PEEDSLEEVGLSDSQPQKKSRIVAS--HPKELILGIKDEPV*TRSAFRPSEETLLSLKGL 1071
EE EE ++++ Q + ++ + +KD V +E L
Sbjct: 722 QEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALF 781
Query: 1072 VSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEK 1131
+ +P +EA Q + W ME E+ +N+ W LV+ P+ ++G KW+F+ K NEK
Sbjct: 782 IGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEK 841
Query: 1132 GDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFL 1191
G+V + KARLVA+G Q+ G+D+ E FA VA+ + IRL++ + V Q+DVKSAFL
Sbjct: 842 GEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFL 901
Query: 1192 NGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKV 1251
+G + E+V+V QP GFE E+ V+KLKK+LYGLKQAPRAWY R+ F F +
Sbjct: 902 HGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYC 961
Query: 1252 DTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQV 1311
+ TLF K + D + +YVDD+I+ ++ + + F M E M+ +G++KYFLG++V
Sbjct: 962 EHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEV 1021
Query: 1312 DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGS 1371
Q +I+Q KY E++KK+ M+ K P+ P L K +G V
Sbjct: 1022 IQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK---AGAV----------- 1067
Query: 1372 LLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSG 1431
+R+ P E HL AVKRI RY++GT +LG+ Y++ +L G
Sbjct: 1068 ------------------SRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVG 1109
Query: 1432 YCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWT 1491
+ D+DYAGD +RKSTSG LG ++WASK+Q I+ LS EAE++SA+ + Q +W
Sbjct: 1110 FVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWL 1169
Query: 1492 KHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKF 1550
++ LE+ E ++CDN++ I LSKNP+LH R+KHI V+YHF+R+ V +G + L +
Sbjct: 1170 RNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDY 1229
Query: 1551 VDTDHQWANIFTKPLADDRF 1570
T Q A+I TK + + F
Sbjct: 1230 CTTTDQVADIMTKAVKREVF 1249
>At3g25450 hypothetical protein
Length = 1343
Score = 593 bits (1528), Expect = e-169
Identities = 362/1046 (34%), Positives = 554/1046 (52%), Gaps = 64/1046 (6%)
Query: 569 HQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTI-----GVDNSPC 623
+ +WYLD+G S HMTG R F +L G+V FG + I G G+I G +
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKIL 348
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKR-RNNTYKIRL 682
D V + L N+LS+ Q + G DI + + +G++L ++R RN YK+
Sbjct: 349 FD-VYYIPDLKSNILSLGQATESGCDIRMREDYL-TLHDREGNLLIKAQRSRNRLYKV-- 404
Query: 683 SELETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSDALCEAC 735
LE + KCL L+ E +WH RLGH S M K +LV G+ + C +C
Sbjct: 405 -SLEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSC 463
Query: 736 QKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFL 795
GK + F ++ LEL+H DL G + + KRY V++DD+S + W L
Sbjct: 464 LFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILL 523
Query: 796 SRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTH 855
K E+ F F A V+ E G I R+D GGEF + +F+ GI + P T
Sbjct: 524 KEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTP 583
Query: 856 QQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWK 915
QQNGV+ER+NRTL M R++L+ +M + W EAV + Y+ NR+ R + N+TPYE++K
Sbjct: 584 QQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFK 643
Query: 916 KIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEEC 975
KPN + FGCV YA L K D +S + LG SK +R+ + + I
Sbjct: 644 HKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVS 703
Query: 976 IHVRFD--------------DKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP------- 1014
V FD DK + + +F + + +D PEE E
Sbjct: 704 RDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGED 763
Query: 1015 ----EEDSLEEVGLSDSQPQKKSR-----IVASHPKELILGIKDEPV*TRSAFRPSEETL 1065
EE EE S +PQ R I ++ K+ +L + E +E L
Sbjct: 764 ENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIE----------AEHLL 813
Query: 1066 LSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFR 1125
L++ EP EA + K+W +EE+ KN W+LV P G +G KWVF+
Sbjct: 814 LAVND-----EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFK 868
Query: 1126 NKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMD 1185
K N G + + KARLVA+G Q+ G+D+ E FA VAR+E +RL+I+ + ++ +H +D
Sbjct: 869 LKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLD 928
Query: 1186 VKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNE 1245
VK+AFL+G + E+VYV QP GF ++++ + V+KL K+LYGL+QAPRAW +L+ L + +
Sbjct: 929 VKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELK 988
Query: 1246 FVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKY 1305
F + + +L+ K ++I + +YVDD++ +N + F + M + EMS +G+L Y
Sbjct: 989 FEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTY 1048
Query: 1306 FLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIY 1365
+LGI+V Q + + Q +Y K++L++ M K TPM + L K ++ + Y
Sbjct: 1049 YLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDY 1108
Query: 1366 RGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTS 1425
R IG L YL +RPD+ ++V + +R+ +PRE+H A+K+I RYL+GTT+ GL +KK
Sbjct: 1109 RRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGE 1168
Query: 1426 EYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICS 1485
L GY D+ + D + KST G+ +L ++W S++Q ++ LS EAE+++A +
Sbjct: 1169 NAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAA 1228
Query: 1486 TQMLWTKHQLEDYQILE-SNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KG 1544
Q +W + L + E + I DN +AI+L+KNP+ H R+KHI +YHFIR+ V G
Sbjct: 1229 KQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENG 1288
Query: 1545 VLLLKFVDTDHQWANIFTKPLADDRF 1570
+ ++ V Q A+I TK L +F
Sbjct: 1289 QIEVEHVPGVRQKADILTKALGKIKF 1314
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 591 bits (1524), Expect = e-168
Identities = 362/1023 (35%), Positives = 521/1023 (50%), Gaps = 121/1023 (11%)
Query: 568 KHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGV----DNSPC 623
++ WYLDSG S HM G + MF EL G V G K ++ G G I + +
Sbjct: 331 ENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQF 390
Query: 624 IDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLS 683
I NV + + N+LS+ QL +KGYDI D ++ K N K+ +S
Sbjct: 391 ISNVYYIPSMKTNILSLGQLLEKGYDIRLK----------DNNLSIRDKESNLITKVPMS 440
Query: 684 E-------LETQKVKCL-LSVNEEQWVWHRRLGHAS------MSKLDLVRGLPTLKFSSD 729
+ + +CL + EE W+WH R GH + +S+ ++VRGLP + +
Sbjct: 441 KNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQ 500
Query: 730 ALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCW 789
+CE C G K+ F ++ +PLEL+H D+ G +K +S+G Y ++ +DD+S
Sbjct: 501 -VCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRK 559
Query: 790 TWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDF 849
TWV FL K E +F F A V+ E G I +RSD GGEF + +F + GI
Sbjct: 560 TWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQL 619
Query: 850 SCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKT 909
+ PR+ QQNGV ERKNRT+ EMAR+ML+ + K WAEAV Y+ NR + + KT
Sbjct: 620 TVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKT 679
Query: 910 PYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDA 969
P E W KP S+ FG + +A ++ +K D KS K + +GY + SKG+++YN D
Sbjct: 680 PQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDT 739
Query: 970 KTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEP-EEDSLEEVGLSDSQ 1028
K ++ FD++ + D + E + DK + E P EE + + SQ
Sbjct: 740 KKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQ 799
Query: 1029 PQKKSRIVASHPKELILGIKDEPV*TRSAFRPSE-ETLLSLKGLVSLIEPKSIDEALQDK 1087
++ S + + + + +E + L+L L + EP EA++ K
Sbjct: 800 IEESSSERTPRFRSI-----------QELYEVTENQENLTLFCLFAECEPMDFQEAIEKK 848
Query: 1088 DWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNS 1147
W M+EE+ KND W L P G +G KWV++ K N KG+V R KARLVA+G S
Sbjct: 849 TWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 908
Query: 1148 QQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGF 1207
Q+ GIDY E FA VARLE +RL+IS + + +HQMDVKSAFLNG + EEVY+ QP G+
Sbjct: 909 QRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 1208 EDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IK 1267
+ D V +LKK LYGLKQAPRAW R+ + + +F++ + L+ K K+DI I
Sbjct: 969 IVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 1268 QIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTK 1327
+YVDD+IF NPS+ +EF + M E EM+ +G + Y+LGI+V Q+ +I Q Y K
Sbjct: 1029 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 1328 ELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVH 1387
E+LKKF M S ++GSL YLT +RPDIL++V
Sbjct: 1089 EVLKKFKMDDSN--------------------------PSLVGSLRYLTCTRPDILYAVG 1122
Query: 1388 LCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKST 1447
+ +R+ P TH A KRI RY+KGT N GL Y TS+YKL C A +
Sbjct: 1123 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV-VCHAIWL--------- 1172
Query: 1448 SGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPI 1507
R + LSL + E + + + L N P+
Sbjct: 1173 -----------------RNLLKELSLPQEEPTKIFVDNKSAI----------ALAKN-PV 1204
Query: 1508 YCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLAD 1567
+ D + KHI+ +YH+IR+ V K + L++V T Q A+IFTKPL
Sbjct: 1205 FHDRS---------------KHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKR 1249
Query: 1568 DRF 1570
+ F
Sbjct: 1250 EDF 1252
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 583 bits (1503), Expect = e-166
Identities = 344/1040 (33%), Positives = 549/1040 (52%), Gaps = 46/1040 (4%)
Query: 567 LKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNSPCIDN 626
L +W +DSG + H++ +R +F L V KI G GT+ +++ + N
Sbjct: 426 LSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKN 485
Query: 627 VLLVDGLNHNLLSISQLADK-GYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSEL 685
VL + NL+SIS L D G +IF++ SC I G +L +R N Y + + +
Sbjct: 486 VLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVGD- 544
Query: 686 ETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVR---GLPTLKFSSDALCEACQKGKFTK 742
++ V ++ ++ +WHRRLGHAS+ +LD + G K C C K K
Sbjct: 545 QSISVNAVVDIS----MWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRK 600
Query: 743 VPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESH 802
+ F N V +LLHID++G E++ G +Y + IVDD+S TW+ L K E
Sbjct: 601 LSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEVL 659
Query: 803 SVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIE 862
+VF FI QV+N+ ++ VRSD+ E KF S + GI SCP T +QN V+E
Sbjct: 660 TVFPAFIQQVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNSVVE 716
Query: 863 RKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFS 922
RK++ + +AR ++ ++ + W + V T ++ NR + ++NKTPYE+ P +
Sbjct: 717 RKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYE 776
Query: 923 YFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDD 982
FGC+CY+ + + HKF +S CL LGY KG+++ + ++ T+ +V+F +
Sbjct: 777 QLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHE 836
Query: 983 KL--------DSDQSKLVEKFADMSINV-SDKGKAPEEAEPEEDSLEEVGLSDSQPQKKS 1033
++ KL +S + SD +P + +SD PQ S
Sbjct: 837 EVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQ--------ISDLPPQISS 888
Query: 1034 RIVASHPKEL-------ILGIKDEPV*TRSAF-RPSEETLLSLKGLVSLIEPKSIDEALQ 1085
+ V P L + P+ + ++ + S + + + + P + EA
Sbjct: 889 QRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQD 948
Query: 1086 DKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQG 1145
K+W ++ E+ K + W + P+G +G KWVF K G++ R KARLVA+G
Sbjct: 949 TKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKG 1008
Query: 1146 NSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPP 1205
+Q+EG+DYT+TF+ VA++ I+LL+ S + + Q+DV +AFLNG + EE+++ P
Sbjct: 1009 YTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPE 1068
Query: 1206 GFEDEKN----PDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYK 1261
G+ + K + V +LK+S+YGLKQA R W+ + SS LL F + D TLF K Y
Sbjct: 1069 GYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYD 1128
Query: 1262 DDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIH 1321
+ I +YVDDI+ S + + + +E + ++ +G+LKYFLG++V + I
Sbjct: 1129 GEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISIC 1188
Query: 1322 QSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKI--YRGMIGSLLYLTASR 1379
Q KY ELL+ M PM P + K+D G + + I YR ++G L+YLT +R
Sbjct: 1189 QRKYALELLQSTGMLACKPVSVPMIPNLKMRKDD--GDLIEDIEQYRRIVGKLMYLTITR 1246
Query: 1380 PDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAG 1439
PDI F+V+ +F S PR THLTA R+ +Y+KGT GL Y +S+ L G+ D+D+A
Sbjct: 1247 PDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWAS 1306
Query: 1440 DRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQ 1499
+ R+ST+ F+G +L+SW SK+Q ++ S AEAEY + A+ + +M+W L Q
Sbjct: 1307 CQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQ 1366
Query: 1500 ILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWAN 1559
+Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L L V T+ Q A+
Sbjct: 1367 ASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVAD 1426
Query: 1560 IFTKPLADDRFNFILKNLNM 1579
I TKPL +F + +++
Sbjct: 1427 ILTKPLFPYQFEHLKSKMSI 1446
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 582 bits (1501), Expect = e-166
Identities = 341/1027 (33%), Positives = 539/1027 (52%), Gaps = 24/1027 (2%)
Query: 567 LKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNSPCIDN 626
L +W +DSG + H++ +R++FQ L V +I G GT+ ++ + N
Sbjct: 437 LSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQN 496
Query: 627 VLLVDGLNHNLLSISQLA-DKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSEL 685
VL + NL+SIS L D G +IF+ C+ G L KR N Y L
Sbjct: 497 VLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYV-----L 551
Query: 686 ETQKVKCLLSVNEEQWVWHRRLGHASMSKLDL---VRGLPTLKFSSDALCEACQKGKFTK 742
+TQ ++ + VWH+RLGH S S+LD V G K A C C K K
Sbjct: 552 DTQSPAISVNAVVDVSVWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKK 611
Query: 743 VPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESH 802
+ F + N + S ELLHID++G E++ G +Y + IVDD+S TW+ L K +
Sbjct: 612 LSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSKSDVL 670
Query: 803 SVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIE 862
+VF FI V+N+ R+ VRSD+ E F + + GI SCP T +QN V+E
Sbjct: 671 TVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETPEQNSVVE 727
Query: 863 RKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFS 922
RK++ + +AR ++ +++M+ +W + V T ++ NR + NKTP+E+ P++S
Sbjct: 728 RKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYS 787
Query: 923 YFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDD 982
FGC+CY+ + + HKF +S C+ LGY KG+++ + ++ + +V F +
Sbjct: 788 QLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHE 847
Query: 983 KL----DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQKKSRIVAS 1038
+L S QS ++ G + P +S + K +
Sbjct: 848 ELFPLASSQQSATTASDVFTPMDPLSSGNSITSHLPSPQISPSTQISKRRITKFPAHLQD 907
Query: 1039 HPKELILGIKDEPV*TRSAFRP-SEETLLSLKGLVSLIEPKSIDEALQDKDWILTMEEEL 1097
+ + P+ + ++ S +L + + + P+S EA K+W +++E+
Sbjct: 908 YHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEI 967
Query: 1098 NQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTET 1157
+ D W + P G +G KWVF K + G + R KAR+VA+G +Q+EG+DYTET
Sbjct: 968 GAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTET 1027
Query: 1158 FALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKN----P 1213
F+ VA++ ++LL+ S + ++Q+D+ +AFLNG + E +Y+ P G+ D K P
Sbjct: 1028 FSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPP 1087
Query: 1214 DHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDD 1273
+ V +LKKS+YGLKQA R W+ + S+ LL F + D TLF + + + +YVDD
Sbjct: 1088 NVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDD 1147
Query: 1274 IIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKF 1333
I+ S + +E ++A ++ +G LKYFLG++V + E + Q KY ELL
Sbjct: 1148 IVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSA 1207
Query: 1334 NMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQ 1393
+M + PM P L K D +++YR ++G L+YLT +RPDI F+V+ +F
Sbjct: 1208 DMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFS 1267
Query: 1394 SDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQF 1453
S PR HL AV ++ +Y+KGT GL Y + L GY DAD+ R+ST+G F
Sbjct: 1268 SAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMF 1327
Query: 1454 LGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIPI-YCDNT 1512
+GS+L+SW SK+Q ++ S AEAEY + A+ S +M W L ++ S +PI Y D+T
Sbjct: 1328 VGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRV-HSGVPILYSDST 1386
Query: 1513 AAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNF 1572
AA+ ++ NP+ H R KHIE+ H +R+ + G L L V T Q A+I TKPL +F
Sbjct: 1387 AAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAH 1446
Query: 1573 ILKNLNM 1579
+L +++
Sbjct: 1447 LLSKMSI 1453
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 558 bits (1437), Expect = e-158
Identities = 339/1018 (33%), Positives = 537/1018 (52%), Gaps = 39/1018 (3%)
Query: 571 SWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNS----PCIDN 626
SWYLD+G S HMTG + F +L G+V FG + + I G G+I + + +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 627 VLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKR-RNNTYKIRLSEL 685
V + L N++S+ Q + G D+ + +G +L + R RN YK+ +L
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQL-TLHDREGCLLLRATRSRNRLYKV---DL 394
Query: 686 ETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGLPTLKFSSDALCEACQKGKFTKVPF 745
+ VKCL +L A+M + +LV G+ + + C +C GK + PF
Sbjct: 395 NVENVKCL------------QLEAATMVRKELVIGISNIPKEKET-CGSCLLGKQARQPF 441
Query: 746 KAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESHSVF 805
S+ LEL+H DL G + + KRY +V++DD++ + W L K E+ F
Sbjct: 442 PKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEAFEKF 501
Query: 806 STFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIERKN 865
F +V+ E G +I R+D GGEF + +F+ GI + P T QQNGV+ER+N
Sbjct: 502 RDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRN 561
Query: 866 RTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKKIKPNFSYFH 925
RTL M R++L+ M + W EAV + YI NR+ R + N+TPYE++K+ KPN +
Sbjct: 562 RTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLR 621
Query: 926 PFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYN-TDAKTIEECIHVRFDDKL 984
FGC+ YA L K D +S + LG SK +R+ + T+ K I+ +
Sbjct: 622 VFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSETRDI 681
Query: 985 DSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQKKSRIVASHPKELI 1044
S + +F + I SD + + E E+S EE G ++ Q++ + P
Sbjct: 682 SGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEETQPSHAT 741
Query: 1045 LGIKDEPV*TRSAFRPSEETLLSLKGLVSLIEPKSIDEALQD-----------KDWILTM 1093
P RS + + L L++ IE + + A+ D K+W
Sbjct: 742 ----PLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEANKLKEWRDAC 797
Query: 1094 EEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGID 1153
+EE+ KN W+L+ P ++G KWVF+ K N G + + KARLVA+G Q+ GID
Sbjct: 798 KEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGID 857
Query: 1154 YTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNP 1213
Y E FA VAR+E IR++I+ + ++ VH +DVK+AFL+G + E+VYV QP GF ++ N
Sbjct: 858 YDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNE 917
Query: 1214 DHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDD 1273
V+KL K+LYGLKQAPRAW +L+ L + FV+ + +++ + + + I IYVDD
Sbjct: 918 GKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDD 977
Query: 1274 IIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKF 1333
++ ++ L F + M + EMS +G+L Y+LGI+V + + Q +Y +++++
Sbjct: 978 LLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEA 1037
Query: 1334 NMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQ 1393
M PM L K + ++ YR MIG L Y+ +RPD+ + V + +R+
Sbjct: 1038 GMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYL 1097
Query: 1394 SDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQF 1453
PRE+H A+K++ RYLKGT + GL K+ + L GY D+ ++ D + KST+G+ +
Sbjct: 1098 QQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFY 1157
Query: 1454 LGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQL-EDYQILESNIPIYCDNT 1512
L ++W S++Q ++ALS EAE+++A + Q +W + E + I DN
Sbjct: 1158 LHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNK 1217
Query: 1513 AAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRF 1570
+AI+L+KN + H R+KHI +YHFIR+ V ++ + V Q A+I TKPL +F
Sbjct: 1218 SAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKF 1275
>At1g70010 hypothetical protein
Length = 1315
Score = 541 bits (1395), Expect = e-154
Identities = 334/1000 (33%), Positives = 519/1000 (51%), Gaps = 38/1000 (3%)
Query: 613 SGTIGVDNSPCIDNVLLVDGLNHNLLSISQLADK-GYDIIFNQKSCRAVS*IDGSVLFNS 671
SG++ + +++VL + NLLS+S L G I F++ SC ++
Sbjct: 314 SGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVGMG 373
Query: 672 KRRNNTYKIRLSELE---TQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGL---PTLK 725
K+ N Y + L L T + SV +WH+RLGH S+ KL + L P K
Sbjct: 374 KQVANLYIVDLDSLSHPGTDSSITVASVTSHD-LWHKRLGHPSVQKLQPMSSLLSFPKQK 432
Query: 726 FSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDD 785
++D C C K +PF + N S SRP +L+HID +G ++ G RY + IVDD
Sbjct: 433 NNTDFHCRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDD 491
Query: 786 YSCWTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGI 845
YS TWV L K + +V TF+ V+N+ I VRSD+ E F + S GI
Sbjct: 492 YSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKGI 548
Query: 846 AHDFSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPI 905
SCP T QQN V+ERK++ + +AR++ ++ + +W + + T Y+ NR+ +
Sbjct: 549 VPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPIL 608
Query: 906 LNKTPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIY 965
+K P+E+ K P + + FGC+CYA + HKF ++ C +GY KG+++
Sbjct: 609 EDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLL 668
Query: 966 NTDAKTIEECIHVRFDDKL----DSDQSKLVEKF-------------ADMSINVSDKGKA 1008
+ + +I HV F ++L SD S+ + F + +N SD +
Sbjct: 669 DLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSS 728
Query: 1009 PE---EAEPEEDSLE-EVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEET 1064
E A P + E V S + +K + + + ++ E S R ++
Sbjct: 729 VEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPY 788
Query: 1065 LLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVF 1124
L L L EP + EA + + W M E + W + P +G +W+F
Sbjct: 789 LTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIF 848
Query: 1125 RNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQM 1184
+ K N G V R KARLVAQG +Q+EGIDY ETF+ VA+L +++LL+ + + + Q+
Sbjct: 849 KIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQL 908
Query: 1185 DVKSAFLNGYISEEVYVHQPPGFE----DEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSF 1240
D+ +AFLNG + EE+Y+ P G+ D P+ V +LKKSLYGLKQA R WY + SS
Sbjct: 909 DISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSST 968
Query: 1241 LLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTM 1300
LL F++ D T F K +Y+DDII S N + M++ ++ +
Sbjct: 969 LLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDL 1028
Query: 1301 GELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKV 1360
GELKYFLG+++ + + +I Q KY +LL + + PM P+ + + V
Sbjct: 1029 GELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFV 1088
Query: 1361 CQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLM 1420
YR +IG L+YL +RPDI F+V+ A+F PR+ HL AV +I +Y+KGT GL
Sbjct: 1089 EVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLF 1148
Query: 1421 YKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYIS 1480
Y TSE +L Y +ADY R R+STSG C FLG +L+ W S++Q +++ S AEAEY S
Sbjct: 1149 YSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRS 1208
Query: 1481 AAICSTQMLWTKHQLEDYQI-LESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFIRD 1539
++ + +++W + L++ Q+ L ++CDN AAI ++ N + H R KHIE H +R+
Sbjct: 1209 LSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRE 1268
Query: 1540 YV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
+ KG+ L ++T+ Q A+ FTKPL F+ ++ + +
Sbjct: 1269 RLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGL 1308
>At1g37110
Length = 1356
Score = 522 bits (1344), Expect = e-148
Identities = 337/1062 (31%), Positives = 533/1062 (49%), Gaps = 71/1062 (6%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNS----PCIDNV 627
W LDSGC+ HMT R F + K + G + + G GTI +D ++NV
Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILENV 367
Query: 628 LLVDGLNHNLLSISQLADKGYD---------IIFNQKSCRAVS*IDGSVLFNSKRRNNTY 678
V L NL+S L GY N K+ S +G + + +T
Sbjct: 368 KYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRGSLSNGLYVLDG----STV 423
Query: 679 KIRLSELETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRG---LPTLKFSSDALCEAC 735
L ET KVK L WH RLGH SM+ L ++ G + + + CE C
Sbjct: 424 MSELCNAETDKVKTAL--------WHSRLGHMSMNNLKVLAGKGLIDRKEINELEFCEHC 475
Query: 736 QKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVK-TESIGGKRYGMVIVDDYSCWTWVKF 794
GK KV F S L +H DL+G T SI GK+Y + I+DD + W+ F
Sbjct: 476 VMGKSKKVSFNVGKHTSEDA-LSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYF 534
Query: 795 LSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRT 854
L KDE+ F + + V+N+ ++ +R+D+G EF N +F+S +GI +C T
Sbjct: 535 LKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYT 594
Query: 855 HQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELW 914
QQNGV ER NRT+ E R +L ++ + + FWAEA T Y+ NR I + P E+W
Sbjct: 595 PQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMW 654
Query: 915 KKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAK---- 970
KP + + FG + Y ++ +L ++ K LGY +KG++++ + +
Sbjct: 655 LNRKPGYKHLRKFGSIAYVHQDQGKLKP---RALKGFFLGYPAGTKGYKVWLLEEEKCVI 711
Query: 971 ---------TIEECIHVRFDDKLDSDQSKLVE------KFADMS-----INVSDKGKAPE 1010
+ + V+ DD + +Q + KFA+ S I + +
Sbjct: 712 SRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPIT 771
Query: 1011 EAEPEEDSLEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLLSLKG 1070
E E DS EEV S+ + R + K L + + F +L
Sbjct: 772 EGEQSSDSEEEVEYSEKTQETPKRTGLTTYK-LARDRVRRNINPPTRFTEESSVTFALVV 830
Query: 1071 LVSLI--EPKSIDEALQDKD---WILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFR 1125
+ + I EP+S EA++ +D W + +E++ KN W+LV KP+ I+G +W+F+
Sbjct: 831 VENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFK 890
Query: 1126 NKLNEKG-DVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQM 1184
K G + R KARLVA+G +Q+EG+DY E FA V + +IR+L+S V+ ++ + QM
Sbjct: 891 LKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQM 950
Query: 1185 DVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDN 1244
DVK+ FL+G + EE+Y+ QP GF + + + V +LKKSLYGLKQ+PR W R F+
Sbjct: 951 DVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQ 1010
Query: 1245 EFVRGKVDTTLFCKTYKD-DI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGEL 1303
+F+R + D ++ K + D +YVDD++ A+ + E + E EM MG
Sbjct: 1011 QFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGA 1070
Query: 1304 KYFLGIQV--DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPM---HPTCILEKEDVSG 1358
LGI + D+K + Q Y +++L +FNM + + P+ + +ED
Sbjct: 1071 SRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREEDECV 1130
Query: 1359 KVCQKIYRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNL 1417
Y +GS++Y + +RPD+ +++ L +R+ S P H AVK + RYLKG +L
Sbjct: 1131 DTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDL 1190
Query: 1418 GLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAE 1477
L++ K ++ ++GYCD++YA D R+S SG +G N VSW + Q ++A+S EAE
Sbjct: 1191 NLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAE 1250
Query: 1478 YISAAICSTQMLWTKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYHFI 1537
YI+ A + + +W K L+D + + + I+CD+ +AI LSKN + H R KHI+V++++I
Sbjct: 1251 YIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYI 1310
Query: 1538 RDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
RD V G + + + T + TK + ++F L L +
Sbjct: 1311 RDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVLKL 1352
>At4g17450 retrotransposon like protein
Length = 1433
Score = 495 bits (1275), Expect = e-140
Identities = 310/1054 (29%), Positives = 520/1054 (48%), Gaps = 80/1054 (7%)
Query: 557 SILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTI 616
S+ Q ++P + W +DSG + H+T R ++ + V + KI G G I
Sbjct: 420 SVSQEPAVSP---RGWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFI 476
Query: 617 GVDNSPCIDNVLLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNN 676
+ ++ + NVL + NL+S + +++ + S + + + N+
Sbjct: 477 QLSDAISLHNVLYIPEFKFNLIS-----ELTKELMIGRGSQ-----VGNLYVLDFNENNH 526
Query: 677 TYKIRLSELETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGLPTLKFSSDA------ 730
T ++ + + SV + WH+RLGH + SK+DL+ + LK
Sbjct: 527 TVSLKGTTSMCPEFSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPV 586
Query: 731 --LCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSC 788
+C C K + F+++ + S +L+HID +G +
Sbjct: 587 CHVCHVCHLSKQKHLSFQSRQNMC-SAAFDLVHIDTWGPFSVPTNDA------------- 632
Query: 789 WTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHD 848
TW+ L K + VF FI V + ++ VRSD+ E KF LF ++GI
Sbjct: 633 -TWIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHEL---KFTDLFAAHGIVAY 688
Query: 849 FSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNK 908
SCP T +QN V+ERK++ + +AR +L ++++ FW + V T ++ NR+ + NK
Sbjct: 689 HSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNK 748
Query: 909 TPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTD 968
+PYE K I P + FGC+CY+ + + HKF+ ++ C+ LGY KG+++ + +
Sbjct: 749 SPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIE 808
Query: 969 AKTIEECIHVRFDDKLDSDQSKLVEKFADMSINVSDKGKAPEEAEPEEDSLEEVGLSDSQ 1028
+ HV F + + F +S + D + + L+ +D
Sbjct: 809 THAVSISRHVIFHEDI----------FPFISSTIKD------DIKDFFPLLQFPARTDDL 852
Query: 1029 PQKKSRIVASHPKELILGIKD----EPV*TRSAFRP------------SEETLLSLKGLV 1072
P +++ I+ +HP + + K +P+ R P +E + +
Sbjct: 853 PLEQTSIIDTHPHQDVSSSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPFHAFINNIT 912
Query: 1073 SLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKG 1132
+ + P+ EA K W M+EE+ + + W++V P +G KWVF K N G
Sbjct: 913 NAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADG 972
Query: 1133 DVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLN 1192
+ R KARLVA+G +Q+EG+DY ETF+ VA+L ++R+++ + VHQ+D+ +AFLN
Sbjct: 973 SIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLN 1032
Query: 1193 GYISEEVYVHQPPGFED---EKNPDH-VFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVR 1248
G + EE+Y+ PPG+ D E P H + +L KS+YGLKQA R WY +LS+ L F +
Sbjct: 1033 GDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQK 1092
Query: 1249 GKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLG 1308
D TLF K + +YVDDI+ S + +F+ +++ ++ +G KYFLG
Sbjct: 1093 SNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLG 1152
Query: 1309 IQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGM 1368
I++ + + I Q KY ELL S + P+ P+ L KED YR +
Sbjct: 1153 IEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKL 1212
Query: 1369 IGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYK 1428
+G L+YL +RPDI ++V+ +F P HL+AV ++ RYLKGT GL Y ++
Sbjct: 1213 VGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFD 1272
Query: 1429 LSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQM 1488
L GY D+D+ R+ + C F+G LVSW SK+Q +++S AEAE+ + + + +M
Sbjct: 1273 LRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEM 1332
Query: 1489 LWTKHQLEDYQILESNIP---IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGV 1545
+W +D+++ IP +YCDNTAA+ + N + H R K +E+ + R+ V G
Sbjct: 1333 IWLSRLFDDFKV--PFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGF 1390
Query: 1546 LLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
L FV+T Q A+ TK + +F+ ++ + +
Sbjct: 1391 LKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGV 1424
>At4g21360 putative transposable element
Length = 1308
Score = 447 bits (1149), Expect = e-125
Identities = 318/1064 (29%), Positives = 513/1064 (47%), Gaps = 122/1064 (11%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGGEVGFGGNEKGKIVGSGTIGVDNSP----CIDNV 627
W +DSGC+ HMT F E + G + + GSGT+ V+ + NV
Sbjct: 309 WVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGGSIRVLKNV 368
Query: 628 LLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKRR--------NNTYK 679
V L NL+S L GY DG V F + + N Y
Sbjct: 369 RFVPNLRRNLISTGTLDKLGYKHEGG----------DGKVRFYKENKTALCGNLVNGLYV 418
Query: 680 IRLSELETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLV--RGLPTLKFSSD-ALCEACQ 736
+ + + S NE+ +WH RLGH S++ + ++ +GL K + + CE C
Sbjct: 419 LDGHTVVNENCNVEGS-NEKTELWHCRLGHMSLNNMKILAEKGLLEKKDIKELSFCENCV 477
Query: 737 KGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLS 796
GK K+ F + T L +H DL+G K+Y + I+DD S W+ FL
Sbjct: 478 MGKSKKLSFNVGKHI-TDEVLGYIHADLWG---------KQYFLSIIDDKSRKVWLMFLK 527
Query: 797 RKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQ 856
KDE+ F + V+N+ ++ +R+D+G EF N KF+ GI +C T Q
Sbjct: 528 TKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQ 587
Query: 857 QNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNKTPYELWKK 916
QNGV +R NRTL E R +L E+ + + FWAEA T Y+ NR + + P ELW
Sbjct: 588 QNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWLD 647
Query: 917 IKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECI 976
KP + + FGC+ Y ++ +L ++ K + LGY +KG++++ D E+C+
Sbjct: 648 KKPGYKHLRRFGCIAYVHLDQGKL---KPRALKGVFLGYPQGTKGYKVWLLDE---EKCV 701
Query: 977 ----------HVRFDDKLDSDQS----KLVEKFADMSINVSDKGKAP-------EEAEPE 1015
V D + S+QS +E + + ++V + G+ EE + E
Sbjct: 702 ISRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQE 761
Query: 1016 EDS---------LEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAFRPSEETLL 1066
DS + + LS+ Q + A +P + + + A +EE
Sbjct: 762 SDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFAL----ALVMAEE--- 814
Query: 1067 SLKGLVSLIEPKSIDEALQDKDWIL---TMEEELNQFSKNDVWNLVKKPQGVHILGTKWV 1123
+ EP+ +A +DK WI M+EE++ KN W++V+ P+ ++ +W+
Sbjct: 815 -----IESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWL 869
Query: 1124 FRNKLNEKG-DVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVH 1182
F+ K G + R KARLVA+G +QQ+GIDY E FA V + +IR+L+S V ++ +
Sbjct: 870 FKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELE 929
Query: 1183 QMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLL 1242
QMDVK+ FL+G + + +Y+ QP GFE D V LKKSLYGLKQAPR W + +F+L
Sbjct: 930 QMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFML 989
Query: 1243 DNEFVRGKVDTTLFCKTYK-DDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMG 1301
+F R + D+ ++ K + +YVDD++ + + S + E + + EM MG
Sbjct: 990 SLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMG 1049
Query: 1302 ELKYFLGIQV--DQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEK-EDVSG 1358
LGI + ++K + Q++Y +++++F M + + TPM L D G
Sbjct: 1050 AASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIG 1109
Query: 1359 KVCQKI--YRGMIGSLLY-LTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTT 1415
V ++ Y +GS++Y + + PD+ +++ L +RF S P
Sbjct: 1110 SVDPEVVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP------------------- 1150
Query: 1416 NLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAE 1475
+ ++ GYCD+D+A D +R+S SG +G N VSW S Q ++ALS +
Sbjct: 1151 --------GANLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQ 1202
Query: 1476 AEYISAAICSTQMLWTKHQLEDYQILESNIPIYCDNTAAISLSKNPILHSRAKHIEVKYH 1535
AE+I+ + +W + LED + ++CD+ +AI LSKN H R KH+EVK++
Sbjct: 1203 AEFIALTEAVKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFY 1262
Query: 1536 FIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNM 1579
FIRD + G + ++ + T A++ TK + +F L L +
Sbjct: 1263 FIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFEEALDVLKL 1306
>At1g59265 polyprotein, putative
Length = 1466
Score = 369 bits (947), Expect = e-102
Identities = 206/503 (40%), Positives = 294/503 (57%), Gaps = 3/503 (0%)
Query: 1076 EPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQG-VHILGTKWVFRNKLNEKGDV 1134
EP++ +AL+D+ W M E+N N W+LV P V I+G +W+F K N G +
Sbjct: 955 EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1014
Query: 1135 VRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGY 1194
R KARLVA+G +Q+ G+DY ETF+ V + +IR+++ +V+ + + Q+DV +AFL G
Sbjct: 1015 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1074
Query: 1195 ISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTT 1254
++++VY+ QPPGF D+ P++V KL+K+LYGLKQAPRAWY L ++LL FV DT+
Sbjct: 1075 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1134
Query: 1255 LFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQK 1314
LF I +YVDDI+ +P+L + + + EL YFLGI+ +
Sbjct: 1135 LFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRV 1194
Query: 1315 PEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLY 1374
P ++ Q +Y +LL + NM + TPM P+ L + YRG++GSL Y
Sbjct: 1195 PTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQY 1254
Query: 1375 LTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCD 1434
L +RPDI ++V+ ++F P E HL A+KRI RYL GT N G+ KK + L Y D
Sbjct: 1255 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1314
Query: 1435 ADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQ 1494
AD+AGD+ + ST+G +LG + +SW+SK+Q + S EAEY S A S++M W
Sbjct: 1315 ADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1374
Query: 1495 LEDYQILESNIP-IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDT 1553
L + I + P IYCDN A L NP+ HSR KHI + YHFIR+ V G L + V T
Sbjct: 1375 LTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVST 1434
Query: 1554 DHQWANIFTKPLADDRF-NFILK 1575
Q A+ TKPL+ F NF K
Sbjct: 1435 HDQLADTLTKPLSRTAFQNFASK 1457
Score = 170 bits (430), Expect = 7e-42
Identities = 122/434 (28%), Positives = 199/434 (45%), Gaps = 19/434 (4%)
Query: 561 ISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGE---VGFGGNEKGKIVGSGTIG 617
++L +P +W LDSG + H+T + + GG+ V G GS ++
Sbjct: 320 LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 379
Query: 618 VDNSPC-IDNVLLVDGLNHNLLSISQLAD-KGYDIIFNQKSCRAVS*IDGSVLFNSKRRN 675
+ P + N+L V ++ NL+S+ +L + G + F S + G L K ++
Sbjct: 380 TKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 439
Query: 676 NTYKIRLSELETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGL-------PTLKFSS 728
Y+ ++ + + S WH RLGH + S L+ V P+ KF S
Sbjct: 440 ELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLS 499
Query: 729 DALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSC 788
C C K KVPF +++ ++++RPLE ++ D++ S RY ++ VD ++
Sbjct: 500 ---CSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTR 554
Query: 789 WTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHD 848
+TW+ L +K + F TF ++N RI SD+GGEF F +GI+H
Sbjct: 555 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHL 612
Query: 849 FSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNK 908
S P T + NG+ ERK+R + E T+L + K +W A Y+ NR+ + +
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLE 672
Query: 909 TPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTD 968
+P++ PN+ FGC CY HK D KS +C+ LGYS + +
Sbjct: 673 SPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQ 732
Query: 969 AKTIEECIHVRFDD 982
+ HVRFD+
Sbjct: 733 TSRLYISRHVRFDE 746
>At1g58889 polyprotein, putative
Length = 1466
Score = 367 bits (943), Expect = e-101
Identities = 205/503 (40%), Positives = 293/503 (57%), Gaps = 3/503 (0%)
Query: 1076 EPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQG-VHILGTKWVFRNKLNEKGDV 1134
EP++ +AL+D+ W M E+N N W+LV P V I+G +W+F K N G +
Sbjct: 955 EPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSL 1014
Query: 1135 VRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGY 1194
R KAR VA+G +Q+ G+DY ETF+ V + +IR+++ +V+ + + Q+DV +AFL G
Sbjct: 1015 NRYKARFVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1074
Query: 1195 ISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTT 1254
++++VY+ QPPGF D+ P++V KL+K+LYGLKQAPRAWY L ++LL FV DT+
Sbjct: 1075 LTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTS 1134
Query: 1255 LFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQK 1314
LF I +YVDDI+ +P+L + + + EL YFLGI+ +
Sbjct: 1135 LFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRV 1194
Query: 1315 PEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLY 1374
P ++ Q +Y +LL + NM + TPM P+ L + YRG++GSL Y
Sbjct: 1195 PTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQY 1254
Query: 1375 LTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCD 1434
L +RPDI ++V+ ++F P E HL A+KRI RYL GT N G+ KK + L Y D
Sbjct: 1255 LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSD 1314
Query: 1435 ADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQ 1494
AD+AGD+ + ST+G +LG + +SW+SK+Q + S EAEY S A S++M W
Sbjct: 1315 ADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1374
Query: 1495 LEDYQILESNIP-IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDT 1553
L + I + P IYCDN A L NP+ HSR KHI + YHFIR+ V G L + V T
Sbjct: 1375 LTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVST 1434
Query: 1554 DHQWANIFTKPLADDRF-NFILK 1575
Q A+ TKPL+ F NF K
Sbjct: 1435 HDQLADTLTKPLSRTAFQNFASK 1457
Score = 170 bits (430), Expect = 7e-42
Identities = 122/434 (28%), Positives = 199/434 (45%), Gaps = 19/434 (4%)
Query: 561 ISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGE---VGFGGNEKGKIVGSGTIG 617
++L +P +W LDSG + H+T + + GG+ V G GS ++
Sbjct: 320 LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 379
Query: 618 VDNSPC-IDNVLLVDGLNHNLLSISQLAD-KGYDIIFNQKSCRAVS*IDGSVLFNSKRRN 675
+ P + N+L V ++ NL+S+ +L + G + F S + G L K ++
Sbjct: 380 TKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKD 439
Query: 676 NTYKIRLSELETQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGL-------PTLKFSS 728
Y+ ++ + + S WH RLGH + S L+ V P+ KF S
Sbjct: 440 ELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLS 499
Query: 729 DALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSC 788
C C K KVPF +++ ++++RPLE ++ D++ S RY ++ VD ++
Sbjct: 500 ---CSDCLINKSNKVPF-SQSTINSTRPLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTR 554
Query: 789 WTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHD 848
+TW+ L +K + F TF ++N RI SD+GGEF F +GI+H
Sbjct: 555 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHL 612
Query: 849 FSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNK 908
S P T + NG+ ERK+R + E T+L + K +W A Y+ NR+ + +
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLE 672
Query: 909 TPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTD 968
+P++ PN+ FGC CY HK D KS +C+ LGYS + +
Sbjct: 673 SPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQ 732
Query: 969 AKTIEECIHVRFDD 982
+ HVRFD+
Sbjct: 733 TSRLYISRHVRFDE 746
>At4g27210 putative protein
Length = 1318
Score = 364 bits (934), Expect = e-100
Identities = 201/590 (34%), Positives = 324/590 (54%), Gaps = 21/590 (3%)
Query: 999 SINVSDKGKAPEEAEPEEDSLEEVGLSDSQPQKKSRIVASHPKELILGIKDEPV*TRSAF 1058
S ++ D + + E+++++ ++ Q + + P+ TR+
Sbjct: 648 SASIGDSSHSSQAGSDSEETIQQASVNVHQTHASTNV--------------HPMVTRAKV 693
Query: 1059 RPSEET--LLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVH 1116
S+ + L VS EPK++ AL+ W M EE+ S+ W+LV +H
Sbjct: 694 GISKPNPRYVFLSHKVSYPEPKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMH 753
Query: 1117 ILGTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVN 1176
+LG+KWVFR KL+ G + + KAR+VA+G Q+EGIDY ET++ V R +RL++ +
Sbjct: 754 VLGSKWVFRTKLHADGTLNKLKARIVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATA 813
Query: 1177 HNIIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGR 1236
N + QMDVK+AFL+G + E VY+ QP GF D PDHV L KS+YGLKQ+PRAW+ +
Sbjct: 814 LNWDIKQMDVKNAFLHGDLKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDK 873
Query: 1237 LSSFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELE 1296
S+FLL+ F K D +LF + +++ + +YVDD++ + + E
Sbjct: 874 FSTFLLEFGFFCSKSDPSLFIYAHNNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEFR 933
Query: 1297 MSTMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTC--ILEKE 1354
M+ MG+L YFLGIQV ++ ++ Q KY ++LL +M+ T TP+ + +E
Sbjct: 934 MTDMGQLHYFLGIQVQRQQNGLFMSQQKYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQE 993
Query: 1355 DVSGKVCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGT 1414
++ +R + G L YLT +RPDI F+V+ + P + +KRI RY+KGT
Sbjct: 994 ELFSD--PTYFRSIAGKLQYLTLTRPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGT 1051
Query: 1415 TNLGLMYKKTSEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLA 1474
+G+ Y + S L Y D+D+ + R+S G C F+G+NLVSW+SK+ ++ S
Sbjct: 1052 ITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSST 1111
Query: 1475 EAEYISAAICSTQMLWTKHQLEDYQILESNIP-IYCDNTAAISLSKNPILHSRAKHIEVK 1533
EAEY S + ++++LW L + +I + P ++CDN +A+ L+ NP H+R KH ++
Sbjct: 1112 EAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAVYLTANPAFHARTKHFDID 1171
Query: 1534 YHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNMDFCP 1583
+HF+R+ V L++K + Q A+IFTK L + F + L + P
Sbjct: 1172 FHFVRERVALKALVVKHIPGSEQIADIFTKSLPYEAFIHLRGKLGVTLSP 1221
Score = 147 bits (372), Expect = 4e-35
Identities = 113/419 (26%), Positives = 179/419 (41%), Gaps = 46/419 (10%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGGE---VGFGGNEKGKIVGSGTIGVDNSPC-IDNV 627
W DS + H+T R Q+ + G + V G GS + + + +V
Sbjct: 177 WLPDSAATAHVTNSPRSLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASSSGTVPLTDV 236
Query: 628 LLVDGLNHNLLSISQLA-DKGYDIIFNQKSCRAVS*IDGSVLFNSKRRNNTYKIRLSELE 686
L+ + +LLS+S+L D + F R +L R+ Y ++ + +
Sbjct: 237 LVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGSNRDGLYCLK-DDKQ 295
Query: 687 TQKVKCLLSVNEEQWVWHRRLGHASMSKLDLVRGLPTLKFSSDALCEACQKGKFTKVPFK 746
Q + VWHRRLGH L
Sbjct: 296 FQAFFSTRQRSASDEVWHRRLGHPHPQIL------------------------------- 324
Query: 747 AKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLSRKDESHSVFS 806
+PLE +H DL+G S+ G RY V +D YS ++W+ L K + +++F
Sbjct: 325 --------QPLERVHCDLWGPTTITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFL 376
Query: 807 TFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQQNGVIERKNR 866
F V+N+ +I + D GGEF + KF S+GI SCP T QQNG+ ERK+R
Sbjct: 377 AFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSCPHTPQQNGLAERKHR 436
Query: 867 TLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPILNK-TPYELWKKIKPNFSYFH 925
L E+ +ML ++ + FW EA T ++ N + + +PYE KP+++
Sbjct: 437 HLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISPYEKLYDKKPDYTSLR 496
Query: 926 PFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEECIHVRFDDKL 984
FG C+ +KF+ S KC+ LGY+++ KG+R + HV FD+ +
Sbjct: 497 SFGSACFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPTGRLYISRHVIFDESV 555
>At4g10690 retrotransposon like protein
Length = 1515
Score = 364 bits (934), Expect = e-100
Identities = 192/496 (38%), Positives = 285/496 (56%), Gaps = 3/496 (0%)
Query: 1076 EPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHILGTKWVFRNKLNEKGDVV 1135
EPKS+ EAL+D+ W M EE+ + D W+LV +LG KWVF+ KLN G +
Sbjct: 919 EPKSVKEALKDEGWTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSDGSLD 978
Query: 1136 RNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHNIIVHQMDVKSAFLNGYI 1195
R KARLVA+G Q+EG+DY ET++ V R +R ++ + + + Q+DVK+AFL+ +
Sbjct: 979 RLKARLVARGYEQEEGVDYVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHDEL 1038
Query: 1196 SEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLSSFLLDNEFVRGKVDTTL 1255
E V++ QPPGFED PD+V KLKK++Y LKQAPRAW+ + SS+LL F+ D +L
Sbjct: 1039 KETVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSL 1098
Query: 1256 FCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMSTMGELKYFLGIQVDQKP 1315
F D+ +YVDD+I N L ++ ++ E M MG L YFLGIQ
Sbjct: 1099 FVYLKGRDVMFLLLYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQAHYHN 1158
Query: 1316 EATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSGKVCQKIYRGMIGSLLYL 1375
+ ++ Q KYT +LL M + TP+ + + +R + G L YL
Sbjct: 1159 DGLFLSQEKYTSDLLVNAGMSDCSSMPTPLQLDLLQGNNKPFPE--PTYFRRLAGKLQYL 1216
Query: 1376 TASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGTTNLGLMYKKTSEYKLSGYCDA 1435
T +RPDI F+V+ + P + +KRI YLKGT +G+ ++ L Y D+
Sbjct: 1217 TLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSSNTDSVLRCYSDS 1276
Query: 1436 DYAGDRTERKSTSGNCQFLGSNLVSWASKRQSIIALSLAEAEYISAAICSTQMLWTKHQL 1495
D+AG + R+ST G C FLG N++SW++KR ++ S EAEY + + ++++ W L
Sbjct: 1277 DWAGCKDTRRSTGGFCTFLGYNIISWSAKRHPTVSKSSTEAEYRTLSFAASEVSWIGFLL 1336
Query: 1496 EDYQILESNIP-IYCDNTAAISLSKNPILHSRAKHIEVKYHFIRDYV*KGVLLLKFVDTD 1554
++ + + IP +YCDN +A+ LS NP LHSR+KH +V Y+++R+ V G L +K +
Sbjct: 1337 QEIGLPQQQIPEMYCDNLSAVYLSANPALHSRSKHFQVDYYYVRERVALGALTVKHIPAS 1396
Query: 1555 HQWANIFTKPLADDRF 1570
Q A+IFTK L F
Sbjct: 1397 QQLADIFTKSLPQAPF 1412
Score = 195 bits (496), Expect = 2e-49
Identities = 138/428 (32%), Positives = 212/428 (49%), Gaps = 27/428 (6%)
Query: 572 WYLDSGCSRHMTGERRMFQELKLKPGGE-VGFGGNEKGKIVGSGTIGVDNSPC---IDNV 627
W DS + H+T Q + G + V G + I GTI ++ S +++V
Sbjct: 324 WLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQGTLPLEDV 383
Query: 628 LLVDGLNHNLLSISQLADKGYDIIFNQKSCRAVS*IDGSVLFNSKR------RNNTYK-- 679
L+ G+ +LLS+S+L D Y F S SV+ KR + N +K
Sbjct: 384 LVCPGITKSLLSVSKLTDD-YPCSFTFDS--------DSVVIKDKRTQQLLTQGNKHKGL 434
Query: 680 IRLSELETQKVKCLLSVNEEQWVWHRRLGHAS---MSKLDLVRGLPTLKFSSDALCEACQ 736
L ++ Q + + VWH+RLGH + + L + + K SS+ +CEACQ
Sbjct: 435 YVLKDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN-MCEACQ 493
Query: 737 KGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVDDYSCWTWVKFLS 796
GK ++PF A VS SRPLE +H DL+G S G +Y ++ +D+YS +TW L
Sbjct: 494 MGKVCRLPFVASEFVS-SRPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLK 552
Query: 797 RKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYGIAHDFSCPRTHQ 856
K + SVF F V+N+ +I + D GGEF + KF + S GI SCP T Q
Sbjct: 553 LKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQ 612
Query: 857 QNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRPIL-NKTPYELWK 915
QNG+ ER++R L E+ +++ + + W EA T+ ++ N + + NK+PYE+
Sbjct: 613 QNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLH 672
Query: 916 KIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFRIYNTDAKTIEEC 975
P ++ FG CY +KFD KS C+ LGY+++ KG+R + + C
Sbjct: 673 GTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKGYRCLHPPTGKVYIC 732
Query: 976 IHVRFDDK 983
HV FD++
Sbjct: 733 RHVLFDER 740
>At1g53810
Length = 1522
Score = 363 bits (933), Expect = e-100
Identities = 199/539 (36%), Positives = 308/539 (56%), Gaps = 19/539 (3%)
Query: 1059 RPSEETLLSLKGLVSLIEPKSIDEALQDKDWILTMEEELNQFSKNDVWNLVKKPQGVHIL 1118
+P++ +L L VS+ EPK++ EAL+ W M+EE+ + + W LV +++L
Sbjct: 899 KPNKRYVL-LTHKVSIPEPKTVTEALKHPGWNNAMQEEMGNCKETETWTLVPYSPNMNVL 957
Query: 1119 GTKWVFRNKLNEKGDVVRNKARLVAQGNSQQEGIDYTETFALVARLEAIRLLISFSVNHN 1178
G+ WVFR KL+ G + + KARLVA+G Q+EGIDY ET++ V R +RL++ +
Sbjct: 958 GSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETYSPVVRTPTVRLILHVATVLK 1017
Query: 1179 IIVHQMDVKSAFLNGYISEEVYVHQPPGFEDEKNPDHVFKLKKSLYGLKQAPRAWYGRLS 1238
+ QMDVK+AFL+G ++E VY+ QP GF D+ PDHV L KSLYGLKQ+PRAW+ R S
Sbjct: 1018 WELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCLLHKSLYGLKQSPRAWFDRFS 1077
Query: 1239 SFLLDNEFVRGKVDTTLFCKTYKDDI*IKQIYVDDIIFGSANPSLCKEFSEMMQAELEMS 1298
+FLL+ F+ D +LF + +D+ + +YVDD++ N + E M
Sbjct: 1078 NFLLEFGFICSLFDPSLFVYSSNNDVILLLLYVDDMVITGNNSQSLTHLLAALNKEFRMK 1137
Query: 1299 TMGELKYFLGIQVDQKPEATYIHQSKYTKELLKKFNMKKSTIAKTPMHPTCILEKEDVSG 1358
MG++ YFLGIQ+ ++ Q KY ++LL +M + TP+ L+ + VS
Sbjct: 1138 DMGQVHYFLGIQIQTYDGGLFMSQQKYAEDLLITASMANCSPMPTPLP----LQLDRVSN 1193
Query: 1359 K----VCQKIYRGMIGSLLYLTASRPDILFSVHLCARFQSDPRETHLTAVKRIRRYLKGT 1414
+ +R + G L YLT +RPDI F+V+ + P + +KRI RY+KGT
Sbjct: 1194 QDEVFSDPTYFRSLAGKLQYLTLTRPDIQFAVNFVCQKMHQPSVSDFNLLKRILRYIKGT 1253
Query: 1415 TNLGLMYKKT---------SEYKLSGYCDADYAGDRTERKSTSGNCQFLGSNLVSWASKR 1465
++G+ Y S+Y LS Y D+DYA + R+S G C F+G N++SW+SK+
Sbjct: 1254 VSMGIQYNSNSSSVVSAYESDYDLSAYSDSDYANCKETRRSVGGYCTFMGQNIISWSSKK 1313
Query: 1466 QSIIALSLAEAEYISAAICSTQMLWTKHQLEDYQILESNIP-IYCDNTAAISLSKNPILH 1524
Q ++ S EAEY S + ++++ W L + + + P ++CDN +A+ L+ NP H
Sbjct: 1314 QPTVSRSSTEAEYRSLSETASEIKWMSSILREIGVSLPDTPELFCDNLSAVYLTANPAFH 1373
Query: 1525 SRAKHIEVKYHFIRDYV*KGVLLLKFVDTDHQWANIFTKPLADDRFNFILKNLNMDFCP 1583
+R KH +V +H+IR+ V L++K + Q A+IFTK L + F + L +DF P
Sbjct: 1374 ARTKHFDVDHHYIRERVALKTLVVKHIPGHLQLADIFTKSLPFEAFTRLRFKLGVDFPP 1432
Score = 201 bits (511), Expect = 3e-51
Identities = 137/439 (31%), Positives = 216/439 (48%), Gaps = 18/439 (4%)
Query: 556 LSILQISLIAPLKHQSWYLDSGCSRHMTGERRMFQELKLKPGGE---VGFGGNEKGKIVG 612
L+ ++I+ + W DS S H+T R + Q+ + G + V G G
Sbjct: 310 LATMRITDVTDHHGHEWIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITHTG 369
Query: 613 SGTIGVDNSPC-IDNVLLVDGLNHNLLSISQL-ADKGYDIIFNQKSCRAVS*IDGSVLFN 670
SG+I + + VL+ + +LLS+S+L +D + F+ S R +L
Sbjct: 370 SGSIASSSGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVM 429
Query: 671 SKRRNNTYKIRLSELETQKVKCLLSVNEEQW---VWHRRLGHAS---MSKLDLVRGLPTL 724
+ R+ Y LE K++ L S + VWHRRLGHA+ + +L + + +
Sbjct: 430 GRNRDGLYS-----LEEPKLQVLYSTRQNSASSEVWHRRLGHANAEVLHQLASSKSIIII 484
Query: 725 KFSSDALCEACQKGKFTKVPFKAKNVVSTSRPLELLHIDLFGLVKTESIGGKRYGMVIVD 784
+CEAC GK T++PF + + SRPLE +H DL+G T S+ G RY +V +D
Sbjct: 485 NKVVKTVCEACHLGKSTRLPFML-STFNASRPLERIHCDLWGPSPTSSVQGFRYYVVFID 543
Query: 785 DYSCWTWVKFLSRKDESHSVFSTFIAQVQNEKGCRIMRVRSDHGGEFENDKFESLFDSYG 844
YS +TW L K + S F F V+N+ G +I + D GGEF + +F +G
Sbjct: 544 HYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFLKHLQDHG 603
Query: 845 IAHDFSCPRTHQQNGVIERKNRTLQEMARTMLQETDMAKHFWAEAVNTTCYIQNRISIRP 904
I + SCP T QQNG+ ERK+R + E+ +M+ ++ + +W E+ T ++ N +
Sbjct: 604 IQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLKYWLESFFTANFVINLLPTSS 663
Query: 905 I-LNKTPYELWKKIKPNFSYFHPFGCVCYALNNKDRLHKFDSKSSKCLLLGYSDRSKGFR 963
+ N++PY+ P +S FGC CY KFD +S KC+ LGY+++ KG+R
Sbjct: 664 LDNNESPYQKLYGKAPEYSALRVFGCACYPTLRDYASTKFDPRSLKCVFLGYNEKYKGYR 723
Query: 964 IYNTDAKTIEECIHVRFDD 982
I HV FD+
Sbjct: 724 CLYPPTGRIYISRHVVFDE 742
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.351 0.155 0.541
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,235,148
Number of Sequences: 26719
Number of extensions: 1328390
Number of successful extensions: 6793
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6016
Number of HSP's gapped (non-prelim): 312
length of query: 1583
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1470
effective length of database: 8,299,349
effective search space: 12200043030
effective search space used: 12200043030
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 67 (30.4 bits)
Lotus: description of TM0134.20